View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7175_low_5 (Length: 386)

Name: NF7175_low_5
Description: NF7175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7175_low_5
NF7175_low_5
[»] chr5 (109 HSPs)
chr5 (11-186)||(9547799-9547975)
chr5 (11-186)||(29888298-29888472)
chr5 (11-186)||(33878019-33878193)
chr5 (17-186)||(25200923-25201092)
chr5 (17-186)||(25265078-25265247)
chr5 (11-186)||(13183905-13184081)
chr5 (17-186)||(22890363-22890533)
chr5 (11-186)||(11326524-11326700)
chr5 (24-184)||(23894107-23894267)
chr5 (11-186)||(13439757-13439926)
chr5 (17-186)||(41676603-41676772)
chr5 (17-186)||(2512945-2513115)
chr5 (17-186)||(9319345-9319516)
chr5 (17-186)||(12134049-12134220)
chr5 (17-186)||(30170363-30170534)
chr5 (17-156)||(3791435-3791573)
chr5 (17-186)||(28957884-28958054)
chr5 (17-156)||(37669613-37669751)
chr5 (17-156)||(37756874-37757012)
chr5 (216-370)||(3791628-3791780)
chr5 (216-370)||(37757070-37757222)
chr5 (17-156)||(8663605-8663743)
chr5 (17-156)||(18373665-18373803)
chr5 (17-156)||(24683334-24683472)
chr5 (17-156)||(24725861-24725999)
chr5 (17-156)||(30031309-30031447)
chr5 (17-156)||(30153912-30154050)
chr5 (17-156)||(32594404-32594542)
chr5 (17-156)||(34618412-34618550)
chr5 (17-156)||(37356773-37356911)
chr5 (17-156)||(37769117-37769255)
chr5 (17-156)||(40471679-40471817)
chr5 (17-156)||(43080146-43080284)
chr5 (17-186)||(26482285-26482457)
chr5 (24-186)||(33779388-33779553)
chr5 (24-156)||(23716117-23716249)
chr5 (17-149)||(28651129-28651260)
chr5 (216-370)||(32594195-32594349)
chr5 (216-370)||(34618606-34618757)
chr5 (216-370)||(37768912-37769061)
chr5 (216-370)||(40471471-40471622)
chr5 (17-156)||(15756986-15757125)
chr5 (17-156)||(31433334-31433472)
chr5 (216-370)||(8663396-8663549)
chr5 (216-367)||(13322754-13322902)
chr5 (216-367)||(31433552-31433700)
chr5 (24-186)||(15656857-15657021)
chr5 (216-370)||(30170558-30170708)
chr5 (17-156)||(13322959-13323097)
chr5 (17-156)||(18498860-18498998)
chr5 (24-186)||(22997209-22997375)
chr5 (17-156)||(31824537-31824675)
chr5 (17-156)||(33518250-33518388)
chr5 (216-370)||(43080339-43080494)
chr5 (17-154)||(5639681-5639817)
chr5 (24-186)||(24686251-24686418)
chr5 (24-156)||(6876206-6876337)
chr5 (216-370)||(15756773-15756927)
chr5 (216-369)||(18373456-18373607)
chr5 (216-370)||(24726057-24726208)
chr5 (216-370)||(28651325-28651481)
chr5 (216-370)||(31824328-31824482)
chr5 (216-369)||(5639876-5640026)
chr5 (216-370)||(18498646-18498801)
chr5 (216-370)||(6876392-6876544)
chr5 (24-186)||(18125489-18125656)
chr5 (24-156)||(24971919-24972052)
chr5 (216-370)||(37356564-37356715)
chr5 (216-370)||(37669407-37669557)
chr5 (216-370)||(28957706-28957860)
chr5 (24-186)||(33294426-33294592)
chr5 (216-370)||(24683529-24683681)
chr5 (24-186)||(30936534-30936701)
chr5 (216-370)||(13439588-13439737)
chr5 (216-373)||(26482480-26482636)
chr5 (24-156)||(11551255-11551392)
chr5 (216-369)||(15656680-15656829)
chr5 (216-365)||(22997043-22997186)
chr5 (216-370)||(33518461-33518619)
chr5 (216-372)||(18125319-18125469)
chr5 (216-369)||(33294618-33294766)
chr5 (216-369)||(33779579-33779727)
chr5 (216-370)||(41676794-41676944)
chr5 (216-369)||(23628060-23628207)
chr5 (216-365)||(24686071-24686215)
chr5 (216-370)||(30031503-30031667)
chr5 (300-369)||(2513231-2513300)
chr5 (300-373)||(9319645-9319718)
chr5 (300-373)||(12134344-12134417)
chr5 (216-370)||(30154106-30154270)
chr5 (216-365)||(30936726-30936870)
chr5 (216-367)||(29888105-29888260)
chr5 (216-288)||(22890556-22890627)
chr5 (216-288)||(2513136-2513206)
chr5 (216-288)||(13183795-13183866)
chr5 (216-370)||(33878228-33878386)
chr5 (216-289)||(9319542-9319612)
chr5 (216-289)||(12134244-12134314)
chr5 (216-281)||(23894292-23894355)
chr5 (216-370)||(9547614-9547773)
chr5 (216-288)||(11326730-11326801)
chr5 (216-365)||(11551447-11551589)
chr5 (216-370)||(25201122-25201271)
chr5 (216-370)||(25265277-25265426)
chr5 (303-370)||(11326825-11326892)
chr5 (303-370)||(13183697-13183764)
chr5 (300-365)||(24972075-24972140)
chr5 (24-82)||(23750653-23750711)
chr5 (300-370)||(23894375-23894445)
[»] chr6 (97 HSPs)
chr6 (11-186)||(26788703-26788877)
chr6 (11-186)||(27197076-27197250)
chr6 (11-186)||(27251990-27252164)
chr6 (11-186)||(13521335-13521509)
chr6 (11-186)||(27359253-27359427)
chr6 (11-186)||(27449596-27449770)
chr6 (11-186)||(14142547-14142721)
chr6 (11-186)||(28163375-28163552)
chr6 (11-186)||(8891614-8891789)
chr6 (11-186)||(8902849-8903024)
chr6 (17-186)||(22456249-22456418)
chr6 (11-186)||(33373556-33373734)
chr6 (17-186)||(27288512-27288684)
chr6 (17-186)||(27270725-27270894)
chr6 (17-186)||(27627851-27628020)
chr6 (17-184)||(17090593-17090760)
chr6 (216-370)||(29575091-29575243)
chr6 (17-156)||(4543951-4544089)
chr6 (17-156)||(26114586-26114724)
chr6 (17-156)||(26775786-26775924)
chr6 (17-156)||(27046270-27046408)
chr6 (17-156)||(27487011-27487149)
chr6 (17-156)||(28209336-28209475)
chr6 (216-370)||(16941994-16942146)
chr6 (216-370)||(27046464-27046616)
chr6 (216-370)||(3698161-3698312)
chr6 (17-156)||(3697963-3698101)
chr6 (17-156)||(4527168-4527306)
chr6 (17-156)||(4722310-4722448)
chr6 (17-156)||(4774765-4774903)
chr6 (17-156)||(16676021-16676159)
chr6 (17-156)||(16942203-16942341)
chr6 (17-156)||(29574895-29575033)
chr6 (17-156)||(30556192-30556330)
chr6 (24-186)||(26990780-26990945)
chr6 (216-374)||(27270547-27270700)
chr6 (216-370)||(4722102-4722253)
chr6 (17-149)||(4759646-4759777)
chr6 (216-370)||(26775578-26775729)
chr6 (216-369)||(30555984-30556135)
chr6 (24-186)||(20162505-20162665)
chr6 (24-186)||(22170166-22170326)
chr6 (17-156)||(27009612-27009750)
chr6 (216-373)||(27627672-27627825)
chr6 (216-370)||(27487209-27487362)
chr6 (216-370)||(28209530-28209683)
chr6 (24-186)||(15422459-15422624)
chr6 (24-186)||(16751743-16751908)
chr6 (216-370)||(4759841-4759992)
chr6 (216-370)||(26114379-26114530)
chr6 (24-156)||(29503304-29503435)
chr6 (216-370)||(29503491-29503645)
chr6 (24-186)||(27021028-27021194)
chr6 (216-370)||(4543741-4543894)
chr6 (24-186)||(29551364-29551529)
chr6 (216-370)||(4774958-4775109)
chr6 (24-186)||(22933021-22933187)
chr6 (24-186)||(23855466-23855632)
chr6 (24-186)||(26920269-26920435)
chr6 (216-370)||(16676214-16676369)
chr6 (24-156)||(13297125-13297258)
chr6 (216-377)||(27288321-27288487)
chr6 (216-370)||(33373381-33373530)
chr6 (24-186)||(24302757-24302925)
chr6 (216-370)||(4527362-4527513)
chr6 (24-184)||(24865606-24865771)
chr6 (216-365)||(22932856-22932999)
chr6 (216-365)||(23855301-23855444)
chr6 (216-370)||(27009806-27009960)
chr6 (216-369)||(27021216-27021364)
chr6 (216-365)||(26920457-26920601)
chr6 (216-370)||(17090410-17090561)
chr6 (216-370)||(24302584-24302734)
chr6 (216-365)||(13296923-13297066)
chr6 (216-365)||(26990970-26991113)
chr6 (218-365)||(20162697-20162844)
chr6 (218-365)||(22169987-22170134)
chr6 (216-365)||(15422292-15422434)
chr6 (216-370)||(14142345-14142502)
chr6 (216-370)||(26788904-26789061)
chr6 (216-370)||(27359061-27359218)
chr6 (216-370)||(27449404-27449561)
chr6 (216-370)||(13521142-13521300)
chr6 (216-369)||(29551556-29551708)
chr6 (216-365)||(24865797-24865940)
chr6 (216-370)||(27251805-27251963)
chr6 (216-370)||(28163580-28163736)
chr6 (216-288)||(8891508-8891579)
chr6 (216-288)||(8902743-8902814)
chr6 (318-370)||(34462473-34462525)
chr6 (303-370)||(8891419-8891486)
chr6 (303-370)||(8902654-8902721)
chr6 (303-370)||(27197363-27197430)
chr6 (253-367)||(16751937-16752047)
chr6 (303-370)||(22456065-22456132)
chr6 (216-288)||(27197275-27197345)
chr6 (216-288)||(22456152-22456223)
[»] chr7 (76 HSPs)
chr7 (17-186)||(16043209-16043378)
chr7 (17-186)||(16448086-16448255)
chr7 (11-186)||(2776124-2776298)
chr7 (11-186)||(26485458-26485632)
chr7 (11-186)||(26682205-26682379)
chr7 (11-186)||(39210228-39210402)
chr7 (11-186)||(45734182-45734358)
chr7 (11-186)||(31087711-31087885)
chr7 (11-156)||(2108280-2108426)
chr7 (17-186)||(4201275-4201445)
chr7 (17-186)||(26317955-26318126)
chr7 (17-156)||(5145459-5145597)
chr7 (17-156)||(16749633-16749771)
chr7 (17-156)||(17525418-17525556)
chr7 (17-156)||(17527659-17527797)
chr7 (17-156)||(26668033-26668171)
chr7 (17-156)||(45389106-45389244)
chr7 (17-156)||(3447192-3447330)
chr7 (17-156)||(4143365-4143503)
chr7 (216-372)||(4201466-4201620)
chr7 (17-156)||(9620537-9620675)
chr7 (17-156)||(11442765-11442903)
chr7 (17-156)||(26273213-26273351)
chr7 (17-156)||(26437143-26437281)
chr7 (17-156)||(26514667-26514805)
chr7 (17-156)||(26535989-26536127)
chr7 (17-156)||(31126806-31126944)
chr7 (17-156)||(31562508-31562647)
chr7 (24-186)||(5129885-5130050)
chr7 (24-186)||(5161412-5161577)
chr7 (216-370)||(16734370-16734522)
chr7 (216-370)||(17527451-17527603)
chr7 (216-370)||(3447384-3447535)
chr7 (216-370)||(9620729-9620879)
chr7 (17-156)||(16734578-16734717)
chr7 (17-156)||(24590660-24590798)
chr7 (216-370)||(11442962-11443116)
chr7 (216-370)||(16749426-16749577)
chr7 (216-370)||(17525612-17525763)
chr7 (216-370)||(45389298-45389449)
chr7 (24-186)||(10914952-10915118)
chr7 (216-369)||(26437336-26437485)
chr7 (216-370)||(26667823-26667976)
chr7 (216-370)||(31562299-31562454)
chr7 (24-186)||(2156466-2156631)
chr7 (216-369)||(26535783-26535935)
chr7 (216-370)||(4143155-4143309)
chr7 (216-370)||(5145249-5145404)
chr7 (24-156)||(16501518-16501651)
chr7 (24-156)||(16516554-16516687)
chr7 (216-370)||(31127001-31127152)
chr7 (216-370)||(26514860-26515021)
chr7 (24-186)||(11422859-11423027)
chr7 (216-369)||(24590444-24590602)
chr7 (216-365)||(5130076-5130220)
chr7 (216-373)||(26272992-26273156)
chr7 (216-365)||(16501308-16501451)
chr7 (216-351)||(16516358-16516487)
chr7 (216-288)||(2108150-2108221)
chr7 (216-370)||(16043400-16043548)
chr7 (303-373)||(26317754-26317824)
chr7 (216-288)||(10914857-10914927)
chr7 (216-365)||(5161603-5161747)
chr7 (216-369)||(2776342-2776498)
chr7 (216-365)||(11422693-11422837)
chr7 (216-365)||(2156655-2156798)
chr7 (217-370)||(45734401-45734558)
chr7 (216-289)||(26317862-26317932)
chr7 (216-370)||(26681999-26682157)
chr7 (216-288)||(31087607-31087678)
chr7 (216-288)||(39210122-39210193)
chr7 (303-370)||(26512589-26512656)
chr7 (303-370)||(31087515-31087582)
chr7 (303-370)||(39210032-39210099)
chr7 (216-281)||(16448002-16448064)
chr7 (216-275)||(26512691-26512749)
[»] chr2 (89 HSPs)
chr2 (17-186)||(21701355-21701524)
chr2 (11-186)||(3785371-3785545)
chr2 (11-186)||(16164362-16164536)
chr2 (11-186)||(22925336-22925510)
chr2 (11-186)||(34157727-34157901)
chr2 (11-186)||(27119405-27119581)
chr2 (11-186)||(31890676-31890852)
chr2 (17-186)||(27779103-27779272)
chr2 (17-186)||(27818861-27819030)
chr2 (11-184)||(27393440-27393612)
chr2 (17-184)||(19454614-19454782)
chr2 (17-186)||(11633375-11633545)
chr2 (17-186)||(34288235-34288404)
chr2 (17-186)||(34293295-34293464)
chr2 (11-137)||(34302700-34302827)
chr2 (17-186)||(37949512-37949682)
chr2 (216-370)||(40235589-40235739)
chr2 (11-131)||(5807170-5807291)
chr2 (17-156)||(9348204-9348342)
chr2 (216-370)||(13934560-13934711)
chr2 (17-156)||(258975-259113)
chr2 (17-156)||(12588691-12588829)
chr2 (17-156)||(12714824-12714962)
chr2 (17-156)||(13934766-13934904)
chr2 (17-156)||(16827560-16827698)
chr2 (17-156)||(16893783-16893921)
chr2 (17-156)||(21675404-21675542)
chr2 (17-156)||(34863561-34863699)
chr2 (17-156)||(37684131-37684269)
chr2 (17-156)||(37699396-37699534)
chr2 (17-156)||(37927251-37927389)
chr2 (17-156)||(39050044-39050182)
chr2 (17-156)||(39891955-39892093)
chr2 (216-367)||(19414517-19414666)
chr2 (216-370)||(27805781-27805934)
chr2 (216-367)||(39892148-39892297)
chr2 (216-370)||(258766-258918)
chr2 (24-186)||(23126754-23126919)
chr2 (216-369)||(16893977-16894128)
chr2 (17-149)||(27805588-27805719)
chr2 (17-156)||(31878162-31878300)
chr2 (17-156)||(32051679-32051817)
chr2 (216-370)||(12588884-12589039)
chr2 (216-370)||(34863762-34863915)
chr2 (216-370)||(37949335-37949488)
chr2 (216-370)||(39049832-39049988)
chr2 (216-370)||(12714614-12714766)
chr2 (17-156)||(19414721-19414859)
chr2 (24-156)||(40235399-40235533)
chr2 (216-370)||(37927445-37927600)
chr2 (216-369)||(16827352-16827504)
chr2 (24-156)||(20839789-20839922)
chr2 (24-186)||(27432630-27432797)
chr2 (216-370)||(34288428-34288580)
chr2 (216-370)||(34293488-34293640)
chr2 (216-370)||(9347999-9348149)
chr2 (24-186)||(12657430-12657596)
chr2 (24-186)||(28884102-28884268)
chr2 (216-370)||(31878361-31878517)
chr2 (216-370)||(21675188-21675348)
chr2 (24-156)||(37377049-37377185)
chr2 (216-370)||(37377240-37377402)
chr2 (216-370)||(32051878-32052034)
chr2 (216-370)||(11633197-11633352)
chr2 (216-369)||(28884290-28884437)
chr2 (300-370)||(37683908-37683978)
chr2 (300-370)||(37699173-37699243)
chr2 (216-365)||(20839995-20840139)
chr2 (216-369)||(23126582-23126729)
chr2 (216-365)||(27432459-27432602)
chr2 (219-370)||(27119625-27119771)
chr2 (216-289)||(37684004-37684075)
chr2 (216-289)||(37699269-37699340)
chr2 (216-365)||(12657618-12657762)
chr2 (216-370)||(21701183-21701334)
chr2 (216-370)||(34271786-34271934)
chr2 (216-370)||(16164571-16164727)
chr2 (216-370)||(34157935-34158091)
chr2 (216-288)||(27393637-27393708)
chr2 (303-370)||(3785673-3785740)
chr2 (216-370)||(22925145-22925304)
chr2 (216-281)||(19454525-19454588)
chr2 (132-186)||(34271985-34272039)
chr2 (216-370)||(27779323-27779481)
chr2 (216-370)||(27819080-27819238)
chr2 (216-288)||(3785581-3785652)
chr2 (216-288)||(31890576-31890647)
chr2 (303-370)||(31890488-31890555)
chr2 (303-370)||(27393726-27393793)
[»] chr8 (49 HSPs)
chr8 (11-186)||(19658358-19658534)
chr8 (11-186)||(18711350-18711524)
chr8 (11-186)||(21374401-21374575)
chr8 (11-186)||(44563863-44564037)
chr8 (11-186)||(33245386-33245563)
chr8 (11-184)||(22079066-22079238)
chr8 (24-186)||(16285341-16285503)
chr8 (17-186)||(19206519-19206690)
chr8 (17-156)||(12090915-12091054)
chr8 (17-156)||(29831207-29831345)
chr8 (17-186)||(31356410-31356581)
chr8 (216-370)||(9356704-9356856)
chr8 (17-156)||(19676326-19676464)
chr8 (17-156)||(28360147-28360285)
chr8 (24-186)||(19689990-19690156)
chr8 (17-156)||(31488064-31488203)
chr8 (17-156)||(33260608-33260746)
chr8 (216-370)||(3327489-3327642)
chr8 (216-368)||(19676525-19676676)
chr8 (216-370)||(29831404-29831557)
chr8 (216-370)||(31356606-31356759)
chr8 (24-186)||(14559516-14559681)
chr8 (24-186)||(16279445-16279610)
chr8 (24-156)||(9356515-9356646)
chr8 (17-156)||(3327698-3327837)
chr8 (24-186)||(18792599-18792765)
chr8 (216-370)||(28359937-28360090)
chr8 (216-370)||(31487857-31488010)
chr8 (24-186)||(2135417-2135582)
chr8 (216-370)||(12090708-12090860)
chr8 (216-373)||(19206344-19206496)
chr8 (24-156)||(27607095-27607228)
chr8 (216-370)||(33260806-33260965)
chr8 (216-369)||(18792787-18792935)
chr8 (216-369)||(27606891-27607038)
chr8 (216-365)||(14559706-14559850)
chr8 (216-370)||(19658186-19658335)
chr8 (216-288)||(15770672-15770742)
chr8 (216-365)||(19690180-19690324)
chr8 (216-370)||(33245592-33245740)
chr8 (216-365)||(2135250-2135394)
chr8 (216-370)||(21374209-21374365)
chr8 (216-365)||(16279634-16279776)
chr8 (216-370)||(44564073-44564231)
chr8 (216-365)||(16285525-16285669)
chr8 (216-370)||(18711558-18711715)
chr8 (216-281)||(22078976-22079040)
chr8 (28-186)||(15770487-15770646)
chr8 (303-370)||(22078895-22078962)
[»] chr3 (123 HSPs)
chr3 (11-186)||(5713909-5714083)
chr3 (11-186)||(5724819-5724993)
chr3 (11-186)||(5767375-5767549)
chr3 (11-186)||(31033477-31033651)
chr3 (11-186)||(32293476-32293650)
chr3 (11-186)||(17993186-17993360)
chr3 (11-186)||(4626626-4626802)
chr3 (11-186)||(5653069-5653245)
chr3 (17-184)||(18532234-18532402)
chr3 (17-186)||(19696338-19696508)
chr3 (11-156)||(29663242-29663388)
chr3 (45-186)||(16622729-16622869)
chr3 (17-186)||(7075058-7075228)
chr3 (24-186)||(32441007-32441171)
chr3 (17-186)||(4418765-4418936)
chr3 (17-156)||(5468831-5468969)
chr3 (17-156)||(8213584-8213722)
chr3 (17-156)||(10397979-10398117)
chr3 (17-156)||(18244585-18244723)
chr3 (17-186)||(20575089-20575259)
chr3 (17-156)||(28023121-28023259)
chr3 (17-186)||(28114196-28114366)
chr3 (216-370)||(5594424-5594576)
chr3 (216-369)||(7998601-7998752)
chr3 (216-370)||(29663037-29663187)
chr3 (17-156)||(4344961-4345099)
chr3 (17-156)||(5594631-5594769)
chr3 (17-156)||(5607596-5607734)
chr3 (216-372)||(11108417-11108571)
chr3 (17-156)||(11108623-11108761)
chr3 (17-156)||(21676539-21676677)
chr3 (17-156)||(22869130-22869268)
chr3 (17-156)||(22884189-22884327)
chr3 (17-156)||(24330005-24330143)
chr3 (17-156)||(31962746-31962885)
chr3 (17-156)||(36995474-36995612)
chr3 (17-156)||(47025299-47025437)
chr3 (17-156)||(48467773-48467911)
chr3 (17-156)||(51783868-51784006)
chr3 (24-186)||(8287711-8287876)
chr3 (216-370)||(7075252-7075402)
chr3 (216-370)||(8213777-8213928)
chr3 (24-156)||(17983230-17983361)
chr3 (24-186)||(20067896-20068060)
chr3 (216-370)||(5469029-5469181)
chr3 (17-156)||(7998408-7998546)
chr3 (24-186)||(15739333-15739499)
chr3 (17-156)||(18227037-18227175)
chr3 (216-372)||(4418957-4419110)
chr3 (216-370)||(17983016-17983169)
chr3 (24-186)||(6203759-6203924)
chr3 (216-370)||(5015757-5015907)
chr3 (24-156)||(10644923-10645054)
chr3 (24-186)||(4794871-4795037)
chr3 (17-156)||(28341025-28341164)
chr3 (24-186)||(35882619-35882785)
chr3 (216-370)||(51784064-51784216)
chr3 (216-370)||(18244779-18244934)
chr3 (24-186)||(18332481-18332646)
chr3 (216-370)||(20574910-20575063)
chr3 (24-186)||(8297825-8297990)
chr3 (24-156)||(18275325-18275457)
chr3 (24-156)||(18290626-18290758)
chr3 (24-156)||(18305927-18306059)
chr3 (216-370)||(36995265-36995419)
chr3 (17-156)||(5015558-5015696)
chr3 (216-370)||(48467967-48468120)
chr3 (24-186)||(4723484-4723649)
chr3 (216-370)||(28114021-28114172)
chr3 (216-370)||(10645112-10645266)
chr3 (216-370)||(21676733-21676896)
chr3 (24-186)||(15890945-15891111)
chr3 (216-367)||(22868918-22869072)
chr3 (216-367)||(22883977-22884131)
chr3 (24-186)||(29146994-29147160)
chr3 (216-370)||(47025492-47025646)
chr3 (216-370)||(18227232-18227389)
chr3 (216-370)||(28023318-28023475)
chr3 (216-370)||(24330199-24330356)
chr3 (24-186)||(18053115-18053281)
chr3 (24-156)||(22385849-22385983)
chr3 (216-370)||(28341219-28341370)
chr3 (216-370)||(4344743-4344904)
chr3 (216-370)||(10398173-10398337)
chr3 (216-365)||(8298015-8298159)
chr3 (216-365)||(32441195-32441339)
chr3 (216-370)||(5607381-5607539)
chr3 (216-369)||(4723675-4723823)
chr3 (216-365)||(6203948-6204091)
chr3 (216-365)||(15890777-15890922)
chr3 (216-369)||(20068085-20068232)
chr3 (216-369)||(4794703-4794849)
chr3 (216-365)||(8287542-8287686)
chr3 (216-365)||(22385650-22385793)
chr3 (216-365)||(35882811-35882954)
chr3 (216-370)||(19696534-19696684)
chr3 (219-288)||(18275198-18275266)
chr3 (219-288)||(18290499-18290567)
chr3 (219-288)||(18305800-18305868)
chr3 (218-370)||(5653273-5653418)
chr3 (216-365)||(15739166-15739309)
chr3 (216-365)||(29146828-29146971)
chr3 (300-369)||(31962523-31962593)
chr3 (216-289)||(31962617-31962688)
chr3 (217-370)||(4626837-4626994)
chr3 (216-370)||(31033287-31033444)
chr3 (216-365)||(18053303-18053450)
chr3 (216-288)||(5714120-5714191)
chr3 (216-288)||(5725030-5725101)
chr3 (216-288)||(5767267-5767338)
chr3 (216-288)||(17993072-17993143)
chr3 (216-288)||(32293677-32293748)
chr3 (303-370)||(5714215-5714282)
chr3 (303-370)||(5725125-5725192)
chr3 (303-370)||(5767176-5767243)
chr3 (303-370)||(17992982-17993049)
chr3 (303-370)||(32293770-32293837)
chr3 (216-288)||(18532429-18532498)
chr3 (219-281)||(16622643-16622703)
chr3 (216-288)||(18332668-18332739)
chr3 (300-365)||(18332760-18332825)
chr3 (17-52)||(16624978-16625013)
chr3 (334-367)||(6540812-6540845)
[»] chr1 (19 HSPs)
chr1 (17-184)||(16206235-16206402)
chr1 (11-186)||(28152624-28152798)
chr1 (17-184)||(20462865-20463031)
chr1 (17-184)||(20339656-20339822)
chr1 (17-186)||(41791509-41791679)
chr1 (216-372)||(41791332-41791486)
chr1 (23-156)||(10946969-10947101)
chr1 (216-370)||(10964749-10964899)
chr1 (216-370)||(10947158-10947311)
chr1 (17-156)||(28586865-28587004)
chr1 (24-156)||(51640109-51640240)
chr1 (24-156)||(10964561-10964692)
chr1 (216-370)||(28587065-28587219)
chr1 (216-370)||(51640295-51640452)
chr1 (216-370)||(20339467-20339620)
chr1 (216-281)||(16206142-16206205)
chr1 (219-370)||(28152838-28152986)
chr1 (216-288)||(20463062-20463133)
chr1 (301-370)||(16206055-16206124)
[»] chr4 (52 HSPs)
chr4 (17-184)||(15283131-15283299)
chr4 (11-186)||(24459964-24460140)
chr4 (25-184)||(1902165-1902324)
chr4 (17-184)||(15229769-15229941)
chr4 (11-184)||(15389583-15389755)
chr4 (17-186)||(54835287-54835459)
chr4 (17-186)||(5007773-5007944)
chr4 (24-186)||(24590556-24590719)
chr4 (24-186)||(34187161-34187324)
chr4 (216-370)||(6571950-6572103)
chr4 (17-156)||(18798846-18798984)
chr4 (17-156)||(27161549-27161687)
chr4 (216-370)||(27161341-27161493)
chr4 (17-156)||(33672031-33672169)
chr4 (17-156)||(39852538-39852676)
chr4 (17-156)||(40103871-40104009)
chr4 (216-370)||(18798638-18798790)
chr4 (216-370)||(54835485-54835636)
chr4 (216-370)||(33671824-33671975)
chr4 (216-370)||(39852731-39852882)
chr4 (24-156)||(6571760-6571894)
chr4 (17-156)||(30755654-30755793)
chr4 (17-156)||(31124751-31124889)
chr4 (216-372)||(5007968-5008122)
chr4 (216-370)||(14100637-14100788)
chr4 (17-156)||(14100441-14100579)
chr4 (24-186)||(24114569-24114735)
chr4 (24-168)||(14666925-14667071)
chr4 (216-367)||(21971795-21971943)
chr4 (17-156)||(21971601-21971739)
chr4 (24-186)||(17014950-17015117)
chr4 (24-156)||(14761536-14761668)
chr4 (216-370)||(40103661-40103811)
chr4 (216-367)||(30755851-30756002)
chr4 (24-156)||(36342746-36342879)
chr4 (216-370)||(31124536-31124692)
chr4 (216-365)||(34186989-34187133)
chr4 (216-369)||(24590386-24590533)
chr4 (216-351)||(1902351-1902479)
chr4 (219-365)||(14667116-14667256)
chr4 (216-288)||(14761409-14761480)
chr4 (216-348)||(15229969-15230095)
chr4 (216-369)||(24114758-24114906)
chr4 (306-370)||(18315202-18315266)
chr4 (216-281)||(15283039-15283102)
chr4 (216-365)||(17015142-17015286)
chr4 (216-288)||(24459851-24459922)
chr4 (216-369)||(36342542-36342691)
chr4 (303-370)||(24459762-24459829)
chr4 (216-279)||(15389495-15389557)
chr4 (303-372)||(15389400-15389469)
chr4 (300-370)||(15282952-15283022)
[»] scaffold0109 (2 HSPs)
scaffold0109 (11-186)||(22277-22451)
scaffold0109 (216-370)||(22474-22627)
[»] scaffold0260 (2 HSPs)
scaffold0260 (17-184)||(1979-2145)
scaffold0260 (216-370)||(1790-1943)
[»] scaffold0032 (3 HSPs)
scaffold0032 (11-184)||(119261-119433)
scaffold0032 (216-289)||(119162-119234)
scaffold0032 (303-370)||(119078-119145)
[»] scaffold0748 (1 HSPs)
scaffold0748 (216-377)||(6685-6848)
[»] scaffold0124 (3 HSPs)
scaffold0124 (17-142)||(45862-45987)
scaffold0124 (24-186)||(32344-32513)
scaffold0124 (216-369)||(32541-32690)
[»] scaffold1697 (2 HSPs)
scaffold1697 (216-369)||(453-606)
scaffold1697 (24-132)||(696-804)
[»] scaffold0038 (2 HSPs)
scaffold0038 (17-156)||(9834-9973)
scaffold0038 (216-370)||(10028-10181)
[»] scaffold0237 (2 HSPs)
scaffold0237 (216-369)||(12953-13104)
scaffold0237 (17-156)||(13163-13301)
[»] scaffold0415 (2 HSPs)
scaffold0415 (17-156)||(7900-8038)
scaffold0415 (216-370)||(8093-8243)
[»] scaffold0350 (2 HSPs)
scaffold0350 (17-156)||(5470-5608)
scaffold0350 (222-288)||(5345-5409)
[»] scaffold0159 (8 HSPs)
scaffold0159 (17-156)||(11416-11555)
scaffold0159 (17-156)||(7421-7560)
scaffold0159 (17-156)||(20974-21113)
scaffold0159 (216-370)||(21671-21828)
scaffold0159 (216-370)||(7203-7361)
scaffold0159 (216-370)||(20756-20914)
scaffold0159 (107-156)||(21562-21611)
scaffold0159 (216-276)||(11614-11673)
[»] scaffold0144 (2 HSPs)
scaffold0144 (17-156)||(24434-24572)
scaffold0144 (216-370)||(24215-24375)
[»] scaffold0089 (6 HSPs)
scaffold0089 (24-186)||(45183-45349)
scaffold0089 (24-156)||(31649-31781)
scaffold0089 (24-186)||(38267-38433)
scaffold0089 (216-365)||(38095-38238)
scaffold0089 (216-365)||(45020-45163)
scaffold0089 (216-288)||(31842-31913)
[»] scaffold0336 (2 HSPs)
scaffold0336 (216-370)||(11647-11803)
scaffold0336 (17-149)||(11451-11583)
[»] scaffold0143 (4 HSPs)
scaffold0143 (24-186)||(29185-29351)
scaffold0143 (216-351)||(29377-29506)
scaffold0143 (303-370)||(7141-7208)
scaffold0143 (217-288)||(7049-7120)
[»] scaffold0320 (1 HSPs)
scaffold0320 (216-288)||(20293-20364)
[»] scaffold0322 (1 HSPs)
scaffold0322 (302-370)||(8209-8277)


Alignment Details
Target: chr5 (Bit Score: 153; Significance: 5e-81; HSPs: 109)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 9547975 - 9547799
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaa-taaccatcctctcgctctgcccgaagc 109  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  9547975 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 9547876  T
Q  110 gaaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9547875 gacagtgatattttctgtaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 9547799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 29888472 - 29888298
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29888472 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgtccgaagcg 29888373  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29888372 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 29888298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 33878019 - 33878193
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33878019 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 33878118  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  33878119 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgac 33878193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 25200923 - 25201092
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  25200923 cattccttcaatcatgcatgtttcccagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgacagtg 25201022  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  25201023 atattttctgtaagggcatgtttgtttcggcatcgccgttattaataaaaattgtcgtttctttcacgac 25201092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 25265078 - 25265247
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  25265078 cattccttcaatcatgcatgtttcccagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgacagtg 25265177  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  25265178 atattttctgtaagggcatgtttgtttcggcatcgccgttattaataaaaattgtcgtttctttcacgac 25265247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 13184081 - 13183905
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaa-taaccatcctctcgctctgcccgaagc 109  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  13184081 catcatcattccttcaatcatgcatatttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 13183982  T
Q  110 gaaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    || |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  13183981 gacagtgatattttctgcaagggcatgtttgtttcggcatcgccgttattaataaaaattgtcgtttctttcacgac 13183905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 22890363 - 22890533
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaa-taaccatcctctcgctctgcccgaagcgaaagt 115  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  22890363 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctaaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagcgaaagt 22890462  T
Q  116 gatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  22890463 gatattttctgtaagggcatgtttgtttcggcatcgccgttattaataaaaatcgttgtttctttcacgac 22890533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 11326524 - 11326700
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaa-taaccatcctctcgctctgcccgaagc 109  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||| ||||||||||||||||||    
T  11326524 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataataatcttctcgctctgcccgaagc 11326623  T
Q  110 gaaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    || |||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  11326624 gacagtgatattttctgtaagggcatgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgac 11326700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 24 - 184
Target Start/End: Original strand, 23894107 - 23894267
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtgatatttt 123  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  23894107 tcaatcatgcatgtttctgagtaatatgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgagagtgatatttt 23894206  T
Q  124 ctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacg 184  Q
    ||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  23894207 ctgtaagggcatgtttgtttcggcatcgccgttattaataaaaattgtcgtttctttcacg 23894267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 13439926 - 13439757
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttc-aaaataaccatcctctcgctctgcccgaagc 109  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  13439926 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 13439827  T
Q  110 gaaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    || |||||||||||||| |||||||||||||||||||||||||||       ||||||| |||||||||||||||||    
T  13439826 gacagtgatattttctgtaagggcatgtttgtttcggcatcgccg-------taaaaattgtcgtttctttcacgac 13439757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 41676603 - 41676772
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||||||||| |||||||||||    
T  41676603 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgaaagtg 41676701  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaatcgtcgtttctttcacgac 186  Q
    |||||||||| |||||||||||||||||||||| |||||| || ||||||||| |||||||||||||||||    
T  41676702 atattttctgtaagggcatgtttgtttcggcattgccgttgatgaataaaaattgtcgtttctttcacgac 41676772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 2512945 - 2513115
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||| || | ||||||||  |||||||| |||||||||||||||||||||||| | ||    
T  2512945 cattccttcaatcatgcatgtttccgagtaatgcgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccgaagcgacaatg 2513044  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaatcgtcgtttctttcacgac 186  Q
    |||||||||| |||||| ||||||||||||||| |||||| || ||||||||| |||||||||||||||||    
T  2513045 atattttctgtaagggcgtgtttgtttcggcattgccgttgattaataaaaattgtcgtttctttcacgac 2513115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 9319345 - 9319516
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||| || | ||||||||  |||||||| ||||||||||||||||| |||||| ||||    
T  9319345 cattccttcaatcatgcatgtttccgagtaatgcgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 9319444  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt--atcaataaaaatcgtcgtttctttcacgac 186  Q
    |||||||||| |||||| ||||||||||||||| ||||||  || ||||||||| |||||||||||||||||    
T  9319445 atattttctgtaagggcgtgtttgtttcggcattgccgtttgatgaataaaaattgtcgtttctttcacgac 9319516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 12134049 - 12134220
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||| || | ||||||||  |||||||| ||||||||||||||||| |||||| ||||    
T  12134049 cattccttcaatcatgcatgtttccgagtaatgcgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 12134148  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt--atcaataaaaatcgtcgtttctttcacgac 186  Q
    |||||||||| |||||| ||||||||||||||| ||||||  || ||||||||| |||||||||||||||||    
T  12134149 atattttctgtaagggcgtgtttgtttcggcattgccgtttgatgaataaaaattgtcgtttctttcacgac 12134220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 30170363 - 30170534
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||| || | ||||||||  |||||||| ||||||||||||||||| |||||| ||||    
T  30170363 cattccttcaatcatgcatgtttccgagtaatgcgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 30170462  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt--atcaataaaaatcgtcgtttctttcacgac 186  Q
    |||||||||| |||||| ||||||||||||||| ||||||  || ||||||||| |||||||||||||||||    
T  30170463 atattttctgtaagggcgtgtttgtttcggcattgccgtttgatgaataaaaattgtcgtttctttcacgac 30170534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 3791435 - 3791573
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||||||||| |||||||||||    
T  3791435 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgaaagtg 3791533  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  3791534 atattttctgtaagggcatgtttgtttcggcattgccgtt 3791573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 28958054 - 28957884
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  28958054 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 28957956  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgac 186  Q
    |||||| ||| |||||||||||||||||||||| |||||| || |||||||  | |||||||||||||||||    
T  28957955 atatttcctgtaagggcatgtttgtttcggcattgccgttgattaataaaattttgtcgtttctttcacgac 28957884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 37669751 - 37669613
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  37669751 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 37669653  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  37669652 atattttctgtaagggcatgtttgtttcggcattgccgtt 37669613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 37756874 - 37757012
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  37756874 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 37756972  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  37756973 atattttctgtaagggcatgtttgtttcggcattgccgtt 37757012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 3791628 - 3791780
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  3791628 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaatcat 3791725  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  3791726 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 3791780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 37757070 - 37757222
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  37757070 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaatcat 37757167  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  37757168 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 37757222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 8663743 - 8663605
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  8663743 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 8663645  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  8663644 atattttctgtaagggcatgtttgtttcggcattgccgtt 8663605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 18373803 - 18373665
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  18373803 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 18373705  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  18373704 atattttctgtaagggcatgtttgtttcggcattgccgtt 18373665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 24683334 - 24683472
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  24683334 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 24683432  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  24683433 atattttctgtaagggcatgtttgtttcggcattgccgtt 24683472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 24725861 - 24725999
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  24725861 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 24725959  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  24725960 atattttctgtaagggcatgtttgtttcggcattgccgtt 24725999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 30031309 - 30031447
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  30031309 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 30031407  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  30031408 atattttctgtaagggcatgtttgtttcggcattgccgtt 30031447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 30153912 - 30154050
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  30153912 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 30154010  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  30154011 atattttctgtaagggcatgtttgtttcggcattgccgtt 30154050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 32594542 - 32594404
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  32594542 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 32594444  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  32594443 atattttctgtaagggcatgtttgtttcggcattgccgtt 32594404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 34618412 - 34618550
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  34618412 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgatttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 34618510  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  34618511 atattttctgtaagggcatgtttgtttcggcattgccgtt 34618550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 37356911 - 37356773
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  37356911 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 37356813  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||| ||| ||||||    
T  37356812 atattttctgtaagggcatgtttgtttcgacattgccgtt 37356773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 37769255 - 37769117
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  37769255 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 37769157  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  37769156 atattttctgtaagggcatgtttgtttcggcattgccgtt 37769117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 40471817 - 40471679
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||  |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  40471817 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtactttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 40471719  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  40471718 atattttctgtaagggcatgtttgtttcggcattgccgtt 40471679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 43080146 - 43080284
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  43080146 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 43080244  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  43080245 atattttctgtaagggcatgtttgtttcggcattgccgtt 43080284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 26482285 - 26482457
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||| || | ||||||||  |||||||| ||||||||| ||||||| |||||| ||||    
T  26482285 cattccttcaatcatgcatgtttccgagtaatgcgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgttctgcccaaagcgagagtg 26482384  T
Q  117 ata-ttttctggaagggcatgtttgtttcggcatcgccgtt--atcaataaaaatcgtcgtttctttcacgac 186  Q
    ||| ||||||| |||||| ||||||||||||||| ||||||  || ||||||||| |||||||||||||||||    
T  26482385 atatttttctgtaagggcgtgtttgtttcggcattgccgtttgatgaataaaaattgtcgtttctttcacgac 26482457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 33779388 - 33779553
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||    
T  33779388 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 33779487  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgac 186  Q
    |||| |||||||||||||||||||||| |||||| || ||| |||||| |||||||||||||||||    
T  33779488 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaattgtcgtttctttcacgac 33779553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 23716249 - 23716117
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtgatatttt 123  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||||||||||||| ||||||||||||||||| |||||| |||||||||||    
T  23716249 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 23716150  T
Q  124 ctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    ||| |||||||||||||||||||||| ||||||    
T  23716149 ctgtaagggcatgtttgtttcggcattgccgtt 23716117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 17 - 149
Target Start/End: Original strand, 28651129 - 28651260
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  28651129 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 28651227  T
Q  117 atattttctggaagggcatgtttgtttcggcat 149  Q
    |||||||||| ||||||||||||||||||||||    
T  28651228 atattttctgtaagggcatgtttgtttcggcat 28651260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 32594349 - 32594195
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn--ctctttctaaaatc 313  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||            ||||||||||||||    
T  32594349 cttggaaataatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaactctttctaaaatc 32594252  T
Q  314 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  32594251 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 32594195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 34618606 - 34618757
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  34618606 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaa-ctctttctaaaatcat 34618702  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  34618703 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 34618757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 37769061 - 37768912
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  37769061 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaa---ctctttctaaaatcat 37768967  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  37768966 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 37768912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 40471622 - 40471471
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  40471622 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaa-ctctttctaaaatcat 40471526  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  40471525 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 40471471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 15757125 - 15756986
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||| ||||||||||| ||||||||||||||||||||| | || ||||||||  |||||||| ||||||||||||||||| |||||| ||||    
T  15757125 cattccttcaataatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 15757026  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  15757025 atattttctgtaagggcatgtttgtttcggcattgccgtt 15756986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 31433334 - 31433472
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| ||||||  |||    
T  31433334 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagggtg 31433432  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  31433433 atattttctgtaagggcatgtttgtttcggcattgccgtt 31433472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 8663549 - 8663396
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn-ctctttctaaaatca 314  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||           |||||||||||||||    
T  8663549 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaaatca 8663452  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  8663451 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 8663396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 216 - 367
Target Start/End: Complemental strand, 13322902 - 13322754
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  13322902 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaa-ctctttctaaaatcat 13322806  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatc 367  Q
    | ||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  13322805 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatc 13322754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 216 - 367
Target Start/End: Original strand, 31433552 - 31433700
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  31433552 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaa-ctctttctaaaatcat 31433648  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatc 367  Q
    | ||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  31433649 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatc 31433700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 15657021 - 15656857
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtgatatttt 123  Q
    ||||||||||||||||| ||||||| |  |||||||||| |||   ||||||||||||||||| ||||||||||||||||| |||||| |||||||||||    
T  15657021 tcaatcatgcatgtttctgagtaatataccttgttgcttgagtaccttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 15656922  T
Q  124 ctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgac 186  Q
    ||| |||||||||||||||||||||| |||||| || ||| |||||| |||||||| ||||||||    
T  15656921 ctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaattgtcgtttccttcacgac 15656857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 30170558 - 30170708
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  30170558 cttggaaa-aatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaa-ctctttctaaaatcat 30170653  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  30170654 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 30170708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 13323097 - 13322959
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| ||||||  |||    
T  13323097 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagggtg 13322999  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||| | ||||||    
T  13322998 atattttctgtaagggcatgtttgtttcggcgttgccgtt 13322959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 18498998 - 18498860
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| |||||||| |||||||| |||||| ||||    
T  18498998 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcactctgcccaaagcgagagtg 18498900  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
     ||||||||| || ||||||||||||||||||| ||||||    
T  18498899 gtattttctgtaaaggcatgtttgtttcggcattgccgtt 18498860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 22997375 - 22997209
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||| ||||||||| ||||||||||||||||| |||||| ||||||||||    
T  22997375 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 22997276  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgac 186  Q
    |||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| ||||||    
T  22997275 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgac 22997209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 31824675 - 31824537
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||| ||||||||||||||| | || || ||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  31824675 cattccttcaatcatgcatgtttctgagtagtgtgtcttgttgctttaatgcttcgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 31824577  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  31824576 atattttctgtaagggcatgtttgtttcggcattgccgtt 31824537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 33518250 - 33518388
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| ||||||||||||||||||  |||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  33518250 cattccttcaatcatgcatgtttctaagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 33518348  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||| ||| ||||||    
T  33518349 atattttctgtaagggcatgtttgtttcgacattgccgtt 33518388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 43080339 - 43080494
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn---ctctttctaaaat 312  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||             |||||||||||||    
T  43080339 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatggaaaaaaaacaaactctttctaaaat 43080436  T
Q  313 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  43080437 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 43080494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 5639681 - 5639817
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| ||||||||||||||||||  |||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| ||| || ||||    
T  5639681 cattccttcaatcatgcatgtttctaagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagtgagagtg 5639779  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccg 154  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  5639780 atattttctgtaagggcatgtttgtttcggcattgccg 5639817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 24686418 - 24686251
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||| ||||||||| ||||||||||||||||| |||||| ||||||||||    
T  24686418 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 24686319  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa---tcgtcgtttctttcacgac 186  Q
    |||| ||||||| |||||||||||||| |||||| || ||||||||   | |||||||||||||||||    
T  24686318 tctgtaagggcacgtttgtttcggcattgccgttgattaataaaaaattttgtcgtttctttcacgac 24686251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 6876206 - 6876337
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtgatatttt 123  Q
    ||||||||||||||||| ||||||||||||||||||||| |||  |||||||| ||||||||| ||||||||||||||||| ||||||  ||| ||||||    
T  6876206 tcaatcatgcatgtttctgagtaatgtgtcttgttgctttagttctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagggtggtatttt 6876304  T
Q  124 ctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    ||| |||||||||||||||||||||| ||||||    
T  6876305 ctgtaagggcatgtttgtttcggcattgccgtt 6876337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 15756927 - 15756773
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn--ctctttctaaaatc 313  Q
    |||||||| ||||||||| |||||||||||||||| |||||||||||  |||||||||||||||||||||||||            ||||||||||||||    
T  15756927 cttggaaacaatggtaatgccagaaaaaaccaaaatgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaactctttctaaaatc 15756830  T
Q  314 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  15756829 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 15756773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 216 - 369
Target Start/End: Complemental strand, 18373607 - 18373456
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttct-aaaatca 314  Q
    |||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||          |||||||| |||||||    
T  18373607 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatg-aaaaaaaaactctttctaaaaatca 18373511  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 369  Q
    || ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  18373510 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 18373456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 24726057 - 24726208
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||           || |||||||||||||    
T  24726057 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-tttttcttattaatttcaaaaatctgcat--aaaaagaaactatttctaaaatcat 24726153  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | |||||||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  24726154 ccaatcattatatgcaggctgaaccataataaacccgttgaacacagtaatccta 24726208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 28651325 - 28651481
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn----ctctttctaaaa 311  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||              ||||||||||||    
T  28651325 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaaaactctttctaaaa 28651422  T
Q  312 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  28651423 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 28651481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 31824482 - 31824328
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn--ctctttctaaaatc 313  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||             ||||||||||||||    
T  31824482 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcataaaaaaaaaaaaactctttctaaaatc 31824385  T
Q  314 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  31824384 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 31824328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 216 - 369
Target Start/End: Original strand, 5639876 - 5640026
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||| | ||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  5639876 cttggaaacaatggtaatgccagaaaaaaccaaaacatttgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaa-ctctttctaaaatcat 5639972  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 369  Q
    | ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  5639973 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 5640026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 18498801 - 18498646
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn---ctctttctaaaat 312  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||             | |||||||||||    
T  18498801 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaactccctttctaaaat 18498704  T
Q  313 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  18498703 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 18498646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 6876392 - 6876544
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaa-ccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatca 314  Q
    |||||||| ||||||||| |||||||||| ||||||||||||||||||  |||||||||||||||||||||||||          |||||||||||||||    
T  6876392 cttggaaacaatggtaatgccagaaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaa-ctctttctaaaatca 6876488  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    || ||||||||||||||| ||||||||||| |||||| ||||||||||||||||||    
T  6876489 tccaatcattatatgcaggttgaaccataacaaacccgttgaacacagtaatccta 6876544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 18125656 - 18125489
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt--caaaataaccatcctctcgctctgcccgaagcgaaagtgatatt 121  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||||  ||||||||| ||||||| ||||||||| |||||| |||||||||    
T  18125656 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttttcaaaataacaatcctcttgctctgcccaaagcgagagtgatatt 18125557  T
Q  122 ttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgac 186  Q
    ||||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| ||||||    
T  18125556 ttctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgac 18125489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 24971919 - 24972052
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||    
T  24971919 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 24972018  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||| ||||||| |||||||||||||| ||||||    
T  24972019 tctgtaagggcacgtttgtttcggcattgccgtt 24972052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 37356715 - 37356564
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaa-tca 314  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||| ||||||||          |||||||||||| |||    
T  37356715 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaagtctgcatgaaaaaaaa--ctctttctaaaaatca 37356620  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  37356619 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 37356564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 37669557 - 37669407
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaa-ccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatca 314  Q
    |||||||| ||||||||| |||||||||| ||||||||||||||||||  |||||||||||||||||||||||||          |||||||||||||||    
T  37669557 cttggaaacaatggtaatgccagaaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaa---ctctttctaaaatca 37669463  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    || ||||| ||||||||| |||||||||||||||||| ||||||||||||||||||    
T  37669462 tccaatcagtatatgcaggttgaaccataataaacccgttgaacacagtaatccta 37669407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 28957860 - 28957706
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-nnnnnnnnnnctctttct-aaaatc 313  Q
    |||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||           |||||||| ||||||    
T  28957860 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaaaatc 28957763  T
Q  314 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||| ||||||||||||||| ||||||||||| |||||| ||||||||||||||||||    
T  28957762 atccaatcattatatgcaggttgaaccataacaaacccgttgaacacagtaatccta 28957706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 33294426 - 33294592
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||| |||||||||||||| || |||||| ||||||||||    
T  33294426 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgtccaaagcgagagtgatattt 33294525  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgac 186  Q
     ||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| ||||||    
T  33294526 gctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgac 33294592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 24683529 - 24683681
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaa-cgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatca 314  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||           || ||||||||||||    
T  24683529 cttggaaacaatggtaatgccagaaaaaaccaaaaacgtctgtattttt-cttattaatttcaaaaatctgcat--aaaaagaaactatttctaaaatca 24683625  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    || |||||||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  24683626 tccaatcattatatgcaggctgaaccataataaacccgttgaacacagtaatccta 24683681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 30936534 - 30936701
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt--tcaaaataaccatcctctcgctctgcccgaagcgaaagtgatatt 121  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||  |||||||||| | |||| |||||||||| |||||| |||||||||    
T  30936534 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttttcaaaataacaaacctcccgctctgcccaaagcgagagtgatatt 30936633  T
Q  122 ttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgac 186  Q
    ||||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| ||||||    
T  30936634 ttctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgac 30936701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 13439737 - 13439588
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||           || |||||||||||||    
T  13439737 cttggaaataatggtaatgccagaaaaaaccaaaacatctgtat-ttttcttattaatttcaaaaatctgcat----aaaaaccctttttctaaaatcat 13439643  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
      || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  13439642 tcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 13439588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 216 - 373
Target Start/End: Original strand, 26482480 - 26482636
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn-ctctttctaaaa-tc 313  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||           |||||||||||| ||    
T  26482480 cttggaaa-aatggtaatgccagaaaaaaccaaaacgtttgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaaaatc 26482576  T
Q  314 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatgc 373  Q
    ||| ||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||    
T  26482577 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaattctatgc 26482636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 11551255 - 11551392
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttc-----aaaataaccatcctctcgctctgcccgaagcgaaagtgat 118  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||||      |||||||| ||||||||||||||||| |||||| ||||||    
T  11551255 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttttttcaaaaataacaatcctctcgctctgcccaaagcgagagtgat 11551354  T
Q  119 attttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||| |||||||||||||||||||||| ||||||    
T  11551355 attttctgtaagggcatgtttgtttcggcattgccgtt 11551392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 216 - 369
Target Start/End: Complemental strand, 15656829 - 15656680
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||           ||||||||||||||||    
T  15656829 cttggaaacaatggtaatgccagaaaaaaccaaaacatctgtattttttcttattaatttcaaaaatctgcat----aaaaaccctctttctaaaatcat 15656734  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 369  Q
    | || |||| || ||||||||||| ||||| ||||| |||  ||||||||||||    
T  15656733 ccaaccattttacgcagattgaactataatgaacccgttgggcacagtaatcct 15656680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 216 - 365
Target Start/End: Complemental strand, 22997186 - 22997043
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||           ||| ||||||||||||    
T  22997186 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat----aaaaaacctccttctaaaatcat 22997093  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    ||||||||| || ||||||||||| ||||||||||| |||  ||||||||    
T  22997092 ctaatcattttacgcagattgaactataataaacccgttgggcacagtaa 22997043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 33518461 - 33518619
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg------nnnnnnnnnnctctttctaa 309  Q
    |||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||                |  |||||||    
T  33518461 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaccattttctaa 33518558  T
Q  310 aatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||||| ||||||||||||||| |||||||||||||||||| |||||||||||| |||||    
T  33518559 aatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtagtccta 33518619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 216 - 372
Target Start/End: Complemental strand, 18125469 - 18125319
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    ||||||||| |||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||           |  |||||||||||||    
T  18125469 cttggaaatgatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat----aaaaacccattttctaaaatcat 18125376  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatg 372  Q
      ||||||| ||||||  |||||||||||||||||| ||||||||||||||||||||    
T  18125375 tcaatcattctatgcaatttgaaccataataaacccgttgaacacagtaatcctatg 18125319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 216 - 369
Target Start/End: Original strand, 33294618 - 33294766
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| |||||| ||||||||||| |||||||||||||||||           ||||||||||||||||    
T  33294618 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta-tttttcttattgatttcaaaaatctgcat----aaaaaccctctttctaaaatcat 33294712  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 369  Q
    | ||||||| || ||||||||||| ||||| ||||| |||  ||||||||||||    
T  33294713 ccaatcattttacgcagattgaactataatgaacccgttgggcacagtaatcct 33294766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 216 - 369
Target Start/End: Original strand, 33779579 - 33779727
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||           ||||||||||||||||    
T  33779579 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta-tttttcttattaatttcaaaaatctgcat----aaaaaccctctttctaaaatcat 33779673  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 369  Q
    | || |||| || ||||||||||| ||||| ||||| |||  ||||||||||||    
T  33779674 ccaaccattttacgcagattgaactataatgaacccgttgggcacagtaatcct 33779727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 41676794 - 41676944
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaa-ccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatca 314  Q
    |||||||| ||||||||| |||||||||| ||||||| |||||||||| |||||||||||||||||||||||||           |||||||||||||||    
T  41676794 cttggaaaaaatggtaatgccagaaaaaaaccaaaacatctgtatttt-tcttattaatttcaaaaatctgcat----aaaaaccctctttctaaaatca 41676888  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    || || |||| || ||||||||||| ||||| ||||| ||||||||||||||||||    
T  41676889 tccaaccattttacgcagattgaactataatgaacccgttgaacacagtaatccta 41676944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 216 - 369
Target Start/End: Original strand, 23628060 - 23628207
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||||||||||| |||||           ||||||||||||||||    
T  23628060 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatatgcat----aaaaaccctctttctaaaatcat 23628153  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 369  Q
    | || |||| || ||||||||||| ||||||||||| |||  ||||||||||||    
T  23628154 ccaaccattttacgcagattgaactataataaacccgttgggcacagtaatcct 23628207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 216 - 365
Target Start/End: Complemental strand, 24686215 - 24686071
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||           ||||||||||||||||    
T  24686215 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat---aaaaaaccctctttctaaaatcat 24686121  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  24686120 ccaaccattttacgcagattgaactataataaacccgttgggcacagtaa 24686071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 30031503 - 30031667
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaa---ccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn---------ctct 303  Q
    |||||||| ||||||||| ||||||||||   ||||||||||||||||||  |||||||||||||||||||||||||                   ||||    
T  30031503 cttggaaacaatggtaatgccagaaaaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaaaaactct 30031600  T
Q  304 ttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  30031601 ttctaaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 30031667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 369
Target Start/End: Original strand, 2513231 - 2513300
Alignment:
Q  300 ctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 369  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  2513231 ctctttctaaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 2513300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 373
Target Start/End: Original strand, 9319645 - 9319718
Alignment:
Q  300 ctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatgc 373  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||    
T  9319645 ctctttctaaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaattctatgc 9319718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 373
Target Start/End: Original strand, 12134344 - 12134417
Alignment:
Q  300 ctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatgc 373  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||    
T  12134344 ctctttctaaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaattctatgc 12134417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 30154106 - 30154270
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg------------nnnnnnnnnnctct 303  Q
    |||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||                      ||||    
T  30154106 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaaaaaaaactct 30154203  T
Q  304 ttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||| |||||||| || |||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  30154204 ttcttaaatcatccaaccattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 30154270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 365
Target Start/End: Original strand, 30936726 - 30936870
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||           ||||||||||||||||    
T  30936726 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat---aaaaaaacctctttctaaaatcat 30936820  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | || |||| || ||||||||||| ||||| ||||| |||  ||||||||    
T  30936821 ccaaccattttacgcagattgaactataatgaacccgttgggcacagtaa 30936870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 216 - 367
Target Start/End: Complemental strand, 29888260 - 29888105
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-----nnnnnnnnnnctctttctaaa 310  Q
    |||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||| |||||||||               |  ||||||||    
T  29888260 cttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttattaatttcaaagatctgcatgaaagaaaaaaaaaacccttttctaaa 29888162  T
Q  311 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatc 367  Q
    |||||  || |||| ||||||| |||||||||||||||||| |||||||||||||||    
T  29888161 atcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatc 29888105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 22890556 - 22890627
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 288  Q
    |||||||||||||||||| ||||||||||||||||| ||| || |||||||||||||||||||||||||||||    
T  22890556 cttggaaataatggtaatgccagaaaaaaccaaaacatcttta-tttttcttattaatttcaaaaatctgcat 22890627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #94
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 2513136 - 2513206
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 288  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  2513136 cttggaaaaaatggtaatgccagaaaaaaccaaaacgtttgta--ttttcttattaatttcaaaaatctgcat 2513206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #95
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 216 - 288
Target Start/End: Complemental strand, 13183866 - 13183795
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 288  Q
    |||||||||||||||||| ||||||||||||||||| ||| || |||||||||||||||||||| ||||||||    
T  13183866 cttggaaataatggtaatgccagaaaaaaccaaaacatcttta-tttttcttattaatttcaaagatctgcat 13183795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #96
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 33878228 - 33878386
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat----gnnnnnnnnnnctc-tttctaaa 310  Q
    |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    |          | | ||||||||    
T  33878228 cttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaagaaaaaaaaaacccttttctaaa 33878326  T
Q  311 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  33878327 atcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 33878386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #97
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 9319542 - 9319612
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg 289  Q
    |||||||| ||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||| |||||||    
T  9319542 cttggaaa-aatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaacctgcatg 9319612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #98
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 12134244 - 12134314
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg 289  Q
    |||||||| ||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||| |||||||    
T  12134244 cttggaaa-aatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaacctgcatg 12134314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #99
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 281
Target Start/End: Original strand, 23894292 - 23894355
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaa 281  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||||||||||    
T  23894292 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaa 23894355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #100
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 9547773 - 9547614
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttatta---atttcaaaaatctgcatgnnnnnnnnnnctc--tttctaaa 310  Q
    |||||||||||||||||| | ||||||||||||||| ||| |||||||| ||||||   |||||||| ||||||||             |  ||||||||    
T  9547773 cttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttttttattattaatttcaaagatctgcataaaagaaaaaatcccttttctaaa 9547674  T
Q  311 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||| || |||| ||||||| |||||||||||||||||| || |||||||||||||||    
T  9547673 atcatccaaccattctatgcagtttgaaccataataaacccgttaaacacagtaatccta 9547614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #101
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 11326730 - 11326801
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 288  Q
    |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    
T  11326730 cttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcat 11326801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #102
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 365
Target Start/End: Original strand, 11551447 - 11551589
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| |||||||||||||||||  | |||  |||||||||||||||| |||||||||||           ||||||||||||||||    
T  11551447 cttggaaataatggtaatgccagaaaaaaccaaaacacccgta--ttttcttattaatttc-aaaatctgcat----aaaaaacctctttctaaaatcat 11551539  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  11551540 ccaaccattttacgcagattgaactataataaacccgttgggcacagtaa 11551589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #103
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 25201122 - 25201271
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaattt--caaaaatctgcatgnnnnnnnnnnctctttctaaaatc 313  Q
    |||||||||||||||||| ||||||||||||||||  ||||||  |||||||||||||||   ||||||||||||           ||||||||||||||    
T  25201122 cttggaaataatggtaatgccagaaaaaaccaaaatatctgta--ttttcttattaatttaaaaaaaatctgcat-----aaaaacctctttctaaaatc 25201214  T
Q  314 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||| || |||| |||||||||||| | ||||||||||| |||  |||||||| ||||    
T  25201215 atccaaccattttatgcagattgagctataataaacccgttgggcacagtaacccta 25201271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #104
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 25265277 - 25265426
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaattt--caaaaatctgcatgnnnnnnnnnnctctttctaaaatc 313  Q
    |||||||||||||||||| ||||||||||||||||  ||||||  |||||||||||||||   ||||||||||||           ||||||||||||||    
T  25265277 cttggaaataatggtaatgccagaaaaaaccaaaatatctgta--ttttcttattaatttaaaaaaaatctgcat-----aaaaacctctttctaaaatc 25265369  T
Q  314 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||| || |||| |||||||||||| | ||||||||||| |||  |||||||| ||||    
T  25265370 atccaaccattttatgcagattgagctataataaacccgttgggcacagtaacccta 25265426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #105
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 303 - 370
Target Start/End: Original strand, 11326825 - 11326892
Alignment:
Q  303 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  11326825 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 11326892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #106
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 303 - 370
Target Start/End: Complemental strand, 13183764 - 13183697
Alignment:
Q  303 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  13183764 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 13183697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #107
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 365
Target Start/End: Original strand, 24972075 - 24972140
Alignment:
Q  300 ctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    ||||||||||||||||| || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  24972075 ctctttctaaaatcatccaaccattttacgcagattgaactataataaacccgttgggcacagtaa 24972140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #108
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 23750711 - 23750653
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaa 82  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||| ||||    
T  23750711 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttaaaa 23750653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #109
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 370
Target Start/End: Original strand, 23894375 - 23894445
Alignment:
Q  300 ctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||||||||||||||| || |||| || ||||||||| |||||||||| || |||  |||||||| ||||    
T  23894375 ctctttctaaaatcatccaaccattttacgcagattgagccataataaatccgttgggcacagtaacccta 23894445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 152; Significance: 2e-80; HSPs: 97)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 26788703 - 26788877
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26788703 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 26788802  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26788803 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttatcaacaaaaatcgtcgtttctttcacgac 26788877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 27197076 - 27197250
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27197076 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 27197175  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27197176 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttatcaacaaaaatcgtcgtttctttcacgac 27197250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 27252164 - 27251990
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27252164 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 27252065  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27252064 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttatcaacaaaaatcgtcgtttctttcacgac 27251990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 13521509 - 13521335
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13521509 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 13521410  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  13521409 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgac 13521335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 27359427 - 27359253
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27359427 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 27359328  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  27359327 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgac 27359253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 27449770 - 27449596
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27449770 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 27449671  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  27449670 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgac 27449596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 14142721 - 14142547
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14142721 catcaacattcattcaatcatgcatgtttccgaataatgcgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 14142622  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  14142621 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgac 14142547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 28163375 - 28163552
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaa--taaccatcctctcgctctgcccgaag 108  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||    
T  28163375 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaaataacaatcctctcgctctgcccgaag 28163474  T
Q  109 cgaaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  28163475 cgacagtgatattttctgtaagggcatgtttgtttcggcatcgccgttattaataaaaattgtcgtttctttcacgac 28163552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 8891789 - 8891614
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttc-aaaataaccatcctctcgctctgcccgaagc 109  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  8891789 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 8891690  T
Q  110 gaaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  8891689 gaaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgac 8891614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 8903024 - 8902849
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttc-aaaataaccatcctctcgctctgcccgaagc 109  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  8903024 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 8902925  T
Q  110 gaaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  8902924 gaaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgac 8902849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 22456418 - 22456249
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||| ||||  |||||||||||||    
T  22456418 cattcattcaatcatgcatgtttccgagtaatatgtcttgttgctaaagtgttttgtttttcaaaataacaatcctctcgttctgttcgaagcgaaagtg 22456319  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    |||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  22456318 atattttctgtaagggcatgtttgtttcggcatcgccgtttttaataaaaatcgtcgtttctttcacgac 22456249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 33373734 - 33373556
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttc-aaaataaccatcctctcgctctgcccgaagc 109  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  33373734 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 33373635  T
Q  110 gaaagtgatattttctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgac 186  Q
    || |||||||||||||| |||||||||||||||||||||| ||||||  | ||| |||||| |||||||||||||||||    
T  33373634 gacagtgatattttctgtaagggcatgtttgtttcggcattgccgttggttaataaaaaattgtcgtttctttcacgac 33373556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 27288684 - 27288512
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||| ||||||||||||||||| |||||| ||||    
T  27288684 cattccttcaatcatgcatgtttccgagtaatatgtcttgttgctttagtgctttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtg 27288585  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaat--aaaaatcgtcgtttctttcacgac 186  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||  |||||| |||||||||||||||||    
T  27288584 atattttctgtaagggcatgtttgtttcggcattgccgttgatgaataaaaaaattgtcgtttctttcacgac 27288512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 27270894 - 27270725
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||| |||  |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  27270894 cattccttcaatcatgcatgtttccgagtaatgcgtcttgttgctttagtactttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 27270796  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||| || |||||||||||||||||||||| |||||| || ||||||||| |||||||||||||||||    
T  27270795 atattttatgtaagggcatgtttgtttcggcattgccgttgatgaataaaaattgtcgtttctttcacgac 27270725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 27628020 - 27627851
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||| |||  |||||||| ||||||||| ||||||||||||||||| |||||||||||    
T  27628020 cattccttcaatcatgcatgtttccgagtaatgcgtcttgttgctttagtactttgtttt-caaaataacaatcctctcgctctgcccaaagcgaaagtg 27627922  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaatcgtcgtttctttcacgac 186  Q
    |||||||||| ||||||  |||||||||||||| |||||| || ||||||||| |||||||||||||||||    
T  27627921 atattttctgtaagggcgcgtttgtttcggcattgccgttgatgaataaaaattgtcgtttctttcacgac 27627851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 17090760 - 17090593
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||| ||||| ||||||||||| |||||||||||    
T  17090760 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgcttaaatgtt--gtttttcaaaataacgatcctttcgctctgcccaaagcgaaagtg 17090663  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgttatcaata--aaaatcgtcgtttctttcacg 184  Q
    | ||| |||| ||||||||||||||||||||||  || |||||||||  |||||||||||||||||||||    
T  17090662 agattatctgtaagggcatgtttgtttcggcattcccattatcaataaaaaaatcgtcgtttctttcacg 17090593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 29575091 - 29575243
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||          ||||||||||||||||    
T  29575091 cttggaaataatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaatcat 29575188  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  29575189 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 29575243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 4544089 - 4543951
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  4544089 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 4543991  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  4543990 atattttctgtaagggcatgtttgtttcggcattgccgtt 4543951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 26114724 - 26114586
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  26114724 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 26114626  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  26114625 atattttctgtaagggcatgtttgtttcggcattgccgtt 26114586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 26775924 - 26775786
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  26775924 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 26775826  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  26775825 atattttctgtaagggcatgtttgtttcggcattgccgtt 26775786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 27046270 - 27046408
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  27046270 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 27046368  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  27046369 atattttctgtaagggcatgtttgtttcggcattgccgtt 27046408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 27487011 - 27487149
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  27487011 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 27487109  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  27487110 atattttctgtaagggcatgtttgtttcggcattgccgtt 27487149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 28209336 - 28209475
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| ||||||||  |||||||| ||||||||||||||||| |||||| ||||    
T  28209336 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 28209435  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  28209436 atattttctgtaagggcatgtttgtttcggcattgccgtt 28209475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 16942146 - 16941994
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  16942146 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatggaaaaaaaaactctttctaaaatcat 16942049  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  16942048 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 16941994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 27046464 - 27046616
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  27046464 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaatcat 27046561  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  27046562 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 27046616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 3698161 - 3698312
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  3698161 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaa-ctctttctaaaatcat 3698257  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3698258 ccaatcattatatgcaggttgaaccataataaacccattgaacacagtaatccta 3698312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 3697963 - 3698101
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  3697963 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 3698061  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  3698062 atattttctgtaagggcatgtttgtttcggcattgccgtt 3698101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 4527168 - 4527306
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||  |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  4527168 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtactttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 4527266  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  4527267 atattttctgtaagggcatgtttgtttcggcattgccgtt 4527306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 4722448 - 4722310
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| |||| |||||||||||| |||||| ||||    
T  4722448 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcccctcgctctgcccaaagcgagagtg 4722350  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  4722349 atattttctgtaagggcatgtttgtttcggcattgccgtt 4722310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 4774765 - 4774903
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| |||||||||||||| || |||||| ||||    
T  4774765 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgtccaaagcgagagtg 4774863  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  4774864 atattttctgtaagggcatgtttgtttcggcattgccgtt 4774903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 16676021 - 16676159
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  16676021 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 16676119  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  16676120 atattttctgtaagggcatgtttgtttcggcattgccgtt 16676159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 16942341 - 16942203
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||| || ||| |||| ||||||||| ||||||||||||||||| |||||| ||||    
T  16942341 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgcttaaatgctttatttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 16942243  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  16942242 atattttctgtaagggcatgtttgtttcggcattgccgtt 16942203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 29574895 - 29575033
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  29574895 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 29574993  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  29574994 atattttctgtaagggcatgtttgtttcggcattgccgtt 29575033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 30556330 - 30556192
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  30556330 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 30556232  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  30556231 atattttctgtaagggcatgtttgtttcggcattgccgtt 30556192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 26990780 - 26990945
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||    
T  26990780 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 26990879  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgac 186  Q
    |||| |||||||||||||||||||||| |||||| || ||| |||||| |||||||||||||||||    
T  26990880 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaattgtcgtttctttcacgac 26990945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 216 - 374
Target Start/End: Complemental strand, 27270700 - 27270547
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaa-ccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatca 314  Q
    |||||||||||||||||| |||||||||| ||||||| ||||||||||  |||||||||||||||||||||||||          |||||||||||||||    
T  27270700 cttggaaataatggtaatgccagaaaaaaaccaaaacatctgtatttt--cttattaatttcaaaaatctgcatgaaaaaa----ctctttctaaaatca 27270607  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatgct 374  Q
    || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27270606 tccaatcattatatgcaggttgaaccataataaacccattgaacacagtaatcctatgct 27270547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 4722253 - 4722102
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  4722253 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaa-ctctttctaaaatcat 4722157  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  4722156 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 4722102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 17 - 149
Target Start/End: Original strand, 4759646 - 4759777
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  4759646 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 4759744  T
Q  117 atattttctggaagggcatgtttgtttcggcat 149  Q
    |||||||||| ||||||||||||||||||||||    
T  4759745 atattttctgtaagggcatgtttgtttcggcat 4759777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 26775729 - 26775578
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  26775729 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaa-ctctttctaaaatcat 26775633  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  26775632 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 26775578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 216 - 369
Target Start/End: Complemental strand, 30556135 - 30555984
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  30556135 cttggaaacaatggtaatgccagaaaaaaccaaaacgtttgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaatcat 30556038  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 369  Q
    | ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  30556037 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 30555984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 20162505 - 20162665
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtgatatttt 123  Q
    |||||||||||||| |||||||||||||||||||||||||||| | ||  |||||||||| || ||||| || ||||  || ||| ||||||||||||||    
T  20162505 tcaatcatgcatgtgtccgagtaatgtgtcttgttgcttaagtttgtt--ttttcaaaatgacaatcctttcactctatccaaagtgaaagtgatatttt 20162602  T
Q  124 ctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||| |||| |||||||||||||||||  ||||||||||||||||| |||||||||||||||||    
T  20162603 ctgtaaggacatgtttgtttcggcattcccgttatcaataaaaattgtcgtttctttcacgac 20162665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 22170326 - 22170166
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtgatatttt 123  Q
    |||||||||||||| |||||||||||||||||||||||||||| | ||  |||||||||| || ||||| || ||||  || ||| ||||||||||||||    
T  22170326 tcaatcatgcatgtgtccgagtaatgtgtcttgttgcttaagtttgtt--ttttcaaaatgacaatcctttcactctatccaaagtgaaagtgatatttt 22170229  T
Q  124 ctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||| |||| |||||||||||||||||  ||||||||||||||||| |||||||||||||||||    
T  22170228 ctgtaaggacatgtttgtttcggcattcccgttatcaataaaaattgtcgtttctttcacgac 22170166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 27009612 - 27009750
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| | ||||||||||||||| |||||| ||||    
T  27009612 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaaccctctcgctctgcccaaagcgagagtg 27009710  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| ||||||||| |||||||||||| ||||||    
T  27009711 atattttctgtaagggcatgcttgtttcggcattgccgtt 27009750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 216 - 373
Target Start/End: Complemental strand, 27627825 - 27627672
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||| | |||||          ||||||||||||||||    
T  27627825 cttggaaataatggtaataccagaaaaaaccaaaacatctgtatttt--cttattaatttcaaaaacccgcatgaaaaaaaa--ctctttctaaaatcat 27627730  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatgc 373  Q
    | ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  27627729 ccaatcattatatgcaggttgaaccataataaacccattgaacatagtaatcctatgc 27627672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 27487209 - 27487362
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn-ctctttctaaaatca 314  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||           |||||||||||||||    
T  27487209 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaaatca 27487306  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  27487307 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 27487362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 28209530 - 28209683
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttct-aaaatca 314  Q
    |||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||          |||||||| |||||||    
T  28209530 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaaatca 28209627  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  28209628 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 28209683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 15422624 - 15422459
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||| ||||||||| ||||||||||||||||| |||||| ||||||||||    
T  15422624 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 15422525  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgac 186  Q
    |||| |||||||||||||||||||||| ||| || || ||| |||||| |||||||||||||||||    
T  15422524 tctgtaagggcatgtttgtttcggcattgccattgattaataaaaaattgtcgtttctttcacgac 15422459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 16751743 - 16751908
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||| ||| ||||||||||||| |||||| ||||||||||    
T  16751743 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcatctcgctctgcccaaagcgagagtgatattt 16751842  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgac 186  Q
    |||| |||||||||||||||||||||| |||||| || ||| |||||| |||||||||||||||||    
T  16751843 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaattgtcgtttctttcacgac 16751908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 4759841 - 4759992
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  ||||||||||| |||||||||||||          ||||||||||||||||    
T  4759841 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaattttaaaaatctgcatgaaaaaaaaa-ctctttctaaaatcat 4759937  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  4759938 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 4759992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 26114530 - 26114379
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          || |||||||||||||    
T  26114530 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaa-ctatttctaaaatcat 26114434  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  26114433 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 26114379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 29503304 - 29503435
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtgatatttt 123  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| |||||| |||||||||| ||||||  ||||||||||    
T  29503304 tcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctcccgctctgcccaaagcgagggtgatatttt 29503402  T
Q  124 ctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    ||| |||||||||||||||||||||| ||||||    
T  29503403 ctgtaagggcatgtttgtttcggcattgccgtt 29503435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 29503491 - 29503645
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn--ctctttctaaaatc 313  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||            ||||||||||||||    
T  29503491 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaactctttctaaaatc 29503588  T
Q  314 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  29503589 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 29503645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 27021028 - 27021194
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||    
T  27021028 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 27021127  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgac 186  Q
    |||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| ||||||    
T  27021128 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaatttgtcgtttcttccacgac 27021194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 4543894 - 4543741
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn-ctctttctaaaatca 314  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  ||||||| |||||||||||||||||           |||||||||||||||    
T  4543894 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattagtttcaaaaatctgcatgaaaaaaaaaagctctttctaaaatca 4543797  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  4543796 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 4543741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 29551364 - 29551529
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtgatatttt 123  Q
    ||||||||||||||||| ||||||| |  |||||||||| |||  |||||||| ||||||||| ||||||||||||||||| |||||| |||||||||||    
T  29551364 tcaatcatgcatgtttctgagtaatataccttgttgcttgagtactttgttttccaaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 29551463  T
Q  124 ctggaagggcatgtttgtttcggcatcgccgtt-atca--ataaaaatcgtcgtttctttcacgac 186  Q
    ||| |||||||||||||||||||||| |||||| || |  |||||||| |||||||| ||||||||    
T  29551464 ctgtaagggcatgtttgtttcggcattgccgttgattaatataaaaattgtcgtttccttcacgac 29551529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 4774958 - 4775109
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaa-ccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatca 314  Q
    |||||||| ||||||||| |||||||||| ||||||||||||||||||  |||||||||||||||||||||||||          |||||||||||||||    
T  4774958 cttggaaacaatggtaatgccagaaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaa--ctctttctaaaatca 4775053  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  4775054 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 4775109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 22933187 - 22933021
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||| ||||||||| ||||||||||||||||| |||||| ||||||||||    
T  22933187 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 22933088  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgac 186  Q
    |||  |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| ||||||    
T  22933087 tctataagggcatgtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgac 22933021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 23855632 - 23855466
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||| ||||||||| ||||||||||||||||| |||||| ||||||||||    
T  23855632 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 23855533  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgac 186  Q
    |||  |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| ||||||    
T  23855532 tctataagggcatgtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgac 23855466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 26920269 - 26920435
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||| ||| ||||||||||||| |||||| ||||||||||    
T  26920269 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcatctcgctctgcccaaagcgagagtgatattt 26920368  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgac 186  Q
    |||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| ||||||    
T  26920369 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgac 26920435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 16676214 - 16676369
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn---ctctttctaaaat 312  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||             |||||||||||||    
T  16676214 cttggaaacaatggtaatgccagaaaaaaccaaaacgtttgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaaactctttctaaaat 16676311  T
Q  313 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  16676312 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 16676369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 13297258 - 13297125
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||| ||||||||| ||| ||||||||||||| |||||| ||||||||||    
T  13297258 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcatctcgctctgcccaaagcgagagtgatattt 13297159  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||| |||||||||||||||||||||| ||||||    
T  13297158 tctgtaagggcatgtttgtttcggcattgccgtt 13297125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 216 - 377
Target Start/End: Complemental strand, 27288487 - 27288321
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn-------ctctttcta 308  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||  |||||||||||||||||||||||||                 |||||||||    
T  27288487 cttggaaataatggtaatgccagaaaaaaccaaaacatctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaaactctttcta 27288390  T
Q  309 aaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatgcttct 377  Q
    |||||||| ||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||    
T  27288389 aaatcatccaatcattatatgcaggttgaaccataataaaccccttgaacacagtgatcctatgcttct 27288321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 33373530 - 33373381
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||  ||||||| ||||||||||||||||||||||||||||           ||||||||||||||||    
T  33373530 cttggaaataatggtaatgccagaaaaaaccaaaaaatctgtat-ttttcttattaatttcaaaaatctgcat----aaaaaacctctttctaaaatcat 33373436  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  33373435 ccaaccattttatgcagtttgaaccataataaacccgttgaacacagtaatccta 33373381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 24302925 - 24302757
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataaccatcctctcgctctgcccgaagcgaaagtgata-tt 121  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||| |||||| || ||||||||||||||||| |||||| ||||||| ||    
T  24302925 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaatcacaatcctctcgctctgcccaaagcgagagtgatattt 24302826  T
Q  122 ttctggaagggcatgtttgtttcggcatcgccgtt-atcaat---aaaaatcgtcgtttctttcacgac 186  Q
    ||||| |||||||||||||||||||||| |||||| || |||   |||||| |||||||||||||||||    
T  24302825 ttctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaaaattgtcgtttctttcacgac 24302757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 4527362 - 4527513
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttct-aaaatca 314  Q
    |||||||  ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||          |||||||| |||||||    
T  4527362 cttggaagcaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatg--aaaaaaaactctttctaaaaatca 4527457  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    || ||||||||||||||| ||||||||||||||| || ||||||||||||||||||    
T  4527458 tccaatcattatatgcaggttgaaccataataaatccgttgaacacagtaatccta 4527513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 24 - 184
Target Start/End: Original strand, 24865606 - 24865771
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    |||||||||||||| || ||||||| |  |||||||||||||| | ||||||| ||||||||   ||||||||||||||||| ||| || ||||||||||    
T  24865606 tcaatcatgcatgtgtctgagtaatataccttgttgcttaagtatcttgttttttcaaaatataaatcctctcgctctgcccaaagtgagagtgatattt 24865705  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa---tcgtcgtttctttcacg 184  Q
    |||| |||||||||||||||||||||| |||||| || ||||||||   | |||||||||||||||    
T  24865706 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaattttgtcgtttctttcacg 24865771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 216 - 365
Target Start/End: Complemental strand, 22932999 - 22932856
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||           ||||||||||||||||    
T  22932999 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat----aaaaaacctctttctaaaatcat 22932906  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | ||||||| || ||||||||||| ||||||||||| |||  ||||||||    
T  22932905 ccaatcattttacgcagattgaactataataaacccgttgggcacagtaa 22932856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 216 - 365
Target Start/End: Complemental strand, 23855444 - 23855301
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||           ||||||||||||||||    
T  23855444 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat----aaaaaacctctttctaaaatcat 23855351  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | ||||||| || ||||||||||| ||||||||||| |||  ||||||||    
T  23855350 ccaatcattttacgcagattgaactataataaacccgttgggcacagtaa 23855301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 27009806 - 27009960
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn----ct-ctttctaaa 310  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||| |     ||||||||||||||||||||              || |||||||||    
T  27009806 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtattttct-----taatttcaaaaatctgcatgaaaaaaaaaaaaaactactttctaaa 27009900  T
Q  311 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  27009901 atcatccaatcattatatgcaggttgaaccataataaaccctttgaacacagtaatccta 27009960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 216 - 369
Target Start/End: Original strand, 27021216 - 27021364
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||           ||| ||||||||||||    
T  27021216 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat---aaaaaaacctccttctaaaatcat 27021310  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 369  Q
    | ||||||| || ||||||||||| ||||||||||| |||  ||| ||||||||    
T  27021311 ccaatcattttacgcagattgaactataataaacccgttgggcacggtaatcct 27021364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 216 - 365
Target Start/End: Original strand, 26920457 - 26920601
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||           ||||||||||||||||    
T  26920457 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta-tttttcttattaatttcaaaaatctgcat----aaaaaccctctttctaaaatcat 26920551  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | || |||| || ||||||||||| ||||| ||||| |||  ||||||||    
T  26920552 ccaaccattttacgcagattgaactataatgaacccgttgggcacagtaa 26920601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 17090561 - 17090410
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaa-ccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatca 314  Q
    |||||||||||||||||| |||||||||| ||||||| ||||||||||  ||||||||||||||||||||||||            ||||||| ||||||    
T  17090561 cttggaaataatggtaatgccagaaaaaaaccaaaacatctgtatttt--cttattaatttcaaaaatctgcat--aaaaaaaccatctttctcaaatca 17090466  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    || ||||||| || ||||||||||||||||||||||| |||| |||||| ||||||    
T  17090465 tccaatcattttacgcagattgaaccataataaacccgttgagcacagtgatccta 17090410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 24302734 - 24302584
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| | ||||  ||||||||||||||||||||||||||||           ||||||||||||||||    
T  24302734 cttggaaataatggtaatgccagaaaaaaccaaaacatttgta--ttttcttattaatttcaaaaatctgcat---aaaaaaacctctttctaaaatcat 24302640  T
Q  316 ctaatc-attatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | || | ||| || ||||||||| ||||||||||||| ||||||||||||| ||||    
T  24302639 ccaaccaattttacgcagattgagccataataaacccgttgaacacagtaacccta 24302584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 365
Target Start/End: Complemental strand, 13297066 - 13296923
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| | ||||  ||||||||||||||||||||||||||||           ||||||||||||||||    
T  13297066 cttggaaataatggtaatgccagaaaaaaccaaaacatttgta--ttttcttattaatttcaaaaatctgcat----aaaaaacctctttctaaaatcat 13296973  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  13296972 ccaaccattttacgcagattgaactataataaacccgttgggcacagtaa 13296923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 365
Target Start/End: Original strand, 26990970 - 26991113
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||  ||||||  ||||||||||||||||||||||||||||           ||||||||||||||||    
T  26990970 cttggaaataatggtaatgccagaaaaaaccaaaatatctgta--ttttcttattaatttcaaaaatctgcat----aaaaaacctctttctaaaatcat 26991063  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  26991064 ccaaccattttacgcagattgaactataataaacccgttgggcacagtaa 26991113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 218 - 365
Target Start/End: Original strand, 20162697 - 20162844
Alignment:
Q  218 tggaaataatggtaataccagaaaaaa--ccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||| ||||||||||  |||| || ||||||||||  ||||||||||||||||||||||||           ||||||||||||||||    
T  20162697 tggaaataatggtaatgccagaaaaaaaaccaatacatctgtatttt--cttattaatttcaaaaatctgcataaaaaaaaaacctctttctaaaatcat 20162794  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | || |||| || |||||||||||||| |||||||| |||| ||||||||    
T  20162795 caaaccattttacgcagattgaaccattataaacccgttgagcacagtaa 20162844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 218 - 365
Target Start/End: Complemental strand, 22170134 - 22169987
Alignment:
Q  218 tggaaataatggtaataccagaaaaaa--ccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||| ||||||||||  |||| || ||||||||||  ||||||||||||||||||||||||           ||||||||||||||||    
T  22170134 tggaaataatggtaatgccagaaaaaaaaccaatacatctgtatttt--cttattaatttcaaaaatctgcataaaaaaaaaacctctttctaaaatcat 22170037  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | || |||| || |||||||||||||| |||||||| |||| ||||||||    
T  22170036 caaaccattttacgcagattgaaccattataaacccgttgagcacagtaa 22169987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 216 - 365
Target Start/End: Complemental strand, 15422434 - 15422292
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||||| |||||||||||           ||||||||||||||||    
T  15422434 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttc-aaaatctgcat----aaaaaacctctttctaaaatcat 15422342  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  15422341 ccaaccattttacgcagattgaactataataaacccgttgggcacagtaa 15422292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 14142502 - 14142345
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat----gnnnnnnnnnnctctttctaaaa 311  Q
    |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    |          |  |||||||||    
T  14142502 cttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaagaaaaaaaaaccattttctaaaa 14142404  T
Q  312 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  14142403 tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 14142345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 26788904 - 26789061
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat----gnnnnnnnnnnctctttctaaaa 311  Q
    |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    |          |  |||||||||    
T  26788904 cttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaagaaaaaaaaaccattttctaaaa 26789002  T
Q  312 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  26789003 tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 26789061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 27359218 - 27359061
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat----gnnnnnnnnnnctctttctaaaa 311  Q
    |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    |          |  |||||||||    
T  27359218 cttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaagaaaaaaaaaacattttctaaaa 27359120  T
Q  312 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  27359119 tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 27359061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 27449561 - 27449404
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat----gnnnnnnnnnnctctttctaaaa 311  Q
    |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    |          |  |||||||||    
T  27449561 cttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaagaaaaaaaaaacattttctaaaa 27449463  T
Q  312 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  27449462 tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 27449404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 13521300 - 13521142
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat----gnnnnnnnnnnctc-tttctaaa 310  Q
    |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    |          | | ||||||||    
T  13521300 cttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaagaaaaaaaaaacccttttctaaa 13521202  T
Q  311 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  13521201 atcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 13521142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 369
Target Start/End: Original strand, 29551556 - 29551708
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaa----ccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaa 311  Q
    |||||||| ||||||||| ||||||||||    ||||||| |||||||||| |||||||||||||||||||||||||           ||||||||||||    
T  29551556 cttggaaacaatggtaatgccagaaaaaaaaaaccaaaacatctgtatttt-tcttattaatttcaaaaatctgcat----aaaaaccctctttctaaaa 29551650  T
Q  312 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 369  Q
    ||||| || |||| || ||||||||||| ||||| ||||| |||  ||||||||||||    
T  29551651 tcatccaaccattttacgcagattgaactataatgaacccgttgggcacagtaatcct 29551708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #85
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 216 - 365
Target Start/End: Original strand, 24865797 - 24865940
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaacc-aaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatca 314  Q
    |||||||||||||||||| |||||||||||| ||||| ||||||  |||||||||||||||| |||||||||||           |||||||||||||||    
T  24865797 cttggaaataatggtaatgccagaaaaaaccaaaaacatctgta--ttttcttattaatttc-aaaatctgcat----aaaaaccctctttctaaaatca 24865889  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    || || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  24865890 tccaaccattttacgcagattgaactataataaacccgttgggcacagtaa 24865940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #86
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 27251963 - 27251805
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat-----gnnnnnnnnnnctctttctaaa 310  Q
    |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||                |  ||||||||    
T  27251963 cttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaagaaaaaaaaaaccattttctaaa 27251865  T
Q  311 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  27251864 atcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 27251805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #87
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 28163580 - 28163736
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat---gnnnnnnnnnnctctttctaaaat 312  Q
    |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||              |  ||||||||||    
T  28163580 cttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaagaaaaaaaaccattttctaaaat 28163678  T
Q  313 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||  || ||||  |||||| |||||||||||||||||| ||||||||||||||||||    
T  28163679 cattcaaccattcaatgcagtttgaaccataataaacccgttgaacacagtaatccta 28163736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #88
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 288
Target Start/End: Complemental strand, 8891579 - 8891508
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 288  Q
    |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    
T  8891579 cttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcat 8891508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #89
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 288
Target Start/End: Complemental strand, 8902814 - 8902743
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 288  Q
    |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    
T  8902814 cttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcat 8902743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #90
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 370
Target Start/End: Complemental strand, 34462525 - 34462473
Alignment:
Q  318 aatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  34462525 aatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 34462473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #91
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 303 - 370
Target Start/End: Complemental strand, 8891486 - 8891419
Alignment:
Q  303 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  8891486 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 8891419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #92
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 303 - 370
Target Start/End: Complemental strand, 8902721 - 8902654
Alignment:
Q  303 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  8902721 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 8902654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #93
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 303 - 370
Target Start/End: Original strand, 27197363 - 27197430
Alignment:
Q  303 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  27197363 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 27197430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #94
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 367
Target Start/End: Original strand, 16751937 - 16752047
Alignment:
Q  253 tctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcatctaatcattatatgcagattgaaccataataaaccca 352  Q
    ||||||||||||||||||||||||||||||||||||           ||||||||||||||||| || |||| || ||||||||||| ||||| |||||     
T  16751937 tctgtattttttcttattaatttcaaaaatctgcat----aaaaaccctctttctaaaatcatccaaccattttacgcagattgaactataatgaacccg 16752032  T
Q  353 ttgaacacagtaatc 367  Q
    |||  ||||||||||    
T  16752033 ttgggcacagtaatc 16752047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #95
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 303 - 370
Target Start/End: Complemental strand, 22456132 - 22456065
Alignment:
Q  303 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||| ||||    
T  22456132 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaacccta 22456065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #96
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 27197275 - 27197345
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 288  Q
    ||||||||||||||||||||||| |||||||||||| ||| || |||||||||| ||||||||| | ||||||    
T  27197275 cttggaaataatggtaataccag-aaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcat 27197345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #97
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 288
Target Start/End: Complemental strand, 22456223 - 22456152
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 288  Q
    ||||||||||| |||||| ||||||||||||||||| ||| |  |||||||||| || |||||| ||||||||    
T  22456223 cttggaaataacggtaatgccagaaaaaaccaaaacatct-tcatttttcttatcaacttcaaagatctgcat 22456152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 150; Significance: 3e-79; HSPs: 76)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 16043209 - 16043378
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16043209 cattccttcaatcatgcatgtttccgagtaatgtgttttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 16043308  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  16043309 atattttctgtaagggcatgtttgtttcggcatcgccgttattaataaaaatcgtcgtttctttcacgac 16043378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 16448255 - 16448086
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  16448255 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaaaatcctctcgctctgcccgaagcgaaagtg 16448156  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  16448155 atattttctgtaagggcatgtttgtttcggcatcgccgttattaataaaaatcgtcgtttctttcacgac 16448086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 2776124 - 2776298
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2776124 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 2776223  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  2776224 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgac 2776298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 26485458 - 26485632
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26485458 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 26485557  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  26485558 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgac 26485632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 26682379 - 26682205
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26682379 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 26682280  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  26682279 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgac 26682205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 39210402 - 39210228
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39210402 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 39210303  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || |||||| |||||||||||||||||    
T  39210302 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaattgtcgtttctttcacgac 39210228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 45734182 - 45734358
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaa-taaccatcctctcgctctgcccgaagc 109  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  45734182 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 45734281  T
Q  110 gaaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    || ||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  45734282 gacagtaatattttctgtaagggcatgtttgtttcggcatcgccgttattaataaaaattgtcgtttctttcacgac 45734358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 31087885 - 31087711
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  31087885 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctacccgaagcg 31087786  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  31087785 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgac 31087711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 2108426 - 2108280
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtg-ttttgtttttcaaaataaccatcctctcgctctgcccgaagc 109  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  2108426 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctttagtgcttttgtttttcaaaataacaatcctctcgctctgcccaaagc 2108327  T
Q  110 gaaagtgatattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    || |||||||||||||| |||||||||||||||||||||| ||||||    
T  2108326 gagagtgatattttctgtaagggcatgtttgtttcggcattgccgtt 2108280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 4201275 - 4201445
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| || | ||||||||  |||||||| ||||||||||||||||| |||||| ||||    
T  4201275 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 4201374  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaatcgtcgtttctttcacgac 186  Q
    |||||||||| |||||| ||||||||||||||| |||||| || ||||||||| |||||||||||||||||    
T  4201375 atattttctgtaagggcgtgtttgtttcggcattgccgttgattaataaaaattgtcgtttctttcacgac 4201445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 26318126 - 26317955
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||| || | ||||||||  |||||||| ||||||||||||||||| |||||| ||||    
T  26318126 cattccttcaatcatgcatgttttcgagtaatgtgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 26318027  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt--atcaataaaaatcgtcgtttctttcacgac 186  Q
    |||||||||| |||||| ||||||||||||||| ||||||  || ||||||||| |||||||||||||||||    
T  26318026 atattttctgtaagggcgtgtttgtttcggcattgccgtttgatgaataaaaattgtcgtttctttcacgac 26317955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 5145597 - 5145459
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  5145597 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 5145499  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| ||||| |||||||||||||||| ||||||    
T  5145498 atattttctgtaagggtatgtttgtttcggcattgccgtt 5145459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 16749771 - 16749633
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  16749771 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 16749673  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  16749672 atattttctgtaagggcatgtttgtttcggcattgccgtt 16749633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 17525418 - 17525556
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  17525418 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 17525516  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  17525517 atattttctgtaagggcatgtttgtttcggcattgccgtt 17525556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 17527797 - 17527659
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  17527797 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 17527699  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  17527698 atattttctgtaagggcatgtttgtttcggcattgccgtt 17527659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 26668171 - 26668033
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  26668171 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 26668073  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  26668072 atattttctgtaagggcatgtttgtttcggcatcgccgtt 26668033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 45389106 - 45389244
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||| || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  45389106 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgcttaaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 45389204  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  45389205 atattttctgtaagggcatgtttgtttcggcattgccgtt 45389244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 3447192 - 3447330
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  3447192 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 3447290  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  3447291 atattttctgtaagggcatgtttgtttcggcattgccgtt 3447330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 4143503 - 4143365
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  4143503 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 4143405  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  4143404 atattttctgtaagggcatgtttgtttcggcattgccgtt 4143365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 216 - 372
Target Start/End: Original strand, 4201466 - 4201620
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  4201466 cttggaaaaaatggtaatgccagaaaaaaccaaaacatctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaacaactctttctaaaatcat 4201563  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatg 372  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  4201564 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcctatg 4201620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 9620537 - 9620675
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  9620537 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 9620635  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  9620636 atattttctgtaagggcatgtttgtttcggcattgccgtt 9620675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 11442765 - 11442903
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  11442765 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 11442863  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  11442864 atattttctgtaagggcatgtttgtttcggcattgccgtt 11442903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 26273351 - 26273213
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  26273351 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 26273253  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  26273252 atattttctgtaagggcatgtttgtttcggcattgccgtt 26273213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 26437143 - 26437281
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  26437143 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 26437241  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  26437242 atattttctgtaagggcatgtttgtttcggcattgccgtt 26437281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 26514667 - 26514805
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  26514667 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 26514765  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  26514766 atattttctgtaagggcatgtttgtttcggcattgccgtt 26514805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 26536127 - 26535989
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  26536127 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 26536029  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  26536028 atattttctgtaagggcatgtttgtttcggcattgccgtt 26535989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 31126806 - 31126944
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| | ||||||||||||||| |||||| ||||    
T  31126806 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaaccctctcgctctgcccaaagcgagagtg 31126904  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  31126905 atattttctgtaagggcatgtttgtttcggcattgccgtt 31126944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 31562647 - 31562508
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| ||||||||  |||||||| ||||||||||||||||| |||||| ||||    
T  31562647 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 31562548  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    || ||||||| |||||||||||||||||||||| ||||||    
T  31562547 attttttctgtaagggcatgtttgtttcggcattgccgtt 31562508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 5129885 - 5130050
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||    
T  5129885 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 5129984  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgac 186  Q
    |||| |||||||||||||||||||||| |||||| || ||| |||||| |||||||||||||||||    
T  5129985 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaattgtcgtttctttcacgac 5130050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 5161412 - 5161577
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||    
T  5161412 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 5161511  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgac 186  Q
    |||| |||||||||||||||||||||| |||||| || ||| |||||| |||||||||||||||||    
T  5161512 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaattgtcgtttctttcacgac 5161577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 16734522 - 16734370
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  16734522 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaatcat 16734425  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| ||||||||||| |||||| ||||||||||||||||||    
T  16734424 ccaatcattatatgcaggttgaaccataacaaacccgttgaacacagtaatccta 16734370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 17527603 - 17527451
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  17527603 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaatcat 17527506  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| ||||||||||| |||||| ||||||||||||||||||    
T  17527505 ccaatcattatatgcaggttgaaccataacaaacccgttgaacacagtaatccta 17527451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 3447384 - 3447535
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  3447384 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaa-ctctttctaaaatcat 3447480  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  3447481 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 3447535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 9620729 - 9620879
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  9620729 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaa--ctctttctaaaatcat 9620824  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  9620825 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 9620879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 16734717 - 16734578
Alignment:
Q  17 cattcattcaatcatgcatgtttccga-gtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagt 115  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| |||    
T  16734717 cattccttcaatcatgcatgtttccgaagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagt 16734619  T
Q  116 gatattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    ||||||||||| |||||||||||||||||||||| ||||||    
T  16734618 gatattttctgtaagggcatgtttgtttcggcattgccgtt 16734578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 24590798 - 24590660
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| ||| || ||||    
T  24590798 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttattgctttgtttt-caaaataacaatcctctcgctctgcccaaagtgagagtg 24590700  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  24590699 atattttctgtaagggcatgtttgtttcggcattgccgtt 24590660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 11442962 - 11443116
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn--ctctttctaaaatc 313  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||            ||||||||||||||    
T  11442962 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaactctttctaaaatc 11443059  T
Q  314 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  11443060 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 11443116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 16749577 - 16749426
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  16749577 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaa-ctctttctaaaatcat 16749481  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| ||||||||||| |||||| ||||||||||||||||||    
T  16749480 ccaatcattatatgcaggttgaaccataacaaacccgttgaacacagtaatccta 16749426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 17525612 - 17525763
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||          ||||||||||||||||    
T  17525612 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatg-aaaaaaaaactctttctaaaatcat 17525708  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| ||||||||||| |||||| ||||||||||||||||||    
T  17525709 ccaatcattatatgcaggttgaaccataacaaacccgttgaacacagtaatccta 17525763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 45389298 - 45389449
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||          |||||||||||| |||    
T  45389298 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatg-aaaaaaaaactctttctaaaaccat 45389394  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  45389395 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 45389449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 10915118 - 10914952
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt--caaaataaccatcctctcgctctgcccgaagcgaaagtgatatt 121  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | || |||||  ||||||||| ||||||||||||||||| |||||| |||||||||    
T  10915118 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttatttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatt 10915019  T
Q  122 ttctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgac 186  Q
    ||||| |||||||||||||||||||||| |||||| || ||| |||||| |||||||||||||||||    
T  10915018 ttctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaattgtcgtttctttcacgac 10914952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 216 - 369
Target Start/End: Original strand, 26437336 - 26437485
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  26437336 cttggaaacaatggtaatgccagaaaaaaccaaaacgtttgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaa--ctctttctaaaatcat 26437431  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 369  Q
    | ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  26437432 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 26437485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 26667976 - 26667823
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn-ctctttctaaaatca 314  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||           |||||||||||||||    
T  26667976 cttggaaacaatggtaatgccagaaaaaaccaaaacgtttgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaaatca 26667879  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  26667878 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 26667823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 31562454 - 31562299
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn---ctctttctaaaat 312  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||             |||||||||||||    
T  31562454 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaaactctttctaaaat 31562357  T
Q  313 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  31562356 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 31562299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 2156466 - 2156631
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||| | | ||||||| |||||||||| ||| ||||||||||||| |||||| ||||||||||    
T  2156466 tcaatcatgcatgtttctgagtaatataccttgttgcttaaatatcttgttttttcaaaataacaatcatctcgctctgcccaaagcgagagtgatattt 2156565  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa-tcgtcgtttctttcacgac 186  Q
    |||| |||||||||||||||||||||| |||||| || |||||||| | |||||||||||||||||    
T  2156566 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaagttgtcgtttctttcacgac 2156631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 216 - 369
Target Start/End: Complemental strand, 26535935 - 26535783
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn-ctctttctaaaatca 314  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||           |||||||||||||||    
T  26535935 cttggaaacaatggtaatgccagaaaaaaccaaaacgtttgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaaatca 26535838  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 369  Q
    || ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  26535837 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 26535783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 4143309 - 4143155
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn--ctctttctaaaatc 313  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||             ||||||||||||||    
T  4143309 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcataaaaaaaaaaaaactctttctaaaatc 4143212  T
Q  314 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  4143211 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 4143155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 5145404 - 5145249
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnc---tctttctaaaat 312  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||              ||||||||||||    
T  5145404 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaaattctttctaaaat 5145307  T
Q  313 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  5145306 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 5145249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 16501651 - 16501518
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||| ||||||||| ||||||||||||||||| |||||| ||||||||||    
T  16501651 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 16501552  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||| ||||||| |||||||||||||| ||||||    
T  16501551 tctgtaagggcacgtttgtttcggcattgccgtt 16501518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 16516687 - 16516554
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||| ||||||||| ||||||||||||||||| |||||| ||||||||||    
T  16516687 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 16516588  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||| ||||||| |||||||||||||| ||||||    
T  16516587 tctgtaagggcacgtttgtttcggcattgccgtt 16516554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 31127001 - 31127152
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||          ||||||||||||||||    
T  31127001 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatg-aaaaaaagactctttctaaaatcat 31127097  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
      || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  31127098 tcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 31127152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 26514860 - 26515021
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg---------nnnnnnnnnnctctttc 306  Q
    |||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||                   |||||||    
T  26514860 cttggaaataatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaaaaactctttc 26514957  T
Q  307 taaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  26514958 taaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 26515021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 11423027 - 11422859
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt---caaaataaccatcctctcgctctgcccgaagcgaaagtgatat 120  Q
    ||||||||||||||||| ||||||| |  || ||||||||||| ||| ||||||   |||||| || ||||||||||||||||| |||||| ||||||||    
T  11423027 tcaatcatgcatgtttctgagtaatatacctcgttgcttaagtatttcgttttttttcaaaatgacaatcctctcgctctgcccaaagcgagagtgatat 11422928  T
Q  121 tttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgac 186  Q
    |||||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| ||||||    
T  11422927 tttctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgac 11422859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 216 - 369
Target Start/End: Complemental strand, 24590602 - 24590444
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn-------ctctttcta 308  Q
    |||||||| ||||||||||||||||||||||||||| | ||||||||  |||||||||||||||||||||||||                 |||||||||    
T  24590602 cttggaaacaatggtaataccagaaaaaaccaaaacatttgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaaactctttcta 24590505  T
Q  309 aaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 369  Q
    |||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  24590504 aaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 24590444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 216 - 365
Target Start/End: Original strand, 5130076 - 5130220
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||           ||||||||||||||||    
T  5130076 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta-tttttcttattaatttcaaaaatctgcat----aaaaaccctctttctaaaatcat 5130170  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  5130171 ccaaccattttacgcagattgaactataataaacccgttgggcacagtaa 5130220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 216 - 373
Target Start/End: Complemental strand, 26273156 - 26272992
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn---------ctctttc 306  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||                    ||| |||    
T  26273156 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcataaaaaaaaaaaaaaaaaaaactccttc 26273059  T
Q  307 taaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatgc 373  Q
    |||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||    
T  26273058 taaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaattctatgc 26272992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 216 - 365
Target Start/End: Complemental strand, 16501451 - 16501308
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||           ||||||||||||||||    
T  16501451 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat----aaaaaacctctttctaaaatcat 16501358  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  16501357 ccaaccattttacgcagattgaactataataaacccgttgggcacagtaa 16501308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 216 - 351
Target Start/End: Complemental strand, 16516487 - 16516358
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||           ||||||||||||||||    
T  16516487 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat----aaaaaacctctttctaaaatcat 16516394  T
Q  316 ctaatcattatatgcagattgaaccataataaaccc 351  Q
    | || |||| || ||||||||||| |||||||||||    
T  16516393 ccaaccattttacgcagattgaactataataaaccc 16516358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 288
Target Start/End: Complemental strand, 2108221 - 2108150
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 288  Q
    |||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  2108221 cttggaaataatggtaatgccagaaaaaaccaaaacatctgtat-ttttcttattaatttcaaaaatctgcat 2108150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 16043400 - 16043548
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||| || |||||||||||||||||||||||||||||           || |||||||||||||    
T  16043400 cttggaaataatggtaatgccagaaaaaaccaaaacatcttta-tttttcttattaatttcaaaaatctgcat-----aaaaacctttttctaaaatcat 16043493  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | || |||| || ||||||| ||||||||||||||| |||  |||||||| ||||    
T  16043494 ccaaccattttacgcagattaaaccataataaacccgttgggcacagtaacccta 16043548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 303 - 373
Target Start/End: Complemental strand, 26317824 - 26317754
Alignment:
Q  303 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatgc 373  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||    
T  26317824 tttctaaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaattctatgc 26317754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 216 - 288
Target Start/End: Complemental strand, 10914927 - 10914857
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 288  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  10914927 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat 10914857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 216 - 365
Target Start/End: Original strand, 5161603 - 5161747
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||  ||||||  ||||||||||||||||||||||||||||           ||||||||||||||||    
T  5161603 cttggaaataatggtaatgccagaaaaaaccaaaatatctgta--ttttcttattaatttcaaaaatctgcat---aaaaaaccctctttctaaaatcat 5161697  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | || |||| || ||||||||||| ||||| ||||| |||  ||||||||    
T  5161698 ccaaccattttacgcagattgaactataatgaacccgttgggcacagtaa 5161747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 216 - 369
Target Start/End: Original strand, 2776342 - 2776498
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat----gnnnnnnnnnnctctttctaaaa 311  Q
    |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    |          |  |||||||||    
T  2776342 cttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaagaaaaaaaaaccattttctaaaa 2776440  T
Q  312 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 369  Q
    ||||  || |||| ||||||| |||||||||||||||||| |||||||||||||||||    
T  2776441 tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatcct 2776498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 365
Target Start/End: Complemental strand, 11422837 - 11422693
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaa-ccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatca 314  Q
    |||||||||||||||||| | |||||||| ||||||| ||| ||||||  ||||||||||||||||||||||||           |||||||||||||||    
T  11422837 cttggaaataatggtaatgctagaaaaaaaccaaaacatctatatttt--cttattaatttcaaaaatctgcat----aaaaaccctctttctaaaatca 11422744  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    || || |||| || ||||||||||| ||||||||||| |||| ||||||||    
T  11422743 tccaaccattttacgcagattgaactataataaacccgttgagcacagtaa 11422693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 216 - 365
Target Start/End: Original strand, 2156655 - 2156798
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||||| |||||||||||            |||||||||||||||    
T  2156655 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttc-aaaatctgcat---aaaaaaccttctttctaaaatcat 2156748  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  2156749 ccaaccattttacgcagattgaactataataaacccgttgggcacagtaa 2156798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 217 - 370
Target Start/End: Original strand, 45734401 - 45734558
Alignment:
Q  217 ttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat-----gnnnnnnnnnnctctttctaaaa 311  Q
    ||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||     |          |  |||||||||    
T  45734401 ttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaaagaaaaaaaaaccattttctaaaa 45734499  T
Q  312 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  45734500 tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 45734558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 26317932 - 26317862
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg 289  Q
    |||||||| ||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||| |||||||    
T  26317932 cttggaaa-aatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaacctgcatg 26317862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 26682157 - 26681999
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat-----gnnnnnnnnnnctctttctaaa 310  Q
    |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||                |  ||||||||    
T  26682157 cttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaagaaaaaaaaaaccattttctaaa 26682059  T
Q  311 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  26682058 atcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 26681999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 288
Target Start/End: Complemental strand, 31087678 - 31087607
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 288  Q
    |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    
T  31087678 cttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcat 31087607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 288
Target Start/End: Complemental strand, 39210193 - 39210122
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 288  Q
    |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    
T  39210193 cttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcat 39210122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 303 - 370
Target Start/End: Complemental strand, 26512656 - 26512589
Alignment:
Q  303 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  26512656 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 26512589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 303 - 370
Target Start/End: Complemental strand, 31087582 - 31087515
Alignment:
Q  303 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  31087582 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 31087515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 303 - 370
Target Start/End: Complemental strand, 39210099 - 39210032
Alignment:
Q  303 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  39210099 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 39210032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 281
Target Start/End: Complemental strand, 16448064 - 16448002
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaa 281  Q
    |||||||||||||||||| |||||||||||||||||  | |||  |||||||||||||||||||||    
T  16448064 cttggaaataatggtaatgccagaaaaaaccaaaac-accgta--ttttcttattaatttcaaaaa 16448002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 275
Target Start/End: Complemental strand, 26512749 - 26512691
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaattt 275  Q
    |||||||| ||||||||||||||||||||||||||  | | |||||||| ||||||||||    
T  26512749 cttggaaaaaatggtaataccagaaaaaaccaaaaaatttttatttttt-ttattaattt 26512691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 150; Significance: 3e-79; HSPs: 89)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 21701524 - 21701355
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21701524 cattccttcaatcatgcatgtttccgagtaatgtgttttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 21701425  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21701424 atattttctgtaagggcatgtttgtttcggcatcgccgttattaataaaaatcgtcgtttctttcacgac 21701355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 3785371 - 3785545
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3785371 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 3785470  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  3785471 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgac 3785545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 16164362 - 16164536
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16164362 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 16164461  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  16164462 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgac 16164536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 22925510 - 22925336
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22925510 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 22925411  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  22925410 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgac 22925336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 34157727 - 34157901
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34157727 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 34157826  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  34157827 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgac 34157901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 27119405 - 27119581
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaa-taaccatcctctcgctctgcccgaagc 109  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  27119405 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 27119504  T
Q  110 gaaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    || |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  27119505 gacagtgatattttctgtaagggcatgtttgtttcggcatcgccgttattaataaaaattgtcgtttctttcacgac 27119581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 31890852 - 31890676
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaa-taaccatcctctcgctctgcccgaagc 109  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||| |||||||||||||    
T  31890852 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttatgtgttttgtttttcaaaaataacaatcctctcactctgcccgaagc 31890753  T
Q  110 gaaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    || |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  31890752 gacagtgatattttctgtaagggcatgtttgtttcggcatcgccgttattaataaaaattgtcgtttctttcacgac 31890676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 27779103 - 27779272
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttc-aaaataaccatcctctcgctctgcccgaagcgaaagt 115  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  27779103 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataaccatcctctcgctctgcccgaagcgaaagt 27779202  T
Q  116 gatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    |||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  27779203 gata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgac 27779272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 27818861 - 27819030
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttc-aaaataaccatcctctcgctctgcccgaagcgaaagt 115  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  27818861 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataaccatcctctcgctctgcccgaagcgaaagt 27818960  T
Q  116 gatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    |||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  27818961 gata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgac 27819030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 27393440 - 27393612
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27393440 catcaacattccttcaatcatgcataattccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 27393539  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacg 184  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  27393540 aaagtgata-tttctggaagggcgtgtttgtttcggcattgccgttattaataaaaatcgtcgtttctttcacg 27393612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 19454782 - 19454614
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  19454782 cattccttcaatcatgcatgtttccgagtagtgtgtcttgttgcttaagtgttctgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 19454683  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgttatcaat-aaaaatcgtcgtttctttcacg 184  Q
    |||||||||| ||||||||||||||||| ||||||||||||| ||| |||||||||||||| |||||||    
T  19454682 atattttctgtaagggcatgtttgtttcagcatcgccgttattaataaaaaatcgtcgtttttttcacg 19454614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 11633545 - 11633375
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| || | ||||||||  |||||||| ||||||||||||||||| |||||| ||||    
T  11633545 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 11633446  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaatcgtcgtttctttcacgac 186  Q
    |||||||||| |||||| ||||||||||||||| |||||| || ||||||||| |||||||||||||||||    
T  11633445 atattttctgtaagggcgtgtttgtttcggcattgccgttgatgaataaaaattgtcgtttctttcacgac 11633375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 34288235 - 34288404
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||||||||||||||||| |||| || |||| |||||||| ||||||||| ||||||||||||||||| ||| |||||||    
T  34288235 cattccttcaatcatgcatgtttccgagtaatgtgtctcgttggtttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagagaaagtg 34288333  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaatcgtcgtttctttcacgac 186  Q
    |||||||||| |||||||||||||||||||||| |||||| || ||||||||| |||||||||||||||||    
T  34288334 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattgtcgtttctttcacgac 34288404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 34293295 - 34293464
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||||||||||||||||| |||| || |||| |||||||| ||||||||| ||||||||||||||||| ||| |||||||    
T  34293295 cattccttcaatcatgcatgtttccgagtaatgtgtctcgttggtttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagagaaagtg 34293393  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaatcgtcgtttctttcacgac 186  Q
    |||||||||| |||||||||||||||||||||| |||||| || ||||||||| |||||||||||||||||    
T  34293394 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattgtcgtttctttcacgac 34293464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 34302827 - 34302700
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttc-aaaataaccatcctctcgctctgcccgaagc 109  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  34302827 catcatcattccctcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 34302728  T
Q  110 gaaagtgatattttctggaagggcatgt 137  Q
    || |||||||||||||| ||||||||||    
T  34302727 gacagtgatattttctgtaagggcatgt 34302700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 37949682 - 37949512
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  37949682 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 37949584  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgac 186  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  |||||||||||| ||||||    
T  37949583 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaatttcgtcgtttcttccacgac 37949512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 40235589 - 40235739
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  40235589 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg----aaaaaactctttctaaaatcat 40235684  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  40235685 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 40235739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 5807170 - 5807291
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttc-aaaataaccatcctctcgctctgcccgaagc 109  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  5807170 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 5807269  T
Q  110 gaaagtgatattttctggaagg 131  Q
    || |||||||||||||| ||||    
T  5807270 gacagtgatattttctgtaagg 5807291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 9348342 - 9348204
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  9348342 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 9348244  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  9348243 atattttctgtaagggcatgtttgtttcggcattgccgtt 9348204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 13934711 - 13934560
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  13934711 cttggaaataatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaa-ctctttctaaaatcat 13934615  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  13934614 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 13934560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 259113 - 258975
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  259113 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 259015  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  259014 atattttctgtaagggcatgtttgtttcggcattgccgtt 258975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 12588691 - 12588829
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  12588691 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 12588789  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  12588790 atattttctgtaagggcatgtttgtttcggcattgccgtt 12588829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 12714962 - 12714824
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  12714962 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 12714864  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  12714863 atattttctgtaagggcatgtttgtttcggcattgccgtt 12714824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 13934904 - 13934766
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  13934904 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 13934806  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  13934805 atattttctgtaagggcatgtttgtttcggcattgccgtt 13934766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 16827698 - 16827560
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  16827698 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 16827600  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  16827599 atattttctgtaagggcatgtttgtttcggcattgccgtt 16827560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 16893783 - 16893921
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  16893783 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 16893881  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  16893882 atattttctgtaagggcatgtttgtttcggcattgccgtt 16893921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 21675542 - 21675404
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  21675542 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 21675444  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  21675443 atattttctgtaagggcatgtttgtttcggcattgccgtt 21675404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 34863561 - 34863699
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  34863561 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 34863659  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  34863660 atattttctgtaagggcatgtttgtttcggcattgccgtt 34863699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 37684269 - 37684131
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  37684269 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 37684171  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  37684170 atattttctgtaagggcatgtttgtttcggcattgccgtt 37684131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 37699534 - 37699396
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  37699534 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 37699436  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  37699435 atattttctgtaagggcatgtttgtttcggcattgccgtt 37699396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 37927251 - 37927389
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  37927251 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 37927349  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  37927350 atattttctgtaagggcatgtttgtttcggcattgccgtt 37927389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 39050182 - 39050044
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  39050182 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 39050084  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  39050083 atattttctgtaagggcatgtttgtttcggcattgccgtt 39050044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 39891955 - 39892093
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  39891955 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 39892053  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  39892054 atattttctgtaagggcatgtttgtttcggcattgccgtt 39892093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 216 - 367
Target Start/End: Complemental strand, 19414666 - 19414517
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  19414666 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaatcat 19414569  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatc 367  Q
    | ||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  19414568 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatc 19414517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 27805781 - 27805934
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-nnnnnnnnnnctctttctaaaatca 314  Q
    |||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||           |||||||||||||||    
T  27805781 cttggaaataatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaaatca 27805878  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  27805879 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 27805934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 216 - 367
Target Start/End: Original strand, 39892148 - 39892297
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  39892148 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaatcat 39892245  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatc 367  Q
    | ||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  39892246 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatc 39892297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 258918 - 258766
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  258918 cttggaaacaatggtaatgccagaaaaaaccaaaacgtttgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaatcat 258821  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  258820 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 258766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 23126919 - 23126754
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| |||||||||  |||||||||||||| | |||||||| ||||||||| ||| ||||||||||||| |||||| ||||||||||    
T  23126919 tcaatcatgcatgtttctgagtaatgtaccttgttgcttaagtatcttgttttttcaaaataacaatcatctcgctctgcccaaagcgagagtgatattt 23126820  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgac 186  Q
    |||| |||||||||||||||||||||| |||||| || ||| |||||| |||||||||||||||||    
T  23126819 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaattgtcgtttctttcacgac 23126754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 216 - 369
Target Start/End: Original strand, 16893977 - 16894128
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  16893977 cttggaaacaatggtaatgccagaaaaaaccaaaacgtttgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaatcat 16894074  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 369  Q
    | ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  16894075 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 16894128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 17 - 149
Target Start/End: Original strand, 27805588 - 27805719
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  27805588 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 27805686  T
Q  117 atattttctggaagggcatgtttgtttcggcat 149  Q
    |||||||||| ||||||||||||||||||||||    
T  27805687 atattttctgtaagggcatgtttgtttcggcat 27805719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 31878162 - 31878300
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  31878162 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 31878260  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||| ||||||||||||||| ||||||    
T  31878261 atattttctgtaagggcgtgtttgtttcggcattgccgtt 31878300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 32051679 - 32051817
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| ||||||||||||||||||  |||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  32051679 cattccttcaatcatgcatgtttctaagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 32051777  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  32051778 atattttctgtaagggcatgtttgtttcggcattgccgtt 32051817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 12588884 - 12589039
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg---nnnnnnnnnnctctttctaaaat 312  Q
    |||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||             |||||||||||||    
T  12588884 cttggaaataatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaactctttctaaaat 12588981  T
Q  313 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  12588982 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 12589039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 34863762 - 34863915
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn-ctctttctaaaatca 314  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||           |||||||||||||||    
T  34863762 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaaatca 34863859  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  34863860 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 34863915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 37949488 - 37949335
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn-ctctttctaaaatca 314  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||           |||||||||||||||    
T  37949488 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaaatca 37949391  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  37949390 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 37949335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 39049988 - 39049832
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn----ctctttctaaaa 311  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||              ||||||||||||    
T  39049988 cttggaaataatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaaaactctttctaaaa 39049891  T
Q  312 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  39049890 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 39049832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 12714766 - 12714614
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||          || |||||||||||||    
T  12714766 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtat-ttttcttattaatttcaaaaatctgcatg-aaaaagaaactatttctaaaatcat 12714669  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | |||||||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  12714668 ccaatcattatatgcaggctgaaccataataaacccgttgaacacagtaatccta 12714614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 19414859 - 19414721
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  19414859 cattccttcaatcatgcatgtttttgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 19414761  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    || ||||||| |||||||||||||||||||||| ||||||    
T  19414760 atgttttctgtaagggcatgtttgtttcggcattgccgtt 19414721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 40235399 - 40235533
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt--tcaaaataaccatcctctcgctctgcccgaagcgaaagtgatatt 121  Q
    |||||||||||| |||| ||||||| |  |||||||||||||||| |||||||  |||||||||| ||||||||||||||||| ||||||||||||||||    
T  40235399 tcaatcatgcatatttctgagtaatataccttgttgcttaagtgtcttgtttttttcaaaataacaatcctctcgctctgcccaaagcgaaagtgatatt 40235498  T
Q  122 ttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    ||||| |||||||||||||||||||||| ||||||    
T  40235499 ttctgtaagggcatgtttgtttcggcattgccgtt 40235533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 37927445 - 37927600
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn---ctctttctaaaat 312  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||             |||||||||||||    
T  37927445 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaaactctttctaaaat 37927542  T
Q  313 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  37927543 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 37927600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 216 - 369
Target Start/End: Complemental strand, 16827504 - 16827352
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn-ctctttctaaaatca 314  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||           |||||||||||||||    
T  16827504 cttggaaacaatggtaatgccagaaaaaaccaaaacgtttgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaaatca 16827407  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 369  Q
    || ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  16827406 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 16827352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 20839789 - 20839922
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||    
T  20839789 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 20839888  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||| |||||||||||||||||||||| ||||||    
T  20839889 tctgtaagggcatgtttgtttcggcattgccgtt 20839922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 27432797 - 27432630
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||| ||||||||| ||||||||||||||||| |||||| ||||||||||    
T  27432797 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 27432698  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa---tcgtcgtttctttcacgac 186  Q
    |||| ||||||| |||||||||||||| |||||| || ||||||||   | |||||||||||||||||    
T  27432697 tctgtaagggcacgtttgtttcggcattgccgttgattaataaaaaaatttgtcgtttctttcacgac 27432630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 34288428 - 34288580
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttct-aaaatca 314  Q
    |||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||          |||||||| |||||||    
T  34288428 cttggaaaaaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatg-aaaaaaaaactctttctaaaaatca 34288524  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  34288525 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 34288580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 34293488 - 34293640
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttct-aaaatca 314  Q
    |||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||          |||||||| |||||||    
T  34293488 cttggaaaaaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatg-aaaaaaaaactctttctaaaaatca 34293584  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  34293585 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 34293640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 9348149 - 9347999
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||| ||||||          || |||||||||||||    
T  9348149 cttgggaataatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatttgcatgaaaaaaaa--ctttttctaaaatcat 9348054  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  9348053 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 9347999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 12657430 - 12657596
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||| ||||||||||||||||| ||||||  |||||||||    
T  12657430 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagcgtgatattt 12657529  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgac 186  Q
    |||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| ||||||    
T  12657530 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgac 12657596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 28884102 - 28884268
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttc-aaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||||  |||||||| ||| ||||||||||||| |||||| ||||||||||    
T  28884102 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttttaaaataacaatcatctcgctctgcccaaagcgagagtgatattt 28884201  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgac 186  Q
    |||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||||||||||    
T  28884202 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaatttgtcgtttctttcacgac 28884268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 31878361 - 31878517
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg----nnnnnnnnnnctctttctaaaa 311  Q
    |||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||              ||||||||||||    
T  31878361 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaaactctttctaaaa 31878458  T
Q  312 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
     |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  31878459 ccatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 31878517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 21675348 - 21675188
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn--------ctctttct 307  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||                  ||||||||    
T  21675348 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaaaactctttct 21675251  T
Q  308 aaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  21675250 aaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 21675188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 37377049 - 37377185
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt----tcaaaataaccatcctctcgctctgcccgaagcgaaagtgata 119  Q
    ||||||||||||||||| ||||||| |  |||||||||| |||  ||||||||    |||||||||| ||||||||||||||||| |||||| |||||||    
T  37377049 tcaatcatgcatgtttctgagtaatataccttgttgcttgagtactttgtttttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgata 37377148  T
Q  120 ttttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  37377149 ttttctgtaagggcatgtttgtttcggcattgccgtt 37377185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 37377240 - 37377402
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtatttttt------cttattaatttcaaaaatctgcatgnnnnnnnnnn--ctctttct 307  Q
    |||||||| ||||||||| ||||||||||||||||||||||| ||||||      |||||||||||||||||||||||||            ||||||||    
T  37377240 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgttttttttttctttcttattaatttcaaaaatctgcatgaaaaaaaaaaaactctttct 37377339  T
Q  308 aaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| ||||| ||||||||||||    
T  37377340 aaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaaaacagtaatccta 37377402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 32051878 - 32052034
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg----nnnnnnnnnnctctttctaaaa 311  Q
    |||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||              |  |||||||||    
T  32051878 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaaccattttctaaaa 32051975  T
Q  312 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||| ||||||||||||||| |||||||||||||||||| |||||||||||| |||||    
T  32051976 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtagtccta 32052034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 11633352 - 11633197
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaa-ccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn--ctctttctaaaa- 311  Q
    |||||||| ||||||||| |||||||||| ||||||||||||||||||  |||||||||||||||||||||||||            ||||||||||||     
T  11633352 cttggaaa-aatggtaatgccagaaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaactctttctaaaaa 11633256  T
Q  312 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  11633255 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 11633197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 216 - 369
Target Start/End: Original strand, 28884290 - 28884437
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||           ||||||||||||||||    
T  28884290 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat----aaaaaacctctttctaaaatcat 28884383  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 369  Q
    | || |||| || ||||||||||| ||||||||||| |||  ||||||||||||    
T  28884384 ccaaccattttacgcagattgaactataataaacccgttgggcacagtaatcct 28884437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 300 - 370
Target Start/End: Complemental strand, 37683978 - 37683908
Alignment:
Q  300 ctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  37683978 ctctttctaaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 37683908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 300 - 370
Target Start/End: Complemental strand, 37699243 - 37699173
Alignment:
Q  300 ctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  37699243 ctctttctaaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 37699173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 365
Target Start/End: Original strand, 20839995 - 20840139
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||           ||||||||||||||||    
T  20839995 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat---aaaaaaccctctttctaaaatcat 20840089  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | || |||| || ||||||||||| ||||| ||||| |||  ||||||||    
T  20840090 ccaaccattttacgcagattgaactataatgaacccgttgggcacagtaa 20840139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 369
Target Start/End: Complemental strand, 23126729 - 23126582
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||  ||||||  |||||||||||||||||||||||||| |           ||||||||||||||||    
T  23126729 cttggaaataatggtaatgccagaaaaaaccaaaatatctgta--ttttcttattaatttcaaaaatctgcgt----aaaaaccctctttctaaaatcat 23126636  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 369  Q
    | || |||| || ||||||||||| ||||||||||| |||  ||||||||||||    
T  23126635 ccaaccattttacgcagattgaactataataaacccgttgggcacagtaatcct 23126582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 365
Target Start/End: Complemental strand, 27432602 - 27432459
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  | ||||||||||||||||||||||||||           ||||||||||||||||    
T  27432602 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--tcttcttattaatttcaaaaatctgcat----aaaaaccctctttctaaaatcat 27432509  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  27432508 ccaaccattttacgcagattgaacgataataaacccgttgggcacagtaa 27432459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 219 - 370
Target Start/End: Original strand, 27119625 - 27119771
Alignment:
Q  219 ggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttc-aaaaatctgcatgnnnnnnnnnnctctttctaaaatcatct 317  Q
    ||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||||| ||||||||||||           |  |||||||||||||      
T  27119625 ggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaaatctgcat----aaaaaaccattttctaaaatcattc 27119718  T
Q  318 aatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  27119719 aaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 27119771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 37684075 - 37684004
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg 289  Q
    |||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  37684075 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatg 37684004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 37699340 - 37699269
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg 289  Q
    |||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  37699340 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatg 37699269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 216 - 365
Target Start/End: Original strand, 12657618 - 12657762
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaa-ccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatca 314  Q
    |||||||||||||||||| |||||||||| ||||||| ||||||||||  ||||||||||||||||||||||||           |||||||||||||||    
T  12657618 cttggaaataatggtaatgccagaaaaaaaccaaaacatctgtatttt--cttattaatttcaaaaatctgcat----aaaaaacctctttctaaaatca 12657711  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    || || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  12657712 tccaaccattttacgcagattgaactataataaacccgttgggcacagtaa 12657762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 21701334 - 21701183
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaa--ccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatc 313  Q
    |||||||||||||||||| ||||||||||  ||||||| ||||||||||  ||||||||||||||||||||||||           ||||||||||||||    
T  21701334 cttggaaataatggtaatgccagaaaaaaaaccaaaacatctgtatttt--cttattaatttcaaaaatctgcat---aaaaaaacctctttctaaaatc 21701240  T
Q  314 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||| || |||| || ||||||| ||||||||||||||| |||  |||||||| ||||    
T  21701239 atccaaccattttacgcagattaaaccataataaacccgttgggcacagtaacccta 21701183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 34271934 - 34271786
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttc-aaaaatctgcatgnnnnnnnnnnctctttctaaaatca 314  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  ||||||||| |||||| ||||||||||||           |||||||||||||||    
T  34271934 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttatcaatttcaaaaaatctgcat-----aaaaacctctttctaaaatca 34271842  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    || || |||| ||  ||||| || ||||||||||||| ||||||||||||| ||||    
T  34271841 tccaaccattttactcagatggagccataataaacccgttgaacacagtaacccta 34271786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 16164571 - 16164727
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat---gnnnnnnnnnnctctttctaaaat 312  Q
    |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||              |  ||||||||||    
T  16164571 cttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaagaaaaaaaaccattttctaaaat 16164669  T
Q  313 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  16164670 cattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 16164727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 34157935 - 34158091
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat---gnnnnnnnnnnctctttctaaaat 312  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||| |||| ||||||||| | ||||||              |  ||||||||||    
T  34157935 cttggaaataatggtaataccagaaaaaaccaaaacatctttatttttt-ttatcaatttcaaagaactgcataaaagaaaaaaaaccattttctaaaat 34158033  T
Q  313 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  34158034 cattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 34158091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 27393637 - 27393708
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 288  Q
    |||||||||||||||||| ||||||||||||||||| ||| || |||||||||||||||||||| ||||||||    
T  27393637 cttggaaataatggtaatgccagaaaaaaccaaaacatcttta-tttttcttattaatttcaaagatctgcat 27393708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 303 - 370
Target Start/End: Original strand, 3785673 - 3785740
Alignment:
Q  303 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||||||||||  ||||||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  3785673 tttctaaaatcattcaatcattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 3785740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 22925304 - 22925145
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat------gnnnnnnnnnnctctttctaa 309  Q
    |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||                 |  |||||||    
T  22925304 cttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaagaaaaaaaaaaaccattttctaa 22925206  T
Q  310 aatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||||  ||||||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  22925205 aatcattcaatcattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 22925145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 281
Target Start/End: Complemental strand, 19454588 - 19454525
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaa 281  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||||||||||    
T  19454588 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaa 19454525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 34272039 - 34271985
Alignment:
Q  132 gcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  34272039 gcatgtttgtttcggcatcgccgttattaataaaaattgtcgtttctttcacgac 34271985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 27779323 - 27779481
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat-----gnnnnnnnnnnctctttctaaa 310  Q
    |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||                |  ||||||||    
T  27779323 cttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaagaaaaaaaaaaccattttctaaa 27779421  T
Q  311 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  27779422 atcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 27779481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 27819080 - 27819238
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat-----gnnnnnnnnnnctctttctaaa 310  Q
    |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||                |  ||||||||    
T  27819080 cttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaagaaaaaaaaaaccattttctaaa 27819178  T
Q  311 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  27819179 atcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 27819238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 3785581 - 3785652
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 288  Q
    |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    
T  3785581 cttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcat 3785652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 288
Target Start/End: Complemental strand, 31890647 - 31890576
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 288  Q
    |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    
T  31890647 cttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcat 31890576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 303 - 370
Target Start/End: Complemental strand, 31890555 - 31890488
Alignment:
Q  303 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  31890555 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 31890488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 370
Target Start/End: Original strand, 27393726 - 27393793
Alignment:
Q  303 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||||||||||  || |||| || |||| |||||||||||||||||| ||||||||||||| ||||    
T  27393726 tttctaaaatcattcaaccattctacgcagtttgaaccataataaacccgttgaacacagtaacccta 27393793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 149; Significance: 1e-78; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 19658534 - 19658358
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaa-taaccatcctctcgctctgcccgaagc 109  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  19658534 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 19658435  T
Q  110 gaaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  19658434 gaaagtgatattttctgtaagggcatgtttgtttcggcatcgccgttattaataaaaattgtcgtttctttcacgac 19658358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 18711350 - 18711524
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18711350 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 18711449  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  18711450 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgac 18711524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 21374575 - 21374401
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21374575 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttctttttcaaaataaccatcctctcgctctgcccgaagcg 21374476  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21374475 aaagtgata-tttctggaaaggcgtgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 21374401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 44563863 - 44564037
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44563863 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 44563962  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  44563963 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaataaaaattgtcgtttctttcacgac 44564037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 33245386 - 33245563
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaa-taacca-tcctctcgctctgcccgaag 108  Q
    ||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||    
T  33245386 catcatcattccttcaatcatgcatgtttccgaataatgtgttttgttgcttaagtgttttgtttttcaaaaataacaaatcctctcgctctgcccgaag 33245485  T
Q  109 cgaaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  33245486 cgacagtgatattttctgtaagggcatgtttgtttcggcatcgccgttattaataaaaattgtcgtttctttcacgac 33245563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 22079238 - 22079066
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||| |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  22079238 catcaacattccttcaatcatgcataattctgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctcttcccgaagcg 22079139  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacg 184  Q
    | ||||||| |||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22079138 agagtgata-tttctgaaagggcgtgtttgtttcggcatcgccgttattaataaaaatcgtcgtttctttcacg 22079066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 16285341 - 16285503
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtgatatttt 123  Q
    ||||||||||||||||| ||||||| || |||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  16285341 tcaatcatgcatgtttctgagtaatatgccttgttgcttaagtatcttgtttttcaaaataacaatcctctcgctctgcccgaagcgagagtgatatttt 16285440  T
Q  124 ctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||| |||||||||||||||| |||||||| ||| | ||||||||| |||||||||||||||||    
T  16285441 ctgtaagggcatgtttgttttggcatcgctgttgttaataaaaattgtcgtttctttcacgac 16285503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 19206690 - 19206519
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||| || | ||||||||  |||||||| ||||||||||||||||| |||||| ||||    
T  19206690 cattccttcaatcatgcatgtttccgagtaatgcgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 19206591  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt--atcaataaaaatcgtcgtttctttcacgac 186  Q
    |||||||||| |||||| ||||||||||||||| ||||||  || ||||||||| |||||||||||||||||    
T  19206590 atattttctgtaagggcgtgtttgtttcggcattgccgtttgatgaataaaaattgtcgtttctttcacgac 19206519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 12091054 - 12090915
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| ||||||||  |||||||| ||||||||||||||||| |||||| ||||    
T  12091054 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 12090955  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  12090954 atattttctgtaagggcatgtttgtttcggcattgccgtt 12090915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 29831207 - 29831345
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  29831207 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 29831305  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  29831306 atattttctgtaagggcatgtttgtttcggcattgccgtt 29831345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 31356410 - 31356581
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || ||||||||  |||||||| ||||||||||||||||| |||||| ||||    
T  31356410 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 31356509  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgac 186  Q
    |||||||||| |||||||||||||||||||||| |||||| ||||||||||  | |||||||||| ||||||    
T  31356510 atattttctgtaagggcatgtttgtttcggcattgccgttgatcaataaaattttgtcgtttcttccacgac 31356581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 9356704 - 9356856
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  9356704 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaatcat 9356801  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  9356802 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 9356856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 19676326 - 19676464
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  19676326 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 19676424  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  19676425 atattttctgtaagggcatgtttgtttcggcattgccgtt 19676464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 28360285 - 28360147
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  28360285 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 28360187  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  28360186 atattttctgtaagggcatgtttgtttcggcattgccgtt 28360147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 19689990 - 19690156
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||    
T  19689990 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 19690089  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgac 186  Q
    |||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||||||||||    
T  19690090 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaatttgtcgtttctttcacgac 19690156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 31488203 - 31488064
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||| ||||||| | || ||||||||  |||||||| ||||||||||||||||| |||||| ||||    
T  31488203 cattccttcaatcatgcatgtttctgagtaatgtgtctcgttgctttaatgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 31488104  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  31488103 atattttctgtaagggcatgtttgtttcggcattgccgtt 31488064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 33260608 - 33260746
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| ||| || ||||    
T  33260608 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagtgagagtg 33260706  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  33260707 atattttctgtaagggcatgtttgtttcggcattgccgtt 33260746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 3327642 - 3327489
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttct-aaaatca 314  Q
    |||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||          |||||||| |||||||    
T  3327642 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaaatca 3327545  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  3327544 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 3327489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 216 - 368
Target Start/End: Original strand, 19676525 - 19676676
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||          || |||||||||||||    
T  19676525 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-tttttcttattaatttcaaaaatctgcatgaaaaaagaaactatttctaaaatcat 19676623  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcc 368  Q
    | |||||||||||||||  ||||||||||||||||| ||||||||||||||||    
T  19676624 ccaatcattatatgcaggctgaaccataataaacccgttgaacacagtaatcc 19676676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 29831404 - 29831557
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn-ctctttctaaaatca 314  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||           |||||||||||||||    
T  29831404 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaaatca 29831501  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  29831502 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 29831557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 31356606 - 31356759
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn-ctctttctaaaatca 314  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||           |||||||||||||||    
T  31356606 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaaatca 31356703  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  31356704 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 31356759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 14559516 - 14559681
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttg-tttttcaaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||| |||||||||||||| ||| ||||||||||||| |||||| ||||||||||    
T  14559516 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgctttttcaaaataacaatcatctcgctctgcccaaagcgagagtgatattt 14559615  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgac 186  Q
    |||| |||||||||||||||||||||| |||||| || ||| |||||| |||||||||||||||||    
T  14559616 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaattgtcgtttctttcacgac 14559681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 16279445 - 16279610
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||| ||| ||||||||||||| |||||| ||||||||||    
T  16279445 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcatctcgctctgcccaaagcgagagtgatattt 16279544  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgac 186  Q
    |||| |||||||||||||||||||||| |||||| || ||| |||||| |||||||||||||||||    
T  16279545 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaattgtcgtttctttcacgac 16279610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 9356515 - 9356646
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtgatatttt 123  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||||||||| ||||||  ||||||||||    
T  9356515 tcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagggtgatatttt 9356613  T
Q  124 ctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    ||| |||||||||||||||||||| | ||||||    
T  9356614 ctgtaagggcatgtttgtttcggcgttgccgtt 9356646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 3327837 - 3327698
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| |||||||||||| |||||||| |||| ||||||||  |||||||| ||||||||||||||||| ||||||  |||    
T  3327837 cattccttcaatcatgcatgtttctgagtaatgtgtcctgttgctttagtgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagggtg 3327738  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    || ||||||| |||||||||||||||||||||| ||||||    
T  3327737 attttttctgtaagggcatgtttgtttcggcattgccgtt 3327698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 18792599 - 18792765
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||    
T  18792599 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 18792698  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgac 186  Q
    |||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| ||||||    
T  18792699 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgac 18792765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 28360090 - 28359937
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn-ctctttctaaaatca 314  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||           |||||||||||||||    
T  28360090 cttggaaacaatggtaatgccagaaaaaaccaaaacgtttgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaaatca 28359993  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  28359992 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 28359937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 31488010 - 31487857
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn-ctctttctaaaatca 314  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||           |||||||||||| ||    
T  31488010 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaaacca 31487913  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  31487912 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 31487857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 2135582 - 2135417
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  || ||||||||||| | |||||||| ||||||||| ||||||||||||||||| |||||| |||| |||||    
T  2135582 tcaatcatgcatgtttctgagtaatatacctcgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtggtattt 2135483  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgac 186  Q
    |||| |||||||||||||||||||||| |||||| || ||| |||||| |||||||||||||||||    
T  2135482 tctgtaagggcatgtttgtttcggcatggccgttgattaataaaaaattgtcgtttctttcacgac 2135417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 12090860 - 12090708
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttct-aaaatca 314  Q
    |||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||          |||||||| |||||||    
T  12090860 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatg-aaaaaaaaactctttctaaaaatca 12090764  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  12090763 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 12090708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 216 - 373
Target Start/End: Complemental strand, 19206496 - 19206344
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  19206496 cttggaaa-aatggtaatgccagaaaaaaccaaaacgtttgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaa--ctctttctaaaatcat 19206402  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatgc 373  Q
    | ||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||    
T  19206401 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaattctatgc 19206344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 27607228 - 27607095
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||| ||||||||| ||| ||||||||||||| |||||| ||||||||||    
T  27607228 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcatctcgctctgcccaaagcgagagtgatattt 27607129  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||| |||||||||||||||||||||| ||||||    
T  27607128 tctgtaagggcatgtttgtttcggcattgccgtt 27607095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 33260806 - 33260965
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn-------ctctttcta 308  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||                 |||||||||    
T  33260806 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaaactctttcta 33260903  T
Q  309 aaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  33260904 aaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 33260965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 216 - 369
Target Start/End: Original strand, 18792787 - 18792935
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||           ||| ||||||||||||    
T  18792787 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat---aaaaaaacctccttctaaaatcat 18792881  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 369  Q
    | ||||||| || ||||||||||| ||||||||||| |||  ||||||||||||    
T  18792882 ccaatcattttacgcagattgaactataataaacccgttgggcacagtaatcct 18792935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 216 - 369
Target Start/End: Complemental strand, 27607038 - 27606891
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||           ||| ||||||||||||    
T  27607038 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat----aaaaaacctccttctaaaatcat 27606945  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 369  Q
    | ||||||| || ||||||||||| ||||||||||| |||  ||||||||||||    
T  27606944 ccaatcattttacgcagattgaactataataaacccgttgggcacagtaatcct 27606891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 216 - 365
Target Start/End: Original strand, 14559706 - 14559850
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||           ||||||||||||||||    
T  14559706 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta-tttttcttattaatttcaaaaatctgcat----aaaaaccctctttctaaaatcat 14559800  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  14559801 ccaaccattttacgcagattgaactataataaacccgttgggcacagtaa 14559850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 19658335 - 19658186
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttc-aaaaatctgcatgnnnnnnnnnnctctttctaaaatca 314  Q
    |||||||||||||||||| ||||||||||||||||| ||| || ||||||||||||||||| ||||||||||||           |||||||||||||||    
T  19658335 cttggaaataatggtaatgccagaaaaaaccaaaacatcttta-tttttcttattaatttcaaaaaatctgcat-----aaaaacctctttctaaaatca 19658242  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    || || |||| || ||||||||| ||||||||||||| ||||||||||||| ||||    
T  19658241 tccaaccattttacgcagattgagccataataaacccgttgaacacagtaacccta 19658186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 15770672 - 15770742
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 288  Q
    |||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  15770672 cttggaaataatggtaatgccagaaaaaaccaaaacgtc--tattttttcttattaatttcaaaaatctgcat 15770742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 365
Target Start/End: Original strand, 19690180 - 19690324
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||           ||| ||||||||||||    
T  19690180 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat---aaaaaaacctccttctaaaatcat 19690274  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  19690275 ccaaccattttacgcagattgaactataataaacccgttgggcacagtaa 19690324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 33245592 - 33245740
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttc-aaaaatctgcatgnnnnnnnnnnctctttctaaaatca 314  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||||| ||||||||||||           |||||||||||||||    
T  33245592 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaaatctgcat-----aaaaacctctttctaaaatca 33245684  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |  || | || || ||||||||| ||||||||||||| ||||||||||||| ||||    
T  33245685 ttcaaccgttttacgcagattgagccataataaacccgttgaacacagtaacccta 33245740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 216 - 365
Target Start/End: Complemental strand, 2135394 - 2135250
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaa-ccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatca 314  Q
    |||||||||||||||||| |||||||||| ||||||| ||||||||||  ||||||||||||||||||||||||           |||||||||||||||    
T  2135394 cttggaaataatggtaatgccagaaaaaaaccaaaacatctgtatttt--cttattaatttcaaaaatctgcat----aaaaaacctctttctaaaatca 2135301  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    || || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  2135300 tccaaccattttacgcagattgaactataataaacccgttgggcacagtaa 2135250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 21374365 - 21374209
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn---ctctttctaaaat 312  Q
    |||||||||||||||||| ||||||||||||||||| ||| ||||||  ||||| ||||||||| ||||||||              |||||| ||||||    
T  21374365 cttggaaataatggtaatgccagaaaaaaccaaaacatctttattttc-cttatcaatttcaaagatctgcataaaagaaaaaaaccctctttttaaaat 21374267  T
Q  313 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||| || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  21374266 catccaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 21374209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 216 - 365
Target Start/End: Original strand, 16279634 - 16279776
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||||| |||||||||||           ||||||||||||||||    
T  16279634 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttc-aaaatctgcat----aaaaaacctctttctaaaatcat 16279726  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  16279727 ccaaccattttacgcagattgaactataataaacccgttgggcacagtaa 16279776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 44564073 - 44564231
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat-----gnnnnnnnnnnctctttctaaa 310  Q
    |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||     |          |  ||||||||    
T  44564073 cttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaaagaaaaaaaaaacattttctaaa 44564171  T
Q  311 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  44564172 atcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 44564231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 216 - 365
Target Start/End: Original strand, 16285525 - 16285669
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||  ||||||  ||||||||||||||||||||| ||||||           ||||||||||||||||    
T  16285525 cttggaaataatggtaatgccagaaaaaaccaaaatatctgta--ttttcttattaatttcaaaaagctgcat---aaaaaaacctctttctaaaatcat 16285619  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | || |||| || ||||||||||  ||||||||||| |||  ||||||||    
T  16285620 ccaaccattttacgcagattgaattataataaacccgttgggcacagtaa 16285669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 18711558 - 18711715
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat----gnnnnnnnnnnctctttctaaaa 311  Q
    |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||               |  |||||||||    
T  18711558 cttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaaagaaaaaaaaccattttctaaaa 18711656  T
Q  312 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  18711657 tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 18711715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 216 - 281
Target Start/End: Complemental strand, 22079040 - 22078976
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaa 281  Q
    |||||||||||||||||| ||||||||||||||||| ||| || ||||||||||||||| ||||||    
T  22079040 cttggaaataatggtaatgccagaaaaaaccaaaacatcttta-tttttcttattaattacaaaaa 22078976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 186
Target Start/End: Original strand, 15770487 - 15770646
Alignment:
Q  28 tcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtgatattttctgg 127  Q
    ||||||||||||  ||||||||||| |||||||| | || |||| ||    |||||||| ||||||||| |||||||||  ||| ||||| |||  |||     
T  15770487 tcatgcatgttttagagtaatgtgttttgttgctcatgt-ttttcttccaaaaaataacaatcctctcgttctgcccgagacgagagtgacatta-ctgt 15770584  T
Q  128 aagggcatgtttgtttcggcatcgccgttat--caataaaaa-tcgtcgtttctttcacgac 186  Q
    |||||| ||||||||||||||| ||||||||   |||||||| | |||||||||||||||||    
T  15770585 aagggcgtgtttgtttcggcattgccgttataataataaaaatttgtcgtttctttcacgac 15770646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 303 - 370
Target Start/End: Complemental strand, 22078962 - 22078895
Alignment:
Q  303 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||  ||||||| ||||| ||||    
T  22078962 tttctaaaatcattcaaccattttatgcagtttgaaccataataaacctgttgaacatagtaacccta 22078895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 5e-78; HSPs: 123)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 5713909 - 5714083
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5713909 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 5714008  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  5714009 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgac 5714083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 5724819 - 5724993
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5724819 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 5724918  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  5724919 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgac 5724993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 5767549 - 5767375
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5767549 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 5767450  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  5767449 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgac 5767375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 31033651 - 31033477
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31033651 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 31033552  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  31033551 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgac 31033477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 32293476 - 32293650
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32293476 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 32293575  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  32293576 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgac 32293650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 17993360 - 17993186
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17993360 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 17993261  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||| ||||||||||||| |||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  17993260 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgcagttattaacaaaaatcgtcgtttctttcacgac 17993186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 4626626 - 4626802
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaa-taaccatcctctcgctctgcccgaagc 109  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  4626626 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 4626725  T
Q  110 gaaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||  ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  4626726 gacggtgatattttctgtaagggcatgtttgtttcggcatcgccgttattaataaaaattgtcgtttctttcacgac 4626802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 5653069 - 5653245
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaa-taaccatcctctcgctctgcccgaagc 109  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  5653069 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 5653168  T
Q  110 gaaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    || |||||||||||||  ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  5653169 gacagtgatattttctataagggcatgtttgtttcggcatcgccgttattaataaaaattgtcgtttctttcacgac 5653245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 18532234 - 18532402
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18532234 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 18532333  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgttatcaa-taaaaatcgtcgtttctttcacg 184  Q
    |||||||||  ||||||||||||||||| ||||||||||||| ||  ||||||||||||||||||||||    
T  18532334 atattttctataagggcatgtttgtttcagcatcgccgttattaacaaaaaatcgtcgtttctttcacg 18532402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 19696338 - 19696508
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataaccatcctctcgctctgcccgaagcgaaagt 115  Q
    ||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||    
T  19696338 cattccttcaatcatgcatgtttccgcataatgtgtcttgttgcttaagtgttttgttttttcaaaataacaatcctctcgctctgcccgaagcgacagt 19696437  T
Q  116 gatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||||  ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  19696438 gatattttctataagggcatgtttgtttcggcatcgccgttattaataaaaattgtcgtttctttcacgac 19696508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 29663388 - 29663242
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttc-aaaataaccatcctctcgctctgcccgaagc 109  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  29663388 catcatcattccttcaatcatgcatgtttccgagtaatgggtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 29663289  T
Q  110 gaaagtgatattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    || |||||||||||||| |||||||||||||||||||||| ||||||    
T  29663288 gacagtgatattttctgtaagggcatgtttgtttcggcattgccgtt 29663242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 45 - 186
Target Start/End: Complemental strand, 16622869 - 16622729
Alignment:
Q  45 taatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtgatattttctggaagggcatgtttgtttc 144  Q
    |||||||||||||||||||||| || | |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16622869 taatgtgtcttgttgcttaagttttgt-tttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattttctgtaagggcatgtttgtttc 16622771  T
Q  145 ggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  16622770 ggcatcgccgttattaataaaaatcgtcgtttctttcacgac 16622729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 7075058 - 7075228
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  7075058 cattccttcgatcatgcatgtttccgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 7075156  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgac 186  Q
    |||||||||| |||||||||||||||||||||| |||||| || ||| |||||| |||||||||||| ||||    
T  7075157 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaattgtcgtttctttcgcgac 7075228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 32441007 - 32441171
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||    
T  32441007 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 32441106  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaatcgtcgtttctttcacgac 186  Q
    |||| |||||||||||||||||||||| |||||| || ||||||||| |||||||||||||||||    
T  32441107 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattgtcgtttctttcacgac 32441171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 4418765 - 4418936
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||| || | ||||||||  |||||||| ||||||||||||||||| |||||| ||||    
T  4418765 cattccttcaatcatgcatgtttccgagtaatgcgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 4418864  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgac 186  Q
    |||||||||| |||||| ||||||||||||||| |||||| || ||| |||||| |||||||||||||||||    
T  4418865 atattttctgtaagggcgtgtttgtttcggcattgccgttgattaataaaaaattgtcgtttctttcacgac 4418936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 5468831 - 5468969
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  5468831 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 5468929  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  5468930 atattttctgtaagggcatgtttgtttcggcattgccgtt 5468969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 8213584 - 8213722
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  8213584 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 8213682  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  8213683 atattttctgtaagggcatgtttgtttcggcattgccgtt 8213722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 10397979 - 10398117
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  10397979 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 10398077  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  10398078 atattttctgtaagggcatgtttgtttcggcattgccgtt 10398117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 18244585 - 18244723
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  18244585 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 18244683  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  18244684 atattttctgtaagggcatgtttgtttcggcattgccgtt 18244723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 20575259 - 20575089
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  20575259 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 20575161  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaa-atcgtcgtttctttcacgac 186  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||||  |||||||||||| ||||||    
T  20575160 atattttctgtaagggcatgtttgtttcggcattgccgttgattaataaaatttcgtcgtttcttccacgac 20575089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 28023121 - 28023259
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  28023121 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 28023219  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  28023220 atattttctgtaagggcatgtttgtttcggcattgccgtt 28023259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 28114366 - 28114196
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| ||||||||||||| ||||||||||| |||||||||||||| || | ||||||||  |||||||| ||||||||||||||||| | |||| ||||    
T  28114366 cattccttcaatcatgcatatttccgagtaacgtgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaatgcgagagtg 28114267  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaatcgtcgtttctttcacgac 186  Q
    |||||||||| |||||| ||||||||||||||| |||||| || ||||||||| |||||||||||||||||    
T  28114266 atattttctgtaagggcgtgtttgtttcggcattgccgttgatgaataaaaattgtcgtttctttcacgac 28114196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 5594576 - 5594424
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  5594576 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaatcat 5594479  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  5594478 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 5594424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 216 - 369
Target Start/End: Original strand, 7998601 - 7998752
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  7998601 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaatcat 7998698  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 369  Q
    | ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  7998699 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 7998752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 29663187 - 29663037
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  29663187 cttggaaataatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaat--ctctttctaaaatcat 29663092  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  29663091 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 29663037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 4345099 - 4344961
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  4345099 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 4345001  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  4345000 atattttctgtaagggcatgtttgtttcggcattgccgtt 4344961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 5594769 - 5594631
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  5594769 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 5594671  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  5594670 atattttctgtaagggcatgtttgtttcggcattgccgtt 5594631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 5607734 - 5607596
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| |||||||||||| |||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||||||||    
T  5607734 cattccttcaatcatgcatgtttctgagtaatgtgtcctgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgaaagtg 5607636  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  5607635 atattttctgtaagggcatgtttgtttcggcattgccgtt 5607596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 216 - 372
Target Start/End: Complemental strand, 11108571 - 11108417
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  11108571 cttggaaacaatggtaatgccagaaaaaaccaaaacgtttgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaatcat 11108474  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatg 372  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  11108473 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcctatg 11108417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 11108761 - 11108623
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  11108761 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 11108663  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  11108662 atattttctgtaagggcatgtttgtttcggcattgccgtt 11108623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 21676539 - 21676677
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  21676539 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 21676637  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  21676638 atattttctgtaagggcatgtttgtttcggcattgccgtt 21676677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 22869268 - 22869130
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| |||||| |||||||||| |||||| ||||    
T  22869268 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctcccgctctgcccaaagcgagagtg 22869170  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  22869169 atattttctgtaagggcatgtttgtttcggcattgccgtt 22869130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 22884327 - 22884189
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| |||||| |||||||||| |||||| ||||    
T  22884327 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctcccgctctgcccaaagcgagagtg 22884229  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  22884228 atattttctgtaagggcatgtttgtttcggcattgccgtt 22884189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 24330005 - 24330143
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  24330005 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 24330103  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  24330104 atattttctgtaagggcatgtttgtttcggcattgccgtt 24330143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 31962885 - 31962746
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || ||||||||  |||||||| ||||||||||||||||| |||||| ||||    
T  31962885 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 31962786  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  31962785 atattttctgtaagggcatgtttgtttcggcattgccgtt 31962746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 36995612 - 36995474
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  36995612 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 36995514  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  36995513 atattttctgtaagggcatgtttgtttcggcattgccgtt 36995474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 47025299 - 47025437
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  47025299 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 47025397  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  47025398 atattttctgtaagggcatgtttgtttcggcattgccgtt 47025437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 48467773 - 48467911
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  48467773 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 48467871  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  48467872 atattttctgtaagggcatgtttgtttcggcattgccgtt 48467911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 51783868 - 51784006
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  51783868 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 51783966  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  51783967 atattttctgtaagggcatgtttgtttcggcattgccgtt 51784006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 8287876 - 8287711
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||| ||||||||| ||||||||||||||||| |||||| ||||||||||    
T  8287876 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 8287777  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgac 186  Q
    |||| |||||||||||||||||||||| |||||| || ||| |||||| |||||||||||||||||    
T  8287776 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaattgtcgtttctttcacgac 8287711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 7075252 - 7075402
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  7075252 cttggaaaaaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaa--ctctttctaaaatcat 7075347  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  7075348 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 7075402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 8213777 - 8213928
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  8213777 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaagaaaaa-ctctttctaaaatcat 8213873  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  8213874 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 8213928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 17983361 - 17983230
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtgatatttt 123  Q
    ||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| |||||||||||    
T  17983361 tcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 17983263  T
Q  124 ctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    ||| |||||||||||||||||||||| ||||||    
T  17983262 ctgtaagggcatgtttgtttcggcattgccgtt 17983230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 20067896 - 20068060
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtgatatttt 123  Q
    ||||||||||||||||| ||||||| |  |||||||||| ||| | ||||||||||||||||| ||||||||||||||||| |||||| |||||||||||    
T  20067896 tcaatcatgcatgtttctgagtaatataccttgttgcttgagtatcttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 20067995  T
Q  124 ctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgac 186  Q
    ||| |||||||||||||||||||||| |||||| || ||| |||||| |||||||| ||||||||    
T  20067996 ctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaattgtcgtttccttcacgac 20068060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 5469029 - 5469181
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||          || |||||||||||||    
T  5469029 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-tttttcttattaatttcaaaaatctgcatg-aaaaaaaaactatttctaaaatcat 5469126  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  5469127 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 5469181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 7998408 - 7998546
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  7998408 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 7998506  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    || ||||||| |||||||||||||||||||||| ||||||    
T  7998507 atgttttctgtaagggcatgtttgtttcggcattgccgtt 7998546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 15739499 - 15739333
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt--caaaataaccatcctctcgctctgcccgaagcgaaagtgatatt 121  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||||  ||||||||| ||||||||||||||||| |||||| |||||||||    
T  15739499 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatt 15739400  T
Q  122 ttctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgac 186  Q
    ||||| |||||||||||||||||||||| |||||| || ||| |||||| |||||||||||||||||    
T  15739399 ttctgtaagggcatgtttgtttcggcattgccgttgattaatgaaaaattgtcgtttctttcacgac 15739333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 18227037 - 18227175
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| ||||||||||||||||||  |||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  18227037 cattccttcaatcatgcatgtttctaagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 18227135  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  18227136 atattttctgtaagggcatgtttgtttcggcattgccgtt 18227175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 216 - 372
Target Start/End: Original strand, 4418957 - 4419110
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  4418957 cttggaaaaaatggtaatgccagaaaaaaccaaaacatctgtatttt--cttattaatttcaaaaatctgcatgaaaaaacaa-ctctttctaaaatcat 4419053  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatg 372  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  4419054 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcctatg 4419110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 17983169 - 17983016
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn-ctctttctaaaatca 314  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||           |||||||||||||||    
T  17983169 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaaatca 17983072  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  17983071 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 17983016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 6203759 - 6203924
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||| ||||||||||||||||| ||||||  |||||||||    
T  6203759 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagggtgatattt 6203858  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgac 186  Q
    |||| |||||||||||||||||||||| |||||| || ||| |||||| |||||||||||||||||    
T  6203859 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaattgtcgtttctttcacgac 6203924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 5015757 - 5015907
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||          |||||||||||| |||    
T  5015757 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatg--aaaaaaaactctttctaaaaccat 5015852  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  5015853 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 5015907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 10644923 - 10645054
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtgatatttt 123  Q
    ||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| |||||||||||    
T  10644923 tcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 10645021  T
Q  124 ctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    ||| || ||||||||||||||||||| ||||||    
T  10645022 ctgtaaaggcatgtttgtttcggcattgccgtt 10645054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 4795037 - 4794871
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||| ||||||||| ||||||||||||||||| |||||| ||||||||||    
T  4795037 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 4794938  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgac 186  Q
    |||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| ||||||    
T  4794937 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgac 4794871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 28341025 - 28341164
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| |||||||| |||||||||||| || | ||||||||  |||||||| ||||||||||||||||| || ||| ||||    
T  28341025 cattccttcaatcatgcatgtttctgagtaatgcgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaaacgagagtg 28341124  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  28341125 atattttctgtaagggcatgtttgtttcggcattgccgtt 28341164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 35882619 - 35882785
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||    
T  35882619 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 35882718  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgac 186  Q
    |||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| ||||||    
T  35882719 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgac 35882785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 51784064 - 51784216
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||          || |||||||||||||    
T  51784064 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-tttttcttattaatttcaaaaatctgcatg-aaaaagaaactatttctaaaatcat 51784161  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | |||||||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  51784162 ccaatcattatatgcaggctgaaccataataaacccgttgaacacagtaatccta 51784216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 18244779 - 18244934
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn---ctctttctaaaat 312  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||             |||||||||||||    
T  18244779 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaaactctttctaaaat 18244876  T
Q  313 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  18244877 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 18244934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 18332481 - 18332646
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtgatatttt 123  Q
    ||||||||||||||||| ||||||| |  |||||||||| ||| | ||||||||||||||||| ||| ||||||||||||| |||||| |||||||||||    
T  18332481 tcaatcatgcatgtttctgagtaatataccttgttgcttgagtatcttgtttttcaaaataacaatcatctcgctctgcccaaagcgagagtgatatttt 18332580  T
Q  124 ctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgac 186  Q
    ||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| ||||||    
T  18332581 ctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgac 18332646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 20575063 - 20574910
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn-ctctttctaaaatca 314  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||           |||||||||||||||    
T  20575063 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaaatca 20574966  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    || ||||||||||||| | |||||||||||||||||| ||||||||||||||||||    
T  20574965 tccaatcattatatgctggttgaaccataataaacccgttgaacacagtaatccta 20574910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 8297825 - 8297990
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||| ||| |||| |||||||| |||||| ||||||||||    
T  8297825 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcatctcactctgcccaaagcgagagtgatattt 8297924  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgac 186  Q
    |||| |||||||||||||||||||||| |||||| || ||| |||||| |||||||||||||||||    
T  8297925 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaattgtcgtttctttcacgac 8297990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 18275457 - 18275325
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtgatatttt 123  Q
    ||||||||||||||||| ||||||| |  |||||||||| |||   ||||||||||||||||| ||||||||||||||||| |||||| |||||||||||    
T  18275457 tcaatcatgcatgtttctgagtaatataccttgttgcttgagtaccttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 18275358  T
Q  124 ctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    ||| |||||||||||||||||||||| ||||||    
T  18275357 ctgtaagggcatgtttgtttcggcattgccgtt 18275325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 18290758 - 18290626
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtgatatttt 123  Q
    ||||||||||||||||| ||||||| |  |||||||||| |||   ||||||||||||||||| ||||||||||||||||| |||||| |||||||||||    
T  18290758 tcaatcatgcatgtttctgagtaatataccttgttgcttgagtaccttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 18290659  T
Q  124 ctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    ||| |||||||||||||||||||||| ||||||    
T  18290658 ctgtaagggcatgtttgtttcggcattgccgtt 18290626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 18306059 - 18305927
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtgatatttt 123  Q
    ||||||||||||||||| ||||||| |  |||||||||| |||   ||||||||||||||||| ||||||||||||||||| |||||| |||||||||||    
T  18306059 tcaatcatgcatgtttctgagtaatataccttgttgcttgagtaccttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 18305960  T
Q  124 ctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    ||| |||||||||||||||||||||| ||||||    
T  18305959 ctgtaagggcatgtttgtttcggcattgccgtt 18305927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 36995419 - 36995265
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn--ctctttctaaaatc 313  Q
    ||||||||  |||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||            ||||||||||||||    
T  36995419 cttggaaacgatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaactctttctaaaatc 36995322  T
Q  314 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  36995321 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 36995265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 5015558 - 5015696
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||| ||||||||||||| ||| || ||||    
T  5015558 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcatctcgctctgcccaaagagagagtg 5015656  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||| ||||||||||||||| ||||||    
T  5015657 atattttctgtaagggcgtgtttgtttcggcattgccgtt 5015696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 48467967 - 48468120
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaa-ccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatca 314  Q
    |||||||| ||||||||| |||||||||| ||||||||| ||||||||  ||||||||||||||||||| |||||          |||||||||||||||    
T  48467967 cttggaaacaatggtaatgccagaaaaaaaccaaaacgtttgtatttt--cttattaatttcaaaaatccgcatgaaaaaaaaaactctttctaaaatca 48468064  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  48468065 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 48468120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 4723484 - 4723649
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||| ||| ||||||||||||| |||||| | ||||||||    
T  4723484 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcatctcgctctgcccaaagcgagaatgatattt 4723583  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgac 186  Q
    |||  |||||||||||||||||||||| |||||| || ||| |||||| |||||||||||||||||    
T  4723584 tctataagggcatgtttgtttcggcattgccgttgattaataaaaaattgtcgtttctttcacgac 4723649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 28114172 - 28114021
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| |||||||||||||||  |||||||||||  |||||||||||||||||||||||||          | ||||||||||||||    
T  28114172 cttggaaaaaatggtaatgccagaaaaaaccaaacagtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaacaacc-ctttctaaaatcat 28114076  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  28114075 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 28114021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 10645112 - 10645266
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn--ctctttctaaaatc 313  Q
    |||||||| ||||||||| ||||||||||||||||| | ||||||||  |||||||||||||||||||||||||            ||||||||||||||    
T  10645112 cttggaaacaatggtaatgccagaaaaaaccaaaacatttgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaactctttctaaaatc 10645209  T
Q  314 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  10645210 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 10645266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 21676733 - 21676896
Alignment:
Q  216 cttggaaataatggtaataccagaaaa-aaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg--------nnnnnnnnnnctctttc 306  Q
    |||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||                  |||||||    
T  21676733 cttggaaacaatggtaatgccagaaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaaaactctttc 21676832  T
Q  307 taaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  21676833 taaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 21676896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 15891111 - 15890945
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||  ||||||| |  |||||||||||||| | |||||||| ||||||||| ||||||||||||| ||| |||||| ||||||||||    
T  15891111 tcaatcatgcatgtttttgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctacccaaagcgagagtgatattt 15891012  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat--aaaaatcgtcgtttctttcacgac 186  Q
    |||| |||||||||||||||||||||| | |||| || |||  |||||| |||||||||||||||||    
T  15891011 tctgtaagggcatgtttgtttcggcattgtcgttaattaataaaaaaattgtcgtttctttcacgac 15890945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 216 - 367
Target Start/End: Complemental strand, 22869072 - 22868918
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn-----ctctttctaaa 310  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||               |||||||||||    
T  22869072 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaagaaaaaaaaactctttctaaa 22868975  T
Q  311 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatc 367  Q
    |||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  22868974 atcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatc 22868918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 216 - 367
Target Start/End: Complemental strand, 22884131 - 22883977
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn-----ctctttctaaa 310  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||               |||||||||||    
T  22884131 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaagaaaaaaaaactctttctaaa 22884034  T
Q  311 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatc 367  Q
    |||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  22884033 atcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatc 22883977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 29147160 - 29146994
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||| ||||||||| ||||||| ||||||||| |||||| ||||||||||    
T  29147160 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctcttgctctgcccaaagcgagagtgatattt 29147061  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgac 186  Q
    |||| |||||||||||||||||||||| ||| || || ||||||||  | |||||||||| ||||||    
T  29147060 tctgtaagggcatgtttgtttcggcattgccattgattaataaaaattttgtcgtttcttccacgac 29146994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 47025492 - 47025646
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaa-ccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn-ctctttctaaaatc 313  Q
    |||||||| ||||||||| |||||||||| ||||||||||||||||||  |||||||||||||||||||||||||           ||||||||||||||    
T  47025492 cttggaaacaatggtaatgccagaaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaaatc 47025589  T
Q  314 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||| || |||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  47025590 atccaagcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 47025646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 18227232 - 18227389
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn-----ctctttctaaa 310  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||| |||||||               |||||||||||    
T  18227232 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaacctgcatgaaaaaaaaaaaaaaactctttctaaa 18227329  T
Q  311 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  18227330 atcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 18227389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 28023318 - 28023475
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn-----ctctttctaaa 310  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||               || ||||||||    
T  28023318 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaactttttctaaa 28023415  T
Q  311 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  28023416 atcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 28023475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 24330199 - 24330356
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaa-ccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn----ctctttctaaa 310  Q
    |||||||| ||||||||| |||||||||| ||||||||||||||||||  |||||||||||||||||||||||||              |||||||||||    
T  24330199 cttggaaacaatggtaatgccagaaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaaaactctttctaaa 24330296  T
Q  311 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  24330297 atcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 24330356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 18053115 - 18053281
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    |||| |||||||||||| ||||||| |   ||||||||||||| | ||||||| |||||||||| ||| ||||||||||||| |||||| ||||||||||    
T  18053115 tcaaccatgcatgtttctgagtaatatacgttgttgcttaagtatcttgttttttcaaaataacaatcttctcgctctgcccaaagcgagagtgatattt 18053214  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgac 186  Q
    |||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| ||||||    
T  18053215 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaatttgtcgtttcttccacgac 18053281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 22385983 - 22385849
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt--caaaataaccatcctctcgctctgcccgaagcgaaagtgatatt 121  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||||  ||||||||| ||| ||||||||||||| |||||| |||||||||    
T  22385983 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttttcaaaataacaatcatctcgctctgcccaaagcgagagtgatatt 22385884  T
Q  122 ttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    ||||| |||||||||||||||||| ||| ||||||    
T  22385883 ttctgtaagggcatgtttgtttcgacattgccgtt 22385849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 28341219 - 28341370
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| |||||||||||||||| |||||||||||  |||||||||||||||| ||||||||          ||||||||||||||||    
T  28341219 cttggaaacaatggtaatgccagaaaaaaccaaaatgtctgtatttt--cttattaatttcaaaa-tctgcatgaaaaaaaaa-ctctttctaaaatcat 28341314  T
Q  316 ctaa-tcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | || ||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  28341315 ccaaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 28341370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 4344904 - 4344743
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn---------ctctttc 306  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||                   |||||||    
T  4344904 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaaaaactctttc 4344807  T
Q  307 taaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||||||  ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  4344806 taaaatcatacaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 4344743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 10398173 - 10398337
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn------------ctct 303  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||                      ||||    
T  10398173 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaaaaaaaactct 10398270  T
Q  304 ttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  10398271 ttctaaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 10398337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 216 - 365
Target Start/End: Original strand, 8298015 - 8298159
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||           ||||||||||||||||    
T  8298015 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta-tttttcttattaatttcaaaaatctgcat----aaaaaccctctttctaaaatcat 8298109  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  8298110 ccaaccattttacgcagattgaactataataaacccgttgggcacagtaa 8298159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 216 - 365
Target Start/End: Original strand, 32441195 - 32441339
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||           ||||||||||||||||    
T  32441195 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta-tttttcttattaatttcaaaaatctgcat----aaaaaccctctttctaaaatcat 32441289  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  32441290 ccaaccattttacgcagattgaactataataaacccgttgggcacagtaa 32441339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 5607539 - 5607381
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn------ctctttctaa 309  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||| ||||||||                ||||||||||    
T  5607539 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaa-tctgcatgaaaaaaaaaaaaaaaactctttctaa 5607443  T
Q  310 aatcatctaa-tcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||||| || ||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  5607442 aatcatccaaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 5607381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 216 - 369
Target Start/End: Original strand, 4723675 - 4723823
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||  ||||||  ||||||||||||||||||||||||||||           ||||||||||||||||    
T  4723675 cttggaaataatggtaatgccagaaaaaaccaaaatatctgta--ttttcttattaatttcaaaaatctgcat---aaaaaaccctctttctaaaatcat 4723769  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 369  Q
    | || |||| || ||||||||||| ||||||||||| |||  ||||||||||||    
T  4723770 ccaaccattttacgcagattgaactataataaacccgttgggcacagtaatcct 4723823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 216 - 365
Target Start/End: Original strand, 6203948 - 6204091
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||           ||||||||||||||||    
T  6203948 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat----aaaaaccctctttctaaaatcat 6204041  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  6204042 ccaaccattttacgcagattgaactataataaacccgttgggcacagtaa 6204091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 216 - 365
Target Start/End: Complemental strand, 15890922 - 15890777
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||           ||||||||||||||||    
T  15890922 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat--aaaaaaaacctctttctaaaatcat 15890827  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  15890826 ccaaccattttacgcagattgaactataataaacccgttgggcacagtaa 15890777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 216 - 369
Target Start/End: Original strand, 20068085 - 20068232
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||           ||||||||||||||||    
T  20068085 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat----aaaaaccctctttctaaaatcat 20068178  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 369  Q
    | || |||| || ||||||||||| ||||| ||||| |||  ||||||||||||    
T  20068179 ccaaccattttacgcagattgaactataatgaacccgttgggcacagtaatcct 20068232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 369
Target Start/End: Complemental strand, 4794849 - 4794703
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||||||  ||||||||||||||||||||||||           ||| ||||||||||||    
T  4794849 cttggaaataatggtaatgcca-aaaaaaccaaaacatctgtatttt--cttattaatttcaaaaatctgcat----aaaaaacctccttctaaaatcat 4794757  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 369  Q
    | ||||||| || ||||||||||| ||||||||||| |||  ||||||||||||    
T  4794756 ccaatcattttacgcagattgaactataataaacccgttgggcacagtaatcct 4794703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 365
Target Start/End: Complemental strand, 8287686 - 8287542
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||||| |||||||||||           ||||||||||||||||    
T  8287686 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcgaaaatctgcat---aaaaaaacctctttctaaaatcat 8287592  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | || |||| || |||||||| || ||||||||||| ||| |||||||||    
T  8287591 ccaaccattttacgcagattggactataataaacccgttggacacagtaa 8287542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 365
Target Start/End: Complemental strand, 22385793 - 22385650
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||||||||||| |||||           ||||||||||||||||    
T  22385793 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatatgcat----aaaacccctctttctaaaatcat 22385700  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  22385699 ccaaccattttacgcagattgaactataataaacccgttgggcacagtaa 22385650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 365
Target Start/End: Original strand, 35882811 - 35882954
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||  ||||||||||||||||||||||||||||           ||||||||||||||||    
T  35882811 cttggaaataatggtaatgccaaaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat----aaaaaacctctttctaaaatcat 35882904  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  35882905 ccaaccattttacgcagattgaactataataaacccgttgggcacagtaa 35882954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 19696534 - 19696684
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttc---aaaaatctgcatgnnnnnnnnnnctctttctaaaat 312  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||   ||||||||||||           |||||||||||||    
T  19696534 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaaaaatctgcat-----aaaaacctctttctaaaat 19696626  T
Q  313 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||| || |||| || ||||||||||||||||||||||| |||  |||||||| ||||    
T  19696627 catccaaccattttacgcagattgaaccataataaacccgttgggcacagtaacccta 19696684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 18275266 - 18275198
Alignment:
Q  219 ggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 288  Q
    ||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18275266 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgtat-ttttcttattaatttcaaaaatctgcat 18275198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 18290567 - 18290499
Alignment:
Q  219 ggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 288  Q
    ||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18290567 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgtat-ttttcttattaatttcaaaaatctgcat 18290499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 18305868 - 18305800
Alignment:
Q  219 ggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 288  Q
    ||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18305868 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgtat-ttttcttattaatttcaaaaatctgcat 18305800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 218 - 370
Target Start/End: Original strand, 5653273 - 5653418
Alignment:
Q  218 tggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaa-tctgcatgnnnnnnnnnnctctttctaaaatcatc 316  Q
    |||||||||||||||| ||||||||||||||||  ||||||||||  ||||||||||||||||| |||||||           |||||||||||||||||    
T  5653273 tggaaataatggtaatgccagaaaaaaccaaaaa-tctgtatttt--cttattaatttcaaaaaatctgcat-----aaaaacctctttctaaaatcatc 5653364  T
Q  317 taatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
     || |||| || ||||||||| ||||||||||||| ||||||||||||| ||||    
T  5653365 caaccattttacgcagattgagccataataaacccgttgaacacagtaacccta 5653418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 216 - 365
Target Start/End: Complemental strand, 15739309 - 15739166
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||||||||||||| |||           ||||||||||||||||    
T  15739309 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctacat----aaaaaccctctttctaaaatcat 15739216  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | || |||| || |||||| |||| ||||||||||| |||  ||||||||    
T  15739215 ccaaccattttacgcagatcgaactataataaacccgttgggcacagtaa 15739166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 216 - 365
Target Start/End: Complemental strand, 29146971 - 29146828
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    ||||||||| |||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||           ||||||||||||||||    
T  29146971 cttggaaatgatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat----aaaaaccctctttctaaaatcat 29146878  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | || | || || ||||||||||| ||||||||||| |||  ||||||||    
T  29146877 ccaaccgttttacgcagattgaactataataaacccgttgggcacagtaa 29146828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 300 - 369
Target Start/End: Complemental strand, 31962593 - 31962523
Alignment:
Q  300 ctctttctaaaa-tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 369  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  31962593 ctctttctaaaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 31962523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 31962688 - 31962617
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg 289  Q
    |||||||| ||||||||| |||||||||||||||| |||||||  |||||||||||||||||||||||||||||    
T  31962688 cttggaaacaatggtaatgccagaaaaaaccaaaatgtctgta--ttttcttattaatttcaaaaatctgcatg 31962617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 217 - 370
Target Start/End: Original strand, 4626837 - 4626994
Alignment:
Q  217 ttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat-----gnnnnnnnnnnctctttctaaaa 311  Q
    ||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||     |          |  |||||||||    
T  4626837 ttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaaagaaaaaaaaaccattttctaaaa 4626935  T
Q  312 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  4626936 tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 4626994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 31033444 - 31033287
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat----gnnnnnnnnnnctctttctaaaa 311  Q
    |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||               |  |||||||||    
T  31033444 cttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcatagaaaaaaaaaaaaccattttctaaaa 31033346  T
Q  312 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  31033345 tcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 31033287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 216 - 365
Target Start/End: Original strand, 18053303 - 18053450
Alignment:
Q  216 cttggaaataatggtaataccag-aaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatca 314  Q
    |||||||||||||||||| |||| ||||||||||||| ||  ||| ||||||||||||||| ||||||||||||           ||| |||||||||||    
T  18053303 cttggaaataatggtaatgccagaaaaaaaccaaaacatc--tatattttcttattaattttaaaaatctgcat-aaaaaaaaacctccttctaaaatca 18053399  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    || ||||||| || ||||||||||| ||||||||||| |||  ||||||||    
T  18053400 tccaatcattttacgcagattgaactataataaacccgttgggcacagtaa 18053450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 5714120 - 5714191
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 288  Q
    |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    
T  5714120 cttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcat 5714191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 5725030 - 5725101
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 288  Q
    |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    
T  5725030 cttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcat 5725101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 288
Target Start/End: Complemental strand, 5767338 - 5767267
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 288  Q
    |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    
T  5767338 cttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcat 5767267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 288
Target Start/End: Complemental strand, 17993143 - 17993072
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 288  Q
    |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    
T  17993143 cttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcat 17993072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 32293677 - 32293748
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 288  Q
    |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    
T  32293677 cttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcat 32293748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 303 - 370
Target Start/End: Original strand, 5714215 - 5714282
Alignment:
Q  303 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  5714215 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 5714282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 303 - 370
Target Start/End: Original strand, 5725125 - 5725192
Alignment:
Q  303 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  5725125 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 5725192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 303 - 370
Target Start/End: Complemental strand, 5767243 - 5767176
Alignment:
Q  303 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  5767243 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 5767176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 303 - 370
Target Start/End: Complemental strand, 17993049 - 17992982
Alignment:
Q  303 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  17993049 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 17992982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 303 - 370
Target Start/End: Original strand, 32293770 - 32293837
Alignment:
Q  303 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  32293770 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 32293837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #118
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 18532429 - 18532498
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 288  Q
    |||||||||||||||||| |||||||||||| |||| ||||||  ||||||||||||||||||| ||||||||    
T  18532429 cttggaaataatggtaatgccagaaaaaacc-aaacatctgta--ttttcttattaatttcaaatatctgcat 18532498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #119
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 281
Target Start/End: Complemental strand, 16622703 - 16622643
Alignment:
Q  219 ggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaa 281  Q
    ||||||||||||||| ||||||||||||||||| ||  ||| |||||||||||||||||||||    
T  16622703 ggaaataatggtaatgccagaaaaaaccaaaacatc--tatattttcttattaatttcaaaaa 16622643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #120
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 18332668 - 18332739
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaa-tttcaaaaatctgcat 288  Q
    |||||||||||||||||| ||||||||||||||||  ||||||  |||||||||||| ||| ||||||||||||    
T  18332668 cttggaaataatggtaatgccagaaaaaaccaaaatatctgta--ttttcttattaattttgaaaaatctgcat 18332739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #121
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 365
Target Start/End: Original strand, 18332760 - 18332825
Alignment:
Q  300 ctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    ||||||||||||||||| ||||||| || ||||||||||| ||||| ||||| |||  ||||||||    
T  18332760 ctctttctaaaatcatccaatcattttacgcagattgaactataatgaacccgttgggcacagtaa 18332825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #122
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 16625013 - 16624978
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgt 52  Q
    ||||| ||||||||||||||||||||||||||||||    
T  16625013 cattccttcaatcatgcatgtttccgagtaatgtgt 16624978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #123
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 367
Target Start/End: Complemental strand, 6540845 - 6540812
Alignment:
Q  334 ttgaaccataataaacccattgaacacagtaatc 367  Q
    |||||||||||||||||| |||||||||||||||    
T  6540845 ttgaaccataataaacccgttgaacacagtaatc 6540812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 148; Significance: 5e-78; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 16206402 - 16206235
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16206402 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 16206303  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacg 184  Q
    |||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  16206302 atattttctgtaagggcatgtttgtttcggcatcgtcgttattaataaaaatcgtcgtttctttcacg 16206235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 28152624 - 28152798
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28152624 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 28152723  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  28152724 aaagtgata-tttctggaagggcgtgtttgtttcggcatcgccgttattaataaaaattgtcgtttctttcacgac 28152798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 20462865 - 20463031
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |  | |||||||||||||| |||||||||||||||||||||||||||||    
T  20462865 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtttcgt-tttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 20462963  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacg 184  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20462964 atattttctgtaagggcatgtttgtttcggcatcgccgttattaataaaaatcgtcgtttctttcacg 20463031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 20339822 - 20339656
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| ||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20339822 cattccttcaatcatgcatgtttccgaataatgtgtcttgttgattaaatgttttgtttttcaaaataaccatcctctcgctcggcccgaagcgaaagtg 20339723  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacg 184  Q
    ||| ||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||    
T  20339722 ata-tttctggaagggcgtgtttgtttcggcattcccgttatcaataaaaatcgtcgtttctttcacg 20339656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 41791679 - 41791509
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  41791679 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 41791581  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt--atcaataaaaatcgtcgtttctttcacgac 186  Q
    |||||||||| |||||| ||||||||||||||| ||||||  || ||||||||| |||||||||| ||||||    
T  41791580 atattttctgtaagggcgtgtttgtttcggcattgccgtttgatgaataaaaattgtcgtttcttccacgac 41791509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 216 - 372
Target Start/End: Complemental strand, 41791486 - 41791332
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  41791486 cttggaaacaatggtaatgccagaaaaaaccaaaacatctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaacaactctttctaaaatcat 41791389  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatg 372  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  41791388 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcctatg 41791332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 23 - 156
Target Start/End: Original strand, 10946969 - 10947101
Alignment:
Q  23 ttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||||||||    
T  10946969 ttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtgatattt 10947067  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||| |||||||||||||||||||||| ||||||    
T  10947068 tctgtaagggcatgtttgtttcggcattgccgtt 10947101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 10964749 - 10964899
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  10964749 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaa--ctctttctaaaatcat 10964844  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  10964845 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 10964899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 10947158 - 10947311
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaa-ccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatca 314  Q
    |||||||| ||||||||| |||||||||| ||||||||||||||||||  |||||||||||||||||||||||||          |||||||||||||||    
T  10947158 cttggaaacaatggtaatgccagaaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaatca 10947255  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  10947256 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 10947311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 28586865 - 28587004
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  28586865 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 28586963  T
Q  117 atattttctg-gaagggcatgtttgtttcggcatcgccgtt 156  Q
    ||||||||||  |||||||||||||||||||||| ||||||    
T  28586964 atattttctgtaaagggcatgtttgtttcggcattgccgtt 28587004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 51640109 - 51640240
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtgatatttt 123  Q
    ||||||||||||||||| |||||||||||||||||||||   || |||||||| ||||||||| ||||||||||||||||| |||||| |||||||||||    
T  51640109 tcaatcatgcatgtttctgagtaatgtgtcttgttgctttgatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 51640207  T
Q  124 ctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    ||| |||||||||||||||||||||| ||||||    
T  51640208 ctgtaagggcatgtttgtttcggcattgccgtt 51640240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 10964561 - 10964692
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtgatatttt 123  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| || ||||| ||||||||| |||||| |||||||||| ||||||  ||||||||||    
T  10964561 tcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgcttcgtttt-caaaataacaatcctcccgctctgcccaaagcgagggtgatatttt 10964659  T
Q  124 ctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    ||| |||||||||||||||||||||| ||||||    
T  10964660 ctgtaagggcatgtttgtttcggcattgccgtt 10964692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 28587065 - 28587219
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctc--tttctaaaatc 313  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||            |  |||||||||||    
T  28587065 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaccattttctaaaatc 28587162  T
Q  314 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  28587163 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 28587219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 51640295 - 51640452
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn-----ctctttctaaa 310  Q
    |||||||| ||||||||| ||||||||||||||||| | ||||||||  |||||||||||||||||||||||||               |||||||||||    
T  51640295 cttggaaacaatggtaatgccagaaaaaaccaaaacatttgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaactctttctaaa 51640392  T
Q  311 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  51640393 atcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 51640452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 20339620 - 20339467
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaattt----caaaaatctgcatgnnnnnnnnnnctctttctaaaa 311  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||     ||||||||||||           ||||||||||||    
T  20339620 cttggaaataatggtaataccagaaaaaaccaaaacatctgtatttttt-ttattaatttaaaaaaaaaatctgcat----aaaaaacctctttctaaaa 20339526  T
Q  312 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||| || |||| || ||||||||||||||||||||||| ||||||||||||| ||||    
T  20339525 tcatccaaccattttacgcagattgaaccataataaacccgttgaacacagtaacccta 20339467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 281
Target Start/End: Complemental strand, 16206205 - 16206142
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaa 281  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||||||||||    
T  16206205 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaa 16206142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 219 - 370
Target Start/End: Original strand, 28152838 - 28152986
Alignment:
Q  219 ggaaataatggtaataccagaaaaaa-ccaaaacgtctgtattttttcttattaatttcaaaaa--tctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    ||||||||||||||| |||||||||| ||||||| ||||||||||  |||||||||||||||||  |||||||           |  |||||||||||||    
T  28152838 ggaaataatggtaatgccagaaaaaaaccaaaacatctgtatttt--cttattaatttcaaaaaaatctgcat----aaaaaaccattttctaaaatcat 28152931  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
      || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  28152932 tcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 28152986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 20463062 - 20463133
Alignment:
Q  216 cttggaaataatggtaataccag-aaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 288  Q
    |||||||||||||||||| |||| ||||||||||||| ||||||  |||||||||| | |||||||||||||||    
T  20463062 cttggaaataatggtaatgccagaaaaaaaccaaaacatctgta--ttttcttattgaattcaaaaatctgcat 20463133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 16206124 - 16206055
Alignment:
Q  301 tctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||||||||||||| || |||| || ||||||||| ||||||||||||| |||  |||||||| ||||    
T  16206124 tctttctaaaatcatccaaccattttacgcagattgagccataataaacccgttgggcacagtaacccta 16206055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 145; Significance: 3e-76; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 15283299 - 15283131
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15283299 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 15283200  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgttatcaat-aaaaatcgtcgtttctttcacg 184  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  15283199 atattttctgtaagggcatgtttgtttcggcatcgccgttattaataaaaaatcgtcgtttctttcacg 15283131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 24460140 - 24459964
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaa-taaccatcctctcgctctgcccgaagc 109  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  24460140 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 24460041  T
Q  110 gaaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    || |||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  24460040 gacagtgatattttctgtaagggcatgtttgtttcggcatcgccgttattaacaaaaatcgtcgtttctttcacgac 24459964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 1902165 - 1902324
Alignment:
Q  25 caatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtgatattttc 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  1902165 caatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttccaaataacaatcctctcgctctgcccgaagcgaaagtgatattttc 1902264  T
Q  125 tggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacg 184  Q
    || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1902265 tgtaagggcatgtttgtttcggcatcgccgttattaataaaaatcgtcgtttctttcacg 1902324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 15229769 - 15229941
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15229769 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 15229868  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgttatcaat-----aaaaatcgtcgtttctttcacg 184  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||     ||||||||||||||||||||||    
T  15229869 atattttctgtaagggcatgtttgtttcggcatcgccgttattaataaaaaaaaaatcgtcgtttctttcacg 15229941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 15389755 - 15389583
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||| || ||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15389755 catcaacattcctttaatcatgcataattctgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 15389656  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacg 184  Q
      ||||||| |||||| |||||  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15389655 ggagtgata-tttctgaaagggtgtgtttgtttcggcatcgccgttattaataaaaatcgtcgtttctttcacg 15389583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 54835287 - 54835459
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| || | ||||||||  |||||||| ||||||||||||||||| |||||||||||    
T  54835287 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgaaagtg 54835386  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt-atcaat--aaaaatcgtcgtttctttcacgac 186  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||  |||||| |||||||||||||||||    
T  54835387 atattttctgtaagggcatgtttgtttcggcattgccgttgatgaataaaaaaattgtcgtttctttcacgac 54835459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 5007773 - 5007944
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| || | ||||||||  |||||||| ||||||||||||||||| |||||| ||||    
T  5007773 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 5007872  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt--atcaataaaaatcgtcgtttctttcacgac 186  Q
    |||||||||| |||||| ||||||||||||||| ||||||  || ||||||||| |||||||||||||||||    
T  5007873 atattttctgtaagggcgtgtttgtttcggcattgccgtttgatgaataaaaattgtcgtttctttcacgac 5007944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 24590719 - 24590556
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtgatatttt 123  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||||||||||||| ||||||||||||||||| |||||| |||||||||||    
T  24590719 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 24590620  T
Q  124 ctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaatcgtcgtttctttcacgac 186  Q
    ||| |||||||||||||||||||||| |||||| || ||||||||| |||||||||||||||||    
T  24590619 ctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattgtcgtttctttcacgac 24590556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 34187324 - 34187161
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtgatatttt 123  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||    
T  34187324 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtattttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 34187225  T
Q  124 ctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaatcgtcgtttctttcacgac 186  Q
    ||| ||||||||||||||||| |||| |||||| || ||||||||| |||||||||||||||||    
T  34187224 ctgtaagggcatgtttgtttcagcattgccgttgattaataaaaattgtcgtttctttcacgac 34187161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 6571950 - 6572103
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  6571950 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-aaaaaaaaactctttctaaaatcat 6572048  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  6572049 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 6572103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 18798984 - 18798846
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  18798984 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 18798886  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  18798885 atattttctgtaagggcatgtttgtttcggcattgccgtt 18798846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 27161687 - 27161549
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  27161687 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 27161589  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  27161588 atattttctgtaagggcatgtttgtttcggcattgccgtt 27161549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 27161493 - 27161341
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  27161493 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaatcat 27161396  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  27161395 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 27161341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 33672169 - 33672031
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| || | |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  33672169 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagcgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 33672071  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  33672070 atattttctgtaagggcatgtttgtttcggcattgccgtt 33672031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 39852538 - 39852676
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  39852538 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 39852636  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  39852637 atattttctgtaagggcatgtttgtttcggcattgccgtt 39852676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 40104009 - 40103871
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  40104009 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 40103911  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  40103910 atattttctgtaagggcatgtttgtttcggcattgccgtt 40103871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 18798790 - 18798638
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| |||||||||||||||||||| |||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  18798790 cttggaaacaatggtaatgccagaaaaaaccaaaacgtccgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaatcat 18798693  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  18798692 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 18798638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 54835485 - 54835636
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  54835485 cttggaaa-aatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaatcat 54835581  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  54835582 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 54835636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 33671975 - 33671824
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  33671975 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaa-ctctttctaaaatcat 33671879  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  33671878 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 33671824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 39852731 - 39852882
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  39852731 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaa-ctctttctaaaatcat 39852827  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  39852828 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 39852882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 6571760 - 6571894
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt--tcaaaataaccatcctctcgctctgcccgaagcgaaagtgatatt 121  Q
    ||||||||||||||||| ||||||| |  |||||||||||||||| |||||||  |||||||||| ||||||||||||||||| ||||||||||||||||    
T  6571760 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtgtcttgtttttttcaaaataacaatcctctcgctctgcccaaagcgaaagtgatatt 6571859  T
Q  122 ttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    ||||| |||||||||||||||||||||| ||||||    
T  6571860 ttctgtaagggcatgtttgtttcggcattgccgtt 6571894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 30755654 - 30755793
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||| || | ||||||||  |||||||| ||| ||||||||||||| |||||| ||||    
T  30755654 cattccttcaatcatgcatgtgtccgagtaatgtgtcttgttgctttagcgctttgttttcaaaaataacaatcatctcgctctgcccaaagcgagagtg 30755753  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  30755754 atattttctgtaagggcatgtttgtttcggcattgccgtt 30755793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 31124889 - 31124751
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| ||||||||||||||||||  |||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  31124889 cattccttcaatcatgcatgtttctaagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 31124791  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  31124790 atattttctgtaagggcatgtttgtttcggcattgccgtt 31124751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 216 - 372
Target Start/End: Original strand, 5007968 - 5008122
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn-ctctttctaaaatca 314  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||           |||||||||||||||    
T  5007968 cttggaaa-aatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaactctctttctaaaatca 5008064  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatg 372  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  5008065 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcctatg 5008122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 14100637 - 14100788
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||          ||||||||||||||||    
T  14100637 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatg-aaaaaaaaactctttctaaaatcat 14100733  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| ||||| |||||||||||| ||||||||||||||||||    
T  14100734 ccaatcattatatgcaggttgaatcataataaacccgttgaacacagtaatccta 14100788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 14100441 - 14100579
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  14100441 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 14100539  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    || ||||||| |||||| ||||||||||||||| ||||||    
T  14100540 atgttttctgtaagggcgtgtttgtttcggcattgccgtt 14100579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 24114569 - 24114735
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||| ||||| | ||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||    
T  24114569 tcaatcatgcatgtttctgagtaatataccttgttgcctaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 24114668  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat--aaaaatcgtcgtttctttcacgac 186  Q
    |||| |||||||||||||||||||||| |||||| || |||  |||||| |||||||||||||||||    
T  24114669 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaaattgtcgtttctttcacgac 24114735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 24 - 168
Target Start/End: Original strand, 14666925 - 14667071
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||    
T  14666925 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 14667024  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaat 168  Q
    |||| |||||||||||||||||||||| |||||| || |||||||||    
T  14667025 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaat 14667071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 216 - 367
Target Start/End: Original strand, 21971795 - 21971943
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||          | ||||||||||||||    
T  21971795 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaacc-ctttctaaaatcat 21971891  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatc 367  Q
    | ||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  21971892 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatc 21971943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 21971601 - 21971739
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||| ||||||||| |||||| |||     
T  21971601 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctcttgctctgcccaaagcgagagta 21971699  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    || ||||||| |||||||||||||||||||||| ||||||    
T  21971700 atgttttctgtaagggcatgtttgtttcggcattgccgtt 21971739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 17014950 - 17015117
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||| ||||||||||||||||| |||||| | ||||||||    
T  17014950 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagattgatattt 17015049  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaat---aaaaatcgtcgtttctttcacgac 186  Q
    |||| |||||||||||||||||||||| ||| || || |||   |||||| |||||||||||||||||    
T  17015050 tctgtaagggcatgtttgtttcggcattgccattgattaataaaaaaaattgtcgtttctttcacgac 17015117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 14761668 - 14761536
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtgatatttt 123  Q
    ||||||||||||||||  ||||||| |  |||||||||| |||   ||||||||||||||||| ||||||||||||||||| |||||| |||||||||||    
T  14761668 tcaatcatgcatgtttttgagtaatataccttgttgcttgagtaccttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 14761569  T
Q  124 ctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    ||| |||||||||||||||||||||| ||||||    
T  14761568 ctgtaagggcatgtttgtttcggcattgccgtt 14761536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 40103811 - 40103661
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  40103811 cttggaaacaatggtaatgccagaaaaaaccaaaacgtttgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaa--ctctttctaaaatcat 40103716  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||  ||||||||| ||||||||||||||||||    
T  40103715 ccaatcattatatgcaggttgaaccccaataaacccgttgaacacagtaatccta 40103661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 216 - 367
Target Start/End: Original strand, 30755851 - 30756002
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaa--tctgcatgnnnnnnnnnnctctttctaaaatc 313  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||||||  |||||||||||||||||  ||||||||          ||||| ||||||||    
T  30755851 cttggaaacaatggtaatgccagaaaaaaccaaaacatctgtatttt--cttattaatttcaaaaaaatctgcatgaaaaaaaaaactcttcctaaaatc 30755948  T
Q  314 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatc 367  Q
    ||| ||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  30755949 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatc 30756002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 36342879 - 36342746
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgttttt-caaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||| |||  ||||||||| ||||||||| ||||||||||||||||| |||||| | ||||||||    
T  36342879 tcaatcatgcatgtttctgagtaatataccttgttgcttgagtactttgttttttcaaaataacaatcctctcgctctgcccaaagcgagaatgatattt 36342780  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||| |||||||||||||||||||||| ||||||    
T  36342779 tctgtaagggcatgtttgtttcggcattgccgtt 36342746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 31124692 - 31124536
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg----nnnnnnnnnnctctttctaaaa 311  Q
    |||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||              |  |||||||||    
T  31124692 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaaccattttctaaaa 31124595  T
Q  312 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||| ||||||||||||||| |||||||||||||||||| |||||||||||| |||||    
T  31124594 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtagtccta 31124536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 216 - 365
Target Start/End: Complemental strand, 34187133 - 34186989
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||           ||||||||||||||||    
T  34187133 cttggaaataatggtaatgccagaaaaaaccaaaacatctgtat-ttttcttattaatttcaaaaatctgcat----aaaaaccctctttctaaaatcat 34187039  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  34187038 ccaaccattttacgcagattgaactataataaacccgttgggcacagtaa 34186989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 216 - 369
Target Start/End: Complemental strand, 24590533 - 24590386
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||           ||| ||||||||||||    
T  24590533 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat----aaaaaacctccttctaaaatcat 24590440  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 369  Q
    | || |||| || ||||||||||| ||||||||||| |||  ||||||||||||    
T  24590439 ccaaccattttacgcagattgaactataataaacccgttgggcacagtaatcct 24590386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 216 - 351
Target Start/End: Original strand, 1902351 - 1902479
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||           ||||||||||||||||    
T  1902351 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat-----aaaaacctctttctaaaatcat 1902443  T
Q  316 ctaatcattatatgcagattgaaccataataaaccc 351  Q
    | || |||| || ||||||||| |||||||||||||    
T  1902444 ccaaccattttacgcagattgagccataataaaccc 1902479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 219 - 365
Target Start/End: Original strand, 14667116 - 14667256
Alignment:
Q  219 ggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcatcta 318  Q
    ||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||           ||||||||||||||||| |    
T  14667116 ggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat----aaaaaacctctttctaaaatcatcca 14667209  T
Q  319 atcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  14667210 accattttacgcagattgaactataataaacccgttgggcacagtaa 14667256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 288
Target Start/End: Complemental strand, 14761480 - 14761409
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 288  Q
    |||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14761480 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtat-ttttcttattaatttcaaaaatctgcat 14761409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 216 - 348
Target Start/End: Original strand, 15229969 - 15230095
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||           ||||||||||||||||    
T  15229969 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat----aaaaaacctctttctaaaatcat 15230062  T
Q  316 ctaatcattatatgcagattgaaccataataaa 348  Q
    | || |||| || ||||||||| ||||||||||    
T  15230063 ccaaccattttacgcagattgagccataataaa 15230095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 369
Target Start/End: Original strand, 24114758 - 24114906
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaa-ccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatca 314  Q
    |||||||||||||||||| |||||||||| ||||||| ||||||||||  ||||||||||||||||||||||||           |||||||||||||||    
T  24114758 cttggaaataatggtaatgccagaaaaaaaccaaaacatctgtatttt--cttattaatttcaaaaatctgcat----aaaaaccctctttctaaaatca 24114851  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 369  Q
    || || |||  || ||||||||||| ||||| ||||| |||  ||||||||||||    
T  24114852 tccaaccatcttacgcagattgaactataatgaacccgttgggcacagtaatcct 24114906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 306 - 370
Target Start/End: Complemental strand, 18315266 - 18315202
Alignment:
Q  306 ctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||||||||  ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  18315266 ctaaaatcatacaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 18315202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 281
Target Start/End: Complemental strand, 15283102 - 15283039
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaa 281  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||||||||||    
T  15283102 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaa 15283039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 216 - 365
Target Start/End: Original strand, 17015142 - 17015286
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaa-ccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatca 314  Q
    |||||||||||||||||| |||||||||| ||||||  ||||||||||  ||||||||||||||||||||||||           || ||||||||||||    
T  17015142 cttggaaataatggtaatgccagaaaaaaaccaaaatatctgtatttt--cttattaatttcaaaaatctgcat----aaaaaccctatttctaaaatca 17015235  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    || || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  17015236 tccaaccattttacgcagattgaactataataaacccgttgggcacagtaa 17015286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 288
Target Start/End: Complemental strand, 24459922 - 24459851
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 288  Q
    |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    
T  24459922 cttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcat 24459851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 369
Target Start/End: Complemental strand, 36342691 - 36342542
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaa-ccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatca 314  Q
    |||||||| ||||||||| |||||||||| ||||||||||| ||||||| ||| ||||||||||||||||||||           |||||||||||| ||    
T  36342691 cttggaaacaatggtaatgccagaaaaaaaccaaaacgtctatattttt-cttgttaatttcaaaaatctgcat----aaaaaccctctttctaaaaaca 36342597  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 369  Q
    || || |||| || ||||||||||| ||||| ||||| |||  ||||||||||||    
T  36342596 tccaaccattttacgcagattgaactataatgaacccgttgggcacagtaatcct 36342542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 303 - 370
Target Start/End: Complemental strand, 24459829 - 24459762
Alignment:
Q  303 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  24459829 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 24459762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 279
Target Start/End: Complemental strand, 15389557 - 15389495
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaa 279  Q
    |||||||||||||||||| ||||||||||||||||| ||| || ||||||||||||||| ||||    
T  15389557 cttggaaataatggtaatgccagaaaaaaccaaaacatcttta-tttttcttattaattacaaa 15389495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 372
Target Start/End: Complemental strand, 15389469 - 15389400
Alignment:
Q  303 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatg 372  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||| ||||| ||||||    
T  15389469 tttctaaaatcattcaaccattttatgcagtttgaaccataataaacccgttgaacatagtaaccctatg 15389400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 370
Target Start/End: Complemental strand, 15283022 - 15282952
Alignment:
Q  300 ctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||||||||||||||| || |||| || ||||||||| ||||| ||||||| |||  |||||||| ||||    
T  15283022 ctctttctaaaatcatccaaccattttacgcagattgagccatagtaaacccgttgggcacagtaacccta 15282952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 132; Significance: 2e-68; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 22277 - 22451
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  22277 catcaacattccttcaatcatgcataattccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagca 22376  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacgac 186  Q
    ||||||||| ||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  22377 aaagtgata-tttctggaagggcgtgtttatttcggcatcgccgttattaataaaaatcgtcgtttctttcacgac 22451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 22474 - 22627
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||| || |||||| ||||||||||||| ||||||||           |  |||||||||||||    
T  22474 cttggaaataatggtaatgccagaaaaaaccaaaacatcttta-tttttcctattaatttcaaagatctgcataaaaaaaaaacccttttctaaaatcat 22572  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
      || |||| || |||| |||||||||||||||||| ||||||||||||| ||||    
T  22573 tcaaccattttacgcagtttgaaccataataaacccgttgaacacagtaacccta 22627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 128; Significance: 4e-66; HSPs: 2)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 2145 - 1979
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| ||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2145 cattccttcaatcatgcatgtttccgaataatgtgtcttgttgattaaatgttttgtttttcaaaataaccatcctctcgctcggcccgaagcgaaagtg 2046  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacg 184  Q
    ||| ||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||    
T  2045 ata-tttctggaagggcgtgtttgtttcggcattcccgttatcaataaaaatcgtcgtttctttcacg 1979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 1943 - 1790
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaattt----caaaaatctgcatgnnnnnnnnnnctctttctaaaa 311  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||     ||||||||||||           ||||||||||||    
T  1943 cttggaaataatggtaataccagaaaaaaccaaaacatctgtatttttt-ttattaatttaaaaaaaaaatctgcat----aaaaaacctctttctaaaa 1849  T
Q  312 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||| || |||| || ||||||||||||||||||||||| ||||||||||||| ||||    
T  1848 tcatccaaccattttacgcagattgaaccataataaacccgttgaacacagtaacccta 1790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 126; Significance: 7e-65; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 119433 - 119261
Alignment:
Q  11 catcatcattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 110  Q
    ||||| ||||| |||||||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||    
T  119433 catcaacattccttcaatcatgcataattccgagtgatgtgtcttgttgcttaagtgtttcgtttttcaaaataacaatcctctcgctctgcccgaggcg 119334  T
Q  111 aaagtgatattttctggaagggcatgtttgtttcggcatcgccgttatcaataaaaatcgtcgtttctttcacg 184  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  119333 aaagtgata-tttctgaaagggcatgtttgtttcggcatcgccgttattaataaaaatcgtcgtttctttcacg 119261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 119234 - 119162
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg 289  Q
    |||||||||||||||||| ||||||||||||||||| ||| || |||||||||||||||||||| |||||||||    
T  119234 cttggaaataatggtaatgccagaaaaaaccaaaacatcttta-tttttcttattaatttcaaagatctgcatg 119162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 370
Target Start/End: Complemental strand, 119145 - 119078
Alignment:
Q  303 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||||||||||  || |||| || |||| |||||||||||||||||| ||||||||||||| ||||    
T  119145 tttctaaaatcattcaaccattctacgcagtttgaaccataataaacccgttgaacacagtaacccta 119078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0748 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0748
Description:

Target: scaffold0748; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 216 - 377
Target Start/End: Complemental strand, 6848 - 6685
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaa-ccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn-ctctttctaaaatc 313  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||    
T  6848 cttggaaataatggtaataccagaaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgaaaaaaaaaagctctttctaaaatc 6749  T
Q  314 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatgcttct 377  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6748 atccaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatgcttct 6685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 110; Significance: 2e-55; HSPs: 3)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 45987 - 45862
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  45987 cattccttcaatcatgcatatttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 45888  T
Q  117 atattttctggaagggcatgtttgtt 142  Q
    |||||||||| |||||||||||||||    
T  45887 atattttctgtaagggcatgtttgtt 45862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 32344 - 32513
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt----tcaaaataaccatcctctcgctctgcccgaagcgaaagtgata 119  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | |||||||    |||||||||| ||||||||||||||||| |||||| |||||||    
T  32344 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgata 32443  T
Q  120 ttttctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgac 186  Q
    ||||||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| ||||||    
T  32444 ttttctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgac 32513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 216 - 369
Target Start/End: Original strand, 32541 - 32690
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaa--ccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatc 313  Q
    |||||||||||||||||| ||||||||||  | ||||| ||||||||||  ||||||||||||||||||||||||           ||||||||||||||    
T  32541 cttggaaataatggtaatgccagaaaaaaaacaaaaacatctgtatttt--cttattaatttcaaaaatctgcat----aaaaaccctctttctaaaatc 32634  T
Q  314 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 369  Q
    ||| || |||| || ||||||||||| ||||||||||| |||  ||||||||||||    
T  32635 atccaaccattttacgcagattgaactataataaacccgttgggcacagtaatcct 32690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1697 (Bit Score: 104; Significance: 9e-52; HSPs: 2)
Name: scaffold1697
Description:

Target: scaffold1697; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 216 - 369
Target Start/End: Complemental strand, 606 - 453
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||          ||||||||||||||||    
T  606 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaacctgcatgaaaaaaaaaactctttctaaaatcat 507  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 369  Q
    | ||||||||||||||| |||||||||||||||||||||||||  |||||||||    
T  506 ccaatcattatatgcaggttgaaccataataaacccattgaacgtagtaatcct 453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1697; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 24 - 132
Target Start/End: Complemental strand, 804 - 696
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtgatatttt 123  Q
    |||||||||||||||||| |||||| |||| |||||||  |||||| | |||||||||||||| ||||| |||||||||||||||||||||||| |||||    
T  804 tcaatcatgcatgtttccaagtaatatgtcatgttgctcgagtgttgtatttttcaaaataacaatcctttcgctctgcccgaagcgaaagtgaaatttt 705  T
Q  124 ctggaaggg 132  Q
    ||| |||||    
T  704 ctgtaaggg 696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 96; Significance: 6e-47; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 9834 - 9973
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| |||| ||||||||  |||||||| ||||||||||||||||| |||||| ||||    
T  9834 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 9933  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  9934 atattttctgtaagggcatgtttgtttcggcattgccgtt 9973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 10028 - 10181
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttct-aaaatca 314  Q
    |||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||          |||||||| |||||||    
T  10028 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaaatca 10125  T
Q  315 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  10126 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 10181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 93; Significance: 3e-45; HSPs: 2)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 216 - 369
Target Start/End: Complemental strand, 13104 - 12953
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  13104 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaatcat 13007  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 369  Q
    | ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  13006 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 12953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 13301 - 13163
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| |||||||||||||||||| || | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  13301 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgttttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 13203  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  13202 atattttctgtaagggcatgtttgtttcggcattgccgtt 13163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 7900 - 8038
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  7900 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 7998  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  7999 atattttctgtaagggcatgtttgtttcggcattgccgtt 8038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 8093 - 8243
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||||||    
T  8093 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaa--ctctttctaaaatcat 8188  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  8189 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 8243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 5608 - 5470
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  5608 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 5510  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  5509 atattttctgtaagggcatgtttgtttcggcattgccgtt 5470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 222 - 288
Target Start/End: Complemental strand, 5409 - 5345
Alignment:
Q  222 aataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 288  Q
    |||||||||||| ||||||| ||||||||||||||||  ||||||||||||||||||||||||||||    
T  5409 aataatggtaatgccagaaagaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcat 5345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 92; Significance: 1e-44; HSPs: 8)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 11416 - 11555
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || ||||||||  |||||||| ||||||||||||||||| |||||| ||||    
T  11416 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 11515  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  11516 atattttctgtaagggcatgtttgtttcggcattgccgtt 11555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 7560 - 7421
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || ||||||||  |||||||| || |||||||||||||| |||||| ||||    
T  7560 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgttttcaaaaataacaattctctcgctctgcccaaagcgagagtg 7461  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  7460 atattttctgtaagggcatgtttgtttcggcattgccgtt 7421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 21113 - 20974
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||| | || ||||||||  |||||||| || |||||||||||||| |||||| ||||    
T  21113 cattccttcaatcatgcatgtttttgagtaatgtgtcttgttgctttaatgctttgttttcaaaaataacaattctctcgctctgcccaaagcgagagtg 21014  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  21013 atattttctgtaagggcatgtttgtttcggcattgccgtt 20974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 21671 - 21828
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn-----ctctttctaaa 310  Q
    |||||||| ||||||||| |||||||||||||||| |||||||||||  |||||||||||||||||||||||||               |||||||||||    
T  21671 cttggaaacaatggtaatgccagaaaaaaccaaaatgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaactctttctaaa 21768  T
Q  311 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  21769 atcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 21828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 7361 - 7203
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn------ctctttctaa 309  Q
    |||||||| ||||||||| |||||||||||||||| |||||||||||  |||||||||||||||||||||||||                ||||||||||    
T  7361 cttggaaacaatggtaatgccagaaaaaaccaaaatgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaactctttctaa 7264  T
Q  310 aatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  7263 aatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 7203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 20914 - 20756
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn------ctctttctaa 309  Q
    |||||||| ||||||||| |||||||||||||||| |||||||||||  |||||||||||||||||||||||||                ||||||||||    
T  20914 cttggaaacaatggtaatgccagaaaaaaccaaaatgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaactctttctaa 20817  T
Q  310 aatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  20816 aatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 20756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 21562 - 21611
Alignment:
Q  107 agcgaaagtgatattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    ||||| |||||||||||||| |||||||||||||||||||||| ||||||    
T  21562 agcgagagtgatattttctgtaagggcatgtttgtttcggcattgccgtt 21611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 276
Target Start/End: Original strand, 11614 - 11673
Alignment:
Q  216 cttggaaataatggtaataccagaaaa-aaccaaaacgtctgtattttttcttattaatttc 276  Q
    |||||||| ||||||||| |||||||| ||||||||||||||||  ||||||||||||||||    
T  11614 cttggaaacaatggtaatgccagaaaaaaaccaaaacgtctgta--ttttcttattaatttc 11673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 24572 - 24434
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtg 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  24572 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 24474  T
Q  117 atattttctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  24473 atattttctgtaagggcatgtttgtttcggcattgccgtt 24434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 216 - 370
Target Start/End: Complemental strand, 24375 - 24215
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn--------ctctttct 307  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  ||||||||||||||| |||||||||                  ||||||||    
T  24375 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaagatctgcatgaaaaaaaaaaaaaaaaaactctttct 24278  T
Q  308 aaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  24277 aaaatcatccaatcattatatgcaggttgaaccataataaaccctttgaacacagtaatccta 24215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 88; Significance: 3e-42; HSPs: 6)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 45349 - 45183
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtgatattt- 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||||||||||||| ||||||||||||||||| |||||| ||||||||||     
T  45349 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattta 45250  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgac 186  Q
    |||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||||||||||    
T  45249 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaaatttgtcgtttctttcacgac 45183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 31649 - 31781
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagtgatatttt 123  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||||||||||||| ||||||||||||||||| |||||| |||||||||||    
T  31649 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 31748  T
Q  124 ctggaagggcatgtttgtttcggcatcgccgtt 156  Q
    ||| ||||||| |||||||||||||| ||||||    
T  31749 ctgtaagggcacgtttgtttcggcattgccgtt 31781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 38433 - 38267
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaa-gtgttttgttttt-caaaataaccatcctctcgctctgcccgaagcgaaagtgatatt 121  Q
    ||||||||||||||||| ||||||| |  |||||||||||| || | |||||||| ||||||||| ||||||  ||||||||| |||||| |||||||||    
T  38433 tcaatcatgcatgtttctgagtaatataccttgttgcttaaagtatcttgttttttcaaaataacaatcctcctgctctgcccaaagcgagagtgatatt 38334  T
Q  122 ttctggaagggcatgtttgtttcggcatcgccgtt-atcaat-aaaaatcgtcgtttctttcacgac 186  Q
    ||||| ||||||| |||||||||||||| |||||| || ||| |||||| |||||||||||||||||    
T  38333 ttctgtaagggcacgtttgtttcggcattgccgttgattaataaaaaattgtcgtttctttcacgac 38267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 365
Target Start/End: Complemental strand, 38238 - 38095
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||           ||||||||||||||||    
T  38238 cttggaaataatggtaatcccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat----aaaaaacctctttctaaaatcat 38145  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | || |||| || ||||||||||| ||||| ||||| |||  ||||||||    
T  38144 ccaaccattttacgcagattgaactataatgaacccgttgggcacagtaa 38095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 365
Target Start/End: Complemental strand, 45163 - 45020
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| | ||||||||||||||| ||||||  ||||||||||||||||||||||||||||           ||||||||||||||||    
T  45163 cttggaaataatggtaatgctagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat----aaaaaccctctttctaaaatcat 45070  T
Q  316 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 365  Q
    | || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  45069 ccaaccattttacgcagattgaactataataaacccgttgggcacagtaa 45020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 31842 - 31913
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttctta-ttaatttcaaaaatctgcat 288  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||  |||||||| ||||||||||||||||||||    
T  31842 cttggaaataatggtaatgccataaaaaaccaaaacatctgta--ttttcttatttaatttcaaaaatctgcat 31913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 216 - 370
Target Start/End: Original strand, 11647 - 11803
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnn----ctctttctaaaa 311  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||              ||||||||||||    
T  11647 cttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaaaactctttctaaaa 11744  T
Q  312 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11745 tcatccaatcattatatgcagattgaaccataataaacccgttgaacacagtaatccta 11803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 17 - 149
Target Start/End: Original strand, 11451 - 11583
Alignment:
Q  17 cattcattcaatcatgcatgtttccgagtaatgtgtcttgttgctt-aagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcgaaagt 115  Q
    ||||| |||||||||||||||||| |||||||| |||||||||||| || || |||||||| ||||||||| ||||||||||||||||| |||||| ||     
T  11451 cattccttcaatcatgcatgtttctgagtaatgcgtcttgttgctttaaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagc 11549  T
Q  116 gatattttctggaagggcatgtttgtttcggcat 149  Q
    ||||||||||| ||||||||||||||||||||||    
T  11550 gatattttctgtaagggcatgtttgtttcggcat 11583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 84; Significance: 8e-40; HSPs: 4)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 29185 - 29351
Alignment:
Q  24 tcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttt-tcaaaataaccatcctctcgctctgcccgaagcgaaagtgatattt 122  Q
    ||||||||||||||||| ||||||| |  |||||||||||||| | ||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||    
T  29185 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 29284  T
Q  123 tctggaagggcatgtttgtttcggcatcgccgtt-atcaataaaaa--tcgtcgtttctttcacgac 186  Q
    |||| |||||||||||||||||||||| |||||| || ||||||||  | |||||||||| ||||||    
T  29285 tctgtaagggcatgtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgac 29351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 216 - 351
Target Start/End: Original strand, 29377 - 29506
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnnctctttctaaaatcat 315  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||           ||||||||||||||||    
T  29377 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat----aaaaaccctctttctaaaatcat 29470  T
Q  316 ctaatcattatatgcagattgaaccataataaaccc 351  Q
    | || |||| || ||||||||||| |||||||||||    
T  29471 ccaaccattttacgcagattgaactataataaaccc 29506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 303 - 370
Target Start/End: Original strand, 7141 - 7208
Alignment:
Q  303 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  7141 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 7208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 217 - 288
Target Start/End: Original strand, 7049 - 7120
Alignment:
Q  217 ttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttc-ttattaatttcaaaaatctgcat 288  Q
    |||||||||||| |||||||||||||||||||||| ||| ||||||||| |||| ||||||||| | ||||||    
T  7049 ttggaaataatg-taataccagaaaaaaccaaaacatctttattttttctttatcaatttcaaagaactgcat 7120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 288
Target Start/End: Complemental strand, 20364 - 20293
Alignment:
Q  216 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttctta-ttaatttcaaaaatctgcat 288  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||  |||||||| ||||||||||||||||||||    
T  20364 cttggaaataatggtaatgccataaaaaaccaaaacatctgta--ttttcttatttaatttcaaaaatctgcat 20293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 370
Target Start/End: Original strand, 8209 - 8277
Alignment:
Q  302 ctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 370  Q
    ||||||||||||||| || |||| || ||||||||| ||||| ||||||| |||  |||||||| ||||    
T  8209 ctttctaaaatcatccaaccattttacgcagattgagccatagtaaacccgttgggcacagtaacccta 8277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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