View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7166_low_5 (Length: 240)
Name: NF7166_low_5
Description: NF7166
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7166_low_5 |
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Alignment Details
Target: chr6 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 7 - 224
Target Start/End: Complemental strand, 19684563 - 19684346
Alignment:
| Q |
7 |
acatcactctcaaaccttttcaactttcacaaacaaacatgcttaattttcacctcaaaaactcttactttacttccctcacaactataactcccttcct |
106 |
Q |
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| T |
19684563 |
acatcactctcaaaccttttcaactttcacaaacaaacatgcttaattttcacctcaaaaactcttactttacttccctcacaactataactcccttcct |
19684464 |
T |
|
| Q |
107 |
ctttcttctattcctaaaccatgttgaatcacaagcttccatggaacctgttcctactgatatctctcatcatagatggaatccttcctttgcaatcaca |
206 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19684463 |
ctttcttctactcctaaaccatgttgaatcacaagcttccatggaacctgttcctactgatatctctcatcatagatggaatccttcctttgcaatcaca |
19684364 |
T |
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| Q |
207 |
gctggtgcagtactttgt |
224 |
Q |
| |
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|||||||||||||||||| |
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| T |
19684363 |
gctggtgcagtactttgt |
19684346 |
T |
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