View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7175_low_7 (Length: 258)
Name: NF7175_low_7
Description: NF7175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7175_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 13 - 242
Target Start/End: Original strand, 1756313 - 1756551
Alignment:
| Q |
13 |
aaaataaaatagattaaacaaatagtatcaatttgatcaaatcatataaa-gttataaacaaatagtgctaatgaatcaatccattagaacaagccggag |
111 |
Q |
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| T |
1756313 |
aaaataaaatagattaaacaaatagtatcaatttgatcaaatcatataaaagttataaacaaatagtgctaatgaatcaatccattagaacaagccggag |
1756412 |
T |
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| Q |
112 |
taaaactgaaaaaattggaattatggtatgtggtt---------atctatgaaactgcgacaaatttgctacttcgttttttcaaagaaaaaagtctaat |
202 |
Q |
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| T |
1756413 |
taaaactgaaaaaattggacttatggtatgtggtttaggttggaatctatgaaactgcgacaaatttgctacttcgttttttcaaagaaaaaagtctaat |
1756512 |
T |
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| Q |
203 |
gaatcaatcaatcaatggttacaactcacaatcacaatac |
242 |
Q |
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| T |
1756513 |
gaatcaatcaatcaatggttac-actcacaatcacaatac |
1756551 |
T |
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