View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7166_high_3 (Length: 363)

Name: NF7166_high_3
Description: NF7166
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7166_high_3
NF7166_high_3
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-274)||(7050-7344)
[»] chr3 (21 HSPs)
chr3 (285-346)||(26759480-26759541)
chr3 (283-346)||(901085-901148)
chr3 (284-346)||(28958996-28959058)
chr3 (284-346)||(29720395-29720457)
chr3 (284-346)||(34263701-34263763)
chr3 (283-346)||(9484595-9484658)
chr3 (283-346)||(29793375-29793438)
chr3 (283-346)||(42098624-42098687)
chr3 (283-346)||(44781980-44782043)
chr3 (284-346)||(4229185-4229247)
chr3 (284-346)||(48927799-48927861)
chr3 (284-346)||(49076423-49076485)
chr3 (283-343)||(53274995-53275055)
chr3 (283-338)||(2643274-2643329)
chr3 (284-343)||(16434857-16434916)
chr3 (283-346)||(29809344-29809407)
chr3 (295-346)||(38833962-38834013)
chr3 (284-346)||(4945848-4945910)
chr3 (284-346)||(12948040-12948102)
chr3 (295-343)||(32961257-32961305)
chr3 (285-341)||(53055627-53055683)
[»] chr4 (15 HSPs)
chr4 (283-346)||(31657357-31657420)
chr4 (284-346)||(3708253-3708315)
chr4 (283-346)||(31152660-31152723)
chr4 (284-346)||(23605903-23605965)
chr4 (283-346)||(6520434-6520497)
chr4 (283-346)||(8525417-8525480)
chr4 (283-346)||(46608212-46608275)
chr4 (284-346)||(10384848-10384910)
chr4 (284-346)||(43447165-43447227)
chr4 (283-339)||(42185273-42185329)
chr4 (283-346)||(33394076-33394139)
chr4 (284-343)||(55631879-55631938)
chr4 (284-346)||(37667775-37667837)
chr4 (284-346)||(39332831-39332893)
chr4 (284-346)||(40411610-40411672)
[»] scaffold0281 (1 HSPs)
scaffold0281 (284-346)||(13104-13166)
[»] chr1 (16 HSPs)
chr1 (284-346)||(44240519-44240581)
chr1 (290-346)||(40883417-40883473)
chr1 (283-346)||(10124108-10124171)
chr1 (283-346)||(45299317-45299380)
chr1 (284-346)||(29253479-29253541)
chr1 (284-338)||(31932192-31932246)
chr1 (284-346)||(41855727-41855789)
chr1 (284-346)||(2126652-2126714)
chr1 (284-346)||(5606397-5606459)
chr1 (284-346)||(6017455-6017517)
chr1 (284-346)||(8251155-8251217)
chr1 (284-346)||(10100519-10100581)
chr1 (300-346)||(48389082-48389128)
chr1 (300-346)||(49903691-49903737)
chr1 (283-343)||(8048757-8048817)
chr1 (290-346)||(26543874-26543930)
[»] chr2 (14 HSPs)
chr2 (295-346)||(16646257-16646308)
chr2 (284-346)||(41575562-41575624)
chr2 (285-346)||(16127781-16127842)
chr2 (286-346)||(31603417-31603477)
chr2 (284-346)||(8373434-8373496)
chr2 (301-346)||(22718544-22718589)
chr2 (302-346)||(2831725-2831769)
chr2 (286-346)||(7724612-7724672)
chr2 (283-346)||(12208988-12209051)
chr2 (283-346)||(16126083-16126146)
chr2 (283-346)||(16333479-16333542)
chr2 (283-346)||(20682653-20682716)
chr2 (284-346)||(8896271-8896333)
chr2 (283-343)||(10333582-10333642)
[»] chr6 (12 HSPs)
chr6 (284-346)||(2667331-2667393)
chr6 (284-346)||(17496324-17496386)
chr6 (284-346)||(30699261-30699323)
chr6 (283-346)||(24798552-24798615)
chr6 (284-346)||(29795451-29795513)
chr6 (284-346)||(2397770-2397832)
chr6 (284-346)||(2656676-2656738)
chr6 (300-346)||(10109417-10109463)
chr6 (284-346)||(16661608-16661670)
chr6 (284-346)||(31708893-31708955)
chr6 (284-346)||(32541483-32541545)
chr6 (301-343)||(32673765-32673807)
[»] chr5 (15 HSPs)
chr5 (284-346)||(41263131-41263193)
chr5 (283-343)||(30721690-30721750)
chr5 (287-346)||(14057711-14057770)
chr5 (284-346)||(1098175-1098237)
chr5 (284-346)||(14633007-14633069)
chr5 (284-346)||(27675540-27675602)
chr5 (284-346)||(33402593-33402655)
chr5 (283-339)||(9936897-9936953)
chr5 (283-346)||(10465297-10465360)
chr5 (283-346)||(20040417-20040480)
chr5 (283-346)||(40079980-40080043)
chr5 (284-346)||(1781147-1781209)
chr5 (284-346)||(40316818-40316880)
chr5 (284-346)||(41410661-41410723)
chr5 (290-346)||(30211743-30211799)
[»] chr8 (11 HSPs)
chr8 (283-346)||(43184778-43184841)
chr8 (284-343)||(44887717-44887776)
chr8 (284-346)||(37094132-37094194)
chr8 (283-346)||(14378685-14378748)
chr8 (283-346)||(23547067-23547130)
chr8 (283-346)||(25009143-25009206)
chr8 (283-346)||(30464431-30464494)
chr8 (284-346)||(4960151-4960213)
chr8 (284-346)||(14584206-14584268)
chr8 (284-346)||(20671256-20671318)
chr8 (283-343)||(8123654-8123714)
[»] scaffold0221 (1 HSPs)
scaffold0221 (284-346)||(5376-5438)
[»] chr7 (9 HSPs)
chr7 (284-346)||(30462223-30462285)
chr7 (284-346)||(37101028-37101090)
chr7 (284-346)||(41007958-41008020)
chr7 (283-346)||(32972329-32972392)
chr7 (283-346)||(36819615-36819678)
chr7 (283-346)||(38069050-38069113)
chr7 (284-346)||(16807148-16807210)
chr7 (300-346)||(25274019-25274065)
chr7 (284-346)||(35693832-35693894)
[»] scaffold1248 (1 HSPs)
scaffold1248 (284-346)||(1458-1520)
[»] scaffold0952 (1 HSPs)
scaffold0952 (284-346)||(793-855)


Alignment Details
Target: scaffold0154 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 274
Target Start/End: Original strand, 7050 - 7344
Alignment:
Q  1 agtgtaaaaaatatggaaagaagaatatgaaataaaataagaaattgaggctaaagtggg-gccaatacgtaagtataattaagactaaagttatgcata 99  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  7050 agtgtaaaaaatatggagagaagaagatgaaataaaataagaaattgaggctaaagtgggagccgatacgtaagtataattaagactaaagttatgcata 7149  T
Q  100 cgattcttagtcaaacttcactccccattttatgaaagactttgactcac--------------------gggagcctgacttcacaaacaactaggttt 179  Q
    |||  ||||||||||||||||||||| |||||||||||||||||||||||                    ||||||||||||||||||||||||||||||    
T  7150 cgaaccttagtcaaacttcactccccgttttatgaaagactttgactcacttttctcatatcttatttcagggagcctgacttcacaaacaactaggttt 7249  T
Q  180 tttgatttagaattgatgttttctcaatcaaacaaaataaattccattccaacctgtactttaccttctaattagattacgccataatagttggg 274  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7250 tttgatttaaaattgatgttttctcaatcaaacaaaataaattccattccaacctgtactttaccttctaattagattacaccataatagttggg 7344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 285 - 346
Target Start/End: Original strand, 26759480 - 26759541
Alignment:
Q  285 actccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||    
T  26759480 actccctccatctcataataaatgatctatttaaaaatttgtaattttgacctaacttactt 26759541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 346
Target Start/End: Complemental strand, 901148 - 901085
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||||||||| |||| ||||||||||||| ||| ||||| || ||||||||||||||||||||    
T  901148 ttactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactt 901085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 28959058 - 28958996
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| || | ||||| |||||||||||||||||||| |||||||||||| |||||||    
T  28959058 tactccctccgtctcgcaatagatgatctatttaaaaatttgcaattttgacctagcttactt 28958996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 29720395 - 29720457
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| |||| ||||||||||||| ||| ||||| || ||||||||||||||||||||    
T  29720395 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactt 29720457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 34263763 - 34263701
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| |||| |||||||||| || ||||||||| || ||||||||||||||||||||    
T  34263763 tactccctccgtcccgcaataaatgacctgtttaaaaatgtgcaattttgacctaacttactt 34263701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 9484595 - 9484658
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||||||||| |||| |||||||||| || ||| ||||| || ||||||||||||||||||||    
T  9484595 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactt 9484658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 346
Target Start/End: Complemental strand, 29793438 - 29793375
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||||||||| |||| |||||||||| || ||| ||||| || ||||||||||||||||||||    
T  29793438 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactt 29793375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 346
Target Start/End: Complemental strand, 42098687 - 42098624
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||||||||| |||| |||||||||| || ||| ||||| || ||||||||||||||||||||    
T  42098687 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactt 42098624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 346
Target Start/End: Complemental strand, 44782043 - 44781980
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||||||||| |||| ||||| |||| |||||| |||||||| |||||||| |||||||||||    
T  44782043 ttactccctccgtcccgcaatagatgacctatttgaaaatttgcaattttgaactaacttactt 44781980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 4229247 - 4229185
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||||||||||||  ||||||||||  ||||| |||||||| |||||||||||| |||||||    
T  4229247 tactccctccatcctgcaataaatgacttatttgaaaatttgcaattttgacctagcttactt 4229185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 48927861 - 48927799
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| |||| ||||||||||||| ||| ||||| || |||||| |||||||||||||    
T  48927861 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaatttttacctaacttactt 48927799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 49076485 - 49076423
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| |||| |||||||||| || ||| ||||| || ||||||||||||||||||||    
T  49076485 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactt 49076423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 343
Target Start/End: Complemental strand, 53275055 - 53274995
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaactta 343  Q
    ||||||| ||| |||| |||||||||| |||||| ||||| || |||||||||||||||||    
T  53275055 ttactccttccgtcccgcaataaatgacctatttgaaaatgtgcaattttgacctaactta 53274995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 2643329 - 2643274
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgaccta 338  Q
    ||||||||||| |||| ||||| |||| |||||| |||||||| ||||||||||||    
T  2643329 ttactccctccgtcccgcaatagatgacctatttgaaaatttgcaattttgaccta 2643274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 343
Target Start/End: Complemental strand, 16434916 - 16434857
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaactta 343  Q
    |||||||||| |||| |||||||||| || ||| ||||| || |||||||||||||||||    
T  16434916 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaactta 16434857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 29809344 - 29809407
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||||||||| |||| ||||| |||| |||||| |||||||| |||||||| ||| |||||||    
T  29809344 ttactccctccgtcccgcaatagatgacctatttgaaaatttgcaattttgatctagcttactt 29809407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 346
Target Start/End: Complemental strand, 38834013 - 38833962
Alignment:
Q  295 tcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||| |||||||||| || ||||||||| || ||||||||||||||||||||    
T  38834013 tcccgcaataaatgacctgtttaaaaatgtgtaattttgacctaacttactt 38833962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 4945910 - 4945848
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| |||||| ||| ||||  ||||| | |||||| ||||||||||||||||||||    
T  4945910 tactccctccgtcccaccatagatgacgtatttgagaatttgcaattttgacctaacttactt 4945848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 12948040 - 12948102
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| |||| ||||||||||  | ||| ||||| || ||||||||||||||||||||    
T  12948040 tactccctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaacttactt 12948102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 343
Target Start/End: Original strand, 32961257 - 32961305
Alignment:
Q  295 tcccacaataaatgatctatttaaaaatttgaaattttgacctaactta 343  Q
    |||| ||||| |||| | ||||||||||||| |||||||||||||||||    
T  32961257 tcccgcaatagatgacccatttaaaaatttgcaattttgacctaactta 32961305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 341
Target Start/End: Complemental strand, 53055683 - 53055627
Alignment:
Q  285 actccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaact 341  Q
    ||||||||| ||| ||||||||||| | |||| ||||| || |||||||||||||||    
T  53055683 actccctccgtcctacaataaatgaccaatttgaaaatgtgtaattttgacctaact 53055627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 6e-16; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 346
Target Start/End: Complemental strand, 31657420 - 31657357
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||||||||| |||| |||||||||| ||||||||||||||| |||||||||||| |||||||    
T  31657420 ttactccctccgtcccgcaataaatgacctatttaaaaatttgcaattttgacctagcttactt 31657357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 3708253 - 3708315
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| |||||||||||||||||| ||| ||||| || ||||||||||||||||||||    
T  3708253 tactccctccgtcccacaataaatgatctgtttgaaaatgtgcaattttgacctaacttactt 3708315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 31152660 - 31152723
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||||||||| ||||||||||||||| || ||| ||||| || ||||||||||||||||||||    
T  31152660 ttactccctccgtcccacaataaatgacctgtttgaaaatgtgcaattttgacctaacttactt 31152723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 23605965 - 23605903
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||| ||||||||| ||||||||||||||||| |||||||  |||||||||||| |||||||    
T  23605965 tactctctccatcccgcaataaatgatctatttgaaaatttacaattttgacctagcttactt 23605903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 6520434 - 6520497
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||||| ||| |||| |||||||||| |||||| |||||||| |||||||||||| |||||||    
T  6520434 ttactccatccgtcccgcaataaatgacctatttgaaaatttgcaattttgacctagcttactt 6520497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 346
Target Start/End: Complemental strand, 8525480 - 8525417
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||||||||| ||||| ||||||||| || ||| ||||| || ||||||||||||||||||||    
T  8525480 ttactccctccgtcccataataaatgacctgtttgaaaatatgcaattttgacctaacttactt 8525417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 46608212 - 46608275
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||| ||||| |||| |||||||||| || ||| ||||| |||||||||||||||||||||||    
T  46608212 ttacttcctccgtcccgcaataaatgacctgtttgaaaatgtgaaattttgacctaacttactt 46608275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 10384848 - 10384910
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| |||| |||||||||| || ||| ||||| || ||||||||||||||||||||    
T  10384848 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactt 10384910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 43447165 - 43447227
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| ||||  |||||||||||| ||| ||||| || ||||||||||||||||||||    
T  43447165 tactccctccgtcccgtaataaatgatctgtttgaaaatgtgcaattttgacctaacttactt 43447227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 339
Target Start/End: Original strand, 42185273 - 42185329
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaa 339  Q
    ||||||||||| |||| ||||| |||||| |||| |||||||| |||||||||||||    
T  42185273 ttactccctccgtcccgcaatagatgatccatttgaaaatttgcaattttgacctaa 42185329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 33394076 - 33394139
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||| ||||| ||||||||||  ||| | |||||||||| || ||||||||||||||||||||    
T  33394076 ttacttcctccgtcccacaataggtgacccatttaaaaatgtgcaattttgacctaacttactt 33394139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 343
Target Start/End: Complemental strand, 55631938 - 55631879
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaactta 343  Q
    |||||||||| |||| |||||||||| || ||| ||||| || |||||||||||||||||    
T  55631938 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaactta 55631879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 37667837 - 37667775
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| |||| |||||||||| || ||| ||||| || ||||||||||||| ||||||    
T  37667837 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaatttactt 37667775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 39332893 - 39332831
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| || | ||||||||||||| ||| ||||| || |||||||| |||||||||||    
T  39332893 tactccctccgtcacgcaataaatgatctgtttgaaaatgtgcaattttgaactaacttactt 39332831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 40411672 - 40411610
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| ||||  ||||||||| || ||| ||||| || ||||||||||||||||||||    
T  40411672 tactccctccgtcccgtaataaatgacctgtttgaaaatgtgcaattttgacctaacttactt 40411610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0281 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 13104 - 13166
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| ||||||||||||||| || |||||||||||| |||||||||||| |||||||    
T  13104 tactccctccgtcccacaataaatgacctgtttaaaaatttgcaattttgacctagcttactt 13166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 44240519 - 44240581
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| |||| |||||||||| ||||||||||||||| |||||||||||| |||||||    
T  44240519 tactccctccgtcccgcaataaatgacctatttaaaaatttgcaattttgacctagcttactt 44240581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 290 - 346
Target Start/End: Original strand, 40883417 - 40883473
Alignment:
Q  290 ctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||||||| ||||| |||||| |||||||||| |||||||||||||||||||||||    
T  40883417 ctccatcccgcaatagatgatccatttaaaaatgtgaaattttgacctaacttactt 40883473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 10124108 - 10124171
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||||| |||||||| |||||||||| || ||| ||||| || ||||||||||||||||||||    
T  10124108 ttactccatccatcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactt 10124171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 45299317 - 45299380
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||||||||| |||| |||||||||| || ||| ||||| || ||||||||||||||||||||    
T  45299317 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactt 45299380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 29253479 - 29253541
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||| ||| |||| ||||| ||||||||||| |||||||| |||||||||||| |||||||    
T  29253479 tactccatccgtcccgcaatagatgatctatttgaaaatttgcaattttgacctagcttactt 29253541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 338
Target Start/End: Complemental strand, 31932246 - 31932192
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgaccta 338  Q
    |||||||||| |||| ||||| ||||||||||| |||||||| ||||||||||||    
T  31932246 tactccctccgtcccgcaatagatgatctatttgaaaatttgcaattttgaccta 31932192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 41855789 - 41855727
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| ||||  ||||||||| |||||| |||||||| |||||||||||| |||||||    
T  41855789 tactccctccgtcccgtaataaatgacctatttgaaaatttgcaattttgacctagcttactt 41855727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 2126652 - 2126714
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||||| || ||||| ||||  ||||||||||| || ||||||||||||| ||||||    
T  2126652 tactccctccattccgcaatagatgacttatttaaaaatgtgtaattttgacctaatttactt 2126714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 5606459 - 5606397
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| |||| |||||||||| |||||| ||||  || |||||||| |||||||||||    
T  5606459 tactccctccgtcccgcaataaatgacctatttgaaaaagtgcaattttgatctaacttactt 5606397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 6017517 - 6017455
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||| ||||| |||| ||||||||||||| ||| ||||| || |||||||| |||||||||||    
T  6017517 tacttcctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgatctaacttactt 6017455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 8251217 - 8251155
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| |||| |||||||||| || ||| ||||| || |||||||| |||||||||||    
T  8251217 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgatctaacttactt 8251155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 10100581 - 10100519
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| |||| ||||||||||  | ||| ||||| || ||||||||||||||||||||    
T  10100581 tactccctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaacttactt 10100519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 346
Target Start/End: Original strand, 48389082 - 48389128
Alignment:
Q  300 caataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| |||||| |||||||| |||||||||||| |||||||    
T  48389082 caataaatgacctatttgaaaatttgcaattttgacctagcttactt 48389128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 346
Target Start/End: Complemental strand, 49903737 - 49903691
Alignment:
Q  300 caataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||| |||||| |||||||||| |||||||||||||||| ||||||    
T  49903737 caatagatgatccatttaaaaatgtgaaattttgacctaatttactt 49903691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 343
Target Start/End: Complemental strand, 8048817 - 8048757
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaactta 343  Q
    ||||||||||| |||  ||||| |||| |||||| |||||||| |||||||||||| ||||    
T  8048817 ttactccctccgtcctgcaatagatgacctatttgaaaatttgcaattttgacctagctta 8048757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 346
Target Start/End: Original strand, 26543874 - 26543930
Alignment:
Q  290 ctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||| |||| ||||||||||||| ||| ||||| |  ||||||||||||||||||||    
T  26543874 ctccgtcccgcaataaatgatctgtttgaaaatgtacaattttgacctaacttactt 26543930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 295 - 346
Target Start/End: Original strand, 16646257 - 16646308
Alignment:
Q  295 tcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||||||||||||| ||||||||||||||| |||||||||||| |||||||    
T  16646257 tcccacaataaatgagctatttaaaaatttgtaattttgacctagcttactt 16646308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 41575562 - 41575624
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| |||| |||||||||| |||||| |||||||| |||||||||||| |||||||    
T  41575562 tactccctccgtcccgcaataaatgacctatttgaaaatttgcaattttgacctagcttactt 41575624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 346
Target Start/End: Complemental strand, 16127842 - 16127781
Alignment:
Q  285 actccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||||||| |||| |||||||||| |||||| ||||| || ||||||||||||||||||||    
T  16127842 actccctccgtcccgcaataaatgacctatttgaaaatgtgtaattttgacctaacttactt 16127781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 31603477 - 31603417
Alignment:
Q  286 ctccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||| ||||||||||||||| || ||| ||||| || ||||||||||||||||||||    
T  31603477 ctccctccgtcccacaataaatgacctgtttgaaaatgtgcaattttgacctaacttactt 31603417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 8373434 - 8373496
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||  |||| ||||||||||||| ||| ||||| || ||||||||||||||||||||    
T  8373434 tactccctctgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactt 8373496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 346
Target Start/End: Complemental strand, 22718589 - 22718544
Alignment:
Q  301 aataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||||||||| |||||||| |||||||||||| |||||||    
T  22718589 aataaatgatctatttgaaaatttgcaattttgacctagcttactt 22718544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 346
Target Start/End: Original strand, 2831725 - 2831769
Alignment:
Q  302 ataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| |||||||||| || ||||||||||||||||||||    
T  2831725 ataaatgatccatttaaaaatgtgtaattttgacctaacttactt 2831769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 7724672 - 7724612
Alignment:
Q  286 ctccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||| |||| |||||||||| || ||| ||||| || ||||||||||||||||||||    
T  7724672 ctccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactt 7724612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 12208988 - 12209051
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||| ||||| |||| |||||||||| || ||| ||||| || ||||||||||||||||||||    
T  12208988 ttacttcctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactt 12209051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 346
Target Start/End: Complemental strand, 16126146 - 16126083
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||| |||| |||| |||||||||| | |||| ||||| || ||||||||||||||||||||    
T  16126146 ttactctctccgtcccgcaataaatgacccatttgaaaatgtgcaattttgacctaacttactt 16126083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 16333479 - 16333542
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||| |||| |||| |||||||||| | |||| ||||| || ||||||||||||||||||||    
T  16333479 ttactctctccgtcccgcaataaatgacccatttgaaaatgtgcaattttgacctaacttactt 16333542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 20682653 - 20682716
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||||||||| |||| |||||  ||| ||||||||||||||| |||||||||| | |||||||    
T  20682653 ttactccctccgtcccgcaatagttgacctatttaaaaatttgcaattttgacccagcttactt 20682716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 8896271 - 8896333
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||||| || ||||| |||| | |||| ||||| || ||||||||||||||||||||    
T  8896271 tactccctccattccgcaatagatgacccatttgaaaatgtgcaattttgacctaacttactt 8896333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 343
Target Start/End: Complemental strand, 10333642 - 10333582
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaactta 343  Q
    ||||||||||| || |  |||||||||||| ||| ||||| || |||||||||||||||||    
T  10333642 ttactccctccgtctcgtaataaatgatctgtttgaaaatgtgtaattttgacctaactta 10333582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 2667393 - 2667331
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| |||| ||||||||||||| ||| ||||| || ||||||||||||||||||||    
T  2667393 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactt 2667331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 17496386 - 17496324
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| |||| ||||||||||||| ||| ||||| || ||||||||||||||||||||    
T  17496386 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactt 17496324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 30699261 - 30699323
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| | || ||||||||||||| ||||||||| || ||||||||||||||||||||    
T  30699261 tactccctccgttccgcaataaatgatctgtttaaaaatgtgtaattttgacctaacttactt 30699323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 346
Target Start/End: Complemental strand, 24798615 - 24798552
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||||||||| |||| |||||||||| || ||| ||||| || ||||||||||||||||||||    
T  24798615 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactt 24798552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 29795451 - 29795513
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| |||| ||||||||||||| ||| ||||| || |||||||| |||||||||||    
T  29795451 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgatctaacttactt 29795513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 2397770 - 2397832
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| |||| |||||||||| || ||| ||||| || ||||||||||||| ||||||    
T  2397770 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaatttactt 2397832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 2656738 - 2656676
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||| ||| |||| |||||||||| || ||| ||||| || ||||||||||||||||||||    
T  2656738 tactccatccgtcccgcaataaatgagctgtttgaaaatgtgcaattttgacctaacttactt 2656676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 346
Target Start/End: Complemental strand, 10109463 - 10109417
Alignment:
Q  300 caataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||| |||||| |||||||||| || ||||||||||||||||||||    
T  10109463 caatagatgatccatttaaaaatgtgcaattttgacctaacttactt 10109417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 16661670 - 16661608
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||  |||| ||||| |||||| |||| ||||| || ||||||||||||||||||||    
T  16661670 tactccctcagtcccgcaatagatgatccatttgaaaatgtgtaattttgacctaacttactt 16661608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 31708893 - 31708955
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| |||  ||||| ||||||||||||||||| || ||||||||| ||| ||||||    
T  31708893 tactccctccgtcctgcaatagatgatctatttaaaaatgtgcaattttgacttaatttactt 31708955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 32541545 - 32541483
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| |||| |||||||||| || ||| ||||| || ||||||||||||| ||||||    
T  32541545 tactccctccgtcccgcaataaatgacctgtttgaaaatatgcaattttgacctaatttactt 32541483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 343
Target Start/End: Original strand, 32673765 - 32673807
Alignment:
Q  301 aataaatgatctatttaaaaatttgaaattttgacctaactta 343  Q
    |||| |||||||||||||||||||| |||||||| ||||||||    
T  32673765 aatagatgatctatttaaaaatttgcaattttgatctaactta 32673807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 41263193 - 41263131
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| |||| ||||||||||| | ||||||||| || ||||||||||||||||||||    
T  41263193 tactccctccgtccctcaataaatgatatgtttaaaaatgtgcaattttgacctaacttactt 41263131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 283 - 343
Target Start/End: Complemental strand, 30721750 - 30721690
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaactta 343  Q
    |||||||||||||||| ||||||||||  ||||| ||||| || |||||||||||||||||    
T  30721750 ttactccctccatcccgcaataaatgacatatttgaaaatgtgcaattttgacctaactta 30721690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 346
Target Start/End: Original strand, 14057711 - 14057770
Alignment:
Q  287 tccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||||| |||| ||||||||||||| ||| ||||| || ||||||||||||||||||||    
T  14057711 tccctccgtcccgcaataaatgatctgtttgaaaatatgcaattttgacctaacttactt 14057770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 1098175 - 1098237
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| |||| |||||||||| || ||| ||||| || ||||||||||||||||||||    
T  1098175 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactt 1098237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 14633007 - 14633069
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| |||  ||||||||||||| ||| ||||| || ||||||||||||||||||||    
T  14633007 tactccctccgtcctgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactt 14633069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 27675540 - 27675602
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| |||| ||||||||||  ||||| |||||||| |||||||||||| |||||||    
T  27675540 tactccctccgtcccgcaataaatgacttatttgaaaatttgcaattttgacctagcttactt 27675602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 33402655 - 33402593
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| ||||  |||| ||||||| ||||||||| || ||||||||||||||||||||    
T  33402655 tactccctccgtcccgtaatagatgatctgtttaaaaatgtgtaattttgacctaacttactt 33402593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 339
Target Start/End: Complemental strand, 9936953 - 9936897
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaa 339  Q
    ||||||||||| |||| ||||||||||| ||||||||||| || |||||||| ||||    
T  9936953 ttactccctccgtcccgcaataaatgatatatttaaaaatgtgcaattttgatctaa 9936897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 346
Target Start/End: Complemental strand, 10465360 - 10465297
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||||||||| |||| ||||| |||| |||||| |||||||  |||||||||||| |||||||    
T  10465360 ttactccctccctcccgcaatagatgacctatttgaaaatttataattttgacctatcttactt 10465297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 346
Target Start/End: Complemental strand, 20040480 - 20040417
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||||||||| ||||  ||||||||| || ||| ||||| || ||||||||||||||||||||    
T  20040480 ttactccctccgtcccgtaataaatgacctgtttgaaaatgtgcaattttgacctaacttactt 20040417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 40079980 - 40080043
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||||||||| ||| |||||| |||| |||||| |||||||  |||||| |||||||||||||    
T  40079980 ttactccctccgtcctacaatagatgacctatttgaaaatttacaattttaacctaacttactt 40080043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 1781209 - 1781147
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| |||| |||||||||| || ||| ||||| || ||||||||||||| ||||||    
T  1781209 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaagttactt 1781147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 40316818 - 40316880
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| |||| |||||||||| || ||| ||||| || ||||||||||||| ||||||    
T  40316818 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaatttactt 40316880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 41410723 - 41410661
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| |||| |||||||||| || ||| ||||| || ||||||||||||| ||||||    
T  41410723 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaatttactt 41410661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 346
Target Start/End: Complemental strand, 30211799 - 30211743
Alignment:
Q  290 ctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||| |||| |||||||||| || ||||||||| || |||||||| |||||||||||    
T  30211799 ctccgtcccgcaataaatgacctgtttaaaaatgtgcaattttgatctaacttactt 30211743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000003; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 346
Target Start/End: Complemental strand, 43184841 - 43184778
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||||||||  |||||||||| || ||||||||| ||  |||||||||||||||||||    
T  43184841 ttactccctccatcctgcaataaatgacctgtttaaaaatgtgttattttgacctaacttactt 43184778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 343
Target Start/End: Complemental strand, 44887776 - 44887717
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaactta 343  Q
    |||||||||| |||| ||||||||||||||||| ||||| || ||||||||||| |||||    
T  44887776 tactccctccgtcccgcaataaatgatctatttgaaaatgtgcaattttgacctgactta 44887717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 37094132 - 37094194
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||| ||||| |||| |||||||||| |||||| |||||||| |||||||||||| |||||||    
T  37094132 tacttcctccgtcccgcaataaatgacctatttgaaaatttgcaattttgacctagcttactt 37094194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 346
Target Start/End: Complemental strand, 14378748 - 14378685
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||||||||| |||| |||||||||||   ||| ||||| || ||||||||||||||||||||    
T  14378748 ttactccctccgtcccgcaataaatgataggtttgaaaatgtgcaattttgacctaacttactt 14378685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 23547067 - 23547130
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||||||||| ||||| ||||||||| || ||||||| | || |||||||| |||||||||||    
T  23547067 ttactccctccgtcccataataaatgacctgtttaaaattgtgtaattttgatctaacttactt 23547130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 25009143 - 25009206
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||| ||||| |||| ||||||||||||| ||| ||||| || ||||||||||||| ||||||    
T  25009143 ttacttcctccgtccctcaataaatgatctgtttgaaaatgtgcaattttgacctaatttactt 25009206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 30464431 - 30464494
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||||||||| |||| ||||||||||  | ||| ||||| || ||||||||||||||||||||    
T  30464431 ttactccctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaacttactt 30464494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 4960151 - 4960213
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||| ||| ||||  |||| ||||||||||| |||||||| |||||||||||| |||||||    
T  4960151 tactccttccgtcccgtaatagatgatctatttgaaaatttgcaattttgacctagcttactt 4960213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 14584268 - 14584206
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| ||||| |||| ||||||||||| |||||||  |||||||| ||| |||||||    
T  14584268 tactccctccgtcccataatagatgatctatttgaaaatttataattttgatctagcttactt 14584206  T

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Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 20671256 - 20671318
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| || | ||||| |||||| |||| ||||| || ||||||||||||||||||||    
T  20671256 tactccctccgtcgcgcaatagatgatcaatttgaaaatgtgtaattttgacctaacttactt 20671318  T

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Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 343
Target Start/End: Original strand, 8123654 - 8123714
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaactta 343  Q
    ||||||||||| | |  ||||| |||||| |||||||||| || |||||||||||||||||    
T  8123654 ttactccctccgttctgcaatagatgatccatttaaaaatgtgtaattttgacctaactta 8123714  T

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Target: scaffold0221 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 5376 - 5438
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| |||| |||||||||| || ||| ||||| || ||||||||||||||||||||    
T  5376 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactt 5438  T

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Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 30462285 - 30462223
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| |||| ||||||||||||| ||| ||||| || ||||||||| ||||||||||    
T  30462285 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacttaacttactt 30462223  T

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Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 37101090 - 37101028
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| |||| ||||| |||| |||||| ||||| || ||||||||||||||||||||    
T  37101090 tactccctccgtcccgcaatagatgacctatttgaaaatgtgtaattttgacctaacttactt 37101028  T

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Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 41008020 - 41007958
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||||||||||| ||||||| ||||   |||||||||| || ||||||||||||||||||||    
T  41008020 tactccctccatctcacaatagatgactcatttaaaaatatgtaattttgacctaacttactt 41007958  T

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Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 346
Target Start/End: Complemental strand, 32972392 - 32972329
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||||||||| |||| ||||| |||| |||||| |||||||| || ||||||||| |||||||    
T  32972392 ttactccctccctcccgcaatagatgacctatttgaaaatttgcaagtttgacctagcttactt 32972329  T

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Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 36819615 - 36819678
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||||||||| | || |||||||||| || ||| ||||| || ||||||||||||||||||||    
T  36819615 ttactccctccgttccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactt 36819678  T

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Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 38069050 - 38069113
Alignment:
Q  283 ttactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||||||||| | || |||||||||| || ||| ||||| || ||||||||||||||||||||    
T  38069050 ttactccctccgttccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactt 38069113  T

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Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 16807210 - 16807148
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| ||||  ||||||||| || ||| ||||| || ||||||||||||||||||||    
T  16807210 tactccctccgtcccgtaataaatgacctgtttgaaaatgtgcaattttgacctaacttactt 16807148  T

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Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 346
Target Start/End: Complemental strand, 25274065 - 25274019
Alignment:
Q  300 caataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||||||||||| ||| ||||| || ||||||||||||||||||||    
T  25274065 caataaatgatctgtttgaaaatgtgcaattttgacctaacttactt 25274019  T

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Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 35693894 - 35693832
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    |||||||||| || | |||||||||| || ||| ||||| || ||||||||||||||||||||    
T  35693894 tactccctccgtcgcgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactt 35693832  T

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Target: scaffold1248 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1248
Description:

Target: scaffold1248; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 1520 - 1458
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||| |||||||||  |||| ||||| ||||||||||| || ||||||||| ||||||||||    
T  1520 tactctctccatcccgtaatagatgatttatttaaaaatgtgtaattttgacataacttactt 1458  T

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Target: scaffold0952 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 793 - 855
Alignment:
Q  284 tactccctccatcccacaataaatgatctatttaaaaatttgaaattttgacctaacttactt 346  Q
    ||||| |||||||||  |||| ||||| ||||||||||| || ||||||||| ||||||||||    
T  793 tactctctccatcccgtaatagatgatttatttaaaaatgtgtaattttgacataacttactt 855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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