View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7173_high_7 (Length: 350)
Name: NF7173_high_7
Description: NF7173
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7173_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 18 - 342
Target Start/End: Complemental strand, 1721594 - 1721273
Alignment:
| Q |
18 |
cattatgaatatagcgtctcccctcaagagtatatgaacctttaaaatgtacgtgagtatcatgtatgggagtcagaagctagccttaagtacggccggt |
117 |
Q |
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| T |
1721594 |
cattatgaatatagcgtctcccctcaagagtatatgaacctttaaaatgtacgtgagtatcatgtatgggagtcagaagctagccctaagtacggccggt |
1721495 |
T |
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| Q |
118 |
tgggatgagcgaccgtccagggccataccaactattgtttatacatataattagcgtcaagcgattaacatctttctatttttagtgacaagcaacgata |
217 |
Q |
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| T |
1721494 |
tgggatgagcgaccgtccaaggccataccaactattgtttatacatataattagcgtcaagcgattaacatctttctatttttagtgacaagcaacagta |
1721395 |
T |
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| Q |
218 |
caataaaataataaataagtgaaggacaaaattgaaagnnnnnnnnngttacaccaaaacataatatattttattatataaaatcaaaatacaataggaa |
317 |
Q |
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| T |
1721394 |
caataaaataataaataagtgaaggacaaaattgaaa---aaaaaaagttacaccaaaacataatatattttattatataaaatcaaaatacaataggaa |
1721298 |
T |
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| Q |
318 |
tcaagttatcgtcgagagtattatc |
342 |
Q |
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| T |
1721297 |
tcaagttatcgtcgagagtattatc |
1721273 |
T |
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