View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7170_low_10 (Length: 221)
Name: NF7170_low_10
Description: NF7170
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7170_low_10 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 19822595 - 19822375
Alignment:
| Q |
1 |
aggcaaacgtgcaccagtgccatgtgcaccaacctaatgcacatgaatgtaaagaagcacagtttaaataaacaagtgtagcaagggatagaattacatt |
100 |
Q |
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| T |
19822595 |
aggcaaacgtgcaccagtgccatgtgcaccaacctaatgcacatgaatgtaaagaagcacggtttaaataaacaagtgtaggaagggatagaattacatt |
19822496 |
T |
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| Q |
101 |
cactaaaccacatagaggtcattaaattatgtaaccataaataaaaaacaaccacaattttctgatttccttctaaaataacatttgcacactcctcgga |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
19822495 |
cactaaaccacatagaggtcattaaattatgtaaccataaataaaaaacaaccacaattttctgatttccttctaaaataacatttgcacactcctcaga |
19822396 |
T |
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| Q |
201 |
tacattctatactcaagcaaa |
221 |
Q |
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||||||||||||||||||||| |
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| T |
19822395 |
tacattctatactcaagcaaa |
19822375 |
T |
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