View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7166_low_7 (Length: 203)

Name: NF7166_low_7
Description: NF7166
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7166_low_7
NF7166_low_7
[»] chr8 (34 HSPs)
chr8 (21-193)||(18440547-18440718)
chr8 (28-193)||(26452116-26452280)
chr8 (21-193)||(2416706-2416877)
chr8 (21-193)||(42603245-42603416)
chr8 (23-193)||(41857228-41857397)
chr8 (23-193)||(41275185-41275354)
chr8 (28-193)||(24861134-24861298)
chr8 (21-193)||(40702151-40702322)
chr8 (21-189)||(16575487-16575654)
chr8 (21-141)||(22548105-22548225)
chr8 (21-193)||(15032576-15032747)
chr8 (23-178)||(40414417-40414571)
chr8 (30-193)||(44943341-44943503)
chr8 (21-139)||(485510-485628)
chr8 (23-189)||(43692932-43693097)
chr8 (21-186)||(33799803-33799967)
chr8 (47-189)||(43640297-43640438)
chr8 (21-141)||(19242414-19242534)
chr8 (21-141)||(19315598-19315718)
chr8 (21-141)||(26484419-26484539)
chr8 (21-141)||(34614795-34614915)
chr8 (21-141)||(38034177-38034297)
chr8 (21-141)||(42169212-42169332)
chr8 (21-141)||(41363498-41363618)
chr8 (30-189)||(28706403-28706561)
chr8 (57-189)||(3589542-3589673)
chr8 (48-189)||(31172095-31172235)
chr8 (151-193)||(37780434-37780476)
chr8 (151-189)||(12505102-12505140)
chr8 (151-189)||(8751562-8751600)
chr8 (151-189)||(24630271-24630309)
chr8 (151-188)||(27783242-27783279)
chr8 (153-189)||(32109311-32109347)
chr8 (23-82)||(40415158-40415217)
[»] chr2 (52 HSPs)
chr2 (21-193)||(35491420-35491591)
chr2 (21-193)||(40678865-40679036)
chr2 (21-193)||(2919613-2919784)
chr2 (21-193)||(22001631-22001802)
chr2 (21-193)||(29067515-29067686)
chr2 (21-193)||(34638751-34638922)
chr2 (21-193)||(3941522-3941693)
chr2 (21-189)||(6901755-6901922)
chr2 (21-193)||(10364887-10365058)
chr2 (21-189)||(19471884-19472051)
chr2 (21-188)||(16706757-16706923)
chr2 (21-193)||(31770148-31770319)
chr2 (21-141)||(37312745-37312865)
chr2 (21-193)||(39393676-39393847)
chr2 (21-193)||(41499332-41499502)
chr2 (21-189)||(20147907-20148074)
chr2 (21-189)||(22493060-22493227)
chr2 (21-193)||(39800092-39800263)
chr2 (21-139)||(29906420-29906538)
chr2 (23-188)||(42241351-42241515)
chr2 (21-189)||(29110948-29111114)
chr2 (21-189)||(33403807-33403974)
chr2 (21-189)||(42119801-42119968)
chr2 (21-139)||(3937314-3937432)
chr2 (21-189)||(17796354-17796525)
chr2 (23-140)||(16581659-16581776)
chr2 (21-141)||(34521933-34522053)
chr2 (21-139)||(17424627-17424745)
chr2 (21-139)||(43982694-43982812)
chr2 (21-141)||(6976676-6976794)
chr2 (21-141)||(27130759-27130879)
chr2 (23-189)||(12968554-12968719)
chr2 (21-141)||(10360449-10360569)
chr2 (53-189)||(32734437-32734572)
chr2 (49-189)||(16253265-16253404)
chr2 (50-184)||(16413384-16413517)
chr2 (151-193)||(26858959-26859001)
chr2 (154-193)||(16581283-16581322)
chr2 (151-189)||(26617862-26617900)
chr2 (151-189)||(18878297-18878335)
chr2 (151-188)||(31992322-31992359)
chr2 (151-188)||(37058649-37058686)
chr2 (157-193)||(28472563-28472599)
chr2 (157-188)||(15892040-15892071)
chr2 (151-190)||(28747332-28747371)
chr2 (21-83)||(5420363-5420425)
chr2 (151-189)||(18036550-18036588)
chr2 (151-189)||(20530143-20530181)
chr2 (151-189)||(20988310-20988348)
chr2 (151-185)||(27650818-27650852)
chr2 (158-188)||(36194597-36194627)
chr2 (151-185)||(40501087-40501121)
[»] chr3 (70 HSPs)
chr3 (23-193)||(45100720-45100890)
chr3 (21-193)||(49610284-49610455)
chr3 (21-193)||(52569661-52569832)
chr3 (21-193)||(46346828-46346999)
chr3 (21-193)||(2647129-2647300)
chr3 (21-193)||(4004340-4004511)
chr3 (21-193)||(24702524-24702695)
chr3 (21-193)||(41577723-41577894)
chr3 (21-193)||(49218989-49219160)
chr3 (21-193)||(2428282-2428453)
chr3 (21-193)||(19453482-19453653)
chr3 (21-193)||(36134803-36134974)
chr3 (28-189)||(6464605-6464765)
chr3 (28-193)||(7245889-7246053)
chr3 (21-189)||(7954002-7954169)
chr3 (21-189)||(42950273-42950440)
chr3 (23-189)||(37281251-37281416)
chr3 (21-193)||(13896123-13896294)
chr3 (21-193)||(43476839-43477009)
chr3 (21-193)||(51695859-51696030)
chr3 (21-188)||(47065487-47065653)
chr3 (21-187)||(774591-774756)
chr3 (23-193)||(2268749-2268917)
chr3 (28-193)||(34647527-34647690)
chr3 (23-189)||(44835742-44835907)
chr3 (21-193)||(3495282-3495453)
chr3 (21-189)||(27186747-27186914)
chr3 (21-141)||(47760144-47760264)
chr3 (19-189)||(8633610-8633779)
chr3 (28-189)||(6754003-6754163)
chr3 (21-141)||(11378997-11379117)
chr3 (21-141)||(34693542-34693661)
chr3 (21-141)||(43569756-43569876)
chr3 (21-141)||(46414587-46414707)
chr3 (21-141)||(51015123-51015243)
chr3 (21-139)||(49140307-49140425)
chr3 (21-141)||(10053524-10053644)
chr3 (28-140)||(36721645-36721757)
chr3 (21-133)||(44927317-44927429)
chr3 (21-129)||(49273257-49273365)
chr3 (21-188)||(42382851-42383017)
chr3 (21-139)||(46402851-46402969)
chr3 (21-139)||(54390290-54390408)
chr3 (21-189)||(33449392-33449562)
chr3 (21-141)||(25576844-25576964)
chr3 (21-129)||(34472329-34472437)
chr3 (21-133)||(51013531-51013643)
chr3 (29-188)||(42382071-42382229)
chr3 (21-139)||(34049575-34049693)
chr3 (23-141)||(42328371-42328489)
chr3 (21-141)||(14631291-14631411)
chr3 (21-141)||(30192384-30192504)
chr3 (30-141)||(41803749-41803860)
chr3 (21-189)||(53826949-53827116)
chr3 (23-193)||(20378142-20378311)
chr3 (21-189)||(39417201-39417373)
chr3 (21-189)||(48087805-48087977)
chr3 (48-189)||(14265207-14265347)
chr3 (50-183)||(15636829-15636961)
chr3 (79-141)||(50458921-50458983)
chr3 (21-105)||(55207128-55207212)
chr3 (151-188)||(4095582-4095619)
chr3 (151-186)||(17370603-17370638)
chr3 (151-190)||(29635304-29635343)
chr3 (151-189)||(1638987-1639025)
chr3 (151-189)||(17267681-17267719)
chr3 (151-189)||(25156240-25156278)
chr3 (151-189)||(43688178-43688216)
chr3 (151-183)||(19237089-19237121)
chr3 (151-183)||(31091945-31091977)
[»] scaffold0192 (1 HSPs)
scaffold0192 (21-191)||(18147-18316)
[»] chr7 (52 HSPs)
chr7 (21-193)||(28979275-28979447)
chr7 (21-193)||(40588332-40588503)
chr7 (21-193)||(48270431-48270602)
chr7 (21-193)||(36394077-36394248)
chr7 (21-193)||(41048573-41048744)
chr7 (21-193)||(45363496-45363667)
chr7 (21-189)||(34140652-34140819)
chr7 (21-193)||(21650306-21650477)
chr7 (21-193)||(46862447-46862618)
chr7 (21-193)||(17839106-17839277)
chr7 (28-193)||(13916617-13916781)
chr7 (21-193)||(48315433-48315600)
chr7 (21-193)||(42682739-42682910)
chr7 (21-141)||(43351352-43351472)
chr7 (21-141)||(21615013-21615133)
chr7 (21-189)||(30360304-30360471)
chr7 (21-139)||(20564595-20564713)
chr7 (21-189)||(18237350-18237518)
chr7 (21-189)||(47268697-47268865)
chr7 (28-192)||(28114653-28114816)
chr7 (31-141)||(21187559-21187669)
chr7 (21-189)||(26603458-26603625)
chr7 (21-189)||(48220995-48221162)
chr7 (23-189)||(2356076-2356241)
chr7 (21-133)||(42735105-42735217)
chr7 (21-189)||(41217396-41217568)
chr7 (21-131)||(20378956-20379066)
chr7 (21-186)||(1642840-1643004)
chr7 (21-105)||(17183082-17183166)
chr7 (21-95)||(10522948-10523022)
chr7 (62-139)||(17320299-17320376)
chr7 (21-98)||(15338158-15338235)
chr7 (23-99)||(39477495-39477571)
chr7 (151-189)||(149868-149906)
chr7 (151-189)||(12082711-12082749)
chr7 (151-189)||(12309979-12310017)
chr7 (151-188)||(3381062-3381099)
chr7 (151-188)||(7414390-7414427)
chr7 (21-190)||(8726471-8726639)
chr7 (90-139)||(9367253-9367302)
chr7 (151-189)||(5282576-5282614)
chr7 (151-189)||(26926296-26926334)
chr7 (153-189)||(7062023-7062059)
chr7 (161-193)||(21187679-21187711)
chr7 (153-189)||(44110668-44110704)
chr7 (151-186)||(11824472-11824507)
chr7 (151-190)||(28066034-28066073)
chr7 (159-189)||(7066514-7066544)
chr7 (151-189)||(22890734-22890772)
chr7 (157-190)||(3924601-3924634)
chr7 (151-188)||(16781436-16781473)
chr7 (151-183)||(41935744-41935776)
[»] chr5 (41 HSPs)
chr5 (21-193)||(3601121-3601292)
chr5 (21-193)||(25498174-25498345)
chr5 (21-193)||(1400558-1400729)
chr5 (21-193)||(11346489-11346660)
chr5 (21-187)||(33370440-33370605)
chr5 (21-193)||(35565052-35565223)
chr5 (21-193)||(35927693-35927863)
chr5 (21-185)||(17366991-17367154)
chr5 (21-193)||(18308040-18308211)
chr5 (21-193)||(27661633-27661804)
chr5 (21-193)||(8576397-8576568)
chr5 (21-193)||(30709378-30709549)
chr5 (28-193)||(7492-7652)
chr5 (28-193)||(42864915-42865079)
chr5 (21-141)||(4724330-4724450)
chr5 (21-193)||(38853938-38854109)
chr5 (21-189)||(40009312-40009479)
chr5 (21-193)||(541891-542066)
chr5 (21-193)||(8537730-8537905)
chr5 (21-139)||(28880824-28880942)
chr5 (21-189)||(19400147-19400314)
chr5 (21-189)||(3458620-3458787)
chr5 (21-193)||(11027557-11027728)
chr5 (21-139)||(19036930-19037048)
chr5 (21-141)||(1971196-1971316)
chr5 (21-141)||(6793642-6793762)
chr5 (28-176)||(1691042-1691189)
chr5 (28-190)||(12805317-12805477)
chr5 (23-189)||(7082076-7082241)
chr5 (28-190)||(12742499-12742659)
chr5 (52-185)||(2599007-2599139)
chr5 (62-193)||(22283547-22283677)
chr5 (28-141)||(36350568-36350673)
chr5 (151-189)||(15798473-15798511)
chr5 (151-189)||(16418477-16418515)
chr5 (151-189)||(28717862-28717900)
chr5 (151-185)||(34595115-34595149)
chr5 (151-189)||(36312337-36312375)
chr5 (151-189)||(13131467-13131505)
chr5 (151-185)||(18920510-18920544)
chr5 (151-185)||(37396496-37396530)
[»] chr4 (71 HSPs)
chr4 (21-193)||(34153543-34153714)
chr4 (21-193)||(1042532-1042703)
chr4 (21-191)||(44560435-44560604)
chr4 (21-193)||(11288075-11288247)
chr4 (21-193)||(49424013-49424185)
chr4 (21-193)||(242671-242842)
chr4 (21-189)||(1225945-1226112)
chr4 (21-193)||(9489460-9489631)
chr4 (21-193)||(957710-957881)
chr4 (21-193)||(21017432-21017603)
chr4 (21-193)||(37866187-37866358)
chr4 (21-185)||(39588718-39588881)
chr4 (21-188)||(42886049-42886215)
chr4 (28-189)||(24606537-24606697)
chr4 (21-189)||(20779124-20779291)
chr4 (21-193)||(28082019-28082190)
chr4 (21-193)||(55794389-55794560)
chr4 (23-189)||(14330951-14331116)
chr4 (21-133)||(21169291-21169403)
chr4 (21-189)||(32938157-32938324)
chr4 (21-189)||(33163799-33163966)
chr4 (21-141)||(49792191-49792311)
chr4 (21-140)||(4785677-4785796)
chr4 (28-186)||(34530058-34530215)
chr4 (28-141)||(2772841-2772954)
chr4 (21-190)||(3393088-3393256)
chr4 (21-193)||(13181551-13181722)
chr4 (21-193)||(40354028-40354199)
chr4 (30-189)||(49063765-49063923)
chr4 (21-193)||(51428447-51428617)
chr4 (21-139)||(6177570-6177688)
chr4 (23-189)||(21711345-21711510)
chr4 (21-139)||(41794817-41794935)
chr4 (21-139)||(56138744-56138862)
chr4 (21-190)||(17211050-17211218)
chr4 (28-141)||(36776781-36776894)
chr4 (21-141)||(20901923-20902043)
chr4 (21-129)||(26591940-26592048)
chr4 (21-141)||(49817899-49818019)
chr4 (28-187)||(31824891-31825049)
chr4 (23-141)||(25762430-25762548)
chr4 (21-141)||(43889754-43889874)
chr4 (28-139)||(49094579-49094690)
chr4 (50-191)||(6282607-6282747)
chr4 (21-185)||(31323963-31324126)
chr4 (28-141)||(46816785-46816898)
chr4 (28-189)||(18412380-18412540)
chr4 (56-141)||(45937295-45937380)
chr4 (23-189)||(10312067-10312222)
chr4 (23-190)||(13850533-13850699)
chr4 (21-184)||(21412780-21412942)
chr4 (52-141)||(47657632-47657721)
chr4 (21-176)||(13866060-13866215)
chr4 (21-138)||(22436751-22436863)
chr4 (21-98)||(51028022-51028099)
chr4 (151-193)||(29699698-29699740)
chr4 (108-189)||(20759480-20759559)
chr4 (108-189)||(20765871-20765950)
chr4 (151-189)||(23124916-23124954)
chr4 (151-189)||(24074891-24074929)
chr4 (151-189)||(44100130-44100168)
chr4 (111-184)||(12227833-12227905)
chr4 (151-189)||(3510813-3510851)
chr4 (158-190)||(893502-893534)
chr4 (153-189)||(25144281-25144317)
chr4 (151-183)||(42420833-42420865)
chr4 (153-188)||(23950487-23950522)
chr4 (151-189)||(12587432-12587470)
chr4 (151-189)||(17291740-17291778)
chr4 (151-189)||(31931367-31931405)
chr4 (101-141)||(11284923-11284963)
[»] chr1 (63 HSPs)
chr1 (21-193)||(49396485-49396656)
chr1 (21-193)||(13972706-13972877)
chr1 (21-193)||(41780474-41780645)
chr1 (21-193)||(4209032-4209203)
chr1 (21-193)||(44337573-44337744)
chr1 (21-191)||(44597484-44597653)
chr1 (28-193)||(6435553-6435717)
chr1 (28-189)||(18169810-18169970)
chr1 (21-189)||(5764991-5765158)
chr1 (21-193)||(19160098-19160269)
chr1 (21-193)||(29435754-29435925)
chr1 (21-193)||(36909342-36909513)
chr1 (21-189)||(47488291-47488459)
chr1 (21-193)||(29762475-29762645)
chr1 (21-141)||(38046688-38046808)
chr1 (21-185)||(17372516-17372679)
chr1 (21-193)||(27486944-27487114)
chr1 (21-181)||(35526431-35526590)
chr1 (21-193)||(49427169-49427339)
chr1 (28-193)||(14174019-14174183)
chr1 (21-186)||(18842227-18842391)
chr1 (21-189)||(13283492-13283658)
chr1 (21-193)||(13635551-13635722)
chr1 (21-141)||(24270617-24270737)
chr1 (21-189)||(50068513-50068680)
chr1 (21-188)||(51269588-51269754)
chr1 (21-141)||(17686601-17686721)
chr1 (21-141)||(37777924-37778044)
chr1 (23-189)||(30310082-30310246)
chr1 (23-189)||(39224453-39224618)
chr1 (21-187)||(42572030-42572195)
chr1 (21-189)||(46181806-46181974)
chr1 (59-189)||(24364060-24364189)
chr1 (28-141)||(35184802-35184915)
chr1 (21-141)||(23342473-23342593)
chr1 (21-141)||(35587183-35587303)
chr1 (47-189)||(21484911-21485055)
chr1 (47-189)||(49599142-49599284)
chr1 (30-193)||(49926630-49926792)
chr1 (28-189)||(48568665-48568830)
chr1 (21-182)||(17696838-17696998)
chr1 (21-189)||(27035572-27035738)
chr1 (21-141)||(39857160-39857280)
chr1 (21-141)||(12791527-12791648)
chr1 (21-189)||(41875138-41875310)
chr1 (21-141)||(45688954-45689073)
chr1 (21-139)||(13148126-13148243)
chr1 (78-141)||(49263256-49263319)
chr1 (50-189)||(16098214-16098352)
chr1 (151-190)||(19262760-19262799)
chr1 (151-190)||(21760751-21760790)
chr1 (151-189)||(27259714-27259752)
chr1 (112-189)||(16532386-16532462)
chr1 (151-188)||(34335989-34336026)
chr1 (151-186)||(16077596-16077631)
chr1 (151-189)||(25803949-25803987)
chr1 (151-189)||(26793093-26793131)
chr1 (151-189)||(48707299-48707337)
chr1 (151-188)||(31452132-31452169)
chr1 (151-187)||(15471307-15471343)
chr1 (151-189)||(27799442-27799480)
chr1 (151-189)||(39900288-39900326)
chr1 (158-190)||(12026319-12026351)
[»] chr6 (37 HSPs)
chr6 (23-193)||(34803151-34803320)
chr6 (21-193)||(3765974-3766145)
chr6 (21-193)||(32027881-32028052)
chr6 (21-193)||(32037940-32038111)
chr6 (21-189)||(35060221-35060388)
chr6 (47-193)||(29066343-29066489)
chr6 (47-193)||(29075356-29075502)
chr6 (21-189)||(800955-801122)
chr6 (21-193)||(13402318-13402489)
chr6 (21-193)||(22305581-22305752)
chr6 (21-139)||(6205322-6205440)
chr6 (21-139)||(11692289-11692407)
chr6 (21-139)||(27640018-27640136)
chr6 (29-141)||(12396612-12396724)
chr6 (47-193)||(29110325-29110473)
chr6 (55-190)||(14114823-14114957)
chr6 (62-193)||(24021195-24021325)
chr6 (104-193)||(29080120-29080209)
chr6 (111-193)||(29107962-29108044)
chr6 (62-133)||(2192437-2192508)
chr6 (151-190)||(33718846-33718885)
chr6 (151-190)||(34132370-34132409)
chr6 (151-189)||(3097888-3097926)
chr6 (151-189)||(18744344-18744382)
chr6 (151-189)||(20242517-20242555)
chr6 (151-189)||(22136501-22136539)
chr6 (108-193)||(30257731-30257815)
chr6 (154-190)||(5973408-5973444)
chr6 (155-189)||(17465662-17465696)
chr6 (151-189)||(20243961-20243999)
chr6 (151-189)||(22137945-22137983)
chr6 (157-189)||(26856475-26856507)
chr6 (151-183)||(28051196-28051228)
chr6 (151-185)||(14095438-14095472)
chr6 (151-189)||(21865272-21865310)
chr6 (151-188)||(5570924-5570961)
chr6 (157-185)||(24559664-24559692)
[»] scaffold0176 (1 HSPs)
scaffold0176 (21-189)||(1577-1744)
[»] scaffold0181 (1 HSPs)
scaffold0181 (21-190)||(24691-24859)
[»] scaffold0589 (1 HSPs)
scaffold0589 (21-133)||(2109-2221)
[»] scaffold0004 (1 HSPs)
scaffold0004 (47-189)||(39662-39803)
[»] scaffold0769 (1 HSPs)
scaffold0769 (53-141)||(1-89)
[»] scaffold0031 (1 HSPs)
scaffold0031 (62-193)||(85305-85435)
[»] scaffold0101 (1 HSPs)
scaffold0101 (151-193)||(36086-36128)
[»] scaffold0268 (1 HSPs)
scaffold0268 (62-139)||(14500-14577)
[»] scaffold0294 (1 HSPs)
scaffold0294 (151-189)||(793-831)


Alignment Details
Target: chr8 (Bit Score: 121; Significance: 3e-62; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 18440547 - 18440718
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  18440547 tgagacatcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatccacccggccattgtttc 18440646  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  18440647 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 18440718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 28 - 193
Target Start/End: Complemental strand, 26452280 - 26452116
Alignment:
Q  28 tcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatcta 127  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||  |||||||||  ||||||||||||||||||||| |||||||||||||||||    
T  26452280 tcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgtcgttgaattgcgcatgaacgtcgatccacccggccattgtttcaaatcta 26452181  T
Q  128 cacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||| ||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  26452180 cacgataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 26452116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 2416877 - 2416706
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||  ||||| ||||  ||||||||||||||||||||| ||||||||||    
T  2416877 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctctgccgtttaattgcgcatgaacgtcgatccacccggccattgtttc 2416778  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         ||||||||| |||||||||||||||||||||||||||||||||    
T  2416777 aaatctacacaataagaaatt-aaaaacaatcaatgaaagactcattcaaacatttcatcaaacacttgatgt 2416706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 42603416 - 42603245
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| | ||||||| |||||| | ||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||| || ||||||||||    
T  42603416 tgagaccttttaacgtcacaccaaggcaccgaaccttcaacctatgaggttctccgccgttgaattgtgcatgaacgtcgatccactcggccattgtttc 42603317  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  42603316 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 42603245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 23 - 193
Target Start/End: Original strand, 41857228 - 41857397
Alignment:
Q  23 agacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaa 122  Q
    |||| ||||||||| |||||| | || ||||||||||||||||||||||||||  | ||||||| |||||||||||||||||||||||||||||||||||    
T  41857228 agacctcttaacgtcacaccaaggcaacgaaccttcaacctctgaggttctccgtcattgaattgtgcatgaacgtcgatccacccgaccattgtttcaa 41857327  T
Q  123 atctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||||||||| |||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  41857328 atctacacagtaagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 41857397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 23 - 193
Target Start/End: Complemental strand, 41275354 - 41275185
Alignment:
Q  23 agacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaa 122  Q
    |||| ||||||| |||||||| | |||| |||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||   |||||||||||    
T  41275354 agacctcttaactttacaccaaggcaccaaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccaccccgtcattgtttcaa 41275255  T
Q  123 atctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  41275254 atctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 41275185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 28 - 193
Target Start/End: Complemental strand, 24861298 - 24861134
Alignment:
Q  28 tcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatcta 127  Q
    ||||||||||||| |  | ||||||||||| ||||||||||||||||| |||||| |||  ||||||||||||||||||||| |||||||||||||||||    
T  24861298 tcttaacgttacatccaggcaccgaacctttaacctctgaggttctccgccgttgcattgcgcatgaacgtcgatccacccggccattgtttcaaatcta 24861199  T
Q  128 cacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  24861198 cacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 24861134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 40702322 - 40702151
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| | ||||||| |||||| | ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||  ||||||||||    
T  40702322 tgagaccttttaacgtcacaccaaggcaccgaaccttcaacctctgaggttctccgcagttgaattgtgcatgaacgtcgatccacccagccattgtttc 40702223  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||| ||||| ||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  40702222 aaatctgcacaaaaagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 40702151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 16575654 - 16575487
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| |  |||||||||||||||||| |||||||||  ||||||||| |||||||||||||||||||||| |||||  |||    
T  16575654 tgagacctcttaacgttacaccaaggtaccgaaccttcaacctctaaggttctccgtcgttgaattgtgcatgaacgtcgatccacccggccattacttc 16575555  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||||||||| |||||||||         |||||||||||||||||||||||||||||||||||||||    
T  16575554 aaatctacacagtaagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttg 16575487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 22548225 - 22548105
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    ||||||||||||||||||||||| | || | |||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||| ||||||||||    
T  22548225 tgagacatcttaacgttacaccaaggcatcaaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccacccggccattgtttc 22548126  T
Q  121 aaatctacacaataagaaatt 141  Q
    |||||||||||||||||||||    
T  22548125 aaatctacacaataagaaatt 22548105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 15032576 - 15032747
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | |||| |||||||||||||||||||||||  ||||||||||  |||||||||||||||||||||||||||||||     
T  15032576 tgagacctcttaacgttacaccaaggcaccaaaccttcaacctctgaggttctctgccgttgaattgcgcatgaacgtcgatccacccgaccattgtttt 15032675  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||||||||| ||||||||| |         |||||| ||||||||||||||||||||||  ||||||||||||    
T  15032676 aaatctacataataagaaact-aaaaacaatcaatgtaaaactcattcaaacatttcattgaacacttgatgt 15032747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 23 - 178
Target Start/End: Complemental strand, 40414571 - 40414417
Alignment:
Q  23 agacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaa 122  Q
    |||| |||||||||||||||| | |||||||| ||||||||||| |||||||| |||||||||| ||||||||||||||||||||| ||||||| |||||    
T  40414571 agacctcttaacgttacaccaaggcaccgaactttcaacctctgcggttctccgccgttgaattgtgcatgaacgtcgatccacccaaccattgcttcaa 40414472  T
Q  123 atctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttca 178  Q
    |||||||||||||||||||         ||||||||||||||||||||||| ||||    
T  40414471 atctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacaattca 40414417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 30 - 193
Target Start/End: Original strand, 44943341 - 44943503
Alignment:
Q  30 ttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctaca 129  Q
    |||||||||||||| | | ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||||||| | |||||||||||||||||    
T  44943341 ttaacgttacaccaaggcgccgaaccttcaacctctgaggttctccgccgttgaattgtacatgaatgtcgatccacccggctattgtttcaaatctaca 44943440  T
Q  130 caataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||| |||||         ||||||||||||| |||||||||||||||||| ||||||||||    
T  44943441 caataaaaaatt-aaaagcaatcaatgaaaaactaattcaaacatttcatcaagcacttgatgt 44943503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 485510 - 485628
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||  |||||||||     
T  485510 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccaccccgccattgtttt 485609  T
Q  121 aaatctacacaataagaaa 139  Q
    |||||||||||||||||||    
T  485610 aaatctacacaataagaaa 485628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 23 - 189
Target Start/End: Complemental strand, 43693097 - 43692932
Alignment:
Q  23 agacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaa 122  Q
    |||| |||||| ||||||||| | |||||||| |||||||| ||  ||||||  |||||||||| ||||||||||||||||||||||||||||| |||||    
T  43693097 agacctcttaatgttacaccaaggcaccgaactttcaacctttgcagttctctgccgttgaattgtgcatgaacgtcgatccacccgaccattgcttcaa 43692998  T
Q  123 atctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||         ||||||||||||||||||||||| |||||||||||||||    
T  43692997 atctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacaattcatcaaacacttg 43692932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 21 - 186
Target Start/End: Original strand, 33799803 - 33799967
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||||| || | ||||||||||||||||| ||||||||||| |||||||||  |||||||||||||||  || |||||||||||||    
T  33799803 tgagacctcttaacgttacatcaaggcaccgaaccttcaacctatgaggttctccgccgttgaatcctgcatgaacgtcgatatactcgaccattgtttc 33799902  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacac 186  Q
    |||||||||||||||||||||         |||||||||||||||||| ||||||| |||||||||    
T  33799903 aaatctacacaataagaaatt-aaacacaatcaatgaaaaactcattccaacattttatcaaacac 33799967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 47 - 189
Target Start/End: Original strand, 43640297 - 43640438
Alignment:
Q  47 caccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctacacaataagaaattnnnnn 146  Q
    ||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||         
T  43640297 caccgaaccttcaacctcttaggttctccgccgttgaattctgcatgaacgtcgatccacccggccattgcttcaaatctacacaataagaaatt-aaac 43640395  T
Q  147 nnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
        |||||||||||||||||| || |||| ||||||||||||    
T  43640396 acaatcaatgaaaaactcattccaatattttatcaaacacttg 43640438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 19242414 - 19242534
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||| | | || |||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||| ||||||||||    
T  19242414 tgagacctcttaacgttacacaaaggcaacgaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacatcgatccacccggccattgtttc 19242513  T
Q  121 aaatctacacaataagaaatt 141  Q
    ||||||||| ||| |||||||    
T  19242514 aaatctacaaaattagaaatt 19242534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 19315598 - 19315718
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||| | | || |||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||| ||||||||||    
T  19315598 tgagacctcttaacgttacacaaaggcaacgaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacatcgatccacccggccattgtttc 19315697  T
Q  121 aaatctacacaataagaaatt 141  Q
    ||||||||| ||| |||||||    
T  19315698 aaatctacaaaattagaaatt 19315718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 26484539 - 26484419
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | |||||||| |||||||||||||||||||| |||||||||| || |||||  |||||||||||| ||||||||||    
T  26484539 tgagacctcttaacgttacaccaaggcaccgaactttcaacctctgaggttctccgccgttgaattgtggatgaatatcgatccacccggccattgtttc 26484440  T
Q  121 aaatctacacaataagaaatt 141  Q
    ||||||||||||| |||||||    
T  26484439 aaatctacacaattagaaatt 26484419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 34614915 - 34614795
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | || |||| ||||||||||||||||||||| |||||||||| |||||||||||  ||||||||| ||||||||||    
T  34614915 tgagacctcttaacgttacaccaaggcatcgaaacttcaacctctgaggttctccgccgttgaattgtgcatgaacgttaatccacccggccattgtttc 34614816  T
Q  121 aaatctacacaataagaaatt 141  Q
    ||||||||||||| |||||||    
T  34614815 aaatctacacaattagaaatt 34614795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 38034177 - 38034297
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | || ||||| |||||||||||||||||||| | |||||||| ||||||||| |||||||||||| ||||||||||    
T  38034177 tgagacctcttaacgttacaccaaggcatcgaactttcaacctctgaggttctccgctgttgaattgtgcatgaacttcgatccacccggccattgtttc 38034276  T
Q  121 aaatctacacaataagaaatt 141  Q
    ||||||||||||| |||||||    
T  38034277 aaatctacacaattagaaatt 38034297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 42169212 - 42169332
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||||| || | || | |||||||||||| ||||||||||| ||||||| || |||||||||||||||||||||||||||||||||    
T  42169212 tgagacctcttaacgttacatcaaggcatcaaaccttcaacctttgaggttctccgccgttgagttgtgcatgaacgtcgatccacccgaccattgtttc 42169311  T
Q  121 aaatctacacaataagaaatt 141  Q
    ||||||||||||| |||||||    
T  42169312 aaatctacacaattagaaatt 42169332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 41363618 - 41363498
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||| ||| | || |||||||||||||| ||||||||||| |||||||||| ||||| |||||||||||||||  |||||| |||    
T  41363618 tgagacctcttaacgttactccaaggcatcgaaccttcaacctatgaggttctccgccgttgaattgtgcataaacgtcgatccacccagccattgcttc 41363519  T
Q  121 aaatctacacaataagaaatt 141  Q
    |||||||||||||||||||||    
T  41363518 aaatctacacaataagaaatt 41363498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 30 - 189
Target Start/End: Original strand, 28706403 - 28706561
Alignment:
Q  30 ttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctaca 129  Q
    ||||||||||| || | ||||||||||||||||||||||||||||| || ||||||| |||| |||| |||||||||||| | |||| ||||||||||||    
T  28706403 ttaacgttacatcaaggcaccgaaccttcaacctctgaggttctccgccattgaattctgcaagaacttcgatccacccggcaattgcttcaaatctaca 28706502  T
Q  130 caataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||||||||||         |||||||||||||||  ||||||||| ||||||||||||    
T  28706503 caataagaaatt-aaacacagtcaatgaaaaactcaaacaaacattttatcaaacacttg 28706561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 57 - 189
Target Start/End: Original strand, 3589542 - 3589673
Alignment:
Q  57 tcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctacacaataagaaattnnnnnnnnntcaatg 156  Q
    |||||||||||||||||| ||||||||||| ||| |||||||||| |    |  |||||||||||||||||||||||||||||||         || |||    
T  3589542 tcaacctctgaggttctctaccgttgaattgtgcttgaacgtcgaacatatcagccattgtttcaaatctacacaataagaaatt-aaaaacaatcgatg 3589640  T
Q  157 aaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||| |||||||||||||||||||||||||||    
T  3589641 aaaaattcattcaaacatttcatcaaacacttg 3589673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 48 - 189
Target Start/End: Original strand, 31172095 - 31172235
Alignment:
Q  48 accgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctacacaataagaaattnnnnnn 147  Q
    ||||||||||||||||||||||||||||||| ||||||| ||| |||||||||| | |   | ||||||||||  |||||||| ||||||||||          
T  31172095 accgaaccttcaacctctgaggttctccacctttgaattgtgcttgaacgtcgaacaaattgtccattgtttcggatctacaccataagaaatt-aaaaa 31172193  T
Q  148 nnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
       | || |||||| |||||||||||||||||||||||||||    
T  31172194 caataaacgaaaaaatcattcaaacatttcatcaaacacttg 31172235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 37780476 - 37780434
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  37780476 tcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 37780434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 12505102 - 12505140
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12505102 tcaatgaaaaactcattcaaacatttcatcaaacacttg 12505140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 8751600 - 8751562
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  8751600 tcaatgaaaaactcattcaaacatttgatcaaacacttg 8751562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 24630271 - 24630309
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  24630271 tcaatgaaaaactcattcaaatatttcatcaaacacttg 24630309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 27783279 - 27783242
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacactt 188  Q
    |||||||||||||||||| |||||||||||||||||||    
T  27783279 tcaatgaaaaactcattctaacatttcatcaaacactt 27783242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 32109311 - 32109347
Alignment:
Q  153 aatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||||||| ||||||||||    
T  32109311 aatgaaaaactcattcaaacatttcaccaaacacttg 32109347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 40415217 - 40415158
Alignment:
Q  23 agacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttg 82  Q
    |||| ||||||||||||| || | |||||||| ||||||||||| |||||||| ||||||    
T  40415217 agacctcttaacgttacatcaaggcaccgaactttcaacctctgcggttctccgccgttg 40415158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 3e-62; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 35491591 - 35491420
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  35491591 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatccacccgaccattgtttc 35491492  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  35491491 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 35491420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 40678865 - 40679036
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  40678865 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatccacccgaccattgtttc 40678964  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||| ||||    
T  40678965 aaatctacacaataagaaatt-aaaaaaaatcaatgaaaaactcattcaaacatttcatcaaacacttaatgt 40679036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 2919613 - 2919784
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | |||||||||||||||||||||||| |||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  2919613 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggtactctgccgttgaataatgcatgaacgtcgatccacccgaccattgtttc 2919712  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||| ||||||||||||         ||||| |||||||||||||||||||||||||||||||||||||    
T  2919713 aaatctactcaataagaaatt-aaaaacaatcaataaaaaactcattcaaacatttcatcaaacacttgatgt 2919784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 22001802 - 22001631
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||     
T  22001802 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatccatccgaccattgtttt 22001703  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||||||||||||||||||| |         ||||||||||||||||||| |||||||||| ||||||||||||    
T  22001702 aaatctacacaataagaaact-aaaaacaatcaatgaaaaactcattcagacatttcatcgaacacttgatgt 22001631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 29067686 - 29067515
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||  |||||||| ||||||||||||||||||||||     
T  29067686 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacatcgatccacccgaccattgtttt 29067587  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||||||||||||||||||| |         ||||||||||||||||| |||||||||||||||||||||||||    
T  29067586 aaatctacacaataagaaact-aaaaacaatcaatgaaaaactcatttaaacatttcatcaaacacttgatgt 29067515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 34638922 - 34638751
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||| |||||||||     
T  34638922 tgagacctcttaacgttacaccaatgcaccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccacccgtccattgtttt 34638823  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||| ||||||||||||||||||||||||||||    
T  34638822 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactctttcaaacatttcatcaaacacttgatgt 34638751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 3941693 - 3941522
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||| |||| | |||||||| |||||||||| ||||||||| |||||||||| |||||||||||||||||| ||| ||||||||||    
T  3941693 tgagacctcttaacgttaaaccaaggcaccgaacattcaacctctaaggttctccgccgttgaattgtgcatgaacgtcgatccatccggccattgtttc 3941594  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||| ||||||||    
T  3941593 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacgcttgatgt 3941522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 6901922 - 6901755
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||| |||    
T  6901922 tgagacctcttagcgttacaccatggcaccgaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatccacccggccattgcttc 6901823  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||| ||||||||||         ||||||||||||  |||||||||||||||||||||||||    
T  6901822 aaatctacaccataagaaatt-aaaaacaatcaatgaaaaacgtattcaaacatttcatcaaacacttg 6901755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 10364887 - 10365058
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | |||||||||||||||||| |||||||||| |||||||||| |||||||||||| |||||| || |||||||||     
T  10364887 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctcagaggttctccgccgttgaattgtgcatgaacgtctatccactcggccattgtttt 10364986  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
     ||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  10364987 gaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 10365058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 19471884 - 19472051
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||| | | ||||||||||||| ||||||||||||||| |||||||||| ||| |||||||||||||||||| ||||||||||    
T  19471884 tgagacctcttaacgttacacaaaggcaccgaaccttcatcctctgaggttctccgccgttgaattgtgcgtgaacgtcgatccacccggccattgtttc 19471983  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||||||||||| |||||||         |||||||||||||||||||||||||||||||||||||||    
T  19471984 aaatctacacaattagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttg 19472051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 21 - 188
Target Start/End: Complemental strand, 16706923 - 16706757
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||| |||| | |||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||| |||||||| |||||    
T  16706923 tgagacctcttaacgttataccaaggcaccgaaccttcaacctctgagcttctcccctgttgaattatgcatgaacgtcgatccatccgaccatagtttc 16706824  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacactt 188  Q
    ||||||||||||||| |||||         ||||||||||||||||||||||||||||||||||||||    
T  16706823 aaatctacacaataaaaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacactt 16706757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 31770319 - 31770148
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||| |||||| |||| |  | ||||||| |||||||||||||||||||||| ||||||||||    
T  31770319 tgagacctcttaacgttacaccaaggcaccgaaccttcaacgtctgagcttcttcgtcattgaattgtgcatgaacgtcgatccacccggccattgtttc 31770220  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         ||| |||||||||||||||||||||||||||||||||||||||    
T  31770219 aaatctacacaataagaaatt-aaaaacaatcattgaaaaactcattcaaacatttcatcaaacacttgatgt 31770148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 37312745 - 37312865
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||| |||||||| | ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  37312745 tgagacctcttaacattacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatccacccgaccattgtttc 37312844  T
Q  121 aaatctacacaataagaaatt 141  Q
    ||||||||||||| |||||||    
T  37312845 aaatctacacaattagaaatt 37312865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 39393847 - 39393676
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||| || |||||||||| ||||||||||  ||||||||||||||||||||  ||||||||||    
T  39393847 tgagacttcttaacgttacaccaaggcaccgaaccttcaacttccgaggttctccgccgttgaattgcgcatgaacgtcgatccacccagccattgtttc 39393748  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||||||||| |||||||||||         |||||||||||||||||||||||||||||| ||||||||||||    
T  39393747 aaatctacataataagaaatt-aaaaataatcaatgaaaaactcattcaaacatttcatctaacacttgatgt 39393676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 41499332 - 41499502
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| | ||||||| |||||||| ||||||||||||||||||| ||||||||| || ||||||| |||||||||||| ||||||||| ||||||||||    
T  41499332 tgagaccttttaacgtcacaccatgacaccgaaccttcaacctctaaggttctccgccattgaattgtgcatgaacgtctatccacccggccattgtttc 41499431  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||||||||||||||||||  |         | |||||||||||||||||||||||||||||||||||||||||    
T  41499432 aaatctacacaataagaa--ttaaaaacaattaatgaaaaactcattcaaacatttcatcaaacacttgatgt 41499502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 20148074 - 20147907
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||| |||| | ||||||||||||||||||||||||||||  |||||||||| ||||||||||||||| |||||||||||||||||    
T  20148074 tgagacctcttaacgttataccaaggcaccgaaccttcaacctctgaggttctctgccgttgaattgtgcatgaacgtcgattcacccgaccattgtttc 20147975  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||||||||||||| |||||         |||||||||||||| || |||||||||| ||||||||||    
T  20147974 aaatctacacaataaaaaatt-aaaaacaatcaatgaaaaactcgtttaaacatttcaccaaacacttg 20147907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 22493227 - 22493060
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||||| || | ||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||  |||    
T  22493227 tgagacctcttaacgttacatcaaggcaccgaaccttcaccctctgaggttctccgccgttgaattttgcatgaacgtcgatccacccgaccattacttc 22493128  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||||||||||||||| |||         |||||||||||||||||| ||||||| ||||||||||||    
T  22493127 aaatctacacaataagagatt-aaacacaatcaatgaaaaactcattccaacattttatcaaacacttg 22493060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 39800092 - 39800263
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||| ||| |||||||||     
T  39800092 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccatccggccattgtttt 39800191  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
     |||||||||||||||||| |         | ||| |||||||||||||||||||||||||||||||||||||    
T  39800192 taatctacacaataagaaact-aaaaacaatgaatcaaaaactcattcaaacatttcatcaaacacttgatgt 39800263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 29906538 - 29906420
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||||| || | ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||| |||    
T  29906538 tgagacctcttaacgttacatcaaggcaccgaaccttcaacctctgaggttctccgccgttgaattctgcatgaacgtcgatccacccggccattgcttc 29906439  T
Q  121 aaatctacacaataagaaa 139  Q
    |||||||||||||||||||    
T  29906438 aaatctacacaataagaaa 29906420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 42241351 - 42241515
Alignment:
Q  23 agacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaa 122  Q
    |||| |||||||||||||| | | |||||||||||||||||||| |||||||  |||||||||| |||| |||||||||||||||||||||||| |||||    
T  42241351 agacctcttaacgttacactaaggcaccgaaccttcaacctctgcggttctctgccgttgaattgtgcaggaacgtcgatccacccgaccattgcttcaa 42241450  T
Q  123 atctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacactt 188  Q
    |||||||||||||||||||         ||||||||||| ||||||||||| ||||||||||||||    
T  42241451 atctacacaataagaaatt-aaaaacaatcaatgaaaaattcattcaaacaattcatcaaacactt 42241515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 29111114 - 29110948
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||| |||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||| ||     
T  29111114 tgagacctcttaacgttacaccaagacactgaac-ttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatccacccggccattgcttt 29111016  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||| ||||||||||||||||         ||||||||||||||||||||||| |||||||||||||||    
T  29111015 aaatatacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacaattcatcaaacacttg 29110948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 33403974 - 33403807
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||||   | | ||||||||||||||||||||| ||||||  |||||||||| |||||||| ||||||||||||| ||||||||||    
T  33403974 tgagacctcttaacgttactataaggcaccgaaccttcaacctctgacgttctctgccgttgaattgtgcatgaatgtcgatccacccggccattgtttc 33403875  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||         ||||||||||||||||| |||||||||||||||||||||    
T  33403874 aaatctacacaataagaaatt-aaaaataatcaatgaaaaactcattgaaacatttcatcaaacacttg 33403807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 42119968 - 42119801
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||||| || | || | |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||| |||    
T  42119968 tgagacctcttaacgttacatcaaggcaacaaaccttcaacctctgaggttctccgccgttgaattctgcatgaacgtcgatccacccggccattgcttc 42119869  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||| ||||||         |||||||||||||||||| ||||||| ||||||||||||    
T  42119868 aaatctacacaataggaaatt-aaacacaatcaatgaaaaactcattccaacattttatcaaacacttg 42119801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 3937314 - 3937432
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||  |||||||||     
T  3937314 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccaccccgccattgtttt 3937413  T
Q  121 aaatctacacaataagaaa 139  Q
    |||||||||||||||||||    
T  3937414 aaatctacacaataagaaa 3937432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 17796354 - 17796525
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgacc---attgt 117  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||| ||   ||||     
T  17796354 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatctacccggccattattgc 17796453  T
Q  118 ttcaaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattc-aaacatttcatcaaacacttg 189  Q
    ||||||||||||||||||||||||         |||||||||| ||||||| |||||||||||||||||||||    
T  17796454 ttcaaatctacacaataagaaatt-aaaaataatcaatgaaaacctcattcaaaacatttcatcaaacacttg 17796525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 23 - 140
Target Start/End: Complemental strand, 16581776 - 16581659
Alignment:
Q  23 agacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaa 122  Q
    |||| |||||| ||||||||| | ||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||| | ||||||||||    
T  16581776 agacctcttaatgttacaccaaggcaccgaaccttcaacctctgaggttcttcgccgttgaattgtgcatgaacgtcgatccacccggctattgtttcaa 16581677  T
Q  123 atctacacaataagaaat 140  Q
    ||||||||||||||||||    
T  16581676 atctacacaataagaaat 16581659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 34521933 - 34522053
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||| ||||||||| | | ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| || ||||||||||    
T  34521933 tgagacctcttaatgttacaccaaggcgccgaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatccacgcggccattgtttc 34522032  T
Q  121 aaatctacacaataagaaatt 141  Q
    ||||||||||||| |||||||    
T  34522033 aaatctacacaattagaaatt 34522053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 17424745 - 17424627
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||  ||||||||||||||||||||  |||||||||     
T  17424745 tgagacctcttaacgttacaccaaggcaccgaaccttaaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccaccccgccattgtttt 17424646  T
Q  121 aaatctacacaataagaaa 139  Q
    |||||||||||||||||||    
T  17424645 aaatctacacaataagaaa 17424627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 43982812 - 43982694
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||  || |||||||||||||||||  |||||||||     
T  43982812 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgcgcttgaacgtcgatccaccccgccattgtttt 43982713  T
Q  121 aaatctacacaataagaaa 139  Q
    |||||||||||||||||||    
T  43982712 aaatctacacaataagaaa 43982694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 6976794 - 6976676
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | || |  ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  6976794 tgagacctcttaacgttacaccaaggcatc--accttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatccacccggccattgtttc 6976697  T
Q  121 aaatctacacaataagaaatt 141  Q
    ||||||||||||| |||||||    
T  6976696 aaatctacacaattagaaatt 6976676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 27130759 - 27130879
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||| ||||| | || |||||||||||||||||||||||| | ||||| |||| |||||||||||||||||||||||| ||||||||    
T  27130759 tgagacctcttaacgttgcaccaaggcatcgaaccttcaacctctgaggttcttcgccgtttaattttgcatgaacgtcgatccacccgacaattgtttc 27130858  T
Q  121 aaatctacacaataagaaatt 141  Q
    ||||||||||||| |||||||    
T  27130859 aaatctacacaattagaaatt 27130879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 23 - 189
Target Start/End: Original strand, 12968554 - 12968719
Alignment:
Q  23 agacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaa 122  Q
    |||| ||||||||||||| || | ||  |||||||| |||||||||||||||  |||||||||| |||||||||||||| ||||||| |||||| |||||    
T  12968554 agacctcttaacgttacatcaaggcattgaaccttccacctctgaggttctctgccgttgaattctgcatgaacgtcgacccacccggccattgcttcaa 12968653  T
Q  123 atctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||         |||||||||||||||||| ||||||| ||||||||||||    
T  12968654 atctacacaataagaaatt-aaacacaatcaatgaaaaactcattccaacattttatcaaacacttg 12968719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 10360449 - 10360569
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||| |||| | || ||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||  |||||| |||    
T  10360449 tgagacctcttaacgttataccaaggcatcgaaccttcaacctcagaggttctccgccgttgaattgtgcatgaacgtcgatccaccccgccattgcttc 10360548  T
Q  121 aaatctacacaataagaaatt 141  Q
    |||| ||||||||||||||||    
T  10360549 aaatttacacaataagaaatt 10360569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 53 - 189
Target Start/End: Complemental strand, 32734572 - 32734437
Alignment:
Q  53 accttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctacacaataagaaattnnnnnnnnntc 152  Q
    ||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||  |||||| ||||||||||||||||||||||||         ||    
T  32734572 accttcaacctctgaggttctccgccgttgaattctgcatgaatgtcgatccaccccgccattgcttcaaatctacacaataagaaatt-aagcacaatc 32734474  T
Q  153 aatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||| |||||||||| |||||||||    
T  32734473 aatgaaaaactcattccaacatttcatgaaacacttg 32734437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 49 - 189
Target Start/End: Complemental strand, 16253404 - 16253265
Alignment:
Q  49 ccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctacacaataagaaattnnnnnnn 148  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||| |    ||  ||||| ||||||||||||||||||||||||           
T  16253404 ccgaaccttcaacctctgaggttctccaccgttgaattgtacatgaacgtcgaacatatcggtcattgcttcaaatctacacaataagaaatt-aaaaac 16253306  T
Q  149 nntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
      |||||||||||||||||||||||||| ||||||||||||    
T  16253305 aatcaatgaaaaactcattcaaacattttatcaaacacttg 16253265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 50 - 184
Target Start/End: Original strand, 16413384 - 16413517
Alignment:
Q  50 cgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctacacaataagaaattnnnnnnnn 149  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||| |    ||  ||||| ||||||||||||||||||||||||            
T  16413384 cgaaccttcaacctctgaggttctccaccgttgaattgtacatgaacgtcgaacatatcggtcattgcttcaaatctacacaataagaaatt-aaaaaca 16413482  T
Q  150 ntcaatgaaaaactcattcaaacatttcatcaaac 184  Q
     |||||||||||||||||||||||||| |||||||    
T  16413483 atcaatgaaaaactcattcaaacattttatcaaac 16413517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 26859001 - 26858959
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  26859001 tcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 26858959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 154 - 193
Target Start/End: Complemental strand, 16581322 - 16581283
Alignment:
Q  154 atgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  16581322 atgaaaaactcattcaaacatttcatcaaacacttgatgt 16581283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 26617862 - 26617900
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26617862 tcaatgaaaaactcattcaaacatttcatcaaacacttg 26617900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 18878335 - 18878297
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  18878335 tcaatgaaaaactcattcaaacatttcatcgaacacttg 18878297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 31992322 - 31992359
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacactt 188  Q
    |||||||||||||||||||| |||||||||||||||||    
T  31992322 tcaatgaaaaactcattcaagcatttcatcaaacactt 31992359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 37058686 - 37058649
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacactt 188  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  37058686 tcaatgaaaaactcattcaaacatttcattaaacactt 37058649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 28472599 - 28472563
Alignment:
Q  157 aaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||||| ||||||||||||    
T  28472599 aaaaactcattcaaacatttcatcgaacacttgatgt 28472563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 157 - 188
Target Start/End: Original strand, 15892040 - 15892071
Alignment:
Q  157 aaaaactcattcaaacatttcatcaaacactt 188  Q
    ||||||||||||||||||||||||||||||||    
T  15892040 aaaaactcattcaaacatttcatcaaacactt 15892071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 28747332 - 28747371
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttga 190  Q
    ||||||||||||||||| ||||||||||||||| ||||||    
T  28747332 tcaatgaaaaactcatttaaacatttcatcaaaaacttga 28747371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 5420425 - 5420363
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttga 83  Q
    |||||| |||||||| ||||||| | || | ||||||||| |||||||||||||| |||||||    
T  5420425 tgagacctcttaacgatacaccaaggcatcaaaccttcaatctctgaggttctccgccgttga 5420363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 18036550 - 18036588
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  18036550 tcaatgaaaaactcattcaaacattttgtcaaacacttg 18036588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 20530143 - 20530181
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||||||||||||||| |||||||||||||| ||||||    
T  20530143 tcaatgaaaaactcattaaaacatttcatcaaccacttg 20530181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 20988348 - 20988310
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||||||| |||||| |||||    
T  20988348 tcaatgaaaaactcattcaaacattttatcaaatacttg 20988310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 185
Target Start/End: Original strand, 27650818 - 27650852
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaaca 185  Q
    ||||||||||||||||||||| |||||||||||||    
T  27650818 tcaatgaaaaactcattcaaatatttcatcaaaca 27650852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 188
Target Start/End: Original strand, 36194597 - 36194627
Alignment:
Q  158 aaaactcattcaaacatttcatcaaacactt 188  Q
    |||||||||||||||||||||||||||||||    
T  36194597 aaaactcattcaaacatttcatcaaacactt 36194627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 185
Target Start/End: Complemental strand, 40501121 - 40501087
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaaca 185  Q
    ||||||||||||||||||||| |||||||||||||    
T  40501121 tcaatgaaaaactcattcaaatatttcatcaaaca 40501087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 1e-61; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 23 - 193
Target Start/End: Original strand, 45100720 - 45100890
Alignment:
Q  23 agacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaa 122  Q
    |||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  45100720 agacctcttaacgttacaccaagacaccgaaccttcaacctctgaggttctccaccgttgaattgtgcatgaacgtcgatccacccggccattgtttcaa 45100819  T
Q  123 atctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||         | |||||||||||||||||||||||||||||||||||||||||    
T  45100820 atctacacaataagaaattaaaaaaaaattaatgaaaaactcattcaaacatttcatcaaacacttgatgt 45100890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 49610455 - 49610284
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||    
T  49610455 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattacgcatgaacgtcgatccacccggccattgtttc 49610356  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  49610355 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 49610284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 52569661 - 52569832
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||    
T  52569661 tgagacctcttaacgttacaccaagacaccgaaccttcaacctttgaggttctccgccgttgaattgtgcatgaacgtcgatccaccccaccattgtttc 52569760  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  52569761 aaatctacacaataagaaatt-aaatacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 52569832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 46346828 - 46346999
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||    
T  46346828 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgctgttgaattgtgcatgaacgtcgatccacccgaccattgtttc 46346927  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||           |||||| ||||||||||||||||||||||||||||||||||||    
T  46346928 aaatctacacaataagaaa-cgaaaaacaatcaatggaaaactcattcaaacatttcatcaaacacttgatgt 46346999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 2647129 - 2647300
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||     
T  2647129 tgagacatcttaacgttacaccaaggcaccgaaccttcaaactctgaggttctccgccgttgaattgcgcatgaacgtcgatccacccgaccattgtttt 2647228  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||||||||||||||||||| |         |||||||||||||||||||||||||||||| ||||||||||||    
T  2647229 aaatctacacaataagaaact-aaaaacaatcaatgaaaaactcattcaaacatttcatcgaacacttgatgt 2647300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 4004340 - 4004511
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| | ||||||||  ||||||||||||||||||||| |||||||||     
T  4004340 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgctgttgaattgcgcatgaacgtcgatccacccggccattgtttt 4004439  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  4004440 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 4004511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 24702524 - 24702695
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||| ||||||||||||||||| || |||||||  ||||||||||||||||||||| ||||||||||    
T  24702524 tgagacctcttaacgttacaccaaggcaccgaacctttaacctctgaggttctccgccattgaattgcgcatgaacgtcgatccacccggccattgtttc 24702623  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  24702624 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 24702695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 41577894 - 41577723
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | | || |||||||||||||||||||||||| ||||||| || |||||||||||||||||||||| ||||||||||    
T  41577894 tgagacctcttaacgttacaccaagacgccaaaccttcaacctctgaggttctccgccgttgatttgtgcatgaacgtcgatccacccggccattgtttc 41577795  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  41577794 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 41577723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 49218989 - 49219160
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | |||||||||||||||||||||||||||||  |||||||||  ||||||||||||||||||||| ||| ||||||    
T  49218989 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgtcgttgaattgcgcatgaacgtcgatccacccggccaatgtttc 49219088  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  49219089 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 49219160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 2428453 - 2428282
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||| ||||||||||| |||||||||| ||||||||||    
T  2428453 tgagacctcttaacgttacaccaagtcaccgaaccttcaacctcagaggttctccgccgttgaattgtgcatgaacgtagatccacccggccattgtttc 2428354  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||||||||||||||| |||||         ||||||||||||  |||||||||||||||||||||||||||||    
T  2428353 aaatctacacaataaaaaatt-aaaaacaatcaatgaaaaacgaattcaaacatttcatcaaacacttgatgt 2428282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 19453482 - 19453653
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||| | || ||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  19453482 tgagacctcttaacgttacactaagttacctaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatccacccggccattgtttc 19453581  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         ||||||||||||||||||||||||| ||||| |||||||||||    
T  19453582 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacattccatcagacacttgatgt 19453653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 36134974 - 36134803
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||     
T  36134974 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaatgtcgatccacccgaccattgtttt 36134875  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||| ||||||||||||||||         ||||||||||||||||| |||||||||||||||||||||||||    
T  36134874 aaatttacacaataagaaatt-aaaaacaatcaatgaaaaactcatttaaacatttcatcaaacacttgatgt 36134803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 28 - 189
Target Start/End: Original strand, 6464605 - 6464765
Alignment:
Q  28 tcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatcta 127  Q
    |||||||||||||||| | ||| ||||||||||||||||||||||||  || ||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  6464605 tcttaacgttacaccaaggcactgaaccttcaacctctgaggttctctgccattgaattgtgcatgaacgtcgatccacccgaccattgcttcaaatcta 6464704  T
Q  128 cacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||||||||||||         |||||||||||||||||||||||||||||||||||||||    
T  6464705 cacaataagaaatt-aaaagcaatcaatgaaaaactcattcaaacatttcatcaaacacttg 6464765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 28 - 193
Target Start/End: Complemental strand, 7246053 - 7245889
Alignment:
Q  28 tcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatcta 127  Q
    |||||||||||||||| | ||| ||||||||||||| ||||||||||| |||||||||| ||||| ||||||||||||||||||||||||| ||||||||    
T  7246053 tcttaacgttacaccaaggcactgaaccttcaacctatgaggttctccgccgttgaattgtgcattaacgtcgatccacccgaccattgttccaaatcta 7245954  T
Q  128 cacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||||||||||||||         ||||||||||||||||||||||||||||| |||||||||||||    
T  7245953 cacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcataaaacacttgatgt 7245889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 7954169 - 7954002
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | || || ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||| |||    
T  7954169 tgagacctcttaacgttacaccaaggcaacggaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatccacccggccattgcttc 7954070  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||| ||||||||||         |||||||||||||||||||||||||||||||||||||||    
T  7954069 aaatctacaccataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttg 7954002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 42950273 - 42950440
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||||| || | ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||    
T  42950273 tgagacctcttaacgttacatcaaggcaccgaaccttcaacctctgaggttctccgccgttgaattctgcatgaacgtcgatccacccgaccattgcttc 42950372  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||         |||||||||||||||||  ||||||| ||||||||||||    
T  42950373 aaatctacacaataagaaatt-aaacacaatcaatgaaaaactcatttcaacattttatcaaacacttg 42950440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 23 - 189
Target Start/End: Complemental strand, 37281416 - 37281251
Alignment:
Q  23 agacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaa 122  Q
    |||| |||||||||||||||| | |||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||| |||||| |||||    
T  37281416 agacctcttaacgttacaccaaggcaccgaaccttcaacctctgcggttctccgccgttgaattatgcatgaacgtcgattcacccggccattgcttcaa 37281317  T
Q  123 atctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||||||||||||||| |         ||||||||||||||||||||||| |||||||||||||||    
T  37281316 atctacacaataagaaact-aaaaacaatcaatgaaaaactcattcaaacaattcatcaaacacttg 37281251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 13896123 - 13896294
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||| ||||||||| | ||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||| ||| || |||||||    
T  13896123 tgagacctcttaatgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgtcgaattgtgcatgaacgtcgatccatccggcctttgtttc 13896222  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||| ||||||||||||         || ||||||||||||||||||||||||||||||||||||||||    
T  13896223 aaatctacgcaataagaaatt-aaaaaaaatcgatgaaaaactcattcaaacatttcatcaaacacttgatgt 13896294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 43477009 - 43476839
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||| |||||| | | | ||||||||||||||||||||||||| ||||||||||  |||||||| |||||||||||||||||||||||    
T  43477009 tgagacctcttaacgt-acaccaaggccctgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacatcgatccacccgaccattgtttc 43476911  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||| ||||||||||||||||||||||||||||||    
T  43476910 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaacccattcaaacatttcatcaaacacttgatgt 43476839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 51695859 - 51696030
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||| ||||||||||| | || |||||||  ||||||||||||||||||||| ||||||||||    
T  51695859 tgagacctcttaacgttacaccaaggcaccgaaccttcaacttctgaggttcttcgccattgaattgcgcatgaacgtcgatccacccgcccattgtttc 51695958  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||| ||||||||||||||||         ||||||||||||||||||||| |||||||||||||||||||||    
T  51695959 aaatttacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaatatttcatcaaacacttgatgt 51696030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 21 - 188
Target Start/End: Complemental strand, 47065653 - 47065487
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||| |||||| || | |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  47065653 tgagacctcttaatgttacatcaaggcaccaaaccttcaacctctgaggttctccaccgttgaattctgcatgaacgtcgatccacccgaccattgcttc 47065554  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacactt 188  Q
    |||||||||||||||||||||         |||||||||||||||||| ||||||| | |||||||||    
T  47065553 aaatctacacaataagaaatt-aaacacaatcaatgaaaaactcattccaacattttaccaaacactt 47065487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 21 - 187
Target Start/End: Original strand, 774591 - 774756
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||| |||||||||| | ||| |||||||||||| |||||||||||| | |||  ||| |||||||||||||||||||||||||||||||||    
T  774591 tgagacctcttagcgttacaccaaggcactgaaccttcaaccgctgaggttctccgctgttcgattgtgcatgaacgtcgatccacccgaccattgtttc 774690  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacact 187  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||    
T  774691 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacact 774756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 23 - 193
Target Start/End: Original strand, 2268749 - 2268917
Alignment:
Q  23 agacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaa 122  Q
    |||| |||||||||||||||| | |||||||||||||||||||| |||||||| ||||||||||  ||||||||||||||||||||| ||||||||| ||    
T  2268749 agacctcttaacgttacaccaaggcaccgaaccttcaacctctg-ggttctccgccgttgaattgcgcatgaacgtcgatccacccggccattgttttaa 2268847  T
Q  123 atctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||||||||||||||||| |         ||||||||||||||||||||||||||||||||||| |||||||    
T  2268848 atctacacaataagaaact-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacaattgatgt 2268917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 28 - 193
Target Start/End: Original strand, 34647527 - 34647690
Alignment:
Q  28 tcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatcta 127  Q
    |||||||||||||||| | |||||||| ||||||||||||||||||||||| ||||||| |||||||||||  ||||||| |||||||||||||||||||    
T  34647527 tcttaacgttacaccaagacaccgaacattcaacctctgaggttctccaccattgaattgtgcatgaacgttcatccaccagaccattgtttcaaatcta 34647626  T
Q  128 cacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||| |         || ||||||||||||||||||||||||||||||||||||||||    
T  34647627 cacaataagaaa-taaaaaacaatc-atgaaaaactcattcaaacatttcatcaaacacttgatgt 34647690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 23 - 189
Target Start/End: Original strand, 44835742 - 44835907
Alignment:
Q  23 agacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaa 122  Q
    |||| ||||||||||||| || | ||||||||||||||||||||||||||||   ||||||||| | |||||||||||||||||||||||||||||||||    
T  44835742 agacctcttaacgttacatcaaggcaccgaaccttcaacctctgaggttctctgtcgttgaattctacatgaacgtcgatccacccgaccattgtttcaa 44835841  T
Q  123 atctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||         |||||||||||||||||| || |||||||||||||||||    
T  44835842 atctacacaataagaaatt-aaacacaatcaatgaaaaactcattccaatatttcatcaaacacttg 44835907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 3495282 - 3495453
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| | |||||||||||||| |  |||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||| |||||||||     
T  3495282 tgagaccttttaacgttacaccaaggtaccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccacccggccattgtttt 3495381  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||||||||||||||||||| |         |||||| ||||||||||||||||||||||| ||||||||||||    
T  3495382 aaatctacacaataagaaact-aaaaacaatcaatgtaaaactcattcaaacatttcatcgaacacttgatgt 3495453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 27186914 - 27186747
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||| ||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||  |||||| ||    
T  27186914 tgagacctcttaacgttacaccaagacactgaaccttcaacctctaaggttctccgccgttgaattgtgcatgaacgtcgatccacccggacattgtctc 27186815  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||         ||||||||||| |||||||||||||| ||||||||||||    
T  27186814 aaatctacacaataagaaatt-aaaaataatcaatgaaaaattcattcaaacattttatcaaacacttg 27186747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 47760144 - 47760264
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||| ||||||||||    
T  47760144 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgcaattgaattatgcatgaacgtcgatccacccggccattgtttc 47760243  T
Q  121 aaatctacacaataagaaatt 141  Q
    ||||||||||||| |||||||    
T  47760244 aaatctacacaattagaaatt 47760264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 19 - 189
Target Start/End: Original strand, 8633610 - 8633779
Alignment:
Q  19 catgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtt 118  Q
    |||||||| |||||||||||||||| | |||| ||| || ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||| |    
T  8633610 catgagacctcttaacgttacaccaagacaccaaacatttaacctatgaggttctccgccgttgaattgtgcatgaacgtcgatccacccgaccattgct 8633709  T
Q  119 tcaaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||| ||||||||||||||||         ||||||||||||||||||| |||||||||| ||||||||    
T  8633710 tcaaatttacacaataagaaatt-aaaaacaatcaatgaaaaactcattcagacatttcatcgaacacttg 8633779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 189
Target Start/End: Complemental strand, 6754163 - 6754003
Alignment:
Q  28 tcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatcta 127  Q
    |||||||||||||||| | ||| ||||||||||||| ||||||||||| || ||||||| ||||||||| ||||||||||||||||||| ||||||||||    
T  6754163 tcttaacgttacaccaaggcactgaaccttcaacctttgaggttctccgccattgaattgtgcatgaacatcgatccacccgaccattgcttcaaatcta 6754064  T
Q  128 cacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||||||||||||         ||||| ||||||||||||||||| |||||||||||||||    
T  6754063 cacaataagaaatt-aaaagcaatcaataaaaaactcattcaaacaattcatcaaacacttg 6754003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 11378997 - 11379117
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | || | |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  11378997 tgagacctcttaacgttacaccaaggcatcaaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatccacccggccattgtttc 11379096  T
Q  121 aaatctacacaataagaaatt 141  Q
    ||||||||||||| |||||||    
T  11379097 aaatctacacaattagaaatt 11379117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 34693542 - 34693661
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||| ||| ||||||    
T  34693542 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccacccggcca-tgtttc 34693640  T
Q  121 aaatctacacaataagaaatt 141  Q
    |||||||||||||||||||||    
T  34693641 aaatctacacaataagaaatt 34693661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 43569876 - 43569756
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||| |||||| |||    
T  43569876 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctatgaggttctccgccgttgaattgtgcatgaacgtcgatccacccggccattgattc 43569777  T
Q  121 aaatctacacaataagaaatt 141  Q
    |||| ||||||||||||||||    
T  43569776 aaatttacacaataagaaatt 43569756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 46414587 - 46414707
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| | |||||||| ||||||||| |||||||||||| ||||||||||    
T  46414587 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgctgttgaattgtgcatgaacttcgatccacccggccattgtttc 46414686  T
Q  121 aaatctacacaataagaaatt 141  Q
    ||||||||||||| |||||||    
T  46414687 aaatctacacaattagaaatt 46414707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 51015243 - 51015123
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||  ||||||||||    
T  51015243 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgattcaccccgccattgtttc 51015144  T
Q  121 aaatctacacaataagaaatt 141  Q
    ||||||||||||| |||||||    
T  51015143 aaatctacacaattagaaatt 51015123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 49140307 - 49140425
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||  |||||||||     
T  49140307 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccaccccgccattgtttt 49140406  T
Q  121 aaatctacacaataagaaa 139  Q
    |||||||||||||||||||    
T  49140407 aaatctacacaataagaaa 49140425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 10053524 - 10053644
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||||||||   |||  |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  10053524 tgagacctcttaacgttacaccaatgcactaaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatccacccggccattgtttc 10053623  T
Q  121 aaatctacacaataagaaatt 141  Q
    ||||||||||||| |||||||    
T  10053624 aaatctacacaattagaaatt 10053644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 28 - 140
Target Start/End: Original strand, 36721645 - 36721757
Alignment:
Q  28 tcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatcta 127  Q
    |||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| || ||| |||||||| |    
T  36721645 tcttaacgttacaccaaggcaccgaaccttcaacctctgtggttctccaccgttgaattgtgcatgaacgtcgatccacccggccgttgcttcaaatcca 36721744  T
Q  128 cacaataagaaat 140  Q
    |||||||||||||    
T  36721745 cacaataagaaat 36721757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 21 - 133
Target Start/End: Complemental strand, 44927429 - 44927317
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||| |||| | || |||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||    
T  44927429 tgagacctcttaacgttaaaccaagacatcgaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcaatccacccgaccattgtttc 44927330  T
Q  121 aaatctacacaat 133  Q
    |||||||||||||    
T  44927329 aaatctacacaat 44927317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 21 - 129
Target Start/End: Complemental strand, 49273365 - 49273257
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| ||||||||||    
T  49273365 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgctgttgaattgtgcatgaacgtcgatccacccggccattgtttc 49273266  T
Q  121 aaatctaca 129  Q
    |||||||||    
T  49273265 aaatctaca 49273257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 21 - 188
Target Start/End: Complemental strand, 42383017 - 42382851
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||||| || | ||||||||||||||| ||||||||||| | || ||||||| |||||||||||||||||| ||| |||||| |||    
T  42383017 tgagacctcttaacgttacatcaaggcaccgaaccttcaacatctgaggttctacgcctttgaattctgcatgaacgtcgatccatccggccattgcttc 42382918  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacactt 188  Q
    |||||||||||||||||||||         |||||||||||||||||| ||||||| |||||||||||    
T  42382917 aaatctacacaataagaaatt-taacacaatcaatgaaaaactcattccaacattttatcaaacactt 42382851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 46402969 - 46402851
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||  ||||||||||||||||||||  |||||||||     
T  46402969 tgagacctcttaacgttacaccaaggcaccgaacctttaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccaccccgccattgtttt 46402870  T
Q  121 aaatctacacaataagaaa 139  Q
    |||||||||||||||||||    
T  46402869 aaatctacacaataagaaa 46402851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 54390408 - 54390290
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||   |||||||||||||||||||  |||||||||     
T  54390408 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgcacatgaacgtcgatccaccccgccattgtttt 54390309  T
Q  121 aaatctacacaataagaaa 139  Q
    |||||||||||||||||||    
T  54390308 aaatctacacaataagaaa 54390290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 33449392 - 33449562
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgacc---attgt 117  Q
    |||||| | |||||||||||||| | |||| ||| |||||||||||||||||||| |||||||||| ||| ||||||||||||||| || ||   ||||     
T  33449392 tgagaccttttaacgttacaccaaggcaccaaacgttcaacctctgaggttctccgccgttgaattctgcgtgaacgtcgatccactcggccattattgc 33449491  T
Q  118 ttcaaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||    
T  33449492 ttcaaatctacacaataagaaatt-aaaaataatcaatgaaaaactcattcaaacatttcatcaaacacttg 33449562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 25576844 - 25576964
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||| |||||| || | |||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||| || |||||| |||    
T  25576844 tgagacttcttaatgttacatcaagacaccaaaccttcaacctctgaggttctccgccgttgaattctgcatgaacgtcgatccactcggccattgcttc 25576943  T
Q  121 aaatctacacaataagaaatt 141  Q
    |||||||||||||||||||||    
T  25576944 aaatctacacaataagaaatt 25576964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 21 - 129
Target Start/End: Original strand, 34472329 - 34472437
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||| ||||||||||||||||||||| |||||||||| || ||||||||||||||||||| ||||||||||    
T  34472329 tgagacctcttaacgttacaccaaggcaccgaatcttcaacctctgaggttctccgccgttgaattgtgtatgaacgtcgatccacccggccattgtttc 34472428  T
Q  121 aaatctaca 129  Q
    |||||||||    
T  34472429 aaatctaca 34472437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 21 - 133
Target Start/End: Original strand, 51013531 - 51013643
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| || |||||||  ||||||||||||||||||| | ||||||||||    
T  51013531 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctcccccattgaattgcgcatgaacgtcgatccacctggccattgtttc 51013630  T
Q  121 aaatctacacaat 133  Q
    |||||||||||||    
T  51013631 aaatctacacaat 51013643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 29 - 188
Target Start/End: Complemental strand, 42382229 - 42382071
Alignment:
Q  29 cttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctac 128  Q
    |||||||||||| || | ||||||||||||||| ||||||||||| | || ||||||| |||||||||||||||||| ||| |||||| |||||||||||    
T  42382229 cttaacgttacatcaaggcaccgaaccttcaacatctgaggttctacgcctttgaattctgcatgaacgtcgatccatccggccattgcttcaaatctac 42382130  T
Q  129 acaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacactt 188  Q
    |||||||||||||         |||||||||||||||||| ||||||| |||||||||||    
T  42382129 acaataagaaatt-taacacaatcaatgaaaaactcattccaacattttatcaaacactt 42382071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 34049693 - 34049575
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||| ||||||||| | ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||  || ||||||     
T  34049693 tgagacctcttaatgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccaccccgccgttgtttt 34049594  T
Q  121 aaatctacacaataagaaa 139  Q
    |||||||||||||||||||    
T  34049593 aaatctacacaataagaaa 34049575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 23 - 141
Target Start/End: Original strand, 42328371 - 42328489
Alignment:
Q  23 agacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaa 122  Q
    |||| |||||||||||||||| | || | ||| |||||||||||||||||||| |||||||||| ||||| || ||||||||||||||||||||||||||    
T  42328371 agacctcttaacgttacaccaaggcatcaaacattcaacctctgaggttctccgccgttgaattgtgcattaatgtcgatccacccgaccattgtttcaa 42328470  T
Q  123 atctacacaataagaaatt 141  Q
    ||||||||||| |||||||    
T  42328471 atctacacaattagaaatt 42328489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 14631411 - 14631291
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||||| || | ||| ||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||| ||||| ||||    
T  14631411 tgagacctcttaacgttacaacaaggcactgaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgacccacccggccattttttc 14631312  T
Q  121 aaatctacacaataagaaatt 141  Q
    ||||||| ||||| |||||||    
T  14631311 aaatctatacaattagaaatt 14631291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 30192504 - 30192384
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||  |||||||| | ||||||||||||||||||||||||||||| | |||||||| || |||||| |||||||||||||||||||||||    
T  30192504 tgagacctcttaaaattacaccaaggcaccgaaccttcaacctctgaggttctccgctgttgaattgtgaatgaacatcgatccacccgaccattgtttc 30192405  T
Q  121 aaatctacacaataagaaatt 141  Q
    ||||||| ||||| |||||||    
T  30192404 aaatctatacaattagaaatt 30192384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 30 - 141
Target Start/End: Complemental strand, 41803860 - 41803749
Alignment:
Q  30 ttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctaca 129  Q
    ||||||| |||||| | |||||||| |||||| ||||||||||||| |||||||||| | |||||||||||||| ||||| |||||||||||||||||||    
T  41803860 ttaacgtcacaccaaggcaccgaactttcaacatctgaggttctccgccgttgaattgtacatgaacgtcgatctacccggccattgtttcaaatctaca 41803761  T
Q  130 caataagaaatt 141  Q
    ||||||||||||    
T  41803760 caataagaaatt 41803749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 53826949 - 53827116
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||| | || | ||||||||||||||||| ||||||||||| | |||||| | ||||||||||||||||||  || |||||| |||    
T  53826949 tgagacctcttaacgttaaatcaaggcaccgaaccttcaacctttgaggttctccgctgttgaactctgcatgaacgtcgatccattcggccattgcttc 53827048  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||         ||||||||||||| |||| ||||||| ||||||||||||    
T  53827049 aaatctacacaataagaaatt-aaacacaatcaatgaaaaacttattccaacattttatcaaacacttg 53827116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 23 - 193
Target Start/End: Original strand, 20378142 - 20378311
Alignment:
Q  23 agacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaa 122  Q
    |||| ||||||||| |||| | | |||||||||||||||||||| |||||||| ||||||| || |||||||||||||| | |  || |||||||||||     
T  20378142 agacctcttaacgtgacactaaggcaccgaaccttcaacctctgcggttctccgccgttgagttgtgcatgaacgtcgaacaaatcggccattgtttcag 20378241  T
Q  123 atctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    || ||||||||||||||||         |||| ||||||||||||||||||||| ||||||||||||||||    
T  20378242 atatacacaataagaaatt-aaaaacaatcaacgaaaaactcattcaaacatttaatcaaacacttgatgt 20378311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 39417201 - 39417373
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||||| || | ||||||||||||||||||| ||||||||| |||||||||| | ||||||||| |||||||||| |||||| |||    
T  39417201 tgagacctcttaacgttacatcaaggcaccgaaccttcaacctctaaggttctccgccgttgaattctacatgaacgtggatccacccggccattgcttc 39417300  T
Q  121 a-----aatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |     ||||||||||||||||||||         ||||| |||||||||||| ||||||| ||||||||||||    
T  39417301 aaatctaatctacacaataagaaatt-aaacacaatcaataaaaaactcattccaacattttatcaaacacttg 39417373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 48087805 - 48087977
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||||| || | |||||||||||||||||| ||| |||||| |||||||||| ||||||||||| |||||| ||||| |||| |||    
T  48087805 tgagacctcttaacgttacatcaaggcaccgaaccttcaacctcagagattctccgccgttgaattctgcatgaacgtggatccatccgactattgcttc 48087904  T
Q  121 a-----aatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |     ||||||||||||||||||||         |||||||||||||||||| ||||||| ||||||||||||    
T  48087905 aaatgtaatctacacaataagaaatt-aaacacaatcaatgaaaaactcattccaacattttatcaaacacttg 48087977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 48 - 189
Target Start/End: Complemental strand, 14265347 - 14265207
Alignment:
Q  48 accgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctacacaataagaaattnnnnnn 147  Q
    |||||||||||||||||||||||||||| |||||||||| ||| |||||||||| |    | ||||||| ||||||||||||||||||||||||          
T  14265347 accgaaccttcaacctctgaggttctccgccgttgaattttgcttgaacgtcgaacatatcaaccattgcttcaaatctacacaataagaaatt-aaaaa 14265249  T
Q  148 nnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
       || |||||||||||||||||||||||||||||| |||||    
T  14265248 caatccatgaaaaactcattcaaacatttcatcaaatacttg 14265207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 50 - 183
Target Start/End: Complemental strand, 15636961 - 15636829
Alignment:
Q  50 cgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctacacaataagaaattnnnnnnnn 149  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |     | |||||| |||| |||||||||||||||||||            
T  15636961 cgaaccttcaacctctgaggttctccaccgttgaattatgcttgaacgtcgaacatattggccattgattcatatctacacaataagaaatt-aaaaaca 15636863  T
Q  150 ntcaatgaaaaactcattcaaacatttcatcaaa 183  Q
     |||||||||||||||||||||||||||||||||    
T  15636862 atcaatgaaaaactcattcaaacatttcatcaaa 15636829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 79 - 141
Target Start/End: Original strand, 50458921 - 50458983
Alignment:
Q  79 gttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctacacaataagaaatt 141  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  50458921 gttgaattgtgcatgaacgtcgatccacccgaccattgtttcaaatctacacaattagaaatt 50458983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 55207128 - 55207212
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatcca 105  Q
    |||||| | ||||||| |||| | | ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  55207128 tgagaccttttaacgtcacactaaggcaccgaaccttcaacctatgaggttctccaccgttgaattgtgcatgaacgtcgatcca 55207212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 4095619 - 4095582
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacactt 188  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4095619 tcaatgaaaaactcattcaaacatttcatcaaacactt 4095582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 186
Target Start/End: Complemental strand, 17370638 - 17370603
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacac 186  Q
    ||||||||||||||||||||||||||||||||||||    
T  17370638 tcaatgaaaaactcattcaaacatttcatcaaacac 17370603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 29635304 - 29635343
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttga 190  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  29635304 tcaatgaaaaagtcattcaaacatttcatcaaacacttga 29635343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 1638987 - 1639025
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  1638987 tcaatgaaaaactcattcaaacatttcatcgaacacttg 1639025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 17267681 - 17267719
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  17267681 tcaatgaaaaactcattcaaatatttcatcaaacacttg 17267719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 25156240 - 25156278
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  25156240 tcaatgaaaaaatcattcaaacatttcatcaaacacttg 25156278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 43688216 - 43688178
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  43688216 tcaatgaaaaactcattcaaacatttcattaaacacttg 43688178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 19237121 - 19237089
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaa 183  Q
    |||||||||||||||||||||||||||||||||    
T  19237121 tcaatgaaaaactcattcaaacatttcatcaaa 19237089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 31091977 - 31091945
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaa 183  Q
    |||||||||||| ||||||||||||||||||||    
T  31091977 tcaatgaaaaacacattcaaacatttcatcaaa 31091945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 119; Significance: 5e-61; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 21 - 191
Target Start/End: Original strand, 18147 - 18316
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  18147 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattatgcatgaacatcgatccacccgaccattgtttc 18246  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgat 191  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||    
T  18247 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgat 18316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 5e-58; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 28979275 - 28979447
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||    
T  28979275 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatccacccgacaattgtttc 28979374  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||||||||||||||||||||          || ||||||||||||||||||||||||||||||||||||||||    
T  28979375 aaatctacacaataagaaataaaaaaaaaatcgatgaaaaactcattcaaacatttcatcaaacacttgatgt 28979447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 40588503 - 40588332
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||  |||||||||    
T  40588503 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccaccgttgaattgcgcatgaacgtcgatccacccggtcattgtttc 40588404  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  40588403 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 40588332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 48270602 - 48270431
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| | |||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||    
T  48270602 tgagactttttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccaccgttgaattgtgcatgaaagtcgatccacccggccattgtttc 48270503  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||    
T  48270502 aaatctacacaataagaaattaaaaacaaa-caatgaaaaactcattcaaacatttcatcaaacacttgatgt 48270431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 36394077 - 36394248
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||| |||||||| | |||||||||||||||||||||||||| || |||||||||| |||||||| ||||||||||||||||||||||||    
T  36394077 tgagacctcttaacattacaccaagacaccgaaccttcaacctctgaggttccccgccgttgaattgtgcatgaatgtcgatccacccgaccattgtttc 36394176  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  36394177 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 36394248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 41048744 - 41048573
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||| ||||||||| | ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||    
T  41048744 tgagacctcttaatgttacaccaaggcaccgaaccttcaacctctgaggttctccaccgttaaattgtgcatgaacgtcgatccacccggccattgtttc 41048645  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||| ||||||||||||||||||||||||||||||||||||||    
T  41048644 aaatctacacaataagaaatt-aaaaaaaatcaacgaaaaactcattcaaacatttcatcaaacacttgatgt 41048573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 45363496 - 45363667
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||| ||||    
T  45363496 tgagacctcttaacgttacaccaagacaccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccacccgaccattatttc 45363595  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||| ||||    
T  45363596 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttaatgt 45363667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 34140819 - 34140652
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||| ||||||||| | || |||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||    
T  34140819 tgagacctcttaatgttacaccaaggcatcgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccacccgaccattgtttc 34140720  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||    
T  34140719 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttg 34140652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 21650477 - 21650306
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||| |||| | ||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  21650477 tgagacctcttaacgttataccaaggcaccgaaccttcaacctctaaggttctccgccgttgaattgtgcatgaacgtcgatccacccggccattgtttc 21650378  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    | ||||||||||||||||| |         |||||||||||||||||||||||||||||||||||||||||||    
T  21650377 atatctacacaataagaaa-taaaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 21650306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 46862447 - 46862618
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||| |||||||| | |||||||||||||||||||||| |||||| |||||||||| |||| ||||||||||||| ||| ||||||||||    
T  46862447 tgagacctcttaacattacaccaaggcaccgaaccttcaacctctgagcttctccgccgttgaattgtgcacgaacgtcgatcca-ccgtccattgtttc 46862545  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         ||||||||| |||||||||||||||||||||||||||||||||    
T  46862546 aaatctacacaataagaaattaaaaaaaaatcaatgaaatactcattcaaacatttcatcaaacacttgatgt 46862618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 17839277 - 17839106
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| |  ||||||  ||||||||||||| |||||| ||||||||||  |||||||||||||||||||||||||||||||     
T  17839277 tgagacctcttaacgttacaccaaggtaccgaatattcaacctctgagattctccgccgttgaattgcgcatgaacgtcgatccacccgaccattgtttt 17839178  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  17839177 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 17839106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 28 - 193
Target Start/End: Complemental strand, 13916781 - 13916617
Alignment:
Q  28 tcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatcta 127  Q
    ||||||| |||| ||| | ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  13916781 tcttaacattacgccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatccacccgtccattgttttaaatcta 13916682  T
Q  128 cacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||| |         | |||||||||||||||||||||||||||||||||||||||||    
T  13916681 cacaataagaaact-aaaaacaataaatgaaaaactcattcaaacatttcatcaaacacttgatgt 13916617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 48315433 - 48315600
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| | || |||||||    
T  48315433 tgagacctcttaacgttacaccaagacaccgaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatccaccaggccgttgtttc 48315532  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||| |||||| |||||||||          |||||||||||||||||||||||||||||||||| |||||||    
T  48315533 aaatttacacattaagaaattaaaaa-----caatgaaaaactcattcaaacatttcatcaaacagttgatgt 48315600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 42682910 - 42682739
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||  |||||| | ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |  || || ||||    
T  42682910 tgagacctcttaattttacactaagtcaccgaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatccacacagccgttatttc 42682811  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  42682810 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 42682739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 43351352 - 43351472
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  43351352 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattctgcatgaacgtcgatccacccggccattgtttc 43351451  T
Q  121 aaatctacacaataagaaatt 141  Q
    ||||||||||||| |||||||    
T  43351452 aaatctacacaattagaaatt 43351472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 21615013 - 21615133
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||| ||||||| | |||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||| |||    
T  21615013 tgagacctcttaacgatacaccaaggcaccgaaccttcaacctctgaggttctccgacgttgaattgtgcatgaacgtcgatccacccgaccattgcttc 21615112  T
Q  121 aaatctacacaataagaaatt 141  Q
    |||||||||||||||||||||    
T  21615113 aaatctacacaataagaaatt 21615133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 30360471 - 30360304
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||||| || | || |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||| |||    
T  30360471 tgagacctcttaacgttacatcaaggcatcgaaccttcaacctctgaggttctccactgttgaattctgcatgaacgtcgatccacccggccattgcttc 30360372  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||||| |||||||||||||         |||||||||||||||||| ||||||| ||||||||||||    
T  30360371 aaatctatacaataagaaatt-aaacacaatcaatgaaaaactcattccaacattttatcaaacacttg 30360304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 20564713 - 20564595
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||  |||||||||     
T  20564713 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccaccgttgaattgcgcatgaacgtcgatccaccccgccattgtttt 20564614  T
Q  121 aaatctacacaataagaaa 139  Q
    |||||||||||||||||||    
T  20564613 aaatctacacaataagaaa 20564595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 18237518 - 18237350
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| || |||||||||| || | ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||| |||    
T  18237518 tgagacctcgtaacgttacatcaaggcaccgaaccttcaacctctgaggttctccgccgttgaattctgcatgaacgtcgatccacccggccattgcttc 18237419  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatg-aaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||         |||||| |||||||||||| ||||||| ||||||||||||    
T  18237418 aaatctacacaataagaaatt-taacaaaatcaatgaaaaaactcattccaacattttatcaaacacttg 18237350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 47268865 - 47268697
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||||| || | |||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||| |||||| |||    
T  47268865 tgagacctcttaacgttacatcaaggcaccgaaccttcaacctctgaggttccccgccgttgaattctgcatgaacgtcgatccacccggccattgcttc 47268766  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatg-aaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||         |||||| |||||||||||| ||||||| ||||||||||||    
T  47268765 aaatctacacaataagaaatt-taacacaatcaatgaaaaaactcattccaacattttatcaaacacttg 47268697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 192
Target Start/End: Original strand, 28114653 - 28114816
Alignment:
Q  28 tcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatcta 127  Q
    ||||||||||||||||    || ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||| ||||||||||    
T  28114653 tcttaacgttacaccaaaggactgaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatccacccggccattggttcaaatcta 28114752  T
Q  128 cacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatg 192  Q
    |||||||||||| |         ||||||||||||||||||||| ||||||||||||| ||||||    
T  28114753 cacaataagaaaat-aaaaacaatcaatgaaaaactcattcaaatatttcatcaaacatttgatg 28114816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 31 - 141
Target Start/End: Original strand, 21187559 - 21187669
Alignment:
Q  31 taacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctacac 130  Q
    ||||||||||||| | ||| ||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||| ||||||||||||||||||||    
T  21187559 taacgttacaccaaggcactgaaccttcaacctctgaggttctccgccgttggattgtgcatgaacgtcgatccacccggccattgtttcaaatctacac 21187658  T
Q  131 aataagaaatt 141  Q
    |||||||||||    
T  21187659 aataagaaatt 21187669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 26603458 - 26603625
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||||| || | |||||||||||||||||| |||||||||| |||||||||| ||||||||||| |||||||||  | |||| |||    
T  26603458 tgagacctcttaacgttacatcaaggcaccgaaccttcaacctccgaggttctccgccgttgaattctgcatgaacgttgatccacccagcaattgcttc 26603557  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||         |||||||||||||||||| ||||||| ||||||||||||    
T  26603558 aaatctacacaataagaaatt-aaacacaatcaatgaaaaactcattccaacattttatcaaacacttg 26603625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 48220995 - 48221162
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||||| || |  |||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||| ||| || ||| |||    
T  48220995 tgagacctcttaacgttacatcaaggtaccgaaccttcaacctctgaggttttccgccgttgaattctgcatgaacgtcgatccatccggccgttgcttc 48221094  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||         |||||||||||||||||| ||||||| ||||||||||||    
T  48221095 aaatctacacaataagaaatt-aaacacaatcaatgaaaaactcattccaacattttatcaaacacttg 48221162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 23 - 189
Target Start/End: Complemental strand, 2356241 - 2356076
Alignment:
Q  23 agacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaa 122  Q
    |||| ||||| | |||||||| | || | ||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||| |||||| |||||    
T  2356241 agacctcttagcattacaccaaggcatcaaaccttcaacctctgcggttctccgccgttgaattgtgcatgaacgtcgatccacccggccattgcttcaa 2356142  T
Q  123 atctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||| ||||||||||         ||||||||||||||||||||||||||||||||| |||||    
T  2356141 atctacaccataagaaatt-aaaagcaatcaatgaaaaactcattcaaacatttcatcaaatacttg 2356076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 21 - 133
Target Start/End: Complemental strand, 42735217 - 42735105
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||  | |||| ||||||||||||||||| |||||| |||||||||| |||||||| ||||||||||||| ||||||||||    
T  42735217 tgagacctcttaacgttacaccgaggcaccaaaccttcaacctctgagattctccgccgttgaattgtgcatgaatgtcgatccacccggccattgtttc 42735118  T
Q  121 aaatctacacaat 133  Q
    |||||||||||||    
T  42735117 aaatctacacaat 42735105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 41217568 - 41217396
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||| | || | ||||||||||||||||||||||||||||| || ||||||| ||||||||||| ||||||||||||||||| |||    
T  41217568 tgagacctcttaacgttaaatcaaggcaccgaaccttcaacctctgaggttctccgccattgaattctgcatgaacgtggatccacccgaccattgcttc 41217469  T
Q  121 a-----aatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |     |||||||||||||| |||||         |||||||||||||||||| ||||||| ||||||||||||    
T  41217468 acatctaatctacacaataataaatt-aaacacaatcaatgaaaaactcattccaacattttatcaaacacttg 41217396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 20378956 - 20379066
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||||| || | || ||||||||||||||||| | |||||| ||||||||||   |||||||||||||||||||| |||||| |||    
T  20378956 tgagacctcttaacgttacatcaaggcatcgaaccttcaacctctgggattctccgccgttgaattcaacatgaacgtcgatccacccggccattgcttc 20379055  T
Q  121 aaatctacaca 131  Q
    |||||||||||    
T  20379056 aaatctacaca 20379066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 21 - 186
Target Start/End: Original strand, 1642840 - 1643004
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||| |||| ||| | || ||||||||||| |||||||||||||  |||||||||| |||||||||||||| |    ||  ||||| |||    
T  1642840 tgagacctcttaacattactccaaggcatcgaaccttcaatctctgaggttctctgccgttgaattgtgcatgaacgtcgaacatatcggtcattgcttc 1642939  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacac 186  Q
    |||||||||||||||||||||         ||||||||||||||||||||| ||||||||||||||    
T  1642940 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaatatttcatcaaacac 1643004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 17183166 - 17183082
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatcca 105  Q
    |||||| |||||||||||||||| | || | |||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  17183166 tgagacctcttaacgttacaccaaggcaacaaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatcca 17183082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 10523022 - 10522948
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaa 95  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||  |||||||    
T  10523022 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaa 10522948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 139
Target Start/End: Original strand, 17320299 - 17320376
Alignment:
Q  62 ctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctacacaataagaaa 139  Q
    ||||||| |||||| ||||||||||  | |||||||| |||||||||| ||||||||| |||||||||||||||||||    
T  17320299 ctctgagcttctcccccgttgaattgcgtatgaacgttgatccacccggccattgttttaaatctacacaataagaaa 17320376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 15338158 - 15338235
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgt 98  Q
    |||||| ||||||||| |||||| | |||  |||||||||||||||||||||| | |||||||||| |||||||||||    
T  15338158 tgagacctcttaacgtcacaccaaggcacaaaaccttcaacctctgaggttcttcgccgttgaattgtgcatgaacgt 15338235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 39477495 - 39477571
Alignment:
Q  23 agacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtc 99  Q
    |||| |||||||||||||| | | |||| ||| ||||||||||| |||||||| |||||||||| ||||||||||||    
T  39477495 agacctcttaacgttacactaagccaccaaactttcaacctctgcggttctccgccgttgaattgtgcatgaacgtc 39477571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 149906 - 149868
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||||||||||||||||||||    
T  149906 tcaatgaaaaactcattcaaacatttcatcaaacacttg 149868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 12082749 - 12082711
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12082749 tcaatgaaaaactcattcaaacatttcatcaaacacttg 12082711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 12309979 - 12310017
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12309979 tcaatgaaaaactcattcaaacatttcatcaaacacttg 12310017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 3381062 - 3381099
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacactt 188  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3381062 tcaatgaaaaactcattcaaacatttcatcaaacactt 3381099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 7414390 - 7414427
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacactt 188  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7414390 tcaatgaaaaactcattcaaacatttcatcaaacactt 7414427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 190
Target Start/End: Original strand, 8726471 - 8726639
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| || |||||| |||||| |  |||||| ||||| |||| ||||||||||||||||||||| ||| ||||||| || |    | | ||||| |||    
T  8726471 tgagacctcgtaacgtgacaccaaggtaccgaatcttcatcctccgaggttctccaccgttgaattgtgcttgaacgttgaacatatcaatcattgcttc 8726570  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttga 190  Q
    || |||||||||||| |||||         |||||||||| ||||||||||||||| | |||||||||||    
T  8726571 aattctacacaataataaatt-aaaaacaatcaatgaaaatctcattcaaacatttaagcaaacacttga 8726639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 9367253 - 9367302
Alignment:
Q  90 catgaacgtcgatccacccgaccattgtttcaaatctacacaataagaaa 139  Q
    |||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  9367253 catgaacgtcgatccaccccgccattgttttaaatctacacaataagaaa 9367302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 5282576 - 5282614
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  5282576 tcaatgaaaaactcattcaaacattttatcaaacacttg 5282614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 26926334 - 26926296
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  26926334 tcaatgaaaaactcattcaaatatttcatcaaacacttg 26926296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 7062059 - 7062023
Alignment:
Q  153 aatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||||||||||||||||||||||||| |||||||||    
T  7062059 aatgaaaaactcattcaaacatttcattaaacacttg 7062023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 21187679 - 21187711
Alignment:
Q  161 actcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||||||||||||||    
T  21187679 actcattcaaacatttcatcaaacacttgatgt 21187711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 44110668 - 44110704
Alignment:
Q  153 aatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||||||||||||||||||||| |||||||||||||    
T  44110668 aatgaaaaactcattcaaacattacatcaaacacttg 44110704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 186
Target Start/End: Complemental strand, 11824507 - 11824472
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacac 186  Q
    |||||||||||||||||||||||||| |||||||||    
T  11824507 tcaatgaaaaactcattcaaacattttatcaaacac 11824472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 28066073 - 28066034
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttga 190  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  28066073 tcaatgaaaaacccattcaaacatttaatcaaacacttga 28066034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 189
Target Start/End: Complemental strand, 7066544 - 7066514
Alignment:
Q  159 aaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||||||||||||    
T  7066544 aaactcattcaaacatttcatcaaacacttg 7066514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 22890772 - 22890734
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  22890772 tcaatgaaaaactcattcaagcatttcatcaaacgcttg 22890734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 190
Target Start/End: Complemental strand, 3924634 - 3924601
Alignment:
Q  157 aaaaactcattcaaacatttcatcaaacacttga 190  Q
    |||||||||||| |||||||||||||||||||||    
T  3924634 aaaaactcattctaacatttcatcaaacacttga 3924601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 16781473 - 16781436
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacactt 188  Q
    ||||||| |||||||||||| |||||||||||||||||    
T  16781473 tcaatgataaactcattcaagcatttcatcaaacactt 16781436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 41935744 - 41935776
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaa 183  Q
    ||||||||||||||||||||| |||||||||||    
T  41935744 tcaatgaaaaactcattcaaatatttcatcaaa 41935776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 2e-57; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 3601292 - 3601121
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | |||| |||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  3601292 tgagacctcttaacgttacaccaaggcaccaaaccttgaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatccacccgaccattgtttc 3601193  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  3601192 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 3601121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 25498345 - 25498174
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||| |||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25498345 tgagacctcttaacattacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 25498246  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         | ||||||||| |||||||||||||||||||||||||||||||    
T  25498245 aaatctacacaataagaaatt-aaaaacaataaatgaaaaattcattcaaacatttcatcaaacacttgatgt 25498174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 1400558 - 1400729
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| || ||||||| |||||||| ||||||||||||| ||||||||||    
T  1400558 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccattgaattgtgcatgaatgtcgatccacccggccattgtttc 1400657  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  1400658 aaatctacacaataagaaatt-aaaaaaaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 1400729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 11346660 - 11346489
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||| |||||||||     
T  11346660 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccacccggccattgtttt 11346561  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||| ||||||||||||||||||||||||||||    
T  11346560 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactccttcaaacatttcatcaaacacttgatgt 11346489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 21 - 187
Target Start/End: Complemental strand, 33370605 - 33370440
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | |||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||    
T  33370605 tgagacctcttaacgttacaccaaggcaccgaacattcaacctctgaggttctctaccgttgaattgtgcatgaacgtcgatccacccgaccattgcttc 33370506  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacact 187  Q
    ||||||||||||||| |||||         |||||||||||||||||||||||||||||||||||||    
T  33370505 aaatctacacaataaaaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacact 33370440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 35565223 - 35565052
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||   ||||||||| ||||||||||||||| ||| || ||||||||||    
T  35565223 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctcggtcgttgaattgtgcatgaacgtcgattcactcggccattgtttc 35565124  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  35565123 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 35565052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 35927693 - 35927863
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | |||||||  |||||||||||||||||||| |||||||||| |||||||| ||||||||||||| ||||||||||    
T  35927693 tgagacctcttaacgttacaccaaggcaccgaaatttcaacctctgaggttctccgccgttgaattgtgcatgaa-gtcgatccacccggccattgtttc 35927791  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  35927792 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 35927863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 21 - 185
Target Start/End: Original strand, 17366991 - 17367154
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | |||||||||||||||||| |||||||||| |||||||||| ||||||||| |||||||||||||||||||||||    
T  17366991 tgagacctcttaacgttacaccaagacaccgaaccttcaacctcagaggttctccgccgttgaattgtgcatgaacttcgatccacccgaccattgtttc 17367090  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaaca 185  Q
    |||||||||||||||||||||         ||||| ||||||||||||||||||||||| |||||    
T  17367091 aaatctacacaataagaaatt-aaaaataatcaataaaaaactcattcaaacatttcattaaaca 17367154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 18308211 - 18308040
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||| |||||||||||||||||||||||||  ||||||||| |||||||| || ||||||| |||||||||||||    
T  18308211 tgagacttcttaacgttacaccaaggcactgaaccttcaacctctgaggttctccgtcgttgaattgtgcatgaatgttgatccactcgaccattgtttc 18308112  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         ||||||||||| |||||||||||||||||||||||||||||||    
T  18308111 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaaatcattcaaacatttcatcaaacacttgatgt 18308040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 27661633 - 27661804
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||| |||||||||     
T  27661633 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccacccggccattgtttt 27661732  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||||||||||||||||||| |         |||||||||||||| ||||||||||||||||||||| ||||||    
T  27661733 aaatctacacaataagaaact-aaaaacaatcaatgaaaaactctttcaaacatttcatcaaacacatgatgt 27661804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 8576397 - 8576568
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||| |||||||||     
T  8576397 tgagacctcttaacgttacaccaaagcaccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccacccggccattgtttt 8576496  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||||||||||||||||||| |         ||||||||||||| |||||||||||||||| ||||||||||||    
T  8576497 aaatctacacaataagaaact-aaaaacaatcaatgaaaaactaattcaaacatttcatcgaacacttgatgt 8576568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 30709549 - 30709378
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||| | |||||||||     
T  30709549 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccacctggccattgtttt 30709450  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||||||||||||||||||| |         ||||| |||||||||||||||||||||||| ||||||||||||    
T  30709449 aaatctacacaataagaaact-aaaaacaatcaatcaaaaactcattcaaacatttcatcgaacacttgatgt 30709378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 28 - 193
Target Start/End: Original strand, 7492 - 7652
Alignment:
Q  28 tcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatcta 127  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||  |||||||| |||||||    
T  7492 tcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccacccggacattgttttaaatcta 7591  T
Q  128 cacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||| |          |||||||||||||||||||| |||||||||||||||||||||    
T  7592 cacaataagaaactaaaaa-----caatgaaaaactcattcaaatatttcatcaaacacttgatgt 7652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 28 - 193
Target Start/End: Original strand, 42864915 - 42865079
Alignment:
Q  28 tcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatcta 127  Q
    ||||||||| ||||||  |||| |||||||||| |||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||| |||||||    
T  42864915 tcttaacgtcacaccaaatcactgaaccttcaaactctgaggttctccgccgttgaattgtgcatgaacgtcgatctacccgaccattgttttaaatcta 42865014  T
Q  128 cacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||||||||||||||         |||||||||||||||||||||||||| ||||||||||| ||||    
T  42865015 cacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacattttatcaaacacttaatgt 42865079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 4724330 - 4724450
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| ||||||||||    
T  4724330 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgattcacccggccattgtttc 4724429  T
Q  121 aaatctacacaataagaaatt 141  Q
    ||||||||||||| |||||||    
T  4724430 aaatctacacaattagaaatt 4724450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 38854109 - 38853938
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||| ||| |||||||||     
T  38854109 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccatccggccattgtttt 38854010  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
     |||||||||||||||||| |         ||||| |||||||||||||||||||||||| ||||||||||||    
T  38854009 taatctacacaataagaaact-aaaaacaatcaatcaaaaactcattcaaacatttcatcgaacacttgatgt 38853938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 40009479 - 40009312
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||||| || | ||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||  |||||| |||    
T  40009479 tgagacctcttaacgttacatcaagacaccgaaccttcaacctttgaggttctccgccgttgaattctgcatgaacgtcgatccacccagccattgcttc 40009380  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||         |||||||||||||||||| ||||||| ||||||||||||    
T  40009379 aaatctacacaataagaaatt-aaacacaatcaatgaaaaactcattccaacattttatcaaacacttg 40009312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 541891 - 542066
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgacc----attg 116  Q
    |||||| |||||||||||||||| | || |||||||||||||||||||||||||| ||||||||||  ||||||||||||||| ||||||||    ||||    
T  541891 tgagacctcttaacgttacaccaaggcatcgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatctacccgaccatatattg 541990  T
Q  117 tttcaaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||||||||||||| |||||||||||         ||||||||||||| |||||||||||||||||||||||||||||    
T  541991 tttcaaatctacagaataagaaatt-aaaaacaatcaatgaaaaactaattcaaacatttcatcaaacacttgatgt 542066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 8537905 - 8537730
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggt----tctccaccgttgaattatgcatgaacgtcgatccacccgaccattg 116  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||    |||||  |||||||||  ||||||||||||||||||||||||||||    
T  8537905 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggtaggttctccttcgttgaattgcgcatgaacgtcgatccacccgaccattg 8537806  T
Q  117 tttcaaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||| ||||||| ||||||||| |||         |||||||||||||||||||||||||||||||||||||||||||    
T  8537805 ttttaaatctagacaataagagatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 8537730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 28880942 - 28880824
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||| |||||||||     
T  28880942 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccacccggccattgtttt 28880843  T
Q  121 aaatctacacaataagaaa 139  Q
    |||||||||||||||||||    
T  28880842 aaatctacacaataagaaa 28880824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 19400314 - 19400147
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||| ||||||||| || | ||||||||||||||||||||||||||| | |||||||||| |||||||| |||||||||||||||||||| |||    
T  19400314 tgagacctctcaacgttacatcaaggcaccgaaccttcaacctctgaggttcttcgccgttgaattctgcatgaatgtcgatccacccgaccattgcttc 19400215  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||         | |||||||||||||||| ||||||| ||||||||||||    
T  19400214 aaatctacacaataagaaattaaacacaatt-aatgaaaaactcattccaacattttatcaaacacttg 19400147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 3458787 - 3458620
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||||| || | | ||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||| |||||| |||    
T  3458787 tgagacctcttaacgttacatcaaggcgccgaaccttcaacctctgaggttctccgccgttgaattctgcatgaacgtcgacccacccggccattgcttc 3458688  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||||||||||||||||| |         |||||||||||||||||| ||||||| ||||||||||||    
T  3458687 aaatctacacaataagaaact-aaacacaatcaatgaaaaactcattccaacattttatcaaacacttg 3458620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 11027728 - 11027557
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||| ||| |||||||||     
T  11027728 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccatccggccattgtttt 11027629  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
     |||||||||||||||||| |         | ||| |||||||||||||||||||||||| ||||||||||||    
T  11027628 taatctacacaataagaaact-aaaaacaatgaatcaaaaactcattcaaacatttcatcgaacacttgatgt 11027557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 19036930 - 19037048
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||  |||||||||     
T  19036930 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccaccccgccattgtttt 19037029  T
Q  121 aaatctacacaataagaaa 139  Q
    |||||||||||||||||||    
T  19037030 aaatctacacaataagaaa 19037048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 1971316 - 1971196
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||| |||| | || | |||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||| |||    
T  1971316 tgagacctcttaacgttataccaaggcatcaaaccttcaacctctgaggttctccgccattgaattgtgcatgaacgtcgatccacccgaccattgcttc 1971217  T
Q  121 aaatctacacaataagaaatt 141  Q
    |||||||||||||||||||||    
T  1971216 aaatctacacaataagaaatt 1971196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 6793642 - 6793762
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||| ||||||||||||| ||||| |||| ||||||||||||||||||||||| |||||||||    
T  6793642 tgagacctcttaacgttacaccaaggcaccgaaccttcaacttctgaggttctccgccgttaaattgtgcatgaacgtcgatccacccgatcattgtttc 6793741  T
Q  121 aaatctacacaataagaaatt 141  Q
    ||||||||||| | |||||||    
T  6793742 aaatctacacagttagaaatt 6793762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 28 - 176
Target Start/End: Complemental strand, 1691189 - 1691042
Alignment:
Q  28 tcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatcta 127  Q
    ||||||| |||||||| | ||| ||||||||||||||||||||||||  |||||||||| |||| ||||||||||||||||| |||||||||||||||||    
T  1691189 tcttaactttacaccaaggcactgaaccttcaacctctgaggttctctgccgttgaattgtgcacgaacgtcgatccacccggccattgtttcaaatcta 1691090  T
Q  128 cacaa-taagaaattnnnnnnnnntcaatgaaaaactcattcaaacattt 176  Q
    ||||| |||||||||         ||||||||||||||||||||||||||    
T  1691089 cacaattaagaaatt--aaaataatcaatgaaaaactcattcaaacattt 1691042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 28 - 190
Target Start/End: Complemental strand, 12805477 - 12805317
Alignment:
Q  28 tcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatcta 127  Q
    ||||||||| |||||| |   ||||||||||||||| ||||||||||||| |||||||| |||||||||||||| |    ||||||||| ||||||||||    
T  12805477 tcttaacgtgacaccaaggtgccgaaccttcaacctttgaggttctccactgttgaattgtgcatgaacgtcgaacatatcgaccattgcttcaaatcta 12805378  T
Q  128 cacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttga 190  Q
    ||||| ||||||||         ||||||||||||||||||||||||||||| ||||||||||    
T  12805377 cacaa-aagaaatt-acaaataatcaatgaaaaactcattcaaacatttcattaaacacttga 12805317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 23 - 189
Target Start/End: Complemental strand, 7082241 - 7082076
Alignment:
Q  23 agacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaa 122  Q
    |||| |||||||||||  ||| | |||||||| ||||||||||  | |||||   ||||||||| |||||||| ||||||||| ||| |||||| |||||    
T  7082241 agacctcttaacgttaagccaaggcaccgaactttcaacctctacgcttctctgtcgttgaattgtgcatgaaagtcgatccatccggccattgcttcaa 7082142  T
Q  123 atctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||| ||||||||||         ||||||||||||||||||||||| |||||||||||||||    
T  7082141 atctacactataagaaatt-aaaaacaatcaatgaaaaactcattcaaacaattcatcaaacacttg 7082076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 28 - 190
Target Start/End: Complemental strand, 12742659 - 12742499
Alignment:
Q  28 tcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatcta 127  Q
    ||||||||| |||||| |   ||||||||||||||| ||||||||||||| |||||||| |||||||||||||| |    || |||||| ||||||||||    
T  12742659 tcttaacgtgacaccaaggtgccgaaccttcaacctttgaggttctccactgttgaattgtgcatgaacgtcgaacatatcggccattgcttcaaatcta 12742560  T
Q  128 cacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttga 190  Q
    ||||| ||||| ||         ||||||||||||||||||||||||||||| ||||||||||    
T  12742559 cacaa-aagaactt-acaaataatcaatgaaaaactcattcaaacatttcattaaacacttga 12742499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 52 - 185
Target Start/End: Complemental strand, 2599139 - 2599007
Alignment:
Q  52 aaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctacacaataagaaattnnnnnnnnnt 151  Q
    |||||| |||||||||||||||||||||||||| | ||| |||||||||| |    |  |||||| ||||||||||||||||||||||||         |    
T  2599139 aacctttaacctctgaggttctccaccgttgaactgtgcttgaacgtcgaacatatcagccattgcttcaaatctacacaataagaaattaaaaacaa-t 2599041  T
Q  152 caatgaaaaactcattcaaacatttcatcaaaca 185  Q
    ||||||||||||||||||||||||||||||||||    
T  2599040 caatgaaaaactcattcaaacatttcatcaaaca 2599007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 62 - 193
Target Start/End: Complemental strand, 22283677 - 22283547
Alignment:
Q  62 ctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctacacaataagaaattnnnnnnnnntcaatgaaaaa 161  Q
    ||||||| |||||| ||||||||||  | |||||||| |||||||||| ||||||||| |||||||||||||||||||           ||||| |||||    
T  22283677 ctctgagcttctcccccgttgaattgcgtatgaacgttgatccacccggccattgttttaaatctacacaataagaaa-caaaaaacaatcaataaaaaa 22283579  T
Q  162 ctcattcaaacatttcatcaaacacttgatgt 193  Q
    || ||||||||||||| |||||||||||||||    
T  22283578 cttattcaaacatttcgtcaaacacttgatgt 22283547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 36350568 - 36350673
Alignment:
Q  28 tcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatcta 127  Q
    |||||||||||||||| | |||| ||||||||||||||||||||||   ||||        |||||||| |||||||||||| |||||||||||||||||    
T  36350568 tcttaacgttacaccaaggcaccaaaccttcaacctctgaggttctttgccgt--------gcatgaacatcgatccacccggccattgtttcaaatcta 36350659  T
Q  128 cacaataagaaatt 141  Q
    |||||| |||||||    
T  36350660 cacaattagaaatt 36350673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 15798473 - 15798511
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15798473 tcaatgaaaaactcattcaaacatttcatcaaacacttg 15798511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 16418477 - 16418515
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16418477 tcaatgaaaaactcattcaaacatttcatcaaacacttg 16418515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 28717900 - 28717862
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  28717900 tcaatgaaaaactcattcaaacatttcatctaacacttg 28717862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 151 - 185
Target Start/End: Complemental strand, 34595149 - 34595115
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaaca 185  Q
    |||||||||||||||||||||||||||||||||||    
T  34595149 tcaatgaaaaactcattcaaacatttcatcaaaca 34595115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 36312337 - 36312375
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  36312337 tcaatgaaaaactaattcaaacatttcatcaaacacttg 36312375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 13131467 - 13131505
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  13131467 tcaatgaaaaactcattcaaatatttcttcaaacacttg 13131505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 185
Target Start/End: Complemental strand, 18920544 - 18920510
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaaca 185  Q
    ||||||||||| |||||||||||||||||||||||    
T  18920544 tcaatgaaaaattcattcaaacatttcatcaaaca 18920510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 185
Target Start/End: Complemental strand, 37396530 - 37396496
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaaca 185  Q
    |||||||| ||||||||||||||||||||||||||    
T  37396530 tcaatgaacaactcattcaaacatttcatcaaaca 37396496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 2e-57; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 34153543 - 34153714
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||    
T  34153543 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgtgcattaacgtcgatccacccgaccattgtttc 34153642  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||||||||| ||||||||||||||||||||||    
T  34153643 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaatcatttcatcaaacacttgatgt 34153714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 1042703 - 1042532
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||  ||||||| ||||||||||||||||||| ||||    
T  1042703 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaatgtcgatccacccgaccattatttc 1042604  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  1042603 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 1042532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 21 - 191
Target Start/End: Original strand, 44560435 - 44560604
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||| |||||||| |  |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  44560435 tgagacctcttaacattacaccaaggtaccgaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatccacccgaccattgtttc 44560534  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgat 191  Q
    |||||| ||||||||||||||         |||||||||||||||||||||||||||||||||||||||||    
T  44560535 aaatctgcacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgat 44560604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 11288247 - 11288075
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | |||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||    
T  11288247 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgtcgttgaattgtgcatgaacgtcgatccacccgaccattgtttc 11288148  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatc-aaacacttgatgt 193  Q
    |||||||||||||||||||||         ||||||||||||||||||||||||||| || |||||||||||||    
T  11288147 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcgtcaaaacacttgatgt 11288075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 49424013 - 49424185
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||| ||||||||||    
T  49424013 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgtgcatgtacgtcgatccacccggccattgtttc 49424112  T
Q  121 -aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
     |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  49424113 aaaatctacacaataagaaatt-aaaaaaaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 49424185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 242671 - 242842
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||    
T  242671 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatccacctgaccattgtttc 242770  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
     |||||||||| |||||||||         ||||| |||||||||||||||||||||||||||||||||||||    
T  242771 caatctacacagtaagaaatt-aaaaacaatcaataaaaaactcattcaaacatttcatcaaacacttgatgt 242842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 1226112 - 1225945
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||||| || | |||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||    
T  1226112 tgagacttcttaacgttacatcaaggcaccaaaccttcaacctctgaggttctccgccgttgaattctgcatgaacgtcgatccacccgaccattgcttc 1226013  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||    
T  1226012 aaatctacacaataagaaatt-aaacacaatcaatgaaaaactcattcaaacatttcatcaaacacttg 1225945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 9489631 - 9489460
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||| |||||||| | |||||||||||||||||||||||||||||  |||||||||  ||||||||||||||||||||||||||||||||    
T  9489631 tgagacctcttaacattacaccaaggcaccgaaccttcaacctctgaggttctccgtcgttgaattgcgcatgaacgtcgatccacccgaccattgtttc 9489532  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||||||||| |||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  9489531 aaatctacataataagaaatt-taaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 9489460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 957710 - 957881
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||| |||||||| | |||| |||||| ||||||||||||||||| |||||||||| |||||||| ||||||||||||| ||||||||||    
T  957710 tgagacctcttaacattacaccaaggcaccaaacctttaacctctgaggttctccgccgttgaattttgcatgaatgtcgatccacccggccattgtttc 957809  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  957810 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 957881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 21017432 - 21017603
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||| |||||||||     
T  21017432 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccacccggccattgtttt 21017531  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||||||||||||||||||| |         |||||||||||||||||||||||||||||| ||||||||||||    
T  21017532 aaatctacacaataagaaact-aaaaacaatcaatgaaaaactcattcaaacatttcatcgaacacttgatgt 21017603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 37866358 - 37866187
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||| ||||||||||||| |||||||||| |||||||||||| ||||||||  ||||||||||    
T  37866358 tgagacctcttaacgttacaccaagccaccgaaccttcaacatctgaggttctccgccgttgaattgtgcatgaacgtctatccaccccgccattgtttc 37866259  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         || |||||||||||||||||||||||||||||| |||||||||    
T  37866258 aaatctacacaataagaaattaaaaaaaattcgatgaaaaactcattcaaacatttcatcaaa-acttgatgt 37866187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 21 - 185
Target Start/End: Complemental strand, 39588881 - 39588718
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||| |||| | || |||||||||||||||||||||||||| ||||||||||  ||||||||||||||||| ||||||||||||||    
T  39588881 tgagacctcttaacgttataccaaggcatcgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccatccgaccattgtttc 39588782  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaaca 185  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||    
T  39588781 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaaca 39588718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 21 - 188
Target Start/End: Complemental strand, 42886215 - 42886049
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||||||||   ||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||| ||||||||||    
T  42886215 tgagacctcttaacgttacaccaaagcaccgaaccttcaacctctgaggttctcagccgttgaattgtgcatgaacgtcgatccacccggccattgtttc 42886116  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacactt 188  Q
    |||||||||||||||||||||         ||||||||||| ||||||||||||||||||||| ||||    
T  42886115 aaatctacacaataagaaatt-aaaaataatcaatgaaaaattcattcaaacatttcatcaaaaactt 42886049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 28 - 189
Target Start/End: Complemental strand, 24606697 - 24606537
Alignment:
Q  28 tcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatcta 127  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||  ||||||||| ||||||||||| |||||||||||| |||| |||||||||     
T  24606697 tcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgtcgttgaattgtgcatgaacgttgatccacccgactattgcttcaaatctg 24606598  T
Q  128 cacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||||||||||||         |||||||||||||||||||||||||||||||||||||||    
T  24606597 cacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttg 24606537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 20779124 - 20779291
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||| ||||||||||||||||| ||||||  |||||||||| |||||||||||||||||||||| |||||| |||    
T  20779124 tgagacctcttaacgttacaccaagacactgaaccttcaacctctgaagttctcagccgttgaattgtgcatgaacgtcgatccacccggccattgcttc 20779223  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||         ||||||||||||||||||||||| |||||||||||||||    
T  20779224 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacagttcatcaaacacttg 20779291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 28082190 - 28082019
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | |||| |||||||||||||||||||||||| ||||||||||  ||||||||||||||||| ||   ||||||||     
T  28082190 tgagacctcttaacgttacaccaaggcaccaaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccaaccagacattgttta 28082091  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  28082090 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 28082019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 55794560 - 55794389
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | |||||||||||||||||||||||||||||  |||||||||  ||||||||||||||||||||| |||||||||     
T  55794560 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgtcgttgaattgcgcatgaacgtcgatccacccggccattgtttt 55794461  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||||||||||||||||||| |         ||||| |||||||||||||||||||||||| ||||||||||||    
T  55794460 aaatctacacaataagaaact-aaaaacaatcaatcaaaaactcattcaaacatttcatcgaacacttgatgt 55794389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 23 - 189
Target Start/End: Original strand, 14330951 - 14331116
Alignment:
Q  23 agacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaa 122  Q
    |||| |||||||||||||||| | ||||||||| |||||||||| ||||||||||| ||||||| ||||||||| ||||||||||||||||||| |||||    
T  14330951 agacctcttaacgttacaccaaggcaccgaaccatcaacctctgcggttctccaccattgaattgtgcatgaacatcgatccacccgaccattgcttcaa 14331050  T
Q  123 atctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||| ||||||         ||||||||||||||||||||||| |||||||||||||||    
T  14331051 atctacacaatatgaaatt-aaaaacaatcaatgaaaaactcattcaaacaattcatcaaacacttg 14331116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 21 - 133
Target Start/End: Complemental strand, 21169403 - 21169291
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  21169403 tgagacctcttaacattacaccaaggcaccgaaccttcaacctctgaggttctccaccgttgaattgtgcatgaacgtcgatccacccggccattgtttc 21169304  T
Q  121 aaatctacacaat 133  Q
    |||||||||||||    
T  21169303 aaatctacacaat 21169291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 32938157 - 32938324
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | |||||||||||||||||||||||||||||  ||||||||| ||||||||| |||||||||||| |||||  |||    
T  32938157 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgtcgttgaattgtgcatgaacatcgatccacccggccatttcttc 32938256  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||  ||||||||||         |||||||||||||||||||||||||||||||||||||||    
T  32938257 aaatctacatcataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttg 32938324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 33163799 - 33163966
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||||| || | ||||||||||||||| ||||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||    
T  33163799 tgagacctcttaacgttacatcaaggcaccgaaccttcaacgtctgaggttcttcgctgttgaattctgcatgaacgtcgatccacccgaccattgcttc 33163898  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||         |||||||||||||||||| ||||||| ||||||||||||    
T  33163899 aaatctacacaataagaaatt-taacacaatcaatgaaaaactcattccaacattttatcaaacacttg 33163966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 49792191 - 49792311
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| || ||||||||||    
T  49792191 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatccactcggccattgtttc 49792290  T
Q  121 aaatctacacaataagaaatt 141  Q
    ||||||||||||| |||||||    
T  49792291 aaatctacacaattagaaatt 49792311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 4785677 - 4785796
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||| |||||| || | ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||    
T  4785677 tgagacctcttaaggttacatcaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatccacctgaccattgtttc 4785776  T
Q  121 aaatctacacaataagaaat 140  Q
    ||||||||||||||||||||    
T  4785777 aaatctacacaataagaaat 4785796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 28 - 186
Target Start/End: Original strand, 34530058 - 34530215
Alignment:
Q  28 tcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatcta 127  Q
    |||||||||||||||| | || |||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||  |||||||||||||||||    
T  34530058 tcttaacgttacaccaaggcatcgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccacccagccattgtttcaaatcta 34530157  T
Q  128 cacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacac 186  Q
    | ||||||||||||         ||||| ||||||||||||||||||||||||||||||    
T  34530158 cgcaataagaaatt-aaaaacaatcaattaaaaactcattcaaacatttcatcaaacac 34530215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 2772954 - 2772841
Alignment:
Q  28 tcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatcta 127  Q
    |||||||||||||||| | ||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  2772954 tcttaacgttacaccaaggcaccgaaccttcaacctctaaggttctccgccgttgaattgtgcatgaacgtcgatccacccgactattgtttcaaatcta 2772855  T
Q  128 cacaataagaaatt 141  Q
    |||||| |||||||    
T  2772854 cacaattagaaatt 2772841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 21 - 190
Target Start/End: Complemental strand, 3393256 - 3393088
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |    ||||||||| |||    
T  3393256 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgaacatatcgaccattgcttc 3393157  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttga 190  Q
    | |||||||||||||||||||         |||||||||| |||||||||||||||||||||||||||||    
T  3393156 acatctacacaataagaaatt-aaaaacaatcaatgaaaagctcattcaaacatttcatcaaacacttga 3393088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 13181551 - 13181722
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||| ||| |||||||||     
T  13181551 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccatccggccattgtttt 13181650  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
     |||||||||||||||||| |         | ||| ||||||||||| |||||||||||||||||||||||||    
T  13181651 taatctacacaataagaaact-aaaaacaatgaatcaaaaactcattaaaacatttcatcaaacacttgatgt 13181722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 40354028 - 40354199
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | |||| |||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||| ||||| |||     
T  40354028 tgagacctcttaacgttacaccaaggcaccaaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccacccggccattctttt 40354127  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||||||||||||||||||| |         |||||||||||||||||||||||||||||  | ||||||||||    
T  40354128 aaatctacacaataagaaact-aaaaacaatcaatgaaaaactcattcaaacatttcatggagcacttgatgt 40354199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 30 - 189
Target Start/End: Complemental strand, 49063923 - 49063765
Alignment:
Q  30 ttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctaca 129  Q
    |||||||||||||| | |||||||||||||||||||| |||||||| |||||||||| |||||||| ||||||| ||||| |||||| ||||||||||||    
T  49063923 ttaacgttacaccaaggcaccgaaccttcaacctctgtggttctccgccgttgaattgtgcatgaatgtcgatctacccggccattgcttcaaatctaca 49063824  T
Q  130 caataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||||||||||          |||||||||||||||||||||| |||||||||||||||    
T  49063823 caataagaaattaaaaacaac-caatgaaaaactcattcaaacaattcatcaaacacttg 49063765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 51428447 - 51428617
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | |||| |||||||||||| ||||||||| | || ||||||| |||||||||| |||||||| |||||||||||||    
T  51428447 tgagacctcttaacgttacaccaaggcaccaaaccttcaacctttgaggttctacgccattgaattgtgcatgaacgccgatccactcgaccattgtttc 51428546  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||||||||||||||| |||||         |||||| ||||||||||||||||||||||||||||||||||||    
T  51428547 aaatctacacaataaaaaatt-aaaaacaatcaatg-aaaactcattcaaacatttcatcaaacacttgatgt 51428617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 6177570 - 6177688
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||  |||||||||     
T  6177570 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccaccccgccattgtttt 6177669  T
Q  121 aaatctacacaataagaaa 139  Q
    |||||||||||||||||||    
T  6177670 aaatctacacaataagaaa 6177688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 23 - 189
Target Start/End: Complemental strand, 21711510 - 21711345
Alignment:
Q  23 agacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaa 122  Q
    |||| |||||||||||||||| | |||||||| ||||||||||| |||||||| |||||||||| ||||| ||| |||||||||| | |||||| |||||    
T  21711510 agacctcttaacgttacaccaaggcaccgaactttcaacctctgcggttctccgccgttgaattgtgcataaacatcgatccaccaggccattgcttcaa 21711411  T
Q  123 atctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||         ||||||||||||||||||||||| |||||||||||||||    
T  21711410 atctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacaattcatcaaacacttg 21711345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 41794817 - 41794935
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||  |||||||||     
T  41794817 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccaccccgccattgtttt 41794916  T
Q  121 aaatctacacaataagaaa 139  Q
    |||||||||||||||||||    
T  41794917 aaatctacacaataagaaa 41794935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 56138862 - 56138744
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||  |||||||||     
T  56138862 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccaccccgccattgtttt 56138763  T
Q  121 aaatctacacaataagaaa 139  Q
    |||||||||||||||||||    
T  56138762 aaatctacacaataagaaa 56138744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 21 - 190
Target Start/End: Complemental strand, 17211218 - 17211050
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | |||  ||||||||||||||||||||||   | |||||||| |||||||| |||||||||||||||||||| |||    
T  17211218 tgagacctcttaacgttacaccaagacacataaccttcaacctctgaggttctatgcggttgaattgtgcatgaaggtcgatccacccgaccattgcttc 17211119  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttga 190  Q
    ||||||||||| |||||||||         |||||||||||||||| |||||||||||||||||||||||    
T  17211118 aaatctacacagtaagaaatt-aaaaacaatcaatgaaaaactcatacaaacatttcatcaaacacttga 17211050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 36776781 - 36776894
Alignment:
Q  28 tcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatcta 127  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||  | ||||||| |||||||||||||||||||||| |||||||||||||||||    
T  36776781 tcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgtcattgaattgtgcatgaacgtcgatccacccggccattgtttcaaatcta 36776880  T
Q  128 cacaataagaaatt 141  Q
    |||||| |||||||    
T  36776881 cacaattagaaatt 36776894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 20901923 - 20902043
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | || ||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||| | |||||| |||    
T  20901923 tgagacctcttaacgttacaccaaggcatcgaaccttcaacctctgaggttctccgtcgttgaattgtgcatgaacgtcgatccacctggccattgcttc 20902022  T
Q  121 aaatctacacaataagaaatt 141  Q
    |||||||||||||||||||||    
T  20902023 aaatctacacaataagaaatt 20902043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 21 - 129
Target Start/End: Original strand, 26591940 - 26592048
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| |  |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  26591940 tgagacctcttaacgttacaccaaggtaccgaatcttcaacctctgaggttctccgccgttgaattatgcatgaacgtcgatccacccggccattgtttc 26592039  T
Q  121 aaatctaca 129  Q
    |||||||||    
T  26592040 aaatctaca 26592048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 49817899 - 49818019
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    ||||||||||||| ||||||||| | |||| |||||||||||||| ||||||||  |||||||||  |||||||||||||||||||||||||||||||||    
T  49817899 tgagacatcttaatgttacaccaaggcaccaaaccttcaacctctaaggttctctgccgttgaatcgtgcatgaacgtcgatccacccgaccattgtttc 49817998  T
Q  121 aaatctacacaataagaaatt 141  Q
    ||||||||| |||||||||||    
T  49817999 aaatctacataataagaaatt 49818019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 28 - 187
Target Start/End: Original strand, 31824891 - 31825049
Alignment:
Q  28 tcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatcta 127  Q
    ||||||| ||||| || | |||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||| | |||||| ||||||||||    
T  31824891 tcttaactttacatcaaggcaccgaaccttcaacctccgaggttctccgccgttgaattctgcatgaacgtcgatccacctggccattgcttcaaatcta 31824990  T
Q  128 cacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacact 187  Q
    ||||||||||||||         |||||||||||||||||| ||||||| ||||||||||    
T  31824991 cacaataagaaatt-taacacaatcaatgaaaaactcattccaacattttatcaaacact 31825049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 25762548 - 25762430
Alignment:
Q  23 agacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaa 122  Q
    |||| ||||||||||||||||   || |||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||    
T  25762548 agacctcttaacgttacaccaaaacatcgaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgttgatccacccgaccattgtttcaa 25762449  T
Q  123 atctacacaataagaaatt 141  Q
    ||||||| ||| |||||||    
T  25762448 atctacataattagaaatt 25762430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 43889754 - 43889874
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||  | |||| |||||| |||||| |||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  43889754 tgagacctcttaacgttacacccaggcaccaaacctttaacctccgaggttctccgccgttgaattgtgcatgaacgtcgatccacccggccattgtttc 43889853  T
Q  121 aaatctacacaataagaaatt 141  Q
    ||||||||||||| |||||||    
T  43889854 aaatctacacaattagaaatt 43889874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 49094690 - 49094579
Alignment:
Q  28 tcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatcta 127  Q
    |||||| ||||||||| | ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||  ||||||||| |||||||    
T  49094690 tcttaatgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccaccccgccattgttttaaatcta 49094591  T
Q  128 cacaataagaaa 139  Q
    ||||||||||||    
T  49094590 cacaataagaaa 49094579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 50 - 191
Target Start/End: Original strand, 6282607 - 6282747
Alignment:
Q  50 cgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctacacaataagaaattnnnnnnnn 149  Q
    |||||||||||||| ||||||||||| |||||| ||| ||||||||  | |||||||||| ||||| |||||||||||||||||||||||||            
T  6282607 cgaaccttcaacctttgaggttctccgccgttggattgtgcatgaagattgatccacccggccattttttcaaatctacacaataagaaatt-aaaaata 6282705  T
Q  150 ntcaatgaaaaactcattcaaacatttcatcaaacacttgat 191  Q
     |||||||||||||||||||||||||||||||||||||||||    
T  6282706 atcaatgaaaaactcattcaaacatttcatcaaacacttgat 6282747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 21 - 185
Target Start/End: Complemental strand, 31324126 - 31323963
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||| |||||| |  ||||||||||||||||||||||||||||||||||||||| ||  |||||||||| |    ||||||||| |||    
T  31324126 tgagacctcttaacgtgacaccaaggtaccgaaccttcaacctctgaggttctccaccgttgaattgtgtctgaacgtcgaacatatcgaccattgcttc 31324027  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaaca 185  Q
    |||||||||||||||||||||         ||||||||||||||||||||| |||||||||||||    
T  31324026 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaatatttcatcaaaca 31323963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 46816785 - 46816898
Alignment:
Q  28 tcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatcta 127  Q
    |||||| |||||| || | ||||||||||||||||| ||||||||||||| |||||||| |||||||||| ||||||||| | |||||| ||||||||||    
T  46816785 tcttaatgttacatcaaggcaccgaaccttcaacctatgaggttctccactgttgaattctgcatgaacgacgatccaccaggccattgattcaaatcta 46816884  T
Q  128 cacaataagaaatt 141  Q
    ||||||||||||||    
T  46816885 cacaataagaaatt 46816898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 28 - 189
Target Start/End: Complemental strand, 18412540 - 18412380
Alignment:
Q  28 tcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatcta 127  Q
    ||||||||| |||||| |   ||||| |||||| ||||||||||||||||||||||||| |||||||| ||||| |    || |||||||||||||||||    
T  18412540 tcttaacgtgacaccaaggtgccgaatcttcaatctctgaggttctccaccgttgaattgtgcatgaatgtcgaacatatcggccattgtttcaaatcta 18412441  T
Q  128 cacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||||||||||||         ||||||||||||||| ||||||||||| |||||||||||    
T  18412440 cacaataagaaatt-taaaacattcaatgaaaaactcaatcaaacatttcgtcaaacacttg 18412380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 56 - 141
Target Start/End: Complemental strand, 45937380 - 45937295
Alignment:
Q  56 ttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctacacaataagaaatt 141  Q
    |||||||| ||||||| ||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  45937380 ttcaacctttgaggttatccgccgttgaattgtgcatgaatgtcgatccacccgaccattgtttcaaatctacacaattagaaatt 45937295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 23 - 189
Target Start/End: Complemental strand, 10312222 - 10312067
Alignment:
Q  23 agacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaa 122  Q
    |||| |||||||||||||||| | ||||||||||||||||||||          ||||||||||||||||| |||||||||||| |||||||| ||||||    
T  10312222 agacctcttaacgttacaccaaggcaccgaaccttcaacctctg----------ccgttgaattatgcatgcacgtcgatccactcgaccattatttcaa 10312133  T
Q  123 atctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    || |||||||||| |||||         | |||||| ||||||||||||||||||||||||||||||    
T  10312132 atgtacacaataaaaaatt-aaaaataataaatgaataactcattcaaacatttcatcaaacacttg 10312067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 23 - 190
Target Start/End: Complemental strand, 13850699 - 13850533
Alignment:
Q  23 agacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaa 122  Q
    |||| |||||| || |||||| |  ||| ||||||||||||||||||||||||||||||||||| ||| |||||||||| |    || |||||| |||||    
T  13850699 agacctcttaatgtgacaccaaggtaccaaaccttcaacctctgaggttctccaccgttgaattgtgcttgaacgtcgaacatatcgcccattgcttcaa 13850600  T
Q  123 atctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttga 190  Q
    ||||| |||||||||||||         ||||||||||||||||||||||| ||||||||||| ||||    
T  13850599 atctatacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacaattcatcaaacatttga 13850533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 21412780 - 21412942
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||| ||||||| | | | ||||||||||||||||||||||| ||| ||||| |||| ||| |||||||||| |    || ||||||||||    
T  21412780 tgagacctcttaatgttacactaaggccccgaaccttcaacctctgaggttttccgccgttaaattgtgcttgaacgtcgaacatatcggccattgtttc 21412879  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaac 184  Q
    |||||||||||||||||||||         ||||||||||| ||||||||||||||||||||||    
T  21412880 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaattcattcaaacatttcatcaaac 21412942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 47657632 - 47657721
Alignment:
Q  52 aaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctacacaataagaaatt 141  Q
    |||||||| ||||||||||||||| |||||||||| ||||||||| ||||| ||| || ||| ||||||||||||||||||| |||||||    
T  47657632 aaccttcatcctctgaggttctccgccgttgaattgtgcatgaacatcgattcactcggccactgtttcaaatctacacaattagaaatt 47657721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 21 - 176
Target Start/End: Complemental strand, 13866215 - 13866060
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcg-atccacccgaccattgttt 119  Q
    |||||| ||||||||| |||||| |  ||||||||||||||||||||||||||||||||||||||| ||  ||||||||| ||  | | | || ||| ||    
T  13866215 tgagacctcttaacgtgacaccaaggtaccgaaccttcaacctctgaggttctccaccgttgaattgtgtttgaacgtcgaatatatcggcccgttgctt 13866116  T
Q  120 caaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacattt 176  Q
    ||||| ||||||||||||||||         ||||||||||||||||||||||||||    
T  13866115 caaatatacacaataagaaatt-aaatacaatcaatgaaaaactcattcaaacattt 13866060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 138
Target Start/End: Complemental strand, 22436863 - 22436751
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||| |||| | || |||||||||||| ||||| ||||||| ||||| |||| |||||||||||     |||||||||||| ||||    
T  22436863 tgagacctcttaacgttataccaaggcatcgaaccttcaacatctgaagttctccgccgttaaattgtgcatgaacgt-----cacccgaccattatttc 22436769  T
Q  121 aaatctacacaataagaa 138  Q
    |||| |||||||| ||||    
T  22436768 aaatgtacacaattagaa 22436751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 51028022 - 51028099
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgt 98  Q
    |||||| ||||||||||||||||   || |||||||||||||| ||||||||||| |||||||||| |||||||||||    
T  51028022 tgagacctcttaacgttacaccaacgcatcgaaccttcaacctgtgaggttctccgccgttgaattgtgcatgaacgt 51028099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 193
Target Start/End: Original strand, 29699698 - 29699740
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  29699698 tcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 29699740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 20759480 - 20759559
Alignment:
Q  108 cgaccattgtttcaaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||||||||| ||| |         |||||||||||||||||||||||||||||||||||||||    
T  20759480 cgaccattgtttcaaatctacacaataaaaaaattaaacaa--tcaatgaaaaactcattcaaacatttcatcaaacacttg 20759559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 20765871 - 20765950
Alignment:
Q  108 cgaccattgtttcaaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||||||||| ||| |         |||||||||||||||||||||||||||||||||||||||    
T  20765871 cgaccattgtttcaaatctacacaataaaaaaattaaacaa--tcaatgaaaaactcattcaaacatttcatcaaacacttg 20765950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 23124916 - 23124954
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||||||||||||||||||||    
T  23124916 tcaatgaaaaactcattcaaacatttcatcaaacacttg 23124954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 24074929 - 24074891
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24074929 tcaatgaaaaactcattcaaacatttcatcaaacacttg 24074891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 44100168 - 44100130
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||||||||||||||||||||    
T  44100168 tcaatgaaaaactcattcaaacatttcatcaaacacttg 44100130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 184
Target Start/End: Original strand, 12227833 - 12227905
Alignment:
Q  111 ccattgtttcaaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaac 184  Q
    |||||||||||||||||||| ||||||||||         ||||||||||||||||||||||||||||||||||    
T  12227833 ccattgtttcaaatctacaccataagaaattaaaaacaa-tcaatgaaaaactcattcaaacatttcatcaaac 12227905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 3510813 - 3510851
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  3510813 tcaatgaaaaattcattcaaacatttcatcaaacacttg 3510851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 190
Target Start/End: Original strand, 893502 - 893534
Alignment:
Q  158 aaaactcattcaaacatttcatcaaacacttga 190  Q
    |||||||||||||||||||||||||||||||||    
T  893502 aaaactcattcaaacatttcatcaaacacttga 893534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 25144317 - 25144281
Alignment:
Q  153 aatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||| ||||||||||||||||||||||||||    
T  25144317 aatgaaaaacacattcaaacatttcatcaaacacttg 25144281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 42420865 - 42420833
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaa 183  Q
    |||||||||||||||||||||||||||||||||    
T  42420865 tcaatgaaaaactcattcaaacatttcatcaaa 42420833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 188
Target Start/End: Complemental strand, 23950522 - 23950487
Alignment:
Q  153 aatgaaaaactcattcaaacatttcatcaaacactt 188  Q
    ||||||||| ||||||||||||||||||||||||||    
T  23950522 aatgaaaaagtcattcaaacatttcatcaaacactt 23950487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 12587470 - 12587432
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  12587470 tcaataaaaaattcattcaaacatttcatcaaacacttg 12587432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 17291778 - 17291740
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||||| ||||||||| |||||||||||||||||||||    
T  17291778 tcaatgagaaactcatttaaacatttcatcaaacacttg 17291740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 31931405 - 31931367
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||| ||||||||||||||||||| ||||||||||||||    
T  31931405 tcaacgaaaaactcattcaaacatctcatcaaacacttg 31931367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 141
Target Start/End: Complemental strand, 11284963 - 11284923
Alignment:
Q  101 atccacccgaccattgtttcaaatctacacaataagaaatt 141  Q
    ||||| ||||| ||||||||||||||||||||| |||||||    
T  11284963 atccaaccgactattgtttcaaatctacacaattagaaatt 11284923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 2e-57; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 49396656 - 49396485
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  49396656 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctatgaggttctccgccgttgaattgtgcatgaacgtcgatccacccggccattgtttc 49396557  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  49396556 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 49396485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 13972877 - 13972706
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||| ||||||||| | | ||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||    
T  13972877 tgagacctcttaaagttacaccaaggcgccgaaccttcaacctctgaggttctccgccgttgaattgtgcacgaacgtcgatccacccgaccattgtttc 13972778  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  13972777 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 13972706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 41780645 - 41780474
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | |||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||    
T  41780645 tgagacctcttaacgttacaccaaggcaccaaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatccacccgagcattgtttc 41780546  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         ||||||||||||| |||||||||||||||||||||||||||||    
T  41780545 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaacttattcaaacatttcatcaaacacttgatgt 41780474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 4209203 - 4209032
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||| ||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||  |||||||||    
T  4209203 tgagacctcttaacgttacaccaaggcaccgaatcttcaacctctgaggttctccgccgttgaattgtgcatgaacgttgatccacccggtcattgtttc 4209104  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  4209103 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 4209032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 44337573 - 44337744
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||| |||| | ||||||||||||||||||||||||||| | |||||||||| |||||||||| |||||||||| |||||||||||    
T  44337573 tgagacctcttaacgttataccaaggcaccgaaccttcaacctctgaggttcttcgccgttgaattgtgcatgaacgacgatccacccaaccattgtttc 44337672  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  44337673 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 44337744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 21 - 191
Target Start/End: Complemental strand, 44597653 - 44597484
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | |||||||| |||||||||||||||||||| ||||||||||  ||||||||||||||||||||| ||||||||||    
T  44597653 tgagacctcttaacgttacaccaaggcaccgaactttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccacccggccattgtttc 44597554  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgat 191  Q
    |||||||||||||||||||||         |||||||||||||||||||| ||||||||||||||||||||    
T  44597553 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaatcatttcatcaaacacttgat 44597484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 28 - 193
Target Start/End: Complemental strand, 6435717 - 6435553
Alignment:
Q  28 tcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatcta 127  Q
    |||||| ||||||||| | ||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||| |||||||||||||||||    
T  6435717 tcttaatgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgtgcatgaccgtcgatccacccggccattgtttcaaatcta 6435618  T
Q  128 cacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||||||||||||||         |||||||||||||||||||||||||||||||| ||||||||||    
T  6435617 cacaataagaaatt-aaaaacattcaatgaaaaactcattcaaacatttcatcaagcacttgatgt 6435553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 28 - 189
Target Start/End: Complemental strand, 18169970 - 18169810
Alignment:
Q  28 tcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatcta 127  Q
    |||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  18169970 tcttaacgttacaccaagacaccgaaccttcaacctctgcggttctccaccgttgaattgtgcatgaacgtcgatccacccgaccattgcttcaaatcta 18169871  T
Q  128 cacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||||||||||||         |||||||||| |||||||||||| |||||||||||||||    
T  18169870 cacaataagaaatt-aaaaacaatcaatgaaaagctcattcaaacaattcatcaaacacttg 18169810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 5765158 - 5764991
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||| ||||||||||    
T  5765158 tgagacctcttaacgttacaccaagacaccgaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatcaacccggccattgtttc 5765059  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||| ||||||||||||||||         ||||| |||||||||||||||||||||||||||||||||    
T  5765058 aaatatacacaataagaaatt-aaaaataatcaataaaaaactcattcaaacatttcatcaaacacttg 5764991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 19160269 - 19160098
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||| |||||||||     
T  19160269 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccacccggccattgtttt 19160170  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||||||||||||||||||| |         |||||||||||||||||||||||||||||| ||||||||||||    
T  19160169 aaatctacacaataagaaact-aaaaacaatcaatgaaaaactcattcaaacatttcatcgaacacttgatgt 19160098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 29435925 - 29435754
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||| ||||||||| | |||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  29435925 tgagacctcttaatgttacaccaagacaccgaacattcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatccacccggccattgtttc 29435826  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         || |||||||||||||||||||||||||||||| |||||||||    
T  29435825 aaatctacacaataagaaatt-aaaaaaaatcgatgaaaaactcattcaaacatttcatcaaagacttgatgt 29435754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 36909513 - 36909342
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||| | | ||||||||||||||||||||||||||||| |||||||||| ||| |||||||| |||||| |||| ||||||||    
T  36909513 tgagacctcttaacgttacactaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgtgcgtgaacgtcaatccacacgactattgtttc 36909414  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||||||||||||||||||| |         |||||||||||||||||||||||||||||||||||||||||||    
T  36909413 aaatctacacaataagaaa-taaaaaaaaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 36909342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 47488291 - 47488459
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||||| || | ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  47488291 tgagacctcttaacgttacatcaaggcaccgaaccttcaacctctgaggttctccgccgttgaattttgcatgaacgtcgatccacccgaccattgtttc 47488390  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaaca-tttcatcaaacacttg 189  Q
    |||||||||||||||||||||         |||||||||||||||||| |||| ||| ||||||||||||    
T  47488391 aaatctacacaataagaaatt-aaacacaatcaatgaaaaactcattccaacatttttatcaaacacttg 47488459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 29762475 - 29762645
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | || |||||||||||||||||||||||||| ||||||||||  |||||||||| |||||||||| ||||||||||    
T  29762475 tgagacctcttaacgttacaccaaggcatcgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgttgatccacccggccattgtttc 29762574  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         || ||||||||||||||||||||||||||||||||||||||||    
T  29762575 aaatctacacaataagaaatt-aaaaacaatc-atgaaaaactcattcaaacatttcatcaaacacttgatgt 29762645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 38046688 - 38046808
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  38046688 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatccacccgaccattgtttc 38046787  T
Q  121 aaatctacacaataagaaatt 141  Q
    ||||||||||||| |||||||    
T  38046788 aaatctacacaattagaaatt 38046808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 185
Target Start/End: Complemental strand, 17372679 - 17372516
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||| ||||||||||||||| |||||||| | |||||||||||||||||||||  ||||||||||    
T  17372679 tgagacctcttaacgttacaccaaggcaccgaaccttcagcctctgaggttctccgccgttgaagtgtgcatgaacgtcgatccacccagccattgtttc 17372580  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaaca 185  Q
    |||||||||||||||||||||         ||||||||||| |||||||||||||||||||||||    
T  17372579 aaatctacacaataagaaatt-aaaaataatcaatgaaaaattcattcaaacatttcatcaaaca 17372516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 27486944 - 27487114
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||| ||||||||||||||| ||||||||| ||||||||||  ||||||||||||||||||||| ||||||||||    
T  27486944 tgagacctcttaacgttacaccaaggcactgaaccttcaacctctaaggttctccgccgttgaattgcgcatgaacgtcgatccacccggccattgtttc 27487043  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||||||||| |||||||||||         ||||| |||||||||||||||||||||||||||||||||||||    
T  27487044 aaatctacaaaataagaaatt-aaaaacaatcaat-aaaaactcattcaaacatttcatcaaacacttgatgt 27487114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 181
Target Start/End: Original strand, 35526431 - 35526590
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||| ||||| ||||||||||| |||||||||| |||||||||||||||||||| | ||||||||||    
T  35526431 tgagacctcttaacgttacaccaaggcaccgaacctttaacctttgaggttctccgccgttgaattgtgcatgaacgtcgatccacctggccattgtttc 35526530  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatca 181  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||    
T  35526531 aaatctacacaataagaaatt-aaaaataatcaatgaaaaactcattcaaacatttcatca 35526590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 49427339 - 49427169
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | |||||||| |||||||||||||||||||| ||||||||||  ||||||| ||||||||||| | |||||||||     
T  49427339 tgagacctcttaacgttacaccaag-caccgaactttcaacctctgaggttctccgccgttgaattgcgcatgaatgtcgatccacctggccattgtttt 49427241  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  49427240 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 49427169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 28 - 193
Target Start/End: Original strand, 14174019 - 14174183
Alignment:
Q  28 tcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatcta 127  Q
    ||||||||||||||||   ||||||||||||||||||| ||||||||| |||||||||| |||||||||||||| ||||||| ||||||||||||| |||    
T  14174019 tcttaacgttacaccaaagcaccgaaccttcaacctctaaggttctccgccgttgaattgtgcatgaacgtcgaaccacccggccattgtttcaaaccta 14174118  T
Q  128 cacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||||||||||||||         ||||||| |||||||||||||||||||||||||||||| ||||    
T  14174119 cacaataagaaatt-taaaaaaatcaatgagaaactcattcaaacatttcatcaaacactttatgt 14174183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 21 - 186
Target Start/End: Complemental strand, 18842391 - 18842227
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||||||||   ||||||||||||||||||||||||||| | |||||||||| ||||||||||| ||||||| ||||||||| |||    
T  18842391 tgagacctcttaacgttacaccaaagcaccgaaccttcaacctctgaggttctacgccgttgaattgtgcatgaacgttgatccactcgaccattgcttc 18842292  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacac 186  Q
    |||||||||||||||||||||         ||||||||||||||||||||| ||||||||||||||    
T  18842291 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaatatttcatcaaacac 18842227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 13283658 - 13283492
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||| ||||||||| | ||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||| | ||||||||||    
T  13283658 tgagacctcttaatgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttga-ttgtgcatgaacgtcgatccacctggccattgtttc 13283560  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||         |||||| |||||||||||||||||| |||||||||||||    
T  13283559 aaatctacacaataagaaatt-aaaaataatcaatgcaaaactcattcaaacattccatcaaacacttg 13283492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 13635551 - 13635722
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||  ||||||| ||||||||||||| |||||||||     
T  13635551 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctttgaggttctccaccgttgaattgcgcatgaaggtcgatccacccggccattgtttt 13635650  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
     |||||||||||||||||| |         ||||| |||||||||||||||||||||||| ||||||||||||    
T  13635651 taatctacacaataagaaact-aaaaacaatcaatcaaaaactcattcaaacatttcatcgaacacttgatgt 13635722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 24270617 - 24270737
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | |||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||    
T  24270617 tgagacctcttaacgttacaccaaggcaccgaacctccaacctctgaggttctccaccattgaattgtgcatgaacgtcgatccacccggccattgtttc 24270716  T
Q  121 aaatctacacaataagaaatt 141  Q
    ||||||||||||| |||||||    
T  24270717 aaatctacacaattagaaatt 24270737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 50068513 - 50068680
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||| ||||| || | |||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||| |||    
T  50068513 tgagacctcttaacattacatcaaggcaccgaaccttcaacctctgagattctccgccgttgaattctgcatgaacgtcgatccacccgaccattgcttc 50068612  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||         | |||||||||||||||| ||||||| ||||||||||||    
T  50068613 aaatctacacaataagaaatt-aaacacaataaatgaaaaactcattccaacattttatcaaacacttg 50068680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 188
Target Start/End: Complemental strand, 51269754 - 51269588
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | || | |||||||||||| ||||||||||| ||||||||||  ||||||||||||||||||| | ||||||||||    
T  51269754 tgagacctcttaacgttacaccaaggcatcaaaccttcaacctttgaggttctccgccgttgaattgcgcatgaacgtcgatccacctggccattgtttc 51269655  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacactt 188  Q
    |||||||||||||||||||||         ||||||||||||||||| ||||||||||||||||||||    
T  51269654 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattaaaacatttcatcaaacactt 51269588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 17686601 - 17686721
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||| ||||||||| |||||||||| ||||||||||| |||||||||| ||||||||||    
T  17686601 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctcttaggttctccgccgttgaattgtgcatgaacgttgatccacccggccattgtttc 17686700  T
Q  121 aaatctacacaataagaaatt 141  Q
    ||||||||||||| |||||||    
T  17686701 aaatctacacaattagaaatt 17686721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 37778044 - 37777924
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||||||||| ||||||||||   ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||| |||    
T  37778044 tgagacatcttagcgttacaccaatgcaccgaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatccacccggccattgattc 37777945  T
Q  121 aaatctacacaataagaaatt 141  Q
    ||||||||||||| |||||||    
T  37777944 aaatctacacaattagaaatt 37777924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 23 - 189
Target Start/End: Original strand, 30310082 - 30310246
Alignment:
Q  23 agacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaa 122  Q
    |||| |||||||||||||||| | |||||||| |||||||| || |||||||| | |||||||| ||||||||||||||||||||||||||||| |||||    
T  30310082 agacctcttaacgttacaccaaggcaccgaactttcaacctatgcggttctccgctgttgaattgtgcatgaacgtcgatccacccgaccattgcttcaa 30310181  T
Q  123 atctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||         |||||| |||||||||||||||| |||||||||||||||    
T  30310182 atctacacaataagaaatt-aaaaacaatcaatg-aaaactcattcaaacaattcatcaaacacttg 30310246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 23 - 189
Target Start/End: Original strand, 39224453 - 39224618
Alignment:
Q  23 agacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaa 122  Q
    |||| |||||||||||||||| | |||| ||| ||||||||||| |||||||| || ||||||| |||||||||||||||||||||| | |||| |||||    
T  39224453 agacctcttaacgttacaccaagacaccaaactttcaacctctgcggttctccgccattgaattgtgcatgaacgtcgatccacccggctattgcttcaa 39224552  T
Q  123 atctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||         ||||||||||||||||||||||| |||||||||||||||    
T  39224553 atctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacaattcatcaaacacttg 39224618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 21 - 187
Target Start/End: Original strand, 42572030 - 42572195
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||| |||||||| | || |||||||||||||||||||||||||| |||||||||| ||||||||  | ||||||||||||| |||||||    
T  42572030 tgagacctcttaacattacaccaaggcatcgaaccttcaacctctgaggttctccgccgttgaattgtgcatgaattttgatccacccgacccttgtttc 42572129  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacact 187  Q
    |||||||| ||||||||||||         |||||||||||||||||||||||||||||||| ||||    
T  42572130 aaatctacgcaataagaaatt-aaaaataatcaatgaaaaactcattcaaacatttcatcaagcact 42572195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 46181806 - 46181974
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||| ||||| || | ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||    
T  46181806 tgagacctcttaacattacatcaaggcaccgaaccttcaacctctgaggttctccgccgttgaattctgcatgaacgtcgatccacccgaccattgcttc 46181905  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatg-aaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||||||||| |||| ||||         |||||| |||||||||||| ||||||| ||||||||||||    
T  46181906 aaatctacacattaagtaatt-taacataatcaatgaaaaaactcattccaacattttatcaaacacttg 46181974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 59 - 189
Target Start/End: Original strand, 24364060 - 24364189
Alignment:
Q  59 aacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctacacaataagaaattnnnnnnnnntcaatgaa 158  Q
    ||||||||||||||||| || ||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||         ||||||||    
T  24364060 aacctctgaggttctccgccattgaattgtgcatgaacgtcgatccacctggccattgtttcaaatctacacaataagaaatt-gaaaacaatcaatgaa 24364158  T
Q  159 aaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||||||||||||    
T  24364159 aaactcattcaaacatttcatcaaacacttg 24364189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 35184915 - 35184802
Alignment:
Q  28 tcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatcta 127  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||| |||||||| || |||| ||||| |||||||||||||||||    
T  35184915 tcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgtgcatgaatgttgatcgacccggccattgtttcaaatcta 35184816  T
Q  128 cacaataagaaatt 141  Q
    |||||| |||||||    
T  35184815 cacaattagaaatt 35184802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 23342593 - 23342473
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||| ||||||||| | |||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||  ||||| ||||    
T  23342593 tgagacctcttaatgttacaccaaggcaccgaaccttcaatctctgaggttctccgccgttgaattgtgcatgaacgtcgatccacccttccattttttc 23342494  T
Q  121 aaatctacacaataagaaatt 141  Q
    ||||||||||||| |||||||    
T  23342493 aaatctacacaattagaaatt 23342473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 35587183 - 35587303
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||  |||||||| | ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  35587183 tgagacctcttaattttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatccacccggccattgtttc 35587282  T
Q  121 aaatctacacaataagaaatt 141  Q
    |||| |||| ||| |||||||    
T  35587283 aaatgtacataattagaaatt 35587303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 47 - 189
Target Start/End: Original strand, 21484911 - 21485055
Alignment:
Q  47 caccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgacc---attgtttcaaatctacacaataagaaattnn 143  Q
    |||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||| ||   |||| ||||||||||||||||||||||||      
T  21484911 caccgaaccttcaacctctgcggttctccgccgttgaattgtgcatgaacgtcgatccacccggccattattgcttcaaatctacacaataagaaatt-a 21485009  T
Q  144 nnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
           | |||||||||||||||||||||||||||||||||||||    
T  21485010 aaaataataaatgaaaaactcattcaaacatttcatcaaacacttg 21485055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 47 - 189
Target Start/End: Original strand, 49599142 - 49599284
Alignment:
Q  47 caccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctacacaataagaaattnnnnn 146  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| | |||||| ||||||||||||||||||||||||         
T  49599142 caccgaaccttcaacctctgaggttctccgccgttgaattttgcatgaacgtcgatccacctggccattgcttcaaatctacacaataagaaatt-taac 49599240  T
Q  147 nnnntcaatg-aaaaactcattcaaacatttcatcaaacacttg 189  Q
        |||||| |||||||||||| ||||||| ||||||||||||    
T  49599241 aaaatcaatgaaaaaactcattccaacattttatcaaacacttg 49599284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 30 - 193
Target Start/End: Original strand, 49926630 - 49926792
Alignment:
Q  30 ttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctaca 129  Q
    ||||||| |||||| | ||| ||||||||||||||||||||||||  |||||||||| ||||||||| |||||||||||| ||||| |||||||||||      
T  49926630 ttaacgtcacaccaaggcactgaaccttcaacctctgaggttctctgccgttgaattgtgcatgaacatcgatccacccggccattatttcaaatctagg 49926729  T
Q  130 caataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||||||||||||         |||||||||||||||||||||||||| |||||| |||||||||    
T  49926730 caataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttgatcaaatacttgatgt 49926792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 28 - 189
Target Start/End: Original strand, 48568665 - 48568830
Alignment:
Q  28 tcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttca-----a 122  Q
    ||||||||||||| || | |||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||| ||||     |    
T  48568665 tcttaacgttacatcaaggcaccaaaccttcaacctctgaggttctccgccgttgaattatgcatgaacgtggatccacccggccattgcttcaaatcta 48568764  T
Q  123 atctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||         |||||||||||||||||| ||||||| ||||||||||||    
T  48568765 atctacacaataagaaatt-aaacacaatcaatgaaaaactcattccaacattttatcaaacacttg 48568830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 21 - 182
Target Start/End: Complemental strand, 17696998 - 17696838
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||| |  | | ||||||||||||||||||||||||||||| || ||||||| ||||||||||||||| ||||||||||||| ||     
T  17696998 tgagacctcttaacgttatatgaaggcaccgaaccttcaacctctgaggttctccgccattgaattctgcatgaacgtcgattcacccgaccattgcttt 17696899  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaa 182  Q
    ||||||||||||| |||||||         |||| |||||||||||||||||||||||||||    
T  17696898 aaatctacacaattagaaatt-aaacacaatcaaggaaaaactcattcaaacatttcatcaa 17696838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 27035572 - 27035738
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||| |||||| || | |||| |||||||||||||||||||||||| |||||| ||| ||||||||| |||||||||||| | |||| |||    
T  27035572 tgagacctcttaatgttacatcaagacacctaaccttcaacctctgaggttctccgccgttgcattctgcatgaacatcgatccacccg-caattgcttc 27035670  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||         |||||||||||||||||| ||||||| ||||||||||||    
T  27035671 aaatctacacaataagaaatt-aaacacaatcaatgaaaaactcattccaacattttatcaaacacttg 27035738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 39857160 - 39857280
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| |  |  |||||||||||||||||||||||||  ||||||||| |||||| ||||||||||||||| ||||||||||    
T  39857160 tgagacctcttaacgttacaccaaggaattgaaccttcaacctctgaggttctccgtcgttgaattgtgcatgtacgtcgatccacccggccattgtttc 39857259  T
Q  121 aaatctacacaataagaaatt 141  Q
    ||||||||||||| |||||||    
T  39857260 aaatctacacaattagaaatt 39857280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 12791527 - 12791648
Alignment:
Q  21 tgagacatcttaacgttacaccat-gtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgttt 119  Q
    |||||| |||||| |||||||||  | ||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||| |  ||||||||    
T  12791527 tgagacctcttaatgttacaccaaaggcaccgaaccttcaacctctgaagttctccgccgttgaattgtgcatgaacgtcgatccaccggggcattgttt 12791626  T
Q  120 caaatctacacaataagaaatt 141  Q
    |||||||||||||| |||||||    
T  12791627 caaatctacacaattagaaatt 12791648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 41875138 - 41875310
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||||| || | |||||||||||||||||| |||||||||| |||||||||| |||||||| || |||||||||| |||||| |||    
T  41875138 tgagacctcttaacgttacatcaaggcaccgaaccttcaacctccgaggttctccgccgttgaattctgcatgaatgtggatccacccggccattgcttc 41875237  T
Q  121 a-----aatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |     ||||||||||||||||||||         |||||||||||||||||| ||||||| ||||||||||||    
T  41875238 aaatctaatctacacaataagaaatt-aaacacaatcaatgaaaaactcattccaacattttatcaaacacttg 41875310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 45689073 - 45688954
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||||| || | |||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||  |||  |||||| |||    
T  45689073 tgagacctcttaacgttacatcaaggcaccgaac-ttcaacctctgaggttctccgccgttgaattctgcatgaacgtcgatcacccctgccattgcttc 45688975  T
Q  121 aaatctacacaataagaaatt 141  Q
    |||||||||||||||||||||    
T  45688974 aaatctacacaataagaaatt 45688954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 13148243 - 13148126
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||| |||||| || | || |||||||||||||| ||||||| ||   |||||||||||||||||||||||||||||||| ||||||||||    
T  13148243 tgagacctcttaaggttacatcaaggcatcgaaccttcaacctttgaggtt-tctgtcgttgaattatgcatgaacgtcgatccacccggccattgtttc 13148145  T
Q  121 aaatctacacaataagaaa 139  Q
    ||||||||||| |||||||    
T  13148144 aaatctacacagtaagaaa 13148126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 78 - 141
Target Start/End: Original strand, 49263256 - 49263319
Alignment:
Q  78 cgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctacacaataagaaatt 141  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  49263256 cgttgaattgtgcatgaacgtcgatccacccgaccattgcttcaaatctacacaataagaaatt 49263319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 16098214 - 16098352
Alignment:
Q  50 cgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatcc-acccgaccattgtttcaaatctacacaataagaaattnnnnnnn 148  Q
    |||||||||||| ||||||||||||||| |||||||||||||| ||| |||| |  | ||| | || | ||||||||||||||||||||||||           
T  16098214 cgaaccttcaacatctgaggttctccactgttgaattatgcattaacatcgaacatatccgtc-atcgcttcaaatctacacaataagaaattaaaaata 16098312  T
Q  149 nntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
      | |||||||||||||||||||||||||||||||||||||    
T  16098313 att-aatgaaaaactcattcaaacatttcatcaaacacttg 16098352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 19262760 - 19262799
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttga 190  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19262760 tcaatgaaaaactcattcaaacatttcatcaaacacttga 19262799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 21760751 - 21760790
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttga 190  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  21760751 tcaatgaaaaactcattcaaacatttcatcaaacacttga 21760790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 27259752 - 27259714
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27259752 tcaatgaaaaactcattcaaacatttcatcaaacacttg 27259714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 16532386 - 16532462
Alignment:
Q  112 cattgtttcaaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||| ||||||||||||||||||||||||         ||||||||||||||| |||||||||||||||||||||||    
T  16532386 cattgcttcaaatctacacaataagaaattaaaaacaa-tcaatgaaaaactcagtcaaacatttcatcaaacacttg 16532462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 34336026 - 34335989
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacactt 188  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34336026 tcaatgaaaaactcattcaaacatttcatcaaacactt 34335989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 186
Target Start/End: Complemental strand, 16077631 - 16077596
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacac 186  Q
    ||||||||||||||||||||||||||||||||||||    
T  16077631 tcaatgaaaaactcattcaaacatttcatcaaacac 16077596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 25803949 - 25803987
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  25803949 tcaatgaaaaacgcattcaaacatttcatcaaacacttg 25803987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 26793131 - 26793093
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  26793131 tcaatgaaaaattcattcaaacatttcatcaaacacttg 26793093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 48707299 - 48707337
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  48707299 tcaatgaaaaactcattcaaacatttcatcaagcacttg 48707337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 31452132 - 31452169
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacactt 188  Q
    |||||| |||||||||||||||||||||||||||||||    
T  31452132 tcaatggaaaactcattcaaacatttcatcaaacactt 31452169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 15471343 - 15471307
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacact 187  Q
    |||||||||||||| ||||||||||||||||||||||    
T  15471343 tcaatgaaaaactctttcaaacatttcatcaaacact 15471307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 27799480 - 27799442
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||||||||| ||| ||||||    
T  27799480 tcaatgaaaaactcattcaaacatttcagcaatcacttg 27799442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 39900288 - 39900326
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||| |||| |||||||||||||||||||||||||||||    
T  39900288 tcaaagaaatactcattcaaacatttcatcaaacacttg 39900326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 190
Target Start/End: Complemental strand, 12026351 - 12026319
Alignment:
Q  158 aaaactcattcaaacatttcatcaaacacttga 190  Q
    |||| ||||||||||||||||||||||||||||    
T  12026351 aaaagtcattcaaacatttcatcaaacacttga 12026319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 3e-56; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 23 - 193
Target Start/End: Original strand, 34803151 - 34803320
Alignment:
Q  23 agacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaa 122  Q
    |||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||    
T  34803151 agacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccaccgttgaattatacatgaacgtcgatccactcggccattgtttcaa 34803250  T
Q  123 atctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||||||| |||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  34803251 atctacaaaataagaaatt-aaaaaaaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 34803320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 3765974 - 3766145
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||| ||| ||||||||||    
T  3765974 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccaaccggccattgtttc 3766073  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  3766074 aaatctacacaataagaaatt-aaaaactatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 3766145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 32027881 - 32028052
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||  | ||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  32027881 tgagacctcttaacgttacaaaaagtcaccgaaccttcaacctttgaggttctccgccgttgaattgtgcatgaacgtcgatccacccggccattgtttc 32027980  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         ||||||| |||||||||||||||||||||||||||||||||||    
T  32027981 aaatctacacaataagaaatt-aaaaacaatcaatgataaactcattcaaacatttcatcaaacacttgatgt 32028052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 32037940 - 32038111
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||  | ||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  32037940 tgagacctcttaacgttacaaaaagtcaccgaaccttcaacctttgaggttctccgccgttgaattgtgcatgaacgtcgatccacccggccattgtttc 32038039  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         ||||||| |||||||||||||||||||||||||||||||||||    
T  32038040 aaatctacacaataagaaatt-aaaaacaatcaatgataaactcattcaaacatttcatcaaacacttgatgt 32038111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 35060221 - 35060388
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||||| || | ||||||||||||||||| ||||||||||| |||||||||| ||||||||| ||||||||||||||||||| |||    
T  35060221 tgagacctcttaacgttacatcaagacaccgaaccttcaacctatgaggttctccgccgttgaattctgcatgaacatcgatccacccgaccattgcttc 35060320  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||         |||||||||||||||||| ||||||| ||||||||||||    
T  35060321 aaatctacacaataagaaatt-aaacacaatcaatgaaaaactcattccaacattttatcaaacacttg 35060388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 29066489 - 29066343
Alignment:
Q  47 caccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctacacaataagaaattnnnnn 146  Q
    ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||         
T  29066489 caccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccacccggccattgtttcaaatctacacaataagaaatt-aaaa 29066391  T
Q  147 nnnntcaatg-aaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
        |||||| |||||||||||||||||||||||||||||||||||||    
T  29066390 acaatcaatgaaaaaactcattcaaacatttcatcaaacacttgatgt 29066343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 29075502 - 29075356
Alignment:
Q  47 caccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctacacaataagaaattnnnnn 146  Q
    ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||         
T  29075502 caccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccacccggccattgtttcaaatctacacaataagaaatt-aaaa 29075404  T
Q  147 nnnntcaatg-aaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
        |||||| |||||||||||||||||||||||||||||||||||||    
T  29075403 acaatcaatgaaaaaactcattcaaacatttcatcaaacacttgatgt 29075356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 801122 - 800955
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| ||||||||||||| || | ||||||||||||||||||| ||||||||| |||||||||| |||||||| ||||||||||||| |||||| |||    
T  801122 tgagacctcttaacgttacatcaaggcaccgaaccttcaacctcttaggttctccgccgttgaattctgcatgaatgtcgatccacccggccattgcttc 801023  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||         |||||||||||||||||| ||||||| ||||||||||||    
T  801022 aaatctacacaataagaaatt-aaacacaatcaatgaaaaactcattccaacattttatcaaacacttg 800955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 13402489 - 13402318
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| |  ||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |   | || ||||    
T  13402489 tgagacctcttaacgttacaccaaggtacctaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatccactctttctttttttc 13402390  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  13402389 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 13402318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 22305752 - 22305581
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||  ||||||| ||||||||||||| |||||||||     
T  22305752 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctttgaggttctccaccgttgaattgcgcatgaaggtcgatccacccggccattgtttt 22305653  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
     |||||||||||||||||| |         ||||| |||||||||||||||||||||||| ||||||||||||    
T  22305652 taatctacacaataagaaact-aaaaacaatcaatcaaaaactcattcaaacatttcatcgaacacttgatgt 22305581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 6205440 - 6205322
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||  |||||||||     
T  6205440 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccaccccgccattgtttt 6205341  T
Q  121 aaatctacacaataagaaa 139  Q
    |||||||||||||||||||    
T  6205340 aaatctacacaataagaaa 6205322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 11692407 - 11692289
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||  |||||||||     
T  11692407 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccaccccgccattgtttt 11692308  T
Q  121 aaatctacacaataagaaa 139  Q
    |||||||||||||||||||    
T  11692307 aaatctacacaataagaaa 11692289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 27640136 - 27640018
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||| ||||||||||| ||||| ||||  |||||||||||||||||||||||||||||||     
T  27640136 tgagacctcttaacgttacaccaaggcaccgaaccttcaacctttgaggttctccgccgttaaattgcgcatgaacgtcgatccacccgaccattgtttt 27640037  T
Q  121 aaatctacacaataagaaa 139  Q
    |||||||||||||||||||    
T  27640036 aaatctacacaataagaaa 27640018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 29 - 141
Target Start/End: Complemental strand, 12396724 - 12396612
Alignment:
Q  29 cttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctac 128  Q
    |||||||||| |||| | |||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  12396724 cttaacgttataccaaggcaccaaaccttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatccacccggccattgtttcaaatctac 12396625  T
Q  129 acaataagaaatt 141  Q
    ||||| |||||||    
T  12396624 acaattagaaatt 12396612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 29110473 - 29110325
Alignment:
Q  47 caccgaaccttcaacct-ctgaggttctccac-cgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctacacaataagaaattnnn 144  Q
    ||||||||||||||||| |||||||||||| | |||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||       
T  29110473 caccgaaccttcaaccttctgaggttctccgcacgttgaattgcgcatgaacgtcgatccacccggccattgtttcaaatctacacaataagaaatt-aa 29110375  T
Q  145 nnnnnntcaatg-aaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
          |||||| |||||||||||||||||||||||||||||||||||||    
T  29110374 aaacaatcaatgaaaaaactcattcaaacatttcatcaaacacttgatgt 29110325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 55 - 190
Target Start/End: Complemental strand, 14114957 - 14114823
Alignment:
Q  55 cttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctacacaataagaaattnnnnnnnnntcaa 154  Q
    ||||||||| ||||||||||  ||| |||||| ||||||||| ||||||||||||| |||||||||||||||||| |||||||||||         ||||    
T  14114957 cttcaacctatgaggttctctgccgatgaattctgcatgaacttcgatccacccgatcattgtttcaaatctacagaataagaaatt-gaaaacaatcaa 14114859  T
Q  155 tgaaaaactcattcaaacatttcatcaaacacttga 190  Q
    ||||||| || |||||||||||||||||||||||||    
T  14114858 tgaaaaattctttcaaacatttcatcaaacacttga 14114823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 62 - 193
Target Start/End: Original strand, 24021195 - 24021325
Alignment:
Q  62 ctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctacacaataagaaattnnnnnnnnntcaatgaaaaa 161  Q
    ||||||| |||||| ||||||||||  | |||||||| |||||||||| ||||||||| |||||||||||||||||||           ||||| |||||    
T  24021195 ctctgagcttctcccccgttgaattgcgtatgaacgttgatccacccggccattgttttaaatctacacaataagaaa-caaaaaacaatcaataaaaaa 24021293  T
Q  162 ctcattcaaacatttcatcaaacacttgatgt 193  Q
    || ||||||||||||| |||||||||||||||    
T  24021294 cttattcaaacatttcgtcaaacacttgatgt 24021325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 104 - 193
Target Start/End: Complemental strand, 29080209 - 29080120
Alignment:
Q  104 cacccgaccattgtttcaaatctacacaataagaaattnnnnnnnnntcaatgaaaaa-ctcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||| |||||||||||||||||||||||||||||||         ||||||||||| ||||||||||||||||||||||||||||||||    
T  29080209 cacccggccattgtttcaaatctacacaataagaaattaaaaacaa-tcaatgaaaaaactcattcaaacatttcatcaaacacttgatgt 29080120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 111 - 193
Target Start/End: Complemental strand, 29108044 - 29107962
Alignment:
Q  111 ccattgtttcaaatctacacaataagaaattnnnnnnnnntcaatgaaaaa-ctcattcaaacatttcatcaaacacttgatgt 193  Q
    |||||||||||||||||||||||||||||||         ||||||||||| ||||||||||||||||||||||||||||||||    
T  29108044 ccattgtttcaaatctacacaataagaaattaaaaacaa-tcaatgaaaaaactcattcaaacatttcatcaaacacttgatgt 29107962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 2192508 - 2192437
Alignment:
Q  62 ctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctacacaat 133  Q
    ||||||| |||||| ||||||||||  | |||||||| |||||||||| ||||||||| |||||||||||||    
T  2192508 ctctgagcttctcccccgttgaattgcgtatgaacgttgatccacccggccattgttttaaatctacacaat 2192437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 33718885 - 33718846
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttga 190  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  33718885 tcaatgaaaaactcattcaaacatttcatcaaacacttga 33718846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 34132409 - 34132370
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttga 190  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  34132409 tcaatgaaaaactcattcaaacatttcatcaaacacttga 34132370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 3097888 - 3097926
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3097888 tcaatgaaaaactcattcaaacatttcatcaaacacttg 3097926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 18744344 - 18744382
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18744344 tcaatgaaaaactcattcaaacatttcatcaaacacttg 18744382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 20242517 - 20242555
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20242517 tcaatgaaaaactcattcaaacatttcatcaaacacttg 20242555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 22136501 - 22136539
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22136501 tcaatgaaaaactcattcaaacatttcatcaaacacttg 22136539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 193
Target Start/End: Original strand, 30257731 - 30257815
Alignment:
Q  108 cgaccattgtttcaaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    |||| ||||||||||||||||||||||||||||          |||||||||||||||||||||||||| |||||||| |||||||    
T  30257731 cgacaattgtttcaaatctacacaataagaaat-aaaaaacaatcaatgaaaaactcattcaaacatttaatcaaacaattgatgt 30257815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 5973408 - 5973444
Alignment:
Q  154 atgaaaaactcattcaaacatttcatcaaacacttga 190  Q
    |||||||||||||||||||||||||||||||||||||    
T  5973408 atgaaaaactcattcaaacatttcatcaaacacttga 5973444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 189
Target Start/End: Original strand, 17465662 - 17465696
Alignment:
Q  155 tgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||||||||||||||||    
T  17465662 tgaaaaactcattcaaacatttcatcaaacacttg 17465696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 20243999 - 20243961
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  20243999 tcaatgaaaaattcattcaaacatttcatcaaacacttg 20243961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 22137983 - 22137945
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  22137983 tcaatgaaaaattcattcaaacatttcatcaaacacttg 22137945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 189
Target Start/End: Complemental strand, 26856507 - 26856475
Alignment:
Q  157 aaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||||||||||||||    
T  26856507 aaaaactcattcaaacatttcatcaaacacttg 26856475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 28051228 - 28051196
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaa 183  Q
    |||||||||||||||||||||||||||||||||    
T  28051228 tcaatgaaaaactcattcaaacatttcatcaaa 28051196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 185
Target Start/End: Complemental strand, 14095472 - 14095438
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaaca 185  Q
    |||||| ||||||||||||||||||||||||||||    
T  14095472 tcaatgtaaaactcattcaaacatttcatcaaaca 14095438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 21865272 - 21865310
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||| ||||||||||||||||||||||||| ||||||||    
T  21865272 tcaacgaaaaactcattcaaacatttcatcgaacacttg 21865310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 5570961 - 5570924
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacactt 188  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  5570961 tcaatgaaaaactcattcaaatatttcaacaaacactt 5570924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 185
Target Start/End: Complemental strand, 24559692 - 24559664
Alignment:
Q  157 aaaaactcattcaaacatttcatcaaaca 185  Q
    |||||||||||||||||||||||||||||    
T  24559692 aaaaactcattcaaacatttcatcaaaca 24559664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 1744 - 1577
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||| ||||||||| | || |||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||| ||||    
T  1744 tgagacctcttaatgttacaccaaggcatcgaaccttcaacctctgaggttctccgccgttgaattgcgcatgaacgtcgatccacccgaccattttttc 1645  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||    
T  1644 aaatctacacaataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttg 1577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 94; Significance: 4e-46; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 21 - 190
Target Start/End: Complemental strand, 24859 - 24691
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | |||| ||||||||||||||||||||||| || |||||||| |||| |||| |||||||| ||||||||||||||    
T  24859 tgagacctcttaacgttacaccaaggcaccaaaccttcaacctctgaggttctctacagttgaattgtgcaagaacatcgatccatccgaccattgtttc 24760  T
Q  121 aaatctacacaataagaaattnnnnnnnnntcaatgaaaaactcattcaaacatttcatcaaacacttga 190  Q
    ||||||||| |||||||||||         ||||||||||||||||||||||||||||||||||||||||    
T  24759 aaatctacataataagaaatt-aaaaacaatcaatgaaaaactcattcaaacatttcatcaaacacttga 24691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 81; Significance: 2e-38; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 21 - 133
Target Start/End: Complemental strand, 2221 - 2109
Alignment:
Q  21 tgagacatcttaacgttacaccatgtcaccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttc 120  Q
    |||||| |||||||||||||||| | || |||||||||||||||| ||||||||| |||||||||| |||||||| ||||||||||||||||||||||||    
T  2221 tgagacctcttaacgttacaccaaggcatcgaaccttcaacctctaaggttctccgccgttgaattgtgcatgaatgtcgatccacccgaccattgtttc 2122  T
Q  121 aaatctacacaat 133  Q
    |||||||||||||    
T  2121 aaatctacacaat 2109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 47 - 189
Target Start/End: Complemental strand, 39803 - 39662
Alignment:
Q  47 caccgaaccttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctacacaataagaaattnnnnn 146  Q
    ||||||||||||||||| ||||||||||| |||||||||| |||||||||||| ||||||||| |||||| ||||||||||||| ||||||||||         
T  39803 caccgaaccttcaacctttgaggttctccgccgttgaattgtgcatgaacgtcaatccacccggccattgcttcaaatctacaccataagaaatt-aaaa 39705  T
Q  147 nnnntcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
        ||||| |||||||||||||||||||||||||||||||||    
T  39704 acaatcaataaaaaactcattcaaacatttcatcaaacacttg 39662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 1 - 89
Alignment:
Q  53 accttcaacctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctacacaataagaaatt 141  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||| || ||||||||||||||||||||||| |||||||    
T  1 accttcaacctctgaggttctccgccgttgaattgtgcatgaacgtcgatccacgcggccattgtttcaaatctacacaattagaaatt 89  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 62 - 193
Target Start/End: Complemental strand, 85435 - 85305
Alignment:
Q  62 ctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctacacaataagaaattnnnnnnnnntcaatgaaaaa 161  Q
    ||||||| |||||| |||||||||| || |||||||| |||||||||||||||||||| |||||||||||||||||||           ||||| |||||    
T  85435 ctctgagcttctcccccgttgaattgtgtatgaacgttgatccacccgaccattgttttaaatctacacaataagaaa-caaaaaacaatcaataaaaaa 85337  T
Q  162 ctcattcaaacatttcatcaaacacttgatgt 193  Q
    || ||||||||||||| |||||||||||||||    
T  85336 cttattcaaacatttcgtcaaacacttgatgt 85305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 151 - 193
Target Start/End: Original strand, 36086 - 36128
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttgatgt 193  Q
    ||||| |||||||||||||||||||||||| ||||||||||||    
T  36086 tcaatcaaaaactcattcaaacatttcatcgaacacttgatgt 36128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 139
Target Start/End: Complemental strand, 14577 - 14500
Alignment:
Q  62 ctctgaggttctccaccgttgaattatgcatgaacgtcgatccacccgaccattgtttcaaatctacacaataagaaa 139  Q
    ||||||| |||||| ||||||||||  | ||||| || |||||| ||| ||| ||||| |||||||||||||||||||    
T  14577 ctctgagcttctcccccgttgaattgcgtatgaatgttgatccatccggccagtgttttaaatctacacaataagaaa 14500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 831 - 793
Alignment:
Q  151 tcaatgaaaaactcattcaaacatttcatcaaacacttg 189  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  831 tcaataaaaaactcattcaaacatttaatcaaacacttg 793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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