View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7174_high_9 (Length: 306)
Name: NF7174_high_9
Description: NF7174
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7174_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 18 - 295
Target Start/End: Original strand, 42044590 - 42044867
Alignment:
| Q |
18 |
attatcagtaccgcggttttctacaccagcagaatacagtttcaagtccaatcaagatcacagaattgagaaagctctcgaacagtgaggtaattaccgt |
117 |
Q |
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| T |
42044590 |
attatcagtactgcggttttctacaccagcagaatacagtttcaagtccaatcaagatcacagaattgagaaagctctcgaacagtgaggtaattaccgt |
42044689 |
T |
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| Q |
118 |
ttcaaactttcttagcaatcccgtttccacttcgtgccctctttgaatctggaggttgtggctcaccagaaattctcccggacccatcaaatacatgaac |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42044690 |
ttcaaactttcttagcaatcccgtttccacttcgtgccctctttgaatctggaggttgtggctcaccagaaattctcccggacccatcaaatacatgaac |
42044789 |
T |
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| Q |
218 |
aatatttgcagtttcattgaaaccttctccagagactgccaccgcaaaattccgaaaatactcaccactttgcttctt |
295 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42044790 |
aatatttgcagtttcattgaaaccttctccagagactgccaccgcaaaattccgaaaatactcaccactttgcttctt |
42044867 |
T |
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