View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7176_low_4 (Length: 330)

Name: NF7176_low_4
Description: NF7176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7176_low_4
NF7176_low_4
[»] chr7 (29 HSPs)
chr7 (276-330)||(20553141-20553195)
chr7 (271-330)||(36598329-36598388)
chr7 (271-319)||(36537957-36538005)
chr7 (282-330)||(9423578-9423626)
chr7 (274-330)||(33645937-33645993)
chr7 (271-330)||(28727736-28727795)
chr7 (268-330)||(3500937-3500999)
chr7 (271-329)||(7244719-7244777)
chr7 (276-329)||(46082075-46082128)
chr7 (265-321)||(5276278-5276334)
chr7 (277-329)||(21247965-21248017)
chr7 (274-321)||(6857315-6857362)
chr7 (271-330)||(33894665-33894724)
chr7 (271-330)||(39360061-39360120)
chr7 (271-330)||(48157093-48157152)
chr7 (276-330)||(4966194-4966248)
chr7 (288-330)||(20888384-20888426)
chr7 (276-330)||(28844528-28844582)
chr7 (281-330)||(18749800-18749849)
chr7 (277-330)||(39551527-39551580)
chr7 (277-330)||(45859506-45859558)
chr7 (281-321)||(1645683-1645723)
chr7 (288-328)||(11048067-11048107)
chr7 (275-327)||(19719047-19719099)
chr7 (281-321)||(29290380-29290420)
chr7 (277-329)||(39539760-39539812)
chr7 (282-330)||(39568308-39568356)
chr7 (277-321)||(44686977-44687021)
chr7 (271-303)||(47427276-47427308)
[»] chr5 (33 HSPs)
chr5 (267-330)||(35960451-35960514)
chr5 (266-321)||(34205288-34205343)
chr5 (271-330)||(37611188-37611247)
chr5 (271-330)||(37787918-37787977)
chr5 (276-329)||(11700356-11700409)
chr5 (267-329)||(8089975-8090037)
chr5 (268-321)||(2092515-2092568)
chr5 (269-322)||(12242681-12242734)
chr5 (277-330)||(16457592-16457645)
chr5 (277-322)||(18700430-18700475)
chr5 (281-329)||(7674687-7674735)
chr5 (282-330)||(10798396-10798444)
chr5 (276-320)||(15003492-15003536)
chr5 (267-330)||(32059327-32059391)
chr5 (265-321)||(41957418-41957474)
chr5 (267-330)||(12595685-12595748)
chr5 (264-319)||(16380537-16380592)
chr5 (271-321)||(27105924-27105975)
chr5 (271-330)||(32172691-32172750)
chr5 (271-330)||(37526172-37526231)
chr5 (271-330)||(37690609-37690668)
chr5 (279-330)||(37794679-37794730)
chr5 (276-330)||(6109521-6109575)
chr5 (267-329)||(10272400-10272462)
chr5 (277-318)||(11457148-11457189)
chr5 (265-330)||(18704004-18704068)
chr5 (276-321)||(29363055-29363100)
chr5 (271-312)||(38047852-38047893)
chr5 (278-330)||(2880527-2880579)
chr5 (277-329)||(8177511-8177563)
chr5 (274-330)||(17368714-17368770)
chr5 (286-330)||(17369427-17369471)
chr5 (276-312)||(40499704-40499740)
[»] chr8 (27 HSPs)
chr8 (265-330)||(8255430-8255495)
chr8 (265-330)||(30259152-30259217)
chr8 (271-330)||(30191114-30191173)
chr8 (275-329)||(11569434-11569488)
chr8 (271-319)||(30600322-30600370)
chr8 (271-330)||(30918151-30918209)
chr8 (271-329)||(5069736-5069794)
chr8 (271-321)||(8629503-8629553)
chr8 (264-322)||(26479831-26479889)
chr8 (271-312)||(30987964-30988005)
chr8 (288-328)||(2594987-2595027)
chr8 (271-330)||(29973189-29973249)
chr8 (271-311)||(40071806-40071846)
chr8 (271-330)||(6950360-6950419)
chr8 (271-318)||(7918419-7918466)
chr8 (271-322)||(11118970-11119021)
chr8 (267-330)||(13000393-13000456)
chr8 (283-330)||(25869251-25869298)
chr8 (271-329)||(32840958-32841017)
chr8 (271-321)||(779034-779084)
chr8 (264-330)||(8060707-8060773)
chr8 (271-329)||(9540969-9541027)
chr8 (276-330)||(14949904-14949958)
chr8 (271-329)||(30389138-30389196)
chr8 (277-330)||(9835879-9835932)
chr8 (264-297)||(27412848-27412881)
chr8 (271-312)||(31875568-31875609)
[»] chr1 (42 HSPs)
chr1 (267-311)||(16980860-16980904)
chr1 (272-330)||(15438001-15438059)
chr1 (271-330)||(15579520-15579579)
chr1 (267-330)||(47261547-47261610)
chr1 (271-329)||(27140517-27140575)
chr1 (276-322)||(38170668-38170714)
chr1 (271-329)||(50319078-50319136)
chr1 (273-330)||(38266435-38266492)
chr1 (271-319)||(49521778-49521827)
chr1 (271-319)||(6976973-6977021)
chr1 (278-322)||(17628645-17628689)
chr1 (270-330)||(24502800-24502860)
chr1 (278-322)||(45327626-45327670)
chr1 (285-328)||(2234778-2234821)
chr1 (287-330)||(3223705-3223748)
chr1 (271-322)||(6279445-6279496)
chr1 (262-329)||(28689416-28689483)
chr1 (279-330)||(29007697-29007748)
chr1 (271-330)||(30259459-30259518)
chr1 (290-329)||(46252674-46252713)
chr1 (271-329)||(4481969-4482027)
chr1 (268-330)||(6262776-6262838)
chr1 (267-329)||(10199377-10199439)
chr1 (288-330)||(14256776-14256818)
chr1 (271-329)||(29635386-29635444)
chr1 (276-322)||(29929599-29929645)
chr1 (269-311)||(37241622-37241664)
chr1 (271-317)||(37941958-37942004)
chr1 (271-329)||(38867804-38867862)
chr1 (276-322)||(42397771-42397817)
chr1 (276-322)||(51730531-51730577)
chr1 (281-330)||(4699598-4699647)
chr1 (275-312)||(17631079-17631116)
chr1 (276-321)||(26185558-26185603)
chr1 (277-322)||(27145967-27146012)
chr1 (281-330)||(31118081-31118130)
chr1 (267-312)||(32435360-32435405)
chr1 (267-311)||(1662630-1662674)
chr1 (286-330)||(26184786-26184830)
chr1 (277-329)||(43722137-43722189)
chr1 (267-330)||(44251574-44251640)
chr1 (285-329)||(49517100-49517144)
[»] chr6 (35 HSPs)
chr6 (266-329)||(10616509-10616572)
chr6 (271-330)||(34939551-34939610)
chr6 (271-329)||(9027617-9027675)
chr6 (273-322)||(740861-740910)
chr6 (277-330)||(7931705-7931758)
chr6 (271-330)||(2460124-2460183)
chr6 (267-330)||(4080954-4081017)
chr6 (264-329)||(2455298-2455364)
chr6 (267-321)||(27693408-27693462)
chr6 (277-330)||(4420681-4420734)
chr6 (265-330)||(20377887-20377952)
chr6 (277-322)||(30863292-30863337)
chr6 (201-246)||(31667949-31667994)
chr6 (271-330)||(281821-281880)
chr6 (287-330)||(2112238-2112281)
chr6 (267-330)||(22743519-22743582)
chr6 (271-322)||(31594357-31594408)
chr6 (279-322)||(32386087-32386130)
chr6 (271-330)||(32577959-32578018)
chr6 (266-308)||(5730737-5730779)
chr6 (292-330)||(6536985-6537023)
chr6 (276-330)||(8010395-8010449)
chr6 (279-330)||(31672113-31672166)
chr6 (275-329)||(33832250-33832304)
chr6 (264-329)||(4006753-4006818)
chr6 (267-312)||(20368149-20368194)
chr6 (276-321)||(30523706-30523751)
chr6 (271-312)||(32917253-32917294)
chr6 (268-305)||(34404603-34404640)
chr6 (266-322)||(733145-733201)
chr6 (282-330)||(6014573-6014621)
chr6 (275-319)||(30865532-30865576)
chr6 (277-329)||(31420984-31421036)
chr6 (267-319)||(33089555-33089607)
chr6 (271-319)||(33500453-33500501)
[»] chr3 (24 HSPs)
chr3 (267-330)||(1810015-1810078)
chr3 (271-330)||(37273172-37273231)
chr3 (281-329)||(41724251-41724299)
chr3 (271-327)||(42817195-42817251)
chr3 (277-330)||(43115094-43115147)
chr3 (281-330)||(50004690-50004739)
chr3 (265-321)||(1217767-1217823)
chr3 (271-327)||(11039312-11039368)
chr3 (267-326)||(30750042-30750099)
chr3 (274-330)||(36200134-36200190)
chr3 (282-330)||(42745076-42745124)
chr3 (264-319)||(2304237-2304292)
chr3 (271-330)||(21574528-21574587)
chr3 (267-330)||(29771876-29771939)
chr3 (267-330)||(36646351-36646414)
chr3 (271-321)||(24281094-24281144)
chr3 (276-322)||(44747152-44747198)
chr3 (277-330)||(26330302-26330355)
chr3 (264-297)||(49845506-49845539)
chr3 (273-321)||(20192581-20192629)
chr3 (264-300)||(24158482-24158518)
chr3 (279-330)||(37825160-37825212)
chr3 (271-319)||(40880921-40880969)
chr3 (271-319)||(47249459-47249507)
[»] chr2 (29 HSPs)
chr2 (267-314)||(12785917-12785964)
chr2 (277-330)||(41809224-41809277)
chr2 (277-320)||(9878661-9878704)
chr2 (278-329)||(30538153-30538204)
chr2 (270-329)||(45314907-45314966)
chr2 (271-329)||(15120222-15120280)
chr2 (276-330)||(43065428-43065482)
chr2 (267-312)||(1742001-1742046)
chr2 (277-330)||(3235363-3235416)
chr2 (271-312)||(4550803-4550844)
chr2 (275-328)||(32614925-32614978)
chr2 (267-320)||(37766847-37766900)
chr2 (278-318)||(29936043-29936083)
chr2 (267-330)||(14316114-14316177)
chr2 (283-321)||(14666595-14666633)
chr2 (271-321)||(19977994-19978044)
chr2 (280-330)||(31739954-31740004)
chr2 (272-322)||(33385635-33385684)
chr2 (271-322)||(33942196-33942249)
chr2 (264-321)||(11344736-11344793)
chr2 (277-330)||(32821847-32821900)
chr2 (273-330)||(33525942-33525999)
chr2 (276-329)||(35378994-35379047)
chr2 (281-322)||(44606093-44606134)
chr2 (282-330)||(1160655-1160703)
chr2 (277-329)||(11063527-11063579)
chr2 (274-330)||(34652012-34652068)
chr2 (267-307)||(43808619-43808659)
chr2 (292-328)||(43910993-43911029)
[»] chr4 (17 HSPs)
chr4 (265-321)||(37863921-37863977)
chr4 (271-330)||(27123325-27123384)
chr4 (276-330)||(1137750-1137804)
chr4 (267-329)||(4691887-4691949)
chr4 (264-305)||(7749057-7749098)
chr4 (269-330)||(19395042-19395103)
chr4 (282-327)||(53034783-53034828)
chr4 (269-329)||(33534140-33534200)
chr4 (271-321)||(2996620-2996670)
chr4 (268-330)||(21952986-21953048)
chr4 (278-319)||(1965990-1966031)
chr4 (288-329)||(8468987-8469028)
chr4 (264-297)||(52428736-52428769)
chr4 (270-330)||(10812546-10812606)
chr4 (282-330)||(24929531-24929579)
chr4 (268-312)||(25952873-25952917)
chr4 (271-311)||(27725271-27725311)
[»] scaffold0147 (1 HSPs)
scaffold0147 (276-322)||(12682-12728)
[»] scaffold0311 (1 HSPs)
scaffold0311 (279-330)||(10598-10649)
[»] scaffold0608 (1 HSPs)
scaffold0608 (271-329)||(9610-9668)


Alignment Details
Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 276 - 330
Target Start/End: Complemental strand, 20553195 - 20553141
Alignment:
Q  276 gagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20553195 gagagcttatggaaacagcttacgacatgttcataagttgttttcagattatttc 20553141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 36598329 - 36598388
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||||||||||||||||| |||| |||||||||||||| ||||||||| |||||||    
T  36598329 tttgagagagcttatggaaacatcttatgacatgttcataagctgttttcagcttatttc 36598388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 271 - 319
Target Start/End: Complemental strand, 36538005 - 36537957
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgtttt 319  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  36538005 tttgagagaacttatggaaacaacttatgacatgttcataagttgtttt 36537957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 282 - 330
Target Start/End: Original strand, 9423578 - 9423626
Alignment:
Q  282 ttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  9423578 ttatggaaacaatttatgacatgttcataagttgttttcagcttatttc 9423626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 274 - 330
Target Start/End: Original strand, 33645937 - 33645993
Alignment:
Q  274 gagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||||||||||||||||||| |||||||  |||||||||||| || |||||||    
T  33645937 gagagagcttatggaaacaacttatgacatgtctataagttgtttttaggttatttc 33645993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 28727736 - 28727795
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||||||||||||||||  |||| ||||||||| || ||||||||||| |||||||    
T  28727736 tttgagagagcttatggaaacggcttatgacatgttcgtatgttgttttcagcttatttc 28727795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 330
Target Start/End: Original strand, 3500937 - 3500999
Alignment:
Q  268 ctatttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||||| ||||||||||||||| |||||| ||||||| ||| || ||||||||| |||||||    
T  3500937 ctatttgtgagagcttatggaaataacttatgacatgtacatcagctgttttcagcttatttc 3500999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 329
Target Start/End: Complemental strand, 7244777 - 7244719
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    ||||| |||||| |||||||||| ||| |||||| ||||||||||||||||| ||||||    
T  7244777 tttgaaagagctgatggaaacaatttatgacatgctcataagttgttttcagcttattt 7244719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 329
Target Start/End: Complemental strand, 46082128 - 46082075
Alignment:
Q  276 gagagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    ||||||||||| |||||||||| ||||||  |||||||||||||||| ||||||    
T  46082128 gagagcttatgaaaacaacttatgacatgaccataagttgttttcagcttattt 46082075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 5276334 - 5276278
Alignment:
Q  265 aaactatttgagagagcttatggaaacaacttacgacatgttcataagttgttttca 321  Q
    ||||| |||||||||||||||| ||||| |||| ||||| ||||| |||||||||||    
T  5276334 aaactgtttgagagagcttatgcaaacatcttatgacatcttcattagttgttttca 5276278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 329
Target Start/End: Complemental strand, 21248017 - 21247965
Alignment:
Q  277 agagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    |||| ||||||||| |||||| ||||||||||||||||||||| || ||||||    
T  21248017 agagtttatggaaataacttatgacatgttcataagttgttttaagcttattt 21247965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 321
Target Start/End: Original strand, 6857315 - 6857362
Alignment:
Q  274 gagagagcttatggaaacaacttacgacatgttcataagttgttttca 321  Q
    ||||||||||||||||||| |||| | ||||| |||||||||||||||    
T  6857315 gagagagcttatggaaacagcttatgccatgtccataagttgttttca 6857362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 33894724 - 33894665
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||| ||||||||||| ||||| | || ||||||| |||||||||||||||| |||||||    
T  33894724 tttgtgagagcttatgaaaacagcatatgacatgtccataagttgttttcagcttatttc 33894665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 39360120 - 39360061
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||| |||| |||||||||||||||| ||||| | ||||||||| |||||| |||||||    
T  39360120 tttgatagagtttatggaaacaacttatgacatatccataagttgctttcagcttatttc 39360061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 48157093 - 48157152
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||| |||||||||| ||||||||||| | ||||| |||||| ||||||||| |||||||    
T  48157093 tttgggagagcttatagaaacaacttatgccatgtccataagctgttttcagcttatttc 48157152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 330
Target Start/End: Complemental strand, 4966248 - 4966194
Alignment:
Q  276 gagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||||| ||||| ||||| || |||| |||||||||||||||| |||||||    
T  4966248 gagagcttatagaaaccacttatgatatgtccataagttgttttcagtttatttc 4966194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 20888384 - 20888426
Alignment:
Q  288 aaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||||| | |||||||||||||||||||||| |||||||    
T  20888384 aaacaacttatgccatgttcataagttgttttcagcttatttc 20888426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 330
Target Start/End: Complemental strand, 28844582 - 28844528
Alignment:
Q  276 gagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||| || |||||||||| ||||||| ||| |||||||||||| |||||||    
T  28844582 gagagcttctgaaaacaacttatgacatgtccatcagttgttttcagtttatttc 28844528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 18749800 - 18749849
Alignment:
Q  281 cttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||| |||||| |||||||||||||||||||  |||||||| |||||||    
T  18749800 cttatagaaacagcttacgacatgttcataagcagttttcagcttatttc 18749849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 330
Target Start/End: Original strand, 39551527 - 39551580
Alignment:
Q  277 agagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||| |||||||||||||||| ||||||| |||||| |||| |||| |||||||    
T  39551527 agaggttatggaaacaacttatgacatgtccataaggtgttgtcagcttatttc 39551580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 330
Target Start/End: Original strand, 45859506 - 45859558
Alignment:
Q  277 agagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||| ||||||||| || ||||||||||| |||||||||||| |||||||    
T  45859506 agagcttacggaaacaacatatgacatgttcat-agttgttttcagcttatttc 45859558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 321
Target Start/End: Original strand, 1645683 - 1645723
Alignment:
Q  281 cttatggaaacaacttacgacatgttcataagttgttttca 321  Q
    |||||| |||||||||| |||||||| ||||||||||||||    
T  1645683 cttatgtaaacaacttatgacatgtttataagttgttttca 1645723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 11048107 - 11048067
Alignment:
Q  288 aaacaacttacgacatgttcataagttgttttcagattatt 328  Q
    |||||||||| |||||||||||||| ||||||||| |||||    
T  11048107 aaacaacttatgacatgttcataagctgttttcagcttatt 11048067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 19719099 - 19719047
Alignment:
Q  275 agagagcttatggaaacaacttacgacatgttcataagttgttttcagattat 327  Q
    ||||| |||||| |||||||||| |||||||||||||  ||||||||| ||||    
T  19719099 agagaacttatgaaaacaacttatgacatgttcataaactgttttcagcttat 19719047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 321
Target Start/End: Complemental strand, 29290420 - 29290380
Alignment:
Q  281 cttatggaaacaacttacgacatgttcataagttgttttca 321  Q
    ||||||||||||||||| ||||||| |||||| ||||||||    
T  29290420 cttatggaaacaacttatgacatgtccataagctgttttca 29290380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 329
Target Start/End: Original strand, 39539760 - 39539812
Alignment:
Q  277 agagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    |||| ||| |||||||||||| ||||||| |||||| ||||||||| ||||||    
T  39539760 agagtttacggaaacaacttatgacatgtccataagctgttttcagcttattt 39539812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 330
Target Start/End: Original strand, 39568308 - 39568356
Alignment:
Q  282 ttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||||||| |||||| ||||||| |||||||||||||| | |||||||    
T  39568308 ttatggaaataacttatgacatgtccataagttgttttcggcttatttc 39568356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 321
Target Start/End: Complemental strand, 44687021 - 44686977
Alignment:
Q  277 agagcttatggaaacaacttacgacatgttcataagttgttttca 321  Q
    ||||||||||||||||||||| ||||||| ||| || ||||||||    
T  44687021 agagcttatggaaacaacttatgacatgtccatgagctgttttca 44686977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 303
Target Start/End: Original strand, 47427276 - 47427308
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacat 303  Q
    ||||||||||||||||||||||||||| |||||    
T  47427276 tttgagagagcttatggaaacaacttatgacat 47427308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 5e-16; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 267 - 330
Target Start/End: Complemental strand, 35960514 - 35960451
Alignment:
Q  267 actatttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||| |||||| || |||||||    
T  35960514 actatttgagagagcttatggaagcaacttacgacatgtccataagatgtttttagcttatttc 35960451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 266 - 321
Target Start/End: Complemental strand, 34205343 - 34205288
Alignment:
Q  266 aactatttgagagagcttatggaaacaacttacgacatgttcataagttgttttca 321  Q
    ||||||||  |||||||||||||||||||||| | |||||||||||||||||||||    
T  34205343 aactattttggagagcttatggaaacaacttatgtcatgttcataagttgttttca 34205288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 37611188 - 37611247
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||||||||||| |||||||||  |||||||||||||| ||||||||| |||||||    
T  37611188 tttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttc 37611247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 37787918 - 37787977
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||||||||||| |||||||||  |||||||||||||| ||||||||| |||||||    
T  37787918 tttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttc 37787977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 329
Target Start/End: Original strand, 11700356 - 11700409
Alignment:
Q  276 gagagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    ||||| |||||||||||||||| ||||||| |||||| ||||||||||||||||    
T  11700356 gagagtttatggaaacaacttatgacatgtccataagctgttttcagattattt 11700409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 329
Target Start/End: Complemental strand, 8090037 - 8089975
Alignment:
Q  267 actatttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    |||||||||||||||||||| |||||||||| || || ||| |||| ||||||||| ||||||    
T  8090037 actatttgagagagcttatgaaaacaacttatgatatattcctaagctgttttcagcttattt 8089975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 321
Target Start/End: Original strand, 2092515 - 2092568
Alignment:
Q  268 ctatttgagagagcttatggaaacaacttacgacatgttcataagttgttttca 321  Q
    ||||||| |||||||||| ||||||||||| | ||||| |||||||||||||||    
T  2092515 ctatttgggagagcttattgaaacaacttatggcatgtccataagttgttttca 2092568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 322
Target Start/End: Original strand, 12242681 - 12242734
Alignment:
Q  269 tatttgagagagcttatggaaacaacttacgacatgttcataagttgttttcag 322  Q
    |||||||||||||||||||||| |||||| ||||||  ||| ||||||||||||    
T  12242681 tatttgagagagcttatggaaaaaacttatgacatgaacattagttgttttcag 12242734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 330
Target Start/End: Original strand, 16457592 - 16457645
Alignment:
Q  277 agagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||| ||||||||||| ||  |||||||||||||||||||||||| |||||||    
T  16457592 agagcatatggaaacaaattgtgacatgttcataagttgttttcagcttatttc 16457645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 322
Target Start/End: Complemental strand, 18700475 - 18700430
Alignment:
Q  277 agagcttatggaaacaacttacgacatgttcataagttgttttcag 322  Q
    ||||||||||||||||||||| |||||||  |||||||||||||||    
T  18700475 agagcttatggaaacaacttatgacatgtctataagttgttttcag 18700430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 7674735 - 7674687
Alignment:
Q  281 cttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    ||||||||||||||||| |||||||| ||||| ||||||||| ||||||    
T  7674735 cttatggaaacaacttatgacatgtttataaggtgttttcagcttattt 7674687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 330
Target Start/End: Original strand, 10798396 - 10798444
Alignment:
Q  282 ttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||||||||| ||||||||| ||||||| | |||||||||||||||||    
T  10798396 ttatggaaacagcttacgacaagttcataggctgttttcagattatttc 10798444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 320
Target Start/End: Original strand, 15003492 - 15003536
Alignment:
Q  276 gagagcttatggaaacaacttacgacatgttcataagttgttttc 320  Q
    |||| |||| |||||||||||||||||||||| ||||||||||||    
T  15003492 gagaacttaaggaaacaacttacgacatgttcgtaagttgttttc 15003536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 330
Target Start/End: Original strand, 32059327 - 32059391
Alignment:
Q  267 actatttgagagagcttatggaaacaactta-cgacatgttcataagttgttttcagattatttc 330  Q
    |||||||||||||| |||| |||||| |||| || ||||||||| |||||||||||| |||||||    
T  32059327 actatttgagagagtttatcgaaacagcttaacggcatgttcatgagttgttttcagcttatttc 32059391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 321
Target Start/End: Original strand, 41957418 - 41957474
Alignment:
Q  265 aaactatttgagagagcttatggaaacaacttacgacatgttcataagttgttttca 321  Q
    ||||||||||  |||||||| ||||||| |||| ||||||| |||||||||||||||    
T  41957418 aaactatttggaagagcttacggaaacagcttatgacatgtccataagttgttttca 41957474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 330
Target Start/End: Original strand, 12595685 - 12595748
Alignment:
Q  267 actatttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||||||||||||| ||||||| ||||   ||||||||||||  |||||||| |||||||    
T  12595685 actatttgagagagcttaaggaaacagcttattgcatgttcataagccgttttcagcttatttc 12595748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 319
Target Start/End: Original strand, 16380537 - 16380592
Alignment:
Q  264 gaaactatttgagagagcttatggaaacaacttacgacatgttcataagttgtttt 319  Q
    |||||||||||  |||| ||||||||||| |||||||||||| |||||| ||||||    
T  16380537 gaaactatttgcaagagtttatggaaacagcttacgacatgtccataagctgtttt 16380592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 321
Target Start/End: Original strand, 27105924 - 27105975
Alignment:
Q  271 tttgagagagcttatggaaacaa-cttacgacatgttcataagttgttttca 321  Q
    |||||||||||||||||||| || |||| || ||||||||||||||||||||    
T  27105924 tttgagagagcttatggaaaaaagcttatgatatgttcataagttgttttca 27105975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 32172750 - 32172691
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||| |||||||||||||||||||||| ||||||| ||||||   ||||||| |||||||    
T  32172750 tttgggagagcttatggaaacaacttatgacatgtccataagccattttcagcttatttc 32172691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 37526172 - 37526231
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||||||||||| | ||||| || |||||||| ||||| ||||||||| |||||||    
T  37526172 tttgagagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttc 37526231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 37690609 - 37690668
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||||||||||| | ||||| || |||||||| ||||| ||||||||| |||||||    
T  37690609 tttgagagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttc 37690668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 279 - 330
Target Start/End: Original strand, 37794679 - 37794730
Alignment:
Q  279 agcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||| |||||||||| |||||||||||||| |||||| || |||||||    
T  37794679 agcttatgaaaacaacttatgacatgttcataagctgttttgagcttatttc 37794730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 330
Target Start/End: Complemental strand, 6109575 - 6109521
Alignment:
Q  276 gagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||||||||||||| || ||| || |||| |||||||||||||||| |||||||    
T  6109575 gagagcttatggaaaaaaattatgatatgtccataagttgttttcagcttatttc 6109521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 329
Target Start/End: Original strand, 10272400 - 10272462
Alignment:
Q  267 actatttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    |||||||| ||| |||||| ||||||||||| |||||||   |||||||||||||| ||||||    
T  10272400 actatttgggagtgcttatagaaacaacttatgacatgtctgtaagttgttttcagcttattt 10272462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 318
Target Start/End: Complemental strand, 11457189 - 11457148
Alignment:
Q  277 agagcttatggaaacaacttacgacatgttcataagttgttt 318  Q
    ||||||||||||||||||||| ||||||| |||||| |||||    
T  11457189 agagcttatggaaacaacttatgacatgtccataagctgttt 11457148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 18704004 - 18704068
Alignment:
Q  265 aaactatttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||| ||| |||||||||||| ||||||||||  ||||||  ||||||||||||||| |||||||    
T  18704004 aaactgtttaagagagcttatg-aaacaacttataacatgtctataagttgttttcagcttatttc 18704068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 321
Target Start/End: Complemental strand, 29363100 - 29363055
Alignment:
Q  276 gagagcttatggaaacaacttacgacatgttcataagttgttttca 321  Q
    ||||||||||| |||||||||| ||||||  |||||||||||||||    
T  29363100 gagagcttatgaaaacaacttatgacatgcccataagttgttttca 29363055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 38047852 - 38047893
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataag 312  Q
    |||| |||||||||||||||||||||| ||||||| ||||||    
T  38047852 tttgggagagcttatggaaacaacttatgacatgtccataag 38047893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 330
Target Start/End: Original strand, 2880527 - 2880579
Alignment:
Q  278 gagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||||||||||||| || | || ||||||||||| ||||||||| |||||||    
T  2880527 gagcttatggaaacagctaatgatatgttcataaggtgttttcagcttatttc 2880579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 329
Target Start/End: Original strand, 8177511 - 8177563
Alignment:
Q  277 agagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    |||||| ||||||||| |||| || |||| |||||||||||||||| ||||||    
T  8177511 agagctcatggaaacagcttatgatatgtccataagttgttttcaggttattt 8177563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 330
Target Start/End: Complemental strand, 17368770 - 17368714
Alignment:
Q  274 gagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||| |||||| |||||||||| |||||||||||| |  |||||||| |||||||    
T  17368770 gagagaacttatgaaaacaacttatgacatgttcatatgcagttttcagcttatttc 17368714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 330
Target Start/End: Original strand, 17369427 - 17369471
Alignment:
Q  286 ggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||||| |||| |||||||  |||||||||||||||||||||||    
T  17369427 ggaaacagcttatgacatgtctataagttgttttcagattatttc 17369471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 312
Target Start/End: Original strand, 40499704 - 40499740
Alignment:
Q  276 gagagcttatggaaacaacttacgacatgttcataag 312  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  40499704 gagagcttatggaaacaacttatgacatgtccataag 40499740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 8255495 - 8255430
Alignment:
Q  265 aaactatttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||||||||||||| ||||||||||||||| | ||||||| |||||||||||||||  |||||||    
T  8255495 aaactatttgagagaacttatggaaacaactaatgacatgtgcataagttgttttcaccttatttc 8255430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 30259217 - 30259152
Alignment:
Q  265 aaactatttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||||||||||||||||||||||| |||| || ||||  ||||||||||||||| |||||||    
T  30259217 aaactatttgagagagcttatggaaacagcttatgatatgtctataagttgttttcagtttatttc 30259152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 30191114 - 30191173
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||    
T  30191114 tttgggagagcttatggaaacaacttatgacatgttcaaaacttgttttcagcttatttc 30191173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 329
Target Start/End: Original strand, 11569434 - 11569488
Alignment:
Q  275 agagagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    |||||||||||||||||| |||| ||||||| |||||||||||||||| ||||||    
T  11569434 agagagcttatggaaacagcttatgacatgtacataagttgttttcagcttattt 11569488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 271 - 319
Target Start/End: Original strand, 30600322 - 30600370
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgtttt 319  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||||||    
T  30600322 tttgagagagcttatggaaacaactcatgacatgttcatgagttgtttt 30600370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 30918209 - 30918151
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||||||||||| |||||||||  ||||| |||||||||||||||||| |||||||    
T  30918209 tttgagagagcttatgaaaacaacttgtgacat-ttcataagttgttttcagcttatttc 30918151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 329
Target Start/End: Complemental strand, 5069794 - 5069736
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    |||||||||||||||||||||| ||||  ||||||||||||||  ||||||| ||||||    
T  5069794 tttgagagagcttatggaaacatcttataacatgttcataagtcattttcagcttattt 5069736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 321
Target Start/End: Complemental strand, 8629553 - 8629503
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttca 321  Q
    ||||||||| |||||| |||||||||| |||||| ||||||||||||||||    
T  8629553 tttgagagaacttatgaaaacaacttatgacatgatcataagttgttttca 8629503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 26479889 - 26479831
Alignment:
Q  264 gaaactatttgagagagcttatggaaacaacttacgacatgttcataagttgttttcag 322  Q
    ||||||||||| |||||||||||||||||||||| | |||||  ||||||| |||||||    
T  26479889 gaaactatttgcgagagcttatggaaacaacttatgtcatgtctataagtttttttcag 26479831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 30987964 - 30988005
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataag 312  Q
    ||||||||||||||||||||||||||| ||||||| ||||||    
T  30987964 tttgagagagcttatggaaacaacttatgacatgtccataag 30988005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 2594987 - 2595027
Alignment:
Q  288 aaacaacttacgacatgttcataagttgttttcagattatt 328  Q
    |||||||||| |||||||||||||||||||||||| |||||    
T  2594987 aaacaacttatgacatgttcataagttgttttcagcttatt 2595027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 29973249 - 29973189
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataag-ttgttttcagattatttc 330  Q
    |||||||||||||||||||||||||||| |||||| || ||| | |||||||| |||||||    
T  29973249 tttgagagagcttatggaaacaacttacaacatgtccaaaagctggttttcagtttatttc 29973189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 40071846 - 40071806
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataa 311  Q
    |||| |||||||||||||||||||||| |||||||||||||    
T  40071846 tttgggagagcttatggaaacaacttatgacatgttcataa 40071806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 6950419 - 6950360
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||| ||||||||||| ||||||| || |||||||  ||||||||||||||| |||||||    
T  6950419 tttgggagagcttatgtaaacaacctatgacatgtcgataagttgttttcagcttatttc 6950360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 318
Target Start/End: Original strand, 7918419 - 7918466
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttt 318  Q
    |||| ||||||||||| |||||||||| |||||||||||||| |||||    
T  7918419 tttgggagagcttatgaaaacaacttaagacatgttcataagctgttt 7918466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 11118970 - 11119021
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcag 322  Q
    |||| ||||||||||||| || ||||| |||||||||||||| |||||||||    
T  11118970 tttgggagagcttatggagactacttatgacatgttcataagctgttttcag 11119021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 330
Target Start/End: Original strand, 13000393 - 13000456
Alignment:
Q  267 actatttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||||||  |||| |||||| ||||||||| ||||||| || ||||||||||||| |||||||    
T  13000393 actatttgcaagagtttatggtaacaacttatgacatgtccacaagttgttttcagcttatttc 13000456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 283 - 330
Target Start/End: Original strand, 25869251 - 25869298
Alignment:
Q  283 tatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||| |||||| ||||||| |||||||||||||||| |||||||    
T  25869251 tatggaaataacttatgacatgtccataagttgttttcagcttatttc 25869298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 329
Target Start/End: Original strand, 32840958 - 32841017
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacat-gttcataagttgttttcagattattt 329  Q
    |||| |||| |||||| |||||||||| ||||| ||||||||||||||||||| ||||||    
T  32840958 tttgggagaacttatgaaaacaacttatgacattgttcataagttgttttcagcttattt 32841017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 321
Target Start/End: Original strand, 779034 - 779084
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttca 321  Q
    ||||| ||| |||| | |||||||||| |||||||||||||||||||||||    
T  779034 tttgaaagaacttacgaaaacaacttatgacatgttcataagttgttttca 779084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 8060773 - 8060707
Alignment:
Q  264 gaaactatttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||| |||||||||||||||| |||||| ||| |  | ||||||||||| ||||||| |||||||    
T  8060773 gaaactgtttgagagagcttatgaaaacaaattatggaaagttcataagttattttcagcttatttc 8060707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 329
Target Start/End: Original strand, 9540969 - 9541027
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    |||| ||||||||||||||||| |||| ||||||| ||||| |||| ||||| ||||||    
T  9540969 tttgggagagcttatggaaacatcttatgacatgtccataatttgtgttcagcttattt 9541027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 330
Target Start/End: Complemental strand, 14949958 - 14949904
Alignment:
Q  276 gagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||||||||| ||| |||||| ||||||| |||||| ||||||||| |||||||    
T  14949958 gagagcttatgaaaataacttatgacatgtccataagctgttttcagcttatttc 14949904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 329
Target Start/End: Complemental strand, 30389196 - 30389138
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    ||||||||||| |||| ||| | || | |||||||||||||||||||||||| ||||||    
T  30389196 tttgagagagcatatgaaaatagctaatgacatgttcataagttgttttcagcttattt 30389138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 330
Target Start/End: Original strand, 9835879 - 9835932
Alignment:
Q  277 agagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||||| ||||| |||| |||||||||||||| ||||||||  |||||||    
T  9835879 agagcttatgtaaacagcttatgacatgttcataagctgttttcatcttatttc 9835932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 297
Target Start/End: Original strand, 27412848 - 27412881
Alignment:
Q  264 gaaactatttgagagagcttatggaaacaactta 297  Q
    ||||||||||||||||||||||| ||||||||||    
T  27412848 gaaactatttgagagagcttatgaaaacaactta 27412881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 31875568 - 31875609
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataag 312  Q
    ||||||| ||||||||||||||||||| ||||||| ||||||    
T  31875568 tttgagaaagcttatggaaacaacttatgacatgtccataag 31875609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 311
Target Start/End: Complemental strand, 16980904 - 16980860
Alignment:
Q  267 actatttgagagagcttatggaaacaacttacgacatgttcataa 311  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  16980904 actatttgagagagcttatggaaacaacttacgacattttcataa 16980860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 272 - 330
Target Start/End: Complemental strand, 15438059 - 15438001
Alignment:
Q  272 ttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||||||| |||||||||||||||| ||||||||||||||||  |||||| |||||||    
T  15438059 ttgagagaggttatggaaacaacttatgacatgttcataagttactttcagcttatttc 15438001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 15579579 - 15579520
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||| |||||||| ||||||||||||| ||||||| ||||||||||| |||| |||||||    
T  15579579 tttgggagagcttgtggaaacaacttatgacatgtccataagttgttctcagcttatttc 15579520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 330
Target Start/End: Complemental strand, 47261610 - 47261547
Alignment:
Q  267 actatttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||| |||||||||| ||| ||||||| ||||||||||| ||| |||||||| |||||||    
T  47261610 actatttgggagagcttatagaagcaacttatgacatgttcattagtggttttcagcttatttc 47261547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 329
Target Start/End: Complemental strand, 27140575 - 27140517
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    |||||||||| ||| ||||||| |||| ||||||| |||||||||||||||| ||||||    
T  27140575 tttgagagagtttaaggaaacagcttatgacatgtccataagttgttttcagcttattt 27140517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 322
Target Start/End: Original strand, 38170668 - 38170714
Alignment:
Q  276 gagagcttatggaaacaacttacgacatgttcataagttgttttcag 322  Q
    ||||||||||| ||||| |||| ||||||||||||||||||||||||    
T  38170668 gagagcttatgaaaacagcttatgacatgttcataagttgttttcag 38170714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 329
Target Start/End: Original strand, 50319078 - 50319136
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    |||| ||||||||||||||||| | || |||||||  ||||||||||||||||||||||    
T  50319078 tttgggagagcttatggaaacatcatatgacatgtatataagttgttttcagattattt 50319136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 330
Target Start/End: Original strand, 38266435 - 38266492
Alignment:
Q  273 tgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||| ||||| ||| |||||||||||||||||||| |||||||||  |||||||    
T  38266435 tgagagagtttatgaaaataacttacgacatgttcataatttgttttcaacttatttc 38266492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 319
Target Start/End: Original strand, 49521778 - 49521827
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcat-aagttgtttt 319  Q
    ||||||||||||| ||||||||||||| ||||||||||| ||||||||||    
T  49521778 tttgagagagcttgtggaaacaacttatgacatgttcataaagttgtttt 49521827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 319
Target Start/End: Complemental strand, 6977021 - 6976973
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgtttt 319  Q
    |||| ||||||| |||||||||||||| |||||||||||||| ||||||    
T  6977021 tttgcgagagctaatggaaacaacttatgacatgttcataagctgtttt 6976973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 322
Target Start/End: Complemental strand, 17628689 - 17628645
Alignment:
Q  278 gagcttatggaaacaacttacgacatgttcataagttgttttcag 322  Q
    |||||||||||||||||||| ||||||| |||||| |||||||||    
T  17628689 gagcttatggaaacaacttatgacatgtccataagctgttttcag 17628645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 24502800 - 24502860
Alignment:
Q  270 atttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||||||||||  ||||||||||| |||||||  |||| |||||||||| |||||||    
T  24502800 atttgagagagcttacagaaacaacttatgacatgtcaataatttgttttcagcttatttc 24502860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 322
Target Start/End: Complemental strand, 45327670 - 45327626
Alignment:
Q  278 gagcttatggaaacaacttacgacatgttcataagttgttttcag 322  Q
    |||||||||||||||||||| ||||||| ||||| ||||||||||    
T  45327670 gagcttatggaaacaacttatgacatgtccataaattgttttcag 45327626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 285 - 328
Target Start/End: Complemental strand, 2234821 - 2234778
Alignment:
Q  285 tggaaacaacttacgacatgttcataagttgttttcagattatt 328  Q
    ||||||||||||| ||||||||||||||||||||| ||| ||||    
T  2234821 tggaaacaacttatgacatgttcataagttgtttttagactatt 2234778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 3223748 - 3223705
Alignment:
Q  287 gaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||    
T  3223748 gaaacaacttatgacatgtttataagttgttttcagcttatttc 3223705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 6279496 - 6279445
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcag 322  Q
    ||||||||||||||||||||||  | || |||||| ||||||||||||||||    
T  6279496 tttgagagagcttatggaaacagttaaccacatgtccataagttgttttcag 6279445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 28689416 - 28689483
Alignment:
Q  262 cagaaactatttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    |||| ||| ||| ||||| |||| ||||||| |||| ||||||| |||||||||||||||| ||||||    
T  28689416 cagatactgttttagagaacttacggaaacagcttatgacatgtccataagttgttttcagcttattt 28689483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 279 - 330
Target Start/End: Original strand, 29007697 - 29007748
Alignment:
Q  279 agcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||| ||||||||| ||| || ||||||||||||||||||||| |||||||    
T  29007697 agcttttggaaacaatttatgatatgttcataagttgttttcagcttatttc 29007748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 30259459 - 30259518
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||| ||||||||| |||||||||||||||||||  |||| |||||||||  |||||||    
T  30259459 tttgaaagagcttatagaaacaacttacgacatgtcaataaattgttttcaacttatttc 30259518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 290 - 329
Target Start/End: Original strand, 46252674 - 46252713
Alignment:
Q  290 acaacttacgacatgttcataagttgttttcagattattt 329  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  46252674 acaacttatgacatgttcataagttgttttcaggttattt 46252713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 329
Target Start/End: Complemental strand, 4482027 - 4481969
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    ||||||||| |||||| ||||||||||  ||||||||||||| |||||| || ||||||    
T  4482027 tttgagagaacttatgaaaacaacttattacatgttcataagctgtttttagcttattt 4481969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 6262838 - 6262776
Alignment:
Q  268 ctatttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||||| ||||||||||| ||| |||||| || |||| ||||||||||||| || |||||||    
T  6262838 ctatttgggagagcttatgaaaataacttatgatatgtccataagttgttttaagcttatttc 6262776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 329
Target Start/End: Original strand, 10199377 - 10199439
Alignment:
Q  267 actatttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    |||||||| |||| || ||| ||| | |||| |||||||||||||||||||||||| ||||||    
T  10199377 actatttgggagaactcatgaaaatagcttatgacatgttcataagttgttttcagcttattt 10199439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 14256776 - 14256818
Alignment:
Q  288 aaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||||| |||||| ||||||||||||||||| |||||||    
T  14256776 aaacaacttaggacatggtcataagttgttttcagcttatttc 14256818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 329
Target Start/End: Complemental strand, 29635444 - 29635386
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    |||||||||  ||||| |||||| ||| |||||||| ||||||||||||||| ||||||    
T  29635444 tttgagagaatttatgaaaacaagttatgacatgtttataagttgttttcagcttattt 29635386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 322
Target Start/End: Original strand, 29929599 - 29929645
Alignment:
Q  276 gagagcttatggaaacaacttacgacatgttcataagttgttttcag 322  Q
    ||||||||||| |||||||| | ||||||| ||||||||||||||||    
T  29929599 gagagcttatgaaaacaactcatgacatgtgcataagttgttttcag 29929645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 311
Target Start/End: Original strand, 37241622 - 37241664
Alignment:
Q  269 tatttgagagagcttatggaaacaacttacgacatgttcataa 311  Q
    |||||| ||||||||||||||||||||||  ||||||||||||    
T  37241622 tatttgggagagcttatggaaacaacttataacatgttcataa 37241664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 317
Target Start/End: Original strand, 37941958 - 37942004
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgtt 317  Q
    ||||||||||||||| ||||||| ||| ||||||| |||||||||||    
T  37941958 tttgagagagcttatagaaacaatttatgacatgtccataagttgtt 37942004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 329
Target Start/End: Original strand, 38867804 - 38867862
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    |||||||||||||||||||| |||||| || |||| ||| ||||||||| || ||||||    
T  38867804 tttgagagagcttatggaaataacttatgatatgtccatcagttgtttttagcttattt 38867862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 322
Target Start/End: Complemental strand, 42397817 - 42397771
Alignment:
Q  276 gagagcttatggaaacaacttacgacatgttcataagttgttttcag 322  Q
    |||||||| | ||||||||||| | ||||||||||||||||||||||    
T  42397817 gagagcttttagaaacaacttatggcatgttcataagttgttttcag 42397771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 322
Target Start/End: Complemental strand, 51730577 - 51730531
Alignment:
Q  276 gagagcttatggaaacaacttacgacatgttcataagttgttttcag 322  Q
    ||||||||||||||||| |||| ||||| ||||||||| ||||||||    
T  51730577 gagagcttatggaaacaccttatgacattttcataagtagttttcag 51730531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 4699598 - 4699647
Alignment:
Q  281 cttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||| |||||||||| |||||||||||||| |||||| || |||||||    
T  4699598 cttatgaaaacaacttatgacatgttcataagctgtttttagcttatttc 4699647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 312
Target Start/End: Original strand, 17631079 - 17631116
Alignment:
Q  275 agagagcttatggaaacaacttacgacatgttcataag 312  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  17631079 agagagcttatggaaacaacttatgacatgtccataag 17631116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 321
Target Start/End: Complemental strand, 26185603 - 26185558
Alignment:
Q  276 gagagcttatggaaacaacttacgacatgttcataagttgttttca 321  Q
    ||||| |||| ||||||||||| ||||||| |||||||||||||||    
T  26185603 gagagtttattgaaacaacttatgacatgtgcataagttgttttca 26185558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 322
Target Start/End: Complemental strand, 27146012 - 27145967
Alignment:
Q  277 agagcttatggaaacaacttacgacatgttcataagttgttttcag 322  Q
    |||||||||||||||| |||| ||||||| |||||||| |||||||    
T  27146012 agagcttatggaaacagcttatgacatgtccataagttattttcag 27145967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 31118130 - 31118081
Alignment:
Q  281 cttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||| ||||| |||| ||||||||||| |||||||||||| |||||||    
T  31118130 cttatgaaaacatcttatgacatgttcatcagttgttttcagcttatttc 31118081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 312
Target Start/End: Complemental strand, 32435405 - 32435360
Alignment:
Q  267 actatttgagagagcttatggaaacaacttacgacatgttcataag 312  Q
    |||||||||||||||||||||||||| ||||  | |||||||||||    
T  32435405 actatttgagagagcttatggaaacagcttataagatgttcataag 32435360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 311
Target Start/End: Complemental strand, 1662674 - 1662630
Alignment:
Q  267 actatttgagagagcttatggaaacaacttacgacatgttcataa 311  Q
    |||||||| ||||||||| |||||||||||| ||||||| |||||    
T  1662674 actatttgcgagagcttacggaaacaacttatgacatgtccataa 1662630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 330
Target Start/End: Complemental strand, 26184830 - 26184786
Alignment:
Q  286 ggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||||| |||| ||||||| |||||| |||||||||||||||||    
T  26184830 ggaaacagcttatgacatgtccataagctgttttcagattatttc 26184786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 329
Target Start/End: Original strand, 43722137 - 43722189
Alignment:
Q  277 agagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    |||||||| ||||||||||||||||||||| ||||| | || |||| ||||||    
T  43722137 agagcttacggaaacaacttacgacatgtttataagcttttctcagtttattt 43722189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 330
Target Start/End: Complemental strand, 44251640 - 44251574
Alignment:
Q  267 actatttgagagagcttatggaaacaac---ttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||||||||| |||||| ||||||   ||||||| |||| ||||||| ||||||| |||||||    
T  44251640 actatttgagagaggttatggcaacaacaacttacgacgtgtttataagtttttttcagcttatttc 44251574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 329
Target Start/End: Complemental strand, 49517144 - 49517100
Alignment:
Q  285 tggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    ||||||||||||| ||||||| ||||||| |||||||| ||||||    
T  49517144 tggaaacaacttatgacatgtccataagtggttttcaggttattt 49517100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 266 - 329
Target Start/End: Original strand, 10616509 - 10616572
Alignment:
Q  266 aactatttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    ||||||||| |||||||||||||||||||||| ||||||| | |||||||| ||||| ||||||    
T  10616509 aactatttgggagagcttatggaaacaacttatgacatgtccgtaagttgtgttcagcttattt 10616572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 34939610 - 34939551
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||||||||||||||||||||||||| |||| || | |||||||||||||| |||||||    
T  34939610 tttgagagagcttatggaaacaacttatgacacgtccgtaagttgttttcagcttatttc 34939551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 271 - 329
Target Start/End: Complemental strand, 9027675 - 9027617
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    ||||| |||||||||||||| |||||| ||||||| |||||||||||||||| ||||||    
T  9027675 tttgaaagagcttatggaaataacttatgacatgtccataagttgttttcagcttattt 9027617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 273 - 322
Target Start/End: Original strand, 740861 - 740910
Alignment:
Q  273 tgagagagcttatggaaacaacttacgacatgttcataagttgttttcag 322  Q
    ||||||||||| ||||||||||||| |||||||||||||||| |||||||    
T  740861 tgagagagcttgtggaaacaacttatgacatgttcataagttattttcag 740910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 330
Target Start/End: Original strand, 7931705 - 7931758
Alignment:
Q  277 agagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||||| |||||||||| ||||||||| |||||||||||||| |||||||    
T  7931705 agagcttatgaaaacaacttatgacatgttcttaagttgttttcagcttatttc 7931758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 2460124 - 2460183
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||||||||||||||||||||||||| |||||||   |||||||||||||  |||||||    
T  2460124 tttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttatttc 2460183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 330
Target Start/End: Complemental strand, 4081017 - 4080954
Alignment:
Q  267 actatttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||||||||  ||||| |||||||||| | |||||||||||||||||||||  |||||||    
T  4081017 actatttgagagattttatgaaaacaacttatgccatgttcataagttgttttcaacttatttc 4080954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 2455364 - 2455298
Alignment:
Q  264 gaaactatttgagagagcttatggaaacaacttacgaca-tgttcataagttgttttcagattattt 329  Q
    |||||||||||||||| |||||| ||||||||||  ||| |||| ||||||||||||||| ||||||    
T  2455364 gaaactatttgagagaacttatgaaaacaacttattacattgtttataagttgttttcagcttattt 2455298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 27693408 - 27693462
Alignment:
Q  267 actatttgagagagcttatggaaacaacttacgacatgttcataagttgttttca 321  Q
    |||||||||||||  |||||||||||||||| |||||||||||||| | ||||||    
T  27693408 actatttgagagaatttatggaaacaacttatgacatgttcataagctattttca 27693462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 330
Target Start/End: Complemental strand, 4420734 - 4420681
Alignment:
Q  277 agagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||||||| ||||||| ||| |||||||||||||| ||||||||| |||||||    
T  4420734 agagcttatagaaacaaattatgacatgttcataagctgttttcagcttatttc 4420681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 20377887 - 20377952
Alignment:
Q  265 aaactatttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||||  ||||||||||| |||||||||| |||||||  ||||||||||||| | |||||||    
T  20377887 aaactatttaggagagcttatgaaaacaacttatgacatgtctataagttgttttcggcttatttc 20377952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 322
Target Start/End: Complemental strand, 30863337 - 30863292
Alignment:
Q  277 agagcttatggaaacaacttacgacatgttcataagttgttttcag 322  Q
    |||||||||| |||||||||| ||||||| ||||||||||||||||    
T  30863337 agagcttatgaaaacaacttatgacatgtacataagttgttttcag 30863292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 31667994 - 31667949
Alignment:
Q  201 acaaaccatggagagaagggtgacgacaatctttaccccaaccaat 246  Q
    |||||||||| |||||||||||||||| |||||| |||||||||||    
T  31667994 acaaaccatgaagagaagggtgacgaccatctttcccccaaccaat 31667949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 281821 - 281880
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||| ||||||| |||||| ||||||| |||||||  ||||||||||||||| |||||||    
T  281821 tttgggagagctaatggaagcaacttatgacatgtctataagttgttttcagcttatttc 281880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 2112281 - 2112238
Alignment:
Q  287 gaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||||||||| |||||||||||||||||||||| | |||||||    
T  2112281 gaaacaacttatgacatgttcataagttgttttcggtttatttc 2112238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 330
Target Start/End: Complemental strand, 22743582 - 22743519
Alignment:
Q  267 actatttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||| || ||||||| ||| ||||||||||  ||||||||||||| ||||||||| |||||||    
T  22743582 actatctgtgagagctcatgaaaacaacttattacatgttcataagctgttttcagcttatttc 22743519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 31594357 - 31594408
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcag 322  Q
    |||||||||| |||||||||||||||| ||||||| | ||| ||||||||||    
T  31594357 tttgagagaggttatggaaacaacttatgacatgtccttaatttgttttcag 31594408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 279 - 322
Target Start/End: Original strand, 32386087 - 32386130
Alignment:
Q  279 agcttatggaaacaacttacgacatgttcataagttgttttcag 322  Q
    |||||||||||||| ||||| |||||| ||||||||||||||||    
T  32386087 agcttatggaaacagcttacaacatgtccataagttgttttcag 32386130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 32577959 - 32578018
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||||||||||| |||||||||| ||||||| | | || ||||||||| |||||||    
T  32577959 tttgagagagcttatgaaaacaacttatgacatgtccttgagctgttttcagcttatttc 32578018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 5730779 - 5730737
Alignment:
Q  266 aactatttgagagagcttatggaaacaacttacgacatgttca 308  Q
    |||||||||| |||| |||||||||||||||| ||||||||||    
T  5730779 aactatttgaaagagtttatggaaacaacttatgacatgttca 5730737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 330
Target Start/End: Complemental strand, 6537023 - 6536985
Alignment:
Q  292 aacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  6537023 aacttatgacatgttcataagttgttttcagcttatttc 6536985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 330
Target Start/End: Complemental strand, 8010449 - 8010395
Alignment:
Q  276 gagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||||| ||||||||| | |||||||||||||| | ||||||| |||||||    
T  8010449 gagagcttatagaaacaactcatgacatgttcataagctattttcagtttatttc 8010395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 330
Target Start/End: Complemental strand, 31672166 - 31672113
Alignment:
Q  279 agcttatggaaacaacttacgacatgttcataagttgt--tttcagattatttc 330  Q
    |||||||||||||||||||| ||||| |||||||||||  ||| ||||||||||    
T  31672166 agcttatggaaacaacttacaacatggtcataagttgtgcttttagattatttc 31672113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 329
Target Start/End: Original strand, 33832250 - 33832304
Alignment:
Q  275 agagagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    ||||| |||||| |||||||||| |||||||| |||||||||||| || ||||||    
T  33832250 agagaacttatgaaaacaacttatgacatgtttataagttgtttttagcttattt 33832304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 4006818 - 4006753
Alignment:
Q  264 gaaactatttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    |||||| ||||  ||||||| || ||||||||||||| |||| |||||||| ||||||| ||||||    
T  4006818 gaaactctttggaagagcttgtgaaaacaacttacgatatgtccataagttattttcagcttattt 4006753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 312
Target Start/End: Original strand, 20368149 - 20368194
Alignment:
Q  267 actatttgagagagcttatggaaacaacttacgacatgttcataag 312  Q
    |||||||| |||| |||||| |||||||||| ||||||||||||||    
T  20368149 actatttgggagaacttatgaaaacaacttatgacatgttcataag 20368194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 321
Target Start/End: Complemental strand, 30523751 - 30523706
Alignment:
Q  276 gagagcttatggaaacaacttacgacatgttcataagttgttttca 321  Q
    |||| ||||||||||||||||| | |||||||||||| ||||||||    
T  30523751 gagatcttatggaaacaacttatgccatgttcataagctgttttca 30523706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 32917294 - 32917253
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataag 312  Q
    |||| |||||||||||||||||||||| ||||||| ||||||    
T  32917294 tttgggagagcttatggaaacaacttatgacatgtccataag 32917253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 34404640 - 34404603
Alignment:
Q  268 ctatttgagagagcttatggaaacaacttacgacatgt 305  Q
    ||||||| |||||||||||||||||||||| |||||||    
T  34404640 ctatttgggagagcttatggaaacaacttatgacatgt 34404603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 733145 - 733201
Alignment:
Q  266 aactatttgagagagcttatggaaacaacttacgacatgttcataagttgttttcag 322  Q
    |||| ||||| |||||| ||||||| |||||| ||||||| || |||||||||||||    
T  733145 aactctttgatagagctgatggaaataacttatgacatgtccacaagttgttttcag 733201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 330
Target Start/End: Complemental strand, 6014621 - 6014573
Alignment:
Q  282 ttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||||||||||| |||| || |||||| |||||| ||||||||||    
T  6014621 ttatggaaacaacttatgacaggtgcataagctgttttgagattatttc 6014573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 30865576 - 30865532
Alignment:
Q  275 agagagcttatggaaacaacttacgacatgttcataagttgtttt 319  Q
    |||||||||||||||| |||||| |||||| ||| ||||||||||    
T  30865576 agagagcttatggaaataacttatgacatgatcaaaagttgtttt 30865532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 329
Target Start/End: Complemental strand, 31421036 - 31420984
Alignment:
Q  277 agagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    |||||||||| ||||||||||   ||| |||||||||||||||||| ||||||    
T  31421036 agagcttatgaaaacaacttatcgcatattcataagttgttttcagcttattt 31420984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 33089607 - 33089555
Alignment:
Q  267 actatttgagagagcttatggaaacaacttacgacatgttcataagttgtttt 319  Q
    ||||||| ||||| |||||| ||||| |||| |||||||| ||||||||||||    
T  33089607 actatttcagagaacttatgaaaacagcttaggacatgtttataagttgtttt 33089555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 319
Target Start/End: Original strand, 33500453 - 33500501
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgtttt 319  Q
    |||||| ||||||||| |||||| ||| ||||||| |||||||||||||    
T  33500453 tttgagggagcttatgaaaacaatttatgacatgtgcataagttgtttt 33500501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 330
Target Start/End: Complemental strand, 1810078 - 1810015
Alignment:
Q  267 actatttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||||||||||||| |||||||||||| ||||||| ||| |||||||||| | |||||||    
T  1810078 actatttgagagagcttacggaaacaacttatgacatgtccatgagttgttttctgcttatttc 1810015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 37273231 - 37273172
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||| |||||||||||||||||||||| ||||||| |||||||||||||||  |||||||    
T  37273231 tttgggagagcttatggaaacaacttatgacatgtccataagttgttttcaacttatttc 37273172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 41724299 - 41724251
Alignment:
Q  281 cttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    ||||||||||||||||| ||||||| |||||||||||||||| ||||||    
T  41724299 cttatggaaacaacttatgacatgtccataagttgttttcagcttattt 41724251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 271 - 327
Target Start/End: Original strand, 42817195 - 42817251
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattat 327  Q
    |||||||||||||||||||||| | || ||||||| |||||||||||||||| ||||    
T  42817195 tttgagagagcttatggaaacagcatatgacatgtccataagttgttttcagcttat 42817251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 330
Target Start/End: Complemental strand, 43115147 - 43115094
Alignment:
Q  277 agagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||| |||||||||||||||| ||||||| ||||| |||||||||| |||||||    
T  43115147 agagtttatggaaacaacttatgacatgtccataacttgttttcagcttatttc 43115094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 50004739 - 50004690
Alignment:
Q  281 cttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||||||||||||||| ||||||||| |||| ||||||||| |||||||    
T  50004739 cttatggaaacaacttatgacatgttcttaagctgttttcagcttatttc 50004690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 321
Target Start/End: Original strand, 1217767 - 1217823
Alignment:
Q  265 aaactatttgagagagcttatggaaacaacttacgacatgttcataagttgttttca 321  Q
    ||||||||||  |||||||| ||||||| |||| ||||||| |||||||||||||||    
T  1217767 aaactatttggaagagcttacggaaacagcttatgacatgtccataagttgttttca 1217823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 327
Target Start/End: Original strand, 11039312 - 11039368
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattat 327  Q
    ||||| ||||||||||||||||  ||| ||||||| |||||||||||||||| ||||    
T  11039312 tttgaaagagcttatggaaacatattatgacatgtccataagttgttttcagcttat 11039368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 326
Target Start/End: Complemental strand, 30750099 - 30750042
Alignment:
Q  267 actatttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagatta 326  Q
    |||||||||||||||  ||| |||||||||| ||||||| |||||| |||||||||||||    
T  30750099 actatttgagagagc--atgaaaacaacttatgacatgtccataagctgttttcagatta 30750042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 330
Target Start/End: Complemental strand, 36200190 - 36200134
Alignment:
Q  274 gagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||||| || || |||||||||| ||||||| |||||||||||||||| |||||||    
T  36200190 gagagagtttttgtaaacaacttatgacatgtccataagttgttttcagcttatttc 36200134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 330
Target Start/End: Complemental strand, 42745124 - 42745076
Alignment:
Q  282 ttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||| |||||||||| |||||||||||||||||||||||  |||||||    
T  42745124 ttatgtaaacaacttatgacatgttcataagttgttttcatcttatttc 42745076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 319
Target Start/End: Original strand, 2304237 - 2304292
Alignment:
Q  264 gaaactatttgagagagcttatggaaacaacttacgacatgttcataagttgtttt 319  Q
    ||||||||||||||||  ||||| || ||||||| |||||||||||||| ||||||    
T  2304237 gaaactatttgagagaaattatgaaagcaacttatgacatgttcataagctgtttt 2304292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 21574587 - 21574528
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||| ||||||||||| |||||||||| |||||||||||||| || ||| || |||||||    
T  21574587 tttgggagagcttatgaaaacaacttatgacatgttcataagctgcttttagcttatttc 21574528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 330
Target Start/End: Complemental strand, 29771939 - 29771876
Alignment:
Q  267 actatttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||  |||||||||  ||||||||||| ||||||| |||||||||||||||  |||||||    
T  29771939 actatttatgagagcttaaagaaacaacttaggacatgtccataagttgttttcaacttatttc 29771876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 330
Target Start/End: Original strand, 36646351 - 36646414
Alignment:
Q  267 actatttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||| |||||||||||||||| ||||| | ||||| |||||| ||||||||  |||||||    
T  36646351 actatttgggagagcttatggaaaccacttatggcatgtccataagctgttttcatcttatttc 36646414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 321
Target Start/End: Complemental strand, 24281144 - 24281094
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttca 321  Q
    |||||||||||||||| |||||||||| || || | |||||||||||||||    
T  24281144 tttgagagagcttatgaaaacaacttatgatatctccataagttgttttca 24281094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 322
Target Start/End: Original strand, 44747152 - 44747198
Alignment:
Q  276 gagagcttatggaaacaacttacgacatgttcataagttgttttcag 322  Q
    |||| ||||||||||||  ||| ||||||||||||||||||||||||    
T  44747152 gagatcttatggaaacagtttatgacatgttcataagttgttttcag 44747198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 330
Target Start/End: Original strand, 26330302 - 26330355
Alignment:
Q  277 agagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||||| |||||||||  |||||||||||| ||| ||||||| |||||||    
T  26330302 agagcttatgaaaacaacttctgacatgttcataggttcttttcaggttatttc 26330355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 297
Target Start/End: Original strand, 49845506 - 49845539
Alignment:
Q  264 gaaactatttgagagagcttatggaaacaactta 297  Q
    ||||||||||| ||||||||||||||||||||||    
T  49845506 gaaactatttgggagagcttatggaaacaactta 49845539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 20192581 - 20192629
Alignment:
Q  273 tgagagagcttatggaaacaacttacgacatgttcataagttgttttca 321  Q
    ||||||||||||| |||||| |||| ||||||| |||||| ||||||||    
T  20192581 tgagagagcttatagaaacagcttatgacatgtccataagctgttttca 20192629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 24158482 - 24158518
Alignment:
Q  264 gaaactatttgagagagcttatggaaacaacttacga 300  Q
    |||||| |||| |||||||||||||||||||||||||    
T  24158482 gaaactgtttgcgagagcttatggaaacaacttacga 24158518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 330
Target Start/End: Complemental strand, 37825212 - 37825160
Alignment:
Q  279 agcttatggaaacaa-cttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||||||||||| | |||| ||||||| |||||||||||||||| |||||||    
T  37825212 agcttatggaaacgagcttatgacatgtccataagttgttttcaggttatttc 37825160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 319
Target Start/End: Original strand, 40880921 - 40880969
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgtttt 319  Q
    |||||||||||||||| |||||||||| ||||||  | |||||||||||    
T  40880921 tttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 40880969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 319
Target Start/End: Original strand, 47249459 - 47249507
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgtttt 319  Q
    ||||| ||| |||||| |||| ||||| |||||||||||||||||||||    
T  47249459 tttgaaagaacttatgaaaaccacttatgacatgttcataagttgtttt 47249507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 314
Target Start/End: Complemental strand, 12785964 - 12785917
Alignment:
Q  267 actatttgagagagcttatggaaacaacttacgacatgttcataagtt 314  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||    
T  12785964 actatttgagagagcttacggaaacaacttacgacatgtccataagtt 12785917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 330
Target Start/End: Original strand, 41809224 - 41809277
Alignment:
Q  277 agagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||||| ||||||||||||| ||||||||||||||||||||| || |||||||    
T  41809224 agagcttgtggaaacaacttatgacatgttcataagttgtttttagcttatttc 41809277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 320
Target Start/End: Original strand, 9878661 - 9878704
Alignment:
Q  277 agagcttatggaaacaacttacgacatgttcataagttgttttc 320  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||    
T  9878661 agagcttatggaaacaacttatgacatgtccataagttgttttc 9878704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 329
Target Start/End: Original strand, 30538153 - 30538204
Alignment:
Q  278 gagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    |||||||| ||||||||||| ||||||| |||||||||||||||| ||||||    
T  30538153 gagcttatagaaacaacttatgacatgtccataagttgttttcagcttattt 30538204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 329
Target Start/End: Complemental strand, 45314966 - 45314907
Alignment:
Q  270 atttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    |||||||||| |||||| |||||||||| ||||| || ||||||||||||||| ||||||    
T  45314966 atttgagagaacttatgtaaacaacttatgacatatttataagttgttttcagtttattt 45314907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 329
Target Start/End: Complemental strand, 15120280 - 15120222
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    |||| |||||||||||||||||||||| ||||||||||| || |||||| || ||||||    
T  15120280 tttgggagagcttatggaaacaacttatgacatgttcattagctgttttaagcttattt 15120222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 330
Target Start/End: Original strand, 43065428 - 43065482
Alignment:
Q  276 gagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||||||||| |||||||||| ||||||| ||||| |||||||||| |||||||    
T  43065428 gagagcttatgaaaacaacttatgacatgtccataaattgttttcagcttatttc 43065482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 267 - 312
Target Start/End: Original strand, 1742001 - 1742046
Alignment:
Q  267 actatttgagagagcttatggaaacaacttacgacatgttcataag 312  Q
    |||||||| |||||||||||||||||||||| ||||||| ||||||    
T  1742001 actatttgggagagcttatggaaacaacttatgacatgtgcataag 1742046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 330
Target Start/End: Original strand, 3235363 - 3235416
Alignment:
Q  277 agagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||||||||||||||  ||||| ||||||||| ||||||||| |||||||    
T  3235363 agagcttatggaaacaactagcgacaggttcataagctgttttcagcttatttc 3235416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 4550844 - 4550803
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataag 312  Q
    |||| |||||||||||||||||||||| ||||||||||||||    
T  4550844 tttgggagagcttatggaaacaacttatgacatgttcataag 4550803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 328
Target Start/End: Original strand, 32614925 - 32614978
Alignment:
Q  275 agagagcttatggaaacaacttacgacatgttcataagttgttttcagattatt 328  Q
    ||||| |||||  |||||||||| |||||||||||| |||||||||||||||||    
T  32614925 agagaacttataaaaacaacttatgacatgttcatatgttgttttcagattatt 32614978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 37766900 - 37766847
Alignment:
Q  267 actatttgagagagcttatggaaacaacttacgacatgttcataagttgttttc 320  Q
    |||||||||||||||||| ||||||  |||| |||||||||||| |||||||||    
T  37766900 actatttgagagagcttacggaaacggcttatgacatgttcatatgttgttttc 37766847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 318
Target Start/End: Complemental strand, 29936083 - 29936043
Alignment:
Q  278 gagcttatggaaacaacttacgacatgttcataagttgttt 318  Q
    |||||||||||||||||||| ||||||| ||||||||||||    
T  29936083 gagcttatggaaacaacttaagacatgtccataagttgttt 29936043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 330
Target Start/End: Original strand, 14316114 - 14316177
Alignment:
Q  267 actatttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||  |||||||||||||||||||||| ||||| |  ||||| ||||||||| |||||||    
T  14316114 actattttggagagcttatggaaacaacttatgacatatgtataagctgttttcagcttatttc 14316177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 321
Target Start/End: Complemental strand, 14666633 - 14666595
Alignment:
Q  283 tatggaaacaacttacgacatgttcataagttgttttca 321  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  14666633 tatggaaacaacttatgacatgttcataggttgttttca 14666595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 321
Target Start/End: Complemental strand, 19978044 - 19977994
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttca 321  Q
    ||||||||| ||||| |||||||||||  ||| ||||||||||||||||||    
T  19978044 tttgagagaacttatagaaacaacttataacacgttcataagttgttttca 19977994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 31739954 - 31740004
Alignment:
Q  280 gcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||| ||||||||| | |||||| ||||||| |||||||||||||||||    
T  31739954 gcttatagaaacaactcatgacatgatcataagctgttttcagattatttc 31740004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 33385635 - 33385684
Alignment:
Q  272 ttgagagagcttatggaaacaacttacgacatgttcataagttgttttcag 322  Q
    ||||||||||||||||||||| |||| |||||| ||| |||||||||||||    
T  33385635 ttgagagagcttatggaaacatcttatgacatg-tcaaaagttgttttcag 33385684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 33942249 - 33942196
Alignment:
Q  271 tttgagagagcttatggaaa--caacttacgacatgttcataagttgttttcag 322  Q
    |||||||||||||||||| |  ||||||| |||||||||||||| |||||||||    
T  33942249 tttgagagagcttatggagagacaacttatgacatgttcataagctgttttcag 33942196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 11344736 - 11344793
Alignment:
Q  264 gaaactatttgagagagcttatggaaacaacttacgacatgttcataagttgttttca 321  Q
    |||||| ||||| ||| ||||||||||||||||| ||||||| |||||  ||||||||    
T  11344736 gaaactgtttgacagaccttatggaaacaacttatgacatgtccataaactgttttca 11344793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 330
Target Start/End: Complemental strand, 32821900 - 32821847
Alignment:
Q  277 agagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||| |||| ||||||||||| ||||||| |||||| ||||||||| |||||||    
T  32821900 agagtttatagaaacaacttatgacatgtccataagctgttttcagtttatttc 32821847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 330
Target Start/End: Original strand, 33525942 - 33525999
Alignment:
Q  273 tgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||| | ||||||||||||||  |||||| ||||||||| |||||| |||||||    
T  33525942 tgagagagttcatggaaacaacttataacatgtccataagttggtttcagcttatttc 33525999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 329
Target Start/End: Original strand, 35378994 - 35379047
Alignment:
Q  276 gagagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    ||||||||||| ||||| || | ||| |||||||||||||||||||| ||||||    
T  35378994 gagagcttatgaaaacagctgatgacttgttcataagttgttttcagcttattt 35379047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 44606093 - 44606134
Alignment:
Q  281 cttatggaaacaacttacgacatgttcataagttgttttcag 322  Q
    |||||| |||||||||| ||||||| ||||||||||||||||    
T  44606093 cttatgaaaacaacttatgacatgtccataagttgttttcag 44606134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 330
Target Start/End: Original strand, 1160655 - 1160703
Alignment:
Q  282 ttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||||||||||| || ||||||| ||||||||||||| || |||||||    
T  1160655 ttatggaaacaacctatgacatgtccataagttgtttttagtttatttc 1160703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 329
Target Start/End: Complemental strand, 11063579 - 11063527
Alignment:
Q  277 agagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    ||||||||||||||||  ||| ||||||| ||||||||||||| || ||||||    
T  11063579 agagcttatggaaacatattatgacatgtccataagttgtttttagcttattt 11063527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 330
Target Start/End: Original strand, 34652012 - 34652068
Alignment:
Q  274 gagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||| ||||||| ||||||||||| ||||||| |||||| ||||||||  |||||||    
T  34652012 gagaaagcttatagaaacaacttatgacatgtccataagctgttttcaacttatttc 34652068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 307
Target Start/End: Complemental strand, 43808659 - 43808619
Alignment:
Q  267 actatttgagagagcttatggaaacaacttacgacatgttc 307  Q
    |||||||||||||||||||| ||| |||||| |||||||||    
T  43808659 actatttgagagagcttatgaaaataacttatgacatgttc 43808619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 328
Target Start/End: Original strand, 43910993 - 43911029
Alignment:
Q  292 aacttacgacatgttcataagttgttttcagattatt 328  Q
    |||||| |||||||||||||||||||||||| |||||    
T  43910993 aacttatgacatgttcataagttgttttcagcttatt 43911029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000008; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 265 - 321
Target Start/End: Original strand, 37863921 - 37863977
Alignment:
Q  265 aaactatttgagagagcttatggaaacaacttacgacatgttcataagttgttttca 321  Q
    ||||||||||||||| |||||| ||||| |||| |||| ||||||||||||||||||    
T  37863921 aaactatttgagagaacttatgaaaacagcttatgacacgttcataagttgttttca 37863977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 27123325 - 27123384
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||||||||||||||||||||||||| |||||||   |||||||||||||  |||||||    
T  27123325 tttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttatttc 27123384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 330
Target Start/End: Complemental strand, 1137804 - 1137750
Alignment:
Q  276 gagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||| |||||| ||||| |||| |||||||||||||||||||||||| |||||||    
T  1137804 gagaacttatgaaaacatcttatgacatgttcataagttgttttcagtttatttc 1137750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 329
Target Start/End: Complemental strand, 4691949 - 4691887
Alignment:
Q  267 actatttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    ||||||||||| | ||||||||||||||||| ||||||  |||| ||||||||||| ||||||    
T  4691949 actatttgagaaaacttatggaaacaacttatgacatgcccatatgttgttttcagcttattt 4691887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 305
Target Start/End: Original strand, 7749057 - 7749098
Alignment:
Q  264 gaaactatttgagagagcttatggaaacaacttacgacatgt 305  Q
    ||||||||||| |||||||||||||||||||||| |||||||    
T  7749057 gaaactatttgtgagagcttatggaaacaacttatgacatgt 7749098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 19395042 - 19395103
Alignment:
Q  269 tatttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||||||||| |||||  ||||||||||||||||||| ||||| | ||||||| |||||||    
T  19395042 tatttgagagaacttataaaaacaacttacgacatgtttataagctattttcagcttatttc 19395103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 53034783 - 53034828
Alignment:
Q  282 ttatggaaacaacttacgacatgttcataagttgttttcagattat 327  Q
    ||||| |||||||||||||||||||||||| |||||||||| ||||    
T  53034783 ttatgaaaacaacttacgacatgttcataaattgttttcagcttat 53034828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 329
Target Start/End: Original strand, 33534140 - 33534200
Alignment:
Q  269 tatttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    |||||||||||||||||| |||||| ||  ||||| | |||||||||||||||| ||||||    
T  33534140 tatttgagagagcttatgaaaacaaattgtgacatatccataagttgttttcagcttattt 33534200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 321
Target Start/End: Complemental strand, 2996670 - 2996620
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttca 321  Q
    |||||||||||||||| |||||||||| ||||||| |||||| | ||||||    
T  2996670 tttgagagagcttatgaaaacaacttatgacatgtccataagcttttttca 2996620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 21953048 - 21952986
Alignment:
Q  268 ctatttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||||| ||||||||||||||| |||||| ||||||| |||||  |||||| || |||||||    
T  21953048 ctatttgggagagcttatggaaagaacttatgacatgtccataacctgtttttagtttatttc 21952986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 319
Target Start/End: Complemental strand, 1966031 - 1965990
Alignment:
Q  278 gagcttatggaaacaacttacgacatgttcataagttgtttt 319  Q
    ||||||||| |||||||||| |||||||||||||| ||||||    
T  1966031 gagcttatgaaaacaacttatgacatgttcataagctgtttt 1965990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 329
Target Start/End: Complemental strand, 8469028 - 8468987
Alignment:
Q  288 aaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    ||||| |||||| ||||| |||||||||||||||||||||||    
T  8469028 aaacatcttacggcatgtccataagttgttttcagattattt 8468987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 297
Target Start/End: Complemental strand, 52428769 - 52428736
Alignment:
Q  264 gaaactatttgagagagcttatggaaacaactta 297  Q
    ||||||||||||||||||||||| ||||||||||    
T  52428769 gaaactatttgagagagcttatgaaaacaactta 52428736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 10812606 - 10812546
Alignment:
Q  270 atttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||||||||||||||||||||||  | ||||| ||| |  ||||||||| |||||||    
T  10812606 atttgagagagcttatggaaacaacttttgtcatgtacatgaactgttttcagcttatttc 10812546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 330
Target Start/End: Complemental strand, 24929579 - 24929531
Alignment:
Q  282 ttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    ||||||||||| |||| | ||||||||||| |||||||||| |||||||    
T  24929579 ttatggaaacagcttatggcatgttcataaattgttttcagcttatttc 24929531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 312
Target Start/End: Complemental strand, 25952917 - 25952873
Alignment:
Q  268 ctatttgagagagcttatggaaacaacttacgacatgttcataag 312  Q
    ||||||||||||| ||||| |||||||||| ||| ||||||||||    
T  25952917 ctatttgagagagtttatgaaaacaacttaagacttgttcataag 25952873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 27725311 - 27725271
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataa 311  Q
    |||||||||||||||||||| |||||| ||||||| |||||    
T  27725311 tttgagagagcttatggaaataacttatgacatgtccataa 27725271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 322
Target Start/End: Original strand, 12682 - 12728
Alignment:
Q  276 gagagcttatggaaacaacttacgacatgttcataagttgttttcag 322  Q
    |||| ||||||||||||||||| ||||||| ||||||||||||||||    
T  12682 gagaccttatggaaacaacttatgacatgtccataagttgttttcag 12728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 279 - 330
Target Start/End: Original strand, 10598 - 10649
Alignment:
Q  279 agcttatggaaacaacttacgacatgttcataagttgttttcagattatttc 330  Q
    |||||||| |||||||| | ||||||| |||||||||||||||| |||||||    
T  10598 agcttatgtaaacaactaatgacatgtccataagttgttttcagcttatttc 10649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 329
Target Start/End: Original strand, 9610 - 9668
Alignment:
Q  271 tttgagagagcttatggaaacaacttacgacatgttcataagttgttttcagattattt 329  Q
    ||||||||| |||||| ||||||||||  ||||||||||||| |||||| || ||||||    
T  9610 tttgagagaacttatgaaaacaacttattacatgttcataagctgtttttagcttattt 9668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University