View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7174_high_15 (Length: 243)
Name: NF7174_high_15
Description: NF7174
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7174_high_15 |
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Alignment Details
Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 3 - 229
Target Start/End: Complemental strand, 36285556 - 36285329
Alignment:
| Q |
3 |
tattagcatgcctttaattatgtatacagcttgtttgaattgcatagataactatg-ataatacagcatcattttgaagttgaatgttccaatatccctt |
101 |
Q |
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| T |
36285556 |
tattagcatgcctttaattatgtatacagcttgtttgaattgcatagataactatgcataatacagcatcattttgaagttgaatgttccaatatccctt |
36285457 |
T |
|
| Q |
102 |
aaaaataattgaaatatgtaaaatgatccaagcagttagtaattaggatgttatcttgtgataaaatgagtaccaaatattcgccccacattaatatgcc |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
36285456 |
aaaaataattgaaatatgtaaaatgatccaagcagttagtaattaggatgttatcttgtgataaaatgagtaccaaatattcaccccacattaatatgcc |
36285357 |
T |
|
| Q |
202 |
aatacacaagttaaagtatgatatgact |
229 |
Q |
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||| |||||||||||||||||||||||| |
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| T |
36285356 |
aattcacaagttaaagtatgatatgact |
36285329 |
T |
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