View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7178_low_11 (Length: 366)

Name: NF7178_low_11
Description: NF7178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7178_low_11
NF7178_low_11
[»] scaffold0108 (1 HSPs)
scaffold0108 (16-366)||(50339-50689)
[»] chr4 (27 HSPs)
chr4 (16-362)||(14993088-14993434)
chr4 (13-366)||(15266978-15267331)
chr4 (16-358)||(18259646-18259988)
chr4 (10-362)||(16150835-16151187)
chr4 (10-362)||(16154981-16155333)
chr4 (25-356)||(15073573-15073904)
chr4 (10-362)||(20893230-20893582)
chr4 (10-345)||(7357466-7357801)
chr4 (2-323)||(53750230-53750551)
chr4 (2-323)||(51603552-51603873)
chr4 (10-362)||(11203953-11204305)
chr4 (17-314)||(3261563-3261860)
chr4 (37-362)||(44658587-44658912)
chr4 (37-344)||(13879335-13879642)
chr4 (112-366)||(8708978-8709232)
chr4 (4-362)||(27903578-27903936)
chr4 (17-317)||(29450303-29450603)
chr4 (111-309)||(14697401-14697599)
chr4 (220-320)||(14300485-14300585)
chr4 (46-242)||(13513585-13513781)
chr4 (111-345)||(8336-8570)
chr4 (111-173)||(18224123-18224185)
chr4 (111-340)||(18604302-18604531)
chr4 (220-326)||(19635542-19635648)
chr4 (283-366)||(14162942-14163025)
chr4 (111-173)||(16248326-16248388)
chr4 (116-345)||(15514-15743)
[»] chr2 (24 HSPs)
chr2 (2-366)||(23274415-23274779)
chr2 (2-362)||(19716278-19716638)
chr2 (2-362)||(19720841-19721201)
chr2 (2-344)||(12577175-12577517)
chr2 (73-362)||(23097279-23097568)
chr2 (37-362)||(28350732-28351057)
chr2 (37-366)||(21901394-21901723)
chr2 (17-355)||(20848426-20848761)
chr2 (4-173)||(11351161-11351330)
chr2 (37-153)||(24657128-24657244)
chr2 (4-173)||(24704932-24705101)
chr2 (10-173)||(22462931-22463094)
chr2 (108-242)||(24817221-24817355)
chr2 (111-242)||(23116440-23116571)
chr2 (111-172)||(23205245-23205306)
chr2 (111-172)||(23676849-23676910)
chr2 (220-320)||(24265407-24265507)
chr2 (220-320)||(10871887-10871987)
chr2 (217-320)||(9338616-9338719)
chr2 (217-320)||(9487250-9487353)
chr2 (283-334)||(22742255-22742306)
chr2 (217-320)||(44382876-44382979)
chr2 (284-362)||(24817101-24817179)
chr2 (118-202)||(19647827-19647911)
[»] chr7 (35 HSPs)
chr7 (13-366)||(12798208-12798558)
chr7 (13-366)||(19150203-19150556)
chr7 (13-366)||(20749602-20749955)
chr7 (10-341)||(14283103-14283434)
chr7 (16-308)||(15099365-15099657)
chr7 (39-325)||(14144879-14145165)
chr7 (16-362)||(14260954-14261300)
chr7 (73-362)||(11385137-11385426)
chr7 (2-362)||(13676632-13676986)
chr7 (10-362)||(16947180-16947532)
chr7 (17-296)||(12712437-12712716)
chr7 (10-362)||(21755601-21755953)
chr7 (13-362)||(12459820-12460169)
chr7 (2-323)||(18050700-18051021)
chr7 (10-362)||(13965376-13965728)
chr7 (43-362)||(26115298-26115617)
chr7 (13-362)||(13024536-13024885)
chr7 (17-314)||(26091554-26091851)
chr7 (17-314)||(40924573-40924870)
chr7 (17-314)||(49155497-49155794)
chr7 (108-343)||(15627810-15628045)
chr7 (37-242)||(12203628-12203833)
chr7 (139-366)||(13004783-13005010)
chr7 (4-323)||(17703224-17703543)
chr7 (10-340)||(11984180-11984510)
chr7 (4-323)||(16726210-16726529)
chr7 (220-320)||(15157832-15157932)
chr7 (2-64)||(14140860-14140922)
chr7 (211-344)||(14043084-14043217)
chr7 (211-344)||(14353114-14353247)
chr7 (46-242)||(9591588-9591784)
chr7 (220-320)||(13689436-13689536)
chr7 (220-320)||(11233988-11234088)
chr7 (220-320)||(18181138-18181238)
chr7 (273-366)||(12203504-12203597)
[»] chr3 (52 HSPs)
chr3 (16-366)||(16825224-16825574)
chr3 (2-355)||(16831484-16831837)
chr3 (2-341)||(16384342-16384681)
chr3 (19-366)||(17494484-17494834)
chr3 (77-362)||(12181239-12181524)
chr3 (10-366)||(14290477-14290833)
chr3 (2-362)||(31692134-31692494)
chr3 (2-362)||(31941723-31942083)
chr3 (16-366)||(35983015-35983365)
chr3 (2-359)||(17189194-17189551)
chr3 (2-359)||(24190124-24190480)
chr3 (16-362)||(12357476-12357822)
chr3 (16-362)||(18131296-18131642)
chr3 (2-323)||(13944844-13945165)
chr3 (2-323)||(8744378-8744699)
chr3 (115-356)||(12857451-12857692)
chr3 (10-362)||(16326656-16327010)
chr3 (17-314)||(10408803-10409100)
chr3 (17-314)||(47126779-47127076)
chr3 (43-314)||(28757180-28757451)
chr3 (73-362)||(11958130-11958419)
chr3 (37-366)||(15230458-15230787)
chr3 (37-366)||(15236326-15236655)
chr3 (13-243)||(13317637-13317867)
chr3 (2-129)||(11949107-11949234)
chr3 (37-211)||(15008684-15008855)
chr3 (271-366)||(2245617-2245712)
chr3 (118-362)||(12508514-12508758)
chr3 (112-206)||(2037017-2037111)
chr3 (112-206)||(2040758-2040852)
chr3 (112-206)||(14039676-14039770)
chr3 (37-162)||(10417194-10417319)
chr3 (37-242)||(11861198-11861403)
chr3 (37-152)||(12501778-12501893)
chr3 (111-366)||(12843059-12843314)
chr3 (111-317)||(16803952-16804158)
chr3 (211-320)||(3688959-3689068)
chr3 (220-320)||(10008625-10008725)
chr3 (220-320)||(10909235-10909335)
chr3 (111-347)||(15262549-15262785)
chr3 (220-320)||(15713061-15713161)
chr3 (217-323)||(6603757-6603863)
chr3 (111-173)||(23079166-23079228)
chr3 (277-362)||(10416994-10417079)
chr3 (106-242)||(23414870-23415006)
chr3 (217-320)||(6597077-6597180)
chr3 (217-320)||(13255712-13255815)
chr3 (217-320)||(16638795-16638898)
chr3 (217-320)||(43165697-43165800)
chr3 (111-173)||(15065990-15066052)
chr3 (285-327)||(23079012-23079054)
chr3 (277-362)||(13317518-13317603)
[»] scaffold0017 (2 HSPs)
scaffold0017 (39-366)||(4174-4500)
scaffold0017 (10-153)||(16999-17142)
[»] scaffold0751 (1 HSPs)
scaffold0751 (13-366)||(5412-5764)
[»] scaffold0020 (2 HSPs)
scaffold0020 (2-362)||(98307-98667)
scaffold0020 (25-356)||(176230-176561)
[»] scaffold1433 (1 HSPs)
scaffold1433 (28-366)||(1031-1369)
[»] scaffold0404 (1 HSPs)
scaffold0404 (28-366)||(7990-8328)
[»] scaffold0067 (4 HSPs)
scaffold0067 (70-366)||(29912-30208)
scaffold0067 (7-341)||(64347-64681)
scaffold0067 (7-362)||(48904-49259)
scaffold0067 (7-362)||(57938-58293)
[»] scaffold0156 (1 HSPs)
scaffold0156 (16-362)||(37173-37519)
[»] scaffold0434 (1 HSPs)
scaffold0434 (111-366)||(5622-5877)
[»] scaffold0011 (1 HSPs)
scaffold0011 (16-366)||(153726-154076)
[»] chr6 (29 HSPs)
chr6 (2-362)||(14376782-14377142)
chr6 (2-359)||(18797745-18798102)
chr6 (2-362)||(19438057-19438417)
chr6 (73-362)||(21566857-21567146)
chr6 (73-305)||(24515337-24515569)
chr6 (117-356)||(25771014-25771253)
chr6 (19-362)||(19456095-19456438)
chr6 (19-362)||(19466240-19466583)
chr6 (10-356)||(21474663-21474993)
chr6 (13-362)||(10465714-10466063)
chr6 (17-296)||(34642517-34642797)
chr6 (87-366)||(19486156-19486435)
chr6 (46-299)||(24367499-24367752)
chr6 (112-366)||(8720567-8720821)
chr6 (4-323)||(15462393-15462712)
chr6 (112-366)||(16813805-16814059)
chr6 (37-362)||(20010367-20010693)
chr6 (111-344)||(30677908-30678141)
chr6 (108-347)||(18660080-18660319)
chr6 (139-366)||(19881588-19881815)
chr6 (111-366)||(23081587-23081842)
chr6 (220-320)||(5836139-5836239)
chr6 (117-345)||(25958636-25958864)
chr6 (10-153)||(27559044-27559187)
chr6 (111-173)||(21764976-21765038)
chr6 (220-320)||(2871713-2871813)
chr6 (284-344)||(23084709-23084769)
chr6 (285-327)||(22437207-22437249)
chr6 (220-266)||(22829351-22829397)
[»] chr1 (29 HSPs)
chr1 (19-366)||(22015534-22015881)
chr1 (16-362)||(19857525-19857871)
chr1 (43-362)||(21738829-21739148)
chr1 (16-366)||(21742341-21742691)
chr1 (2-359)||(20832697-20833053)
chr1 (10-362)||(21961272-21961624)
chr1 (13-362)||(24096408-24096757)
chr1 (17-362)||(31536790-31537135)
chr1 (1-323)||(20074541-20074863)
chr1 (10-362)||(52988986-52989337)
chr1 (17-344)||(20297635-20297962)
chr1 (17-362)||(38909619-38909964)
chr1 (17-314)||(48426125-48426422)
chr1 (43-344)||(18273045-18273346)
chr1 (43-314)||(37680327-37680598)
chr1 (37-362)||(20853553-20853878)
chr1 (108-344)||(16379406-16379642)
chr1 (111-242)||(21228469-21228600)
chr1 (4-150)||(22435738-22435884)
chr1 (211-320)||(16347433-16347542)
chr1 (211-320)||(16354081-16354190)
chr1 (220-320)||(51330330-51330430)
chr1 (220-320)||(21833723-21833823)
chr1 (191-366)||(21044943-21045118)
chr1 (211-314)||(41350512-41350615)
chr1 (220-266)||(19109791-19109837)
chr1 (111-173)||(24784839-24784901)
chr1 (113-242)||(17041929-17042057)
chr1 (286-362)||(20921929-20922005)
[»] scaffold0053 (3 HSPs)
scaffold0053 (43-362)||(62496-62815)
scaffold0053 (194-366)||(65042-65214)
scaffold0053 (73-173)||(65211-65311)
[»] scaffold0035 (1 HSPs)
scaffold0035 (19-362)||(6042-6384)
[»] scaffold0106 (1 HSPs)
scaffold0106 (16-366)||(34571-34921)
[»] scaffold2062 (1 HSPs)
scaffold2062 (2-362)||(596-956)
[»] scaffold0664 (1 HSPs)
scaffold0664 (10-362)||(7266-7618)
[»] scaffold0235 (2 HSPs)
scaffold0235 (2-362)||(8186-8546)
scaffold0235 (2-362)||(18400-18760)
[»] scaffold1032 (1 HSPs)
scaffold1032 (19-366)||(535-882)
[»] scaffold0266 (1 HSPs)
scaffold0266 (16-355)||(16871-17210)
[»] scaffold0031 (1 HSPs)
scaffold0031 (94-366)||(115936-116208)
[»] scaffold0765 (1 HSPs)
scaffold0765 (2-341)||(6002-6341)
[»] scaffold0054 (1 HSPs)
scaffold0054 (23-366)||(63259-63582)
[»] scaffold0005 (1 HSPs)
scaffold0005 (2-341)||(263446-263785)
[»] scaffold0003 (2 HSPs)
scaffold0003 (2-341)||(203601-203940)
scaffold0003 (2-314)||(424528-424840)
[»] scaffold0239 (1 HSPs)
scaffold0239 (2-335)||(9538-9871)
[»] scaffold0222 (2 HSPs)
scaffold0222 (2-362)||(211-571)
scaffold0222 (8-362)||(21040-21394)
[»] scaffold0046 (1 HSPs)
scaffold0046 (16-366)||(70342-70692)
[»] chr5 (45 HSPs)
chr5 (111-362)||(21870181-21870432)
chr5 (111-362)||(21874461-21874712)
chr5 (73-366)||(23563067-23563360)
chr5 (2-341)||(17266258-17266597)
chr5 (13-362)||(23077808-23078157)
chr5 (2-317)||(22505784-22506099)
chr5 (17-362)||(20345402-20345747)
chr5 (10-317)||(25851185-25851492)
chr5 (37-356)||(23669772-23670091)
chr5 (17-314)||(14883942-14884239)
chr5 (114-366)||(21983076-21983328)
chr5 (114-366)||(21560924-21561176)
chr5 (37-356)||(43122607-43122926)
chr5 (37-206)||(22465090-22465259)
chr5 (112-206)||(16258095-16258189)
chr5 (112-206)||(22591814-22591908)
chr5 (112-206)||(22595369-22595463)
chr5 (43-243)||(20779059-20779259)
chr5 (111-366)||(23474426-23474681)
chr5 (46-162)||(28892045-28892161)
chr5 (37-172)||(20824593-20824728)
chr5 (11-173)||(18782246-18782408)
chr5 (37-314)||(23461129-23461406)
chr5 (37-173)||(20803755-20803891)
chr5 (220-320)||(22329835-22329935)
chr5 (273-362)||(28891845-28891934)
chr5 (220-320)||(14996687-14996787)
chr5 (220-320)||(19773298-19773398)
chr5 (220-320)||(27682348-27682448)
chr5 (217-320)||(27521741-27521844)
chr5 (220-311)||(27613694-27613785)
chr5 (111-345)||(26735648-26735882)
chr5 (220-320)||(29473021-29473121)
chr5 (217-320)||(16359837-16359940)
chr5 (287-366)||(21331888-21331967)
chr5 (118-317)||(21410373-21410572)
chr5 (283-362)||(21631302-21631381)
chr5 (10-173)||(23526182-23526345)
chr5 (285-344)||(25429826-25429885)
chr5 (217-320)||(34569829-34569932)
chr5 (220-314)||(37288450-37288544)
chr5 (277-362)||(20770518-20770603)
chr5 (273-362)||(20779289-20779378)
chr5 (273-362)||(20824829-20824918)
chr5 (273-337)||(22465326-22465390)
[»] scaffold0335 (1 HSPs)
scaffold0335 (16-366)||(4024-4374)
[»] scaffold0074 (1 HSPs)
scaffold0074 (2-362)||(15292-15652)
[»] scaffold0490 (1 HSPs)
scaffold0490 (139-366)||(3222-3449)
[»] chr8 (27 HSPs)
chr8 (2-325)||(22054120-22054443)
chr8 (10-366)||(21928693-21929049)
chr8 (10-366)||(19985445-19985801)
chr8 (2-341)||(22027465-22027804)
chr8 (25-356)||(22374149-22374480)
chr8 (10-326)||(16268424-16268740)
chr8 (17-345)||(28984183-28984511)
chr8 (13-335)||(31413723-31414045)
chr8 (113-344)||(20391454-20391685)
chr8 (13-362)||(29300590-29300939)
chr8 (37-344)||(6606651-6606958)
chr8 (10-320)||(22043092-22043402)
chr8 (111-366)||(22523876-22524131)
chr8 (46-173)||(30310497-30310624)
chr8 (284-366)||(21970711-21970793)
chr8 (284-366)||(22004241-22004323)
chr8 (220-323)||(18860049-18860152)
chr8 (111-242)||(32603511-32603642)
chr8 (220-320)||(22126168-22126268)
chr8 (106-242)||(15536744-15536880)
chr8 (211-314)||(19481287-19481390)
chr8 (111-173)||(21391214-21391276)
chr8 (111-173)||(21780540-21780602)
chr8 (226-320)||(22117384-22117478)
chr8 (220-366)||(22990520-22990666)
chr8 (45-153)||(22031403-22031510)
chr8 (285-329)||(22421090-22421134)
[»] scaffold0056 (1 HSPs)
scaffold0056 (16-366)||(603-953)
[»] scaffold0151 (1 HSPs)
scaffold0151 (73-366)||(262-555)
[»] scaffold0102 (1 HSPs)
scaffold0102 (73-366)||(42989-43282)
[»] scaffold0114 (2 HSPs)
scaffold0114 (2-335)||(40278-40611)
scaffold0114 (4-173)||(17262-17431)
[»] scaffold0034 (4 HSPs)
scaffold0034 (40-341)||(11651-11952)
scaffold0034 (16-362)||(1676-2022)
scaffold0034 (4-362)||(70594-70952)
scaffold0034 (121-242)||(122020-122141)
[»] scaffold0072 (1 HSPs)
scaffold0072 (10-362)||(54275-54627)
[»] scaffold0523 (2 HSPs)
scaffold0523 (13-362)||(5671-6017)
scaffold0523 (17-345)||(11484-11812)
[»] scaffold0026 (1 HSPs)
scaffold0026 (13-366)||(51882-52235)
[»] scaffold0348 (2 HSPs)
scaffold0348 (2-314)||(4621-4933)
scaffold0348 (2-355)||(17215-17568)
[»] scaffold0004 (3 HSPs)
scaffold0004 (73-362)||(319534-319823)
scaffold0004 (2-227)||(325927-326151)
scaffold0004 (37-225)||(200338-200526)
[»] scaffold0058 (1 HSPs)
scaffold0058 (2-362)||(22342-22702)
[»] scaffold0010 (4 HSPs)
scaffold0010 (16-344)||(39075-39403)
scaffold0010 (37-157)||(180768-180888)
scaffold0010 (10-242)||(14652-14884)
scaffold0010 (277-362)||(180563-180648)
[»] scaffold0023 (2 HSPs)
scaffold0023 (2-362)||(164125-164485)
scaffold0023 (111-173)||(30487-30549)
[»] scaffold0261 (2 HSPs)
scaffold0261 (16-366)||(12134-12482)
scaffold0261 (16-366)||(20314-20662)
[»] scaffold1056 (1 HSPs)
scaffold1056 (10-366)||(1949-2303)
[»] scaffold0420 (1 HSPs)
scaffold0420 (2-359)||(8834-9191)
[»] scaffold0104 (1 HSPs)
scaffold0104 (10-366)||(43139-43495)
[»] scaffold0076 (1 HSPs)
scaffold0076 (2-362)||(53147-53507)
[»] scaffold0146 (1 HSPs)
scaffold0146 (16-299)||(71-354)
[»] scaffold0192 (1 HSPs)
scaffold0192 (79-341)||(29824-30086)
[»] scaffold0476 (1 HSPs)
scaffold0476 (73-362)||(269-558)
[»] scaffold0317 (1 HSPs)
scaffold0317 (2-362)||(2851-3205)
[»] scaffold1530 (1 HSPs)
scaffold1530 (77-362)||(799-1084)
[»] scaffold1299 (1 HSPs)
scaffold1299 (73-362)||(1572-1861)
[»] scaffold0706 (1 HSPs)
scaffold0706 (2-362)||(4933-5293)
[»] scaffold1517 (1 HSPs)
scaffold1517 (13-362)||(1211-1560)
[»] scaffold1426 (1 HSPs)
scaffold1426 (10-362)||(1331-1683)
[»] scaffold0243 (2 HSPs)
scaffold0243 (7-362)||(9498-9851)
scaffold0243 (289-345)||(23686-23742)
[»] scaffold0118 (1 HSPs)
scaffold0118 (10-362)||(689-1041)
[»] scaffold0167 (1 HSPs)
scaffold0167 (16-362)||(5287-5633)
[»] scaffold0310 (1 HSPs)
scaffold0310 (10-362)||(11205-11557)
[»] scaffold0405 (1 HSPs)
scaffold0405 (4-366)||(5824-6186)
[»] scaffold0367 (1 HSPs)
scaffold0367 (16-362)||(8745-9091)
[»] scaffold0029 (4 HSPs)
scaffold0029 (17-242)||(115797-116022)
scaffold0029 (37-157)||(93823-93943)
scaffold0029 (277-362)||(93618-93703)
scaffold0029 (220-320)||(107543-107643)
[»] scaffold0001 (2 HSPs)
scaffold0001 (10-362)||(514077-514429)
scaffold0001 (284-347)||(442154-442217)
[»] scaffold0865 (1 HSPs)
scaffold0865 (115-366)||(992-1243)
[»] scaffold0133 (1 HSPs)
scaffold0133 (115-366)||(28005-28256)
[»] scaffold0188 (1 HSPs)
scaffold0188 (121-362)||(33096-33337)
[»] scaffold0203 (2 HSPs)
scaffold0203 (10-176)||(764-930)
scaffold0203 (217-362)||(3775-3920)
[»] scaffold0041 (1 HSPs)
scaffold0041 (17-314)||(41970-42267)
[»] scaffold0009 (2 HSPs)
scaffold0009 (13-362)||(251850-252199)
scaffold0009 (111-173)||(229765-229827)
[»] scaffold1845 (1 HSPs)
scaffold1845 (85-362)||(1028-1305)
[»] scaffold2165 (1 HSPs)
scaffold2165 (10-362)||(527-879)
[»] scaffold0068 (1 HSPs)
scaffold0068 (17-341)||(66853-67177)
[»] scaffold0276 (1 HSPs)
scaffold0276 (43-314)||(23695-23966)
[»] scaffold0585 (2 HSPs)
scaffold0585 (171-356)||(591-775)
scaffold0585 (115-176)||(3999-4060)
[»] scaffold0100 (1 HSPs)
scaffold0100 (111-344)||(16351-16584)
[»] scaffold1914 (1 HSPs)
scaffold1914 (70-320)||(996-1246)
[»] scaffold0190 (1 HSPs)
scaffold0190 (73-335)||(30077-30339)
[»] scaffold0609 (2 HSPs)
scaffold0609 (136-344)||(7911-8119)
scaffold0609 (37-211)||(1194-1368)
[»] scaffold0518 (1 HSPs)
scaffold0518 (149-314)||(2198-2363)
[»] scaffold0708 (1 HSPs)
scaffold0708 (13-233)||(4998-5218)
[»] scaffold0079 (1 HSPs)
scaffold0079 (10-242)||(36726-36958)
[»] scaffold0679 (1 HSPs)
scaffold0679 (271-366)||(755-850)
[»] scaffold0098 (1 HSPs)
scaffold0098 (271-366)||(25949-26044)
[»] scaffold0605 (2 HSPs)
scaffold0605 (37-206)||(1535-1704)
scaffold0605 (273-338)||(1771-1836)
[»] scaffold0586 (1 HSPs)
scaffold0586 (217-365)||(1-149)
[»] scaffold0443 (1 HSPs)
scaffold0443 (43-158)||(12058-12173)
[»] scaffold0546 (1 HSPs)
scaffold0546 (4-173)||(101-270)
[»] scaffold0130 (3 HSPs)
scaffold0130 (37-242)||(3736-3941)
scaffold0130 (4-161)||(7704-7861)
scaffold0130 (283-323)||(7542-7582)
[»] scaffold0109 (1 HSPs)
scaffold0109 (4-173)||(13037-13206)
[»] scaffold0270 (2 HSPs)
scaffold0270 (111-366)||(7202-7457)
scaffold0270 (111-366)||(14332-14587)
[»] scaffold0077 (1 HSPs)
scaffold0077 (111-366)||(57334-57589)
[»] scaffold1881 (1 HSPs)
scaffold1881 (46-326)||(240-520)
[»] scaffold0181 (1 HSPs)
scaffold0181 (37-152)||(28862-28977)
[»] scaffold0180 (2 HSPs)
scaffold0180 (271-366)||(30748-30843)
scaffold0180 (116-204)||(30895-30983)
[»] scaffold0550 (1 HSPs)
scaffold0550 (4-173)||(10071-10240)
[»] scaffold0429 (1 HSPs)
scaffold0429 (108-362)||(1146-1400)
[»] scaffold0044 (2 HSPs)
scaffold0044 (111-242)||(17489-17620)
scaffold0044 (220-314)||(3859-3953)
[»] scaffold0006 (1 HSPs)
scaffold0006 (117-344)||(104561-104788)
[»] scaffold0088 (2 HSPs)
scaffold0088 (208-362)||(30336-30490)
scaffold0088 (73-158)||(30225-30310)
[»] scaffold0018 (2 HSPs)
scaffold0018 (108-242)||(9195-9329)
scaffold0018 (284-362)||(9075-9153)
[»] scaffold0161 (1 HSPs)
scaffold0161 (110-199)||(36156-36245)
[»] scaffold0012 (1 HSPs)
scaffold0012 (101-366)||(216140-216405)
[»] scaffold0282 (2 HSPs)
scaffold0282 (111-347)||(13213-13449)
scaffold0282 (286-362)||(9846-9922)
[»] scaffold1274 (1 HSPs)
scaffold1274 (184-347)||(20-182)
[»] scaffold1220 (1 HSPs)
scaffold1220 (47-158)||(1-112)
[»] scaffold0165 (1 HSPs)
scaffold0165 (160-259)||(12322-12421)
[»] scaffold0040 (1 HSPs)
scaffold0040 (111-366)||(18174-18429)
[»] scaffold0507 (1 HSPs)
scaffold0507 (220-366)||(11466-11612)
[»] scaffold0080 (2 HSPs)
scaffold0080 (47-173)||(10152-10278)
scaffold0080 (47-173)||(12807-12933)
[»] scaffold1423 (2 HSPs)
scaffold1423 (12-173)||(291-452)
scaffold1423 (285-334)||(130-179)
[»] scaffold0505 (1 HSPs)
scaffold0505 (283-344)||(2252-2313)
[»] scaffold0411 (1 HSPs)
scaffold0411 (4-169)||(8633-8798)
[»] scaffold0289 (1 HSPs)
scaffold0289 (93-242)||(99-248)
[»] scaffold0113 (1 HSPs)
scaffold0113 (246-362)||(17703-17819)
[»] scaffold2059 (1 HSPs)
scaffold2059 (111-242)||(613-744)
[»] scaffold0529 (1 HSPs)
scaffold0529 (283-362)||(5589-5668)
[»] scaffold0451 (1 HSPs)
scaffold0451 (10-173)||(13945-14108)
[»] scaffold0177 (2 HSPs)
scaffold0177 (10-173)||(11269-11432)
scaffold0177 (10-173)||(14954-15117)
[»] scaffold0075 (2 HSPs)
scaffold0075 (111-345)||(48059-48293)
scaffold0075 (116-345)||(55212-55441)
[»] scaffold0309 (1 HSPs)
scaffold0309 (13-134)||(12958-13079)
[»] scaffold0305 (1 HSPs)
scaffold0305 (49-150)||(3131-3232)
[»] scaffold0509 (1 HSPs)
scaffold0509 (116-168)||(12162-12214)
[»] scaffold0285 (1 HSPs)
scaffold0285 (46-314)||(5262-5530)
[»] scaffold0207 (1 HSPs)
scaffold0207 (67-143)||(4498-4574)
[»] scaffold0042 (1 HSPs)
scaffold0042 (108-344)||(26678-26914)
[»] scaffold0819 (1 HSPs)
scaffold0819 (113-172)||(445-504)
[»] scaffold0410 (1 HSPs)
scaffold0410 (10-153)||(369-512)
[»] scaffold0293 (1 HSPs)
scaffold0293 (283-366)||(15911-15994)
[»] scaffold0008 (2 HSPs)
scaffold0008 (46-149)||(114-217)
scaffold0008 (111-242)||(139454-139585)
[»] scaffold0457 (1 HSPs)
scaffold0457 (208-362)||(13778-13932)
[»] scaffold0403 (1 HSPs)
scaffold0403 (220-334)||(15349-15463)
[»] scaffold0324 (1 HSPs)
scaffold0324 (220-366)||(2427-2573)
[»] scaffold0273 (2 HSPs)
scaffold0273 (111-173)||(369-431)
scaffold0273 (283-341)||(541-599)
[»] scaffold0019 (1 HSPs)
scaffold0019 (111-153)||(171447-171489)
[»] scaffold0848 (1 HSPs)
scaffold0848 (118-211)||(4874-4967)
[»] scaffold0412 (1 HSPs)
scaffold0412 (47-152)||(15513-15618)
[»] scaffold0357 (1 HSPs)
scaffold0357 (111-143)||(17920-17952)


Alignment Details
Target: scaffold0108 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 16 - 366
Target Start/End: Original strand, 50339 - 50689
Alignment:
Q  16 tcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagt-acaa 114  Q
    ||||||||||| ||||| || ||||| |||||||| |||||||||||   ||| || ||||||||||||||||| || ||||||||||| |  || ||||    
T  50339 tcattgcagttgtagcaaacaatatccccacgcttacaatcagctaaggtgtgtcctttctgaccacacctgaaacacttcttctcatc-tcggtcacaa 50437  T
Q  115 acattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttac 214  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  50438 acattactcttgtggtctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattccatctatgcttac 50537  T
Q  215 cgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcata 314  Q
    | |||||||||||||||||||||||||||  || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  50538 ccttgtcagcaggggcactatacggcttcggaccactctgctgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcttcttcata 50637  T
Q  315 aatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  50638 gatcctacagctgcttaccaactcagaaaagtttcttatcttctgataacca 50689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 227; Significance: 1e-125; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 16 - 362
Target Start/End: Complemental strand, 14993434 - 14993088
Alignment:
Q  16 tcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaa 115  Q
    ||||||||||| ||||| || | ||| ||| ||||||||||||||||   ||| || |||||||||||||||||||| |||||||  ||      |||||    
T  14993434 tcattgcagttgtagcaaacaacatccccatgcttgcaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttcttctcacggtcacaaa 14993335  T
Q  116 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttacc 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  14993334 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattcaatctctgcttacc 14993235  T
Q  216 gttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataa 315  Q
     |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  14993234 cttgtcagcaggggcactatacggcttcagacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcatatcctcttcataa 14993135  T
Q  316 atcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    || || ||||| |||||||| ||||||||||||||||||||||||||    
T  14993134 attctgcaactacttaccaaatcagaaaagtttcttatcttctgata 14993088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 13 - 366
Target Start/End: Original strand, 15266978 - 15267331
Alignment:
Q  13 tcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtac 112  Q
    ||||| |||||||||||||| || || || ||| |||| ||||||||||    ||| || |||||||||||||||||||| |||||||||||  |   ||    
T  15266978 tcttcgttgcagttatagcaaacaatgtctccatgcttacaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctctgtcac 15267077  T
Q  113 aaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgctt 212  Q
    ||||||||||||| ||||| || ||| |||||||||| ||||||||||  ||||||||||||||||||||||||||| |||||||||| || || |||||    
T  15267078 aaacattactcttatggcccttctcatcacacttgaagcaaacaatattcgtaggagcatctctcctcttgggcctcctctcatcatttaacctctgctt 15267177  T
Q  213 accgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttca 312  Q
    ||| ||||||||||| |||||||||||||||  |||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||| |||    
T  15267178 acccttgtcagcaggagcactatacggcttcggacgactctgttgtcccttgcctctgcgttcactcatcaccttgtaatgagctttcgtgtcctcctca 15267277  T
Q  313 taaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    |||||||| || || |||| ||| ||||| ||||||||||| ||||||||||||    
T  15267278 taaatcctgcagctacttatcaaatcagagaagtttcttattttctgataacca 15267331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 16 - 358
Target Start/End: Original strand, 18259646 - 18259988
Alignment:
Q  16 tcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaa 115  Q
    ||||||||||||||||| || || || |||||||| ||||||||||    ||| || |||||||||||||||||||| |||||||||||  ||  |||||    
T  18259646 tcattgcagttatagcaaacaatgtccccacgcttacaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaaa 18259745  T
Q  116 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttacc 215  Q
    ||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||| |||||||||||||| |||||||||| || || ||||||||    
T  18259746 cattactcttgtggcctttttcaccacacttaaagcaaacaatattagtaggagcatctgtcctcttgggcctcctctcatcatttaacctctgcttacc 18259845  T
Q  216 gttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataa 315  Q
     ||||||||||| |||||||||||||||  | ||||||| ||||||||||| |||||||||||||||||||||||||||| ||| ||||| ||||||||     
T  18259846 cttgtcagcaggagcactatacggcttcggatgactctgctgtcccttgcccctacgctcactcatcaccttgtaatgagattttgtatcttcttcatag 18259945  T
Q  316 atcctacaactgcttaccaattcagaaaagtttcttatcttct 358  Q
    |||||  | || ||||| || ||||| ||||||||||| ||||    
T  18259946 atcctgtagctacttactaaatcagagaagtttcttattttct 18259988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 10 - 362
Target Start/End: Original strand, 16150835 - 16151187
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    ||||||||||  ||||||||||| || | |||||||||||||||||||||||    ||| || |||||||||||||||||||| ||||||||||| ||||    
T  16150835 ccctcttcatcacagttatagcaaacaacatcaccacgcttgcaatcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctcatctttag 16150934  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatg 209  Q
    ||||||||||||||||||||||||| || ||||||||  | ||||||||||||  ||||||||||||||||||||||||| |||||||||||||  | ||    
T  16150935 tacaaacattactcttgtggcctttctcgccacacttatagcaaacaatatcaacaggagcatctctcctcttgggcctcctctcatcattcaacttctg 16151034  T
Q  210 cttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctct 309  Q
    ||| || ||||||| ||| |||||||||||||||  ||||||||| ||||| ||||| || || |||||||||||||||||||||||||| || |||||     
T  16151035 ctttcctttgtcagtaggagcactatacggcttcggacgactctgctgtcctttgccccttcgatcactcatcaccttgtaatgagcttttgtgtcctcc 16151134  T
Q  310 tcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    ||||| || || || || |||||||||||||| |||||  | |||||||||||    
T  16151135 tcatagattctgcagctacttaccaattcagagaagttcatgatcttctgata 16151187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 10 - 362
Target Start/End: Original strand, 16154981 - 16155333
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    ||||||||||  ||||||||||| || | |||||||||||||||||||||||    ||| || |||||||||||||||||||| ||||||||||| ||||    
T  16154981 ccctcttcatcacagttatagcaaacaacatcaccacgcttgcaatcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctcatctttag 16155080  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatg 209  Q
    ||||||||||||||||||||||||| || ||||||||  | ||||||||||||  ||||||||||||||||||||||||| |||||||||||||  | ||    
T  16155081 tacaaacattactcttgtggcctttctcgccacacttatagcaaacaatatcaacaggagcatctctcctcttgggcctcctctcatcattcaacttctg 16155180  T
Q  210 cttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctct 309  Q
    ||| || ||||||| ||| |||||||||||||||  ||||||||| ||||| ||||| || || |||||||||||||||||||||||||| || |||||     
T  16155181 ctttcctttgtcagtaggagcactatacggcttcggacgactctgctgtcctttgccccttcgatcactcatcaccttgtaatgagcttttgtgtcctcc 16155280  T
Q  310 tcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    ||||| || || || || |||||||||||||| |||||  | |||||||||||    
T  16155281 tcatagattctgcagctacttaccaattcagagaagttcatgatcttctgata 16155333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 25 - 356
Target Start/End: Original strand, 15073573 - 15073904
Alignment:
Q  25 ttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactct 124  Q
    |||||||| || | ||||| | ||||||||||||||||   ||| || ||||  |||||||| || || |||||||||||      ||| ||||||||||    
T  15073573 ttatagcaaacaacatcacaaagcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttctcatcacggtcacatacattactct 15073672  T
Q  125 tgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagc 224  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| | |||||| |||||||||||| ||| || ||| | ||||||||    
T  15073673 tgtggcctttttcaccacacttgaaacagacaatctcagtaggagcatctctcctcctaggcctcctctcatcattcagtctctgtttaactttgtcagc 15073772  T
Q  225 aggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaa 324  Q
    ||| ||||||||||| |||  ||||||| | |||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||     
T  15073773 aggagcactatacggtttcggacgactcagctgtcccttacctctacgctcactcatcaccttataatgagcttttgtatcctcttcatagatcctacag 15073872  T
Q  325 ctgcttaccaattcagaaaagtttcttatctt 356  Q
    || || ||||| |||||||| || ||||||||    
T  15073873 ctactcaccaaatcagaaaaattccttatctt 15073904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 10 - 362
Target Start/End: Original strand, 20893230 - 20893582
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    ||||||||||||||||| ||| | || ||||| ||||||||||| ||||||||   ||| ||||||||||||||||||||||| ||| |||||||  ||     
T  20893230 ccctcttcattgcagttgtagtagacaatatccccacgcttgcattcagctaaattgtgtcccttctgaccacacctgaagcacttcctctcatctctac 20893329  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatg 209  Q
     ||||||||| ||||||| ||||||||||||||||||| |||||||||| |||| |||||||||||||||||| |||||| | ||||||||||   | ||    
T  20893330 cacaaacattgctcttgttgcctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattcatcttctg 20893429  T
Q  210 cttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctct 309  Q
    ||| || ||||||||||| ||||| || |||||   ||||||||| ||||||||||| || | ||||||||| | ||||||||||||||| || || |||    
T  20893430 ctttcctttgtcagcaggagcactttaaggcttaggacgactctgctgtcccttgcccctcctctcactcattatcttgtaatgagctttggtgtcttct 20893529  T
Q  310 tcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    |  |||||||| |||||| ||||||| |||||||||  ||| |||| ||||||    
T  20893530 ttgtaaatcctgcaactgtttaccaactcagaaaagactctgatctgctgata 20893582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 10 - 345
Target Start/End: Original strand, 7357466 - 7357801
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    |||||| |||||||||| ||||| || || || ||||||||||| ||||||||   ||||||||||||||||||||||||||| ||| ||||||| |||     
T  7357466 ccctctccattgcagttgtagcagacaatgtctccacgcttgcattcagctaaattgtgacccttctgaccacacctgaagcacttcctctcatctttac 7357565  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatg 209  Q
     | ||||||| |||||||||||||| ||||||| |||| |||||||||| |||| ||||||||||||||||||||||||| | ||||||  ||   | ||    
T  7357566 cataaacattgctcttgtggcctttctcaccactcttgtaacaaacaatctcagcaggagcatctctcctcttgggcctcctatcatcacccatcttctg 7357665  T
Q  210 cttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctct 309  Q
    ||| || ||||||||||| ||| | || |||||   |||| ||||||||||||| || || | ||||||||| | |||||||||||| || || || |||    
T  7357666 ctttcctttgtcagcaggagcaatgtaaggcttaggacgattctgttgtcccttacccctcctctcactcattatcttgtaatgagccttggtgtcttct 7357765  T
Q  310 tcataaatcctacaactgcttaccaattcagaaaag 345  Q
    |||||||||||||| ||| | ||||| |||||||||    
T  7357766 tcataaatcctacacctgttaaccaactcagaaaag 7357801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 2 - 323
Target Start/End: Complemental strand, 53750551 - 53750230
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    ||||||||||||||||||| || ||||||||||| | |||||| ||||||||||| |||| || |||||||||||| ||||| ||||| || ||||||||    
T  53750551 tgatgtggccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctc 53750452  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    |||||| |||||||| ||||||||||| ||||| || |||||||| || || || || |||| ||||||||| ||| |  | |||||| ||||||||||     
T  53750451 atccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcatta 53750352  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    | ||| |||||||| || ||||  |||||||||||||| ||   |||| |||| |||||||| ||||| |||||||||||||| || ||||||||||| |    
T  53750351 agtctctgcttacccttatcagtcggggcactatacggtttaggacgattctgatgtcccttacctcttcgctcactcatcactttataatgagctttgg 53750252  T
Q  302 tatcctcttcataaatcctaca 323  Q
    | ||||| || || ||||||||    
T  53750251 tgtcctcctcgtagatcctaca 53750230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 2 - 323
Target Start/End: Complemental strand, 51603873 - 51603552
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    ||||||||||||||||||| || |||||||| || | |||||| ||||||||||| |||| || |||||||||||| ||||| ||||| || ||||||||    
T  51603873 tgatgtggccctcttcattacaattatagcacacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctc 51603774  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    |||||| |||||||| ||||||||||| ||||| || |||||||| || || || || |||| ||||||||| ||| |  | |||||| ||||||||||     
T  51603773 atccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcatta 51603674  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    | ||| |||||||| || ||||  |||||||||||||| ||   |||| |||| |||||||| ||||| |||||||||||||| || ||||||||||| |    
T  51603673 agtctctgcttacccttatcagtcggggcactatacggtttaggacgattctgatgtcccttacctcttcgctcactcatcactttataatgagctttgg 51603574  T
Q  302 tatcctcttcataaatcctaca 323  Q
    | ||||| || || ||||||||    
T  51603573 tgtcctcctcgtagatcctaca 51603552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 10 - 362
Target Start/End: Complemental strand, 11204305 - 11203953
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    |||||| ||||||| || ||||| || ||||| ||||||||||| | |||||    ||||||||||||||||||||||||||||||  | |||||  ||     
T  11204305 ccctctccattgcaattgtagcagacaatatccccacgcttgcattaagctagactgtgacccttctgaccacacctgaagcattttctatcatctctac 11204206  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatg 209  Q
     ||||||||| |||||||||||||| |||||||||||  |||||||||| |||| ||||||||||||||||||||| ||| | ||||||||||   | |     
T  11204205 cacaaacattgctcttgtggcctttctcaccacacttataacaaacaatctcagaaggagcatctctcctcttgggtctcctatcatcattcatcttcta 11204106  T
Q  210 cttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctct 309  Q
    ||| || ||||||||||| |||||||| |||||   |||| |||| |||||||| || || | ||||||||| | ||||||||||||||| || || |||    
T  11204105 ctttcctttgtcagcaggagcactataaggcttaggacgattctgctgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttct 11204006  T
Q  310 tcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    |||||||| ||||| ||| ||||||| ||||| |||  ||| |||| ||||||    
T  11204005 tcataaattctacatctgtttaccaactcagagaagactctgatctgctgata 11203953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 17 - 314
Target Start/End: Complemental strand, 3261860 - 3261563
Alignment:
Q  17 cattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaac 116  Q
    |||||||||| || || || || || ||||||||||| ||||||||   ||||||||||||||||||||||||||| ||| | |||||  |   ||||||    
T  3261860 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 3261761  T
Q  117 attactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccg 216  Q
    |||||||||||||||||| |||||||||||| | |||||||| |||  ||||||||||||||||||||||||| | ||||||  ||   | ||||| ||     
T  3261760 attactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcct 3261661  T
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcata 314  Q
    ||||||||||| ||||| || |||||   |||| |||| |||||||| || || | ||||||||| | ||||||||||||||| || || ||||||||    
T  3261660 ttgtcagcaggagcactgtaaggcttaggacgattctgctgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcata 3261563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 37 - 362
Target Start/End: Complemental strand, 44658912 - 44658587
Alignment:
Q  37 atatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggccttttt 136  Q
    ||||| ||||||||||| ||||||||   ||||||||||||||||||||||||||| ||| | |||||  |   |||||||||||||||||||||||| |    
T  44658912 atatccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttct 44658813  T
Q  137 caccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactata 236  Q
    ||||||||||| | |||||||| |||  ||||||||||||||||||||||||| | |||| |  ||   | ||||| || ||||| ||||| ||||| ||    
T  44658812 caccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatgacccatcttctgctttcctttgtccgcaggagcactgta 44658713  T
Q  237 cggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaat 336  Q
     |||||   |||| ||||||||||||| || || | ||||||||| | ||||||||||||||| || || |||||||| || ||||| ||| | |||||     
T  44658712 aggcttaggacgattctgttgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcatagattctacacctgttaaccaac 44658613  T
Q  337 tcagaaaagtttcttatcttctgata 362  Q
    ||||| |||  ||| |||| ||||||    
T  44658612 tcagagaagactctgatctgctgata 44658587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 37 - 344
Target Start/End: Original strand, 13879335 - 13879642
Alignment:
Q  37 atatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggccttttt 136  Q
    |||| |||||||||||| ||||||| |   || |||||||  ||||| | |||||| |||||||| || | | | || ||||||||||||||||| || |    
T  13879335 atatgaccacgcttgcattcagctatcgtatggcccttctttccacatcggaagcacttcttctcctcatcattgcatacattactcttgtggcccttct 13879434  T
Q  137 caccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactata 236  Q
    ||||||||||| |||||||||| ||||||| | ||||||| ||||| || ||| |||||||||||||||| ||||  || |||||| |||| ||||| ||    
T  13879435 caccacacttgtaacaaacaatctcagtagaaacatctcttctcttaggtctcctctcatcattcaatctttgctaccctttgtcatcaggagcactgta 13879534  T
Q  237 cggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaat 336  Q
     ||||||  |||||  || || ||||||   || ||||||||| | ||||| |||||||| ||||||||||| |||||||| |||||||| || ||||||    
T  13879535 gggcttcggacgaccttgctgacccttgttcctccgctcactcctaaccttataatgagccttcgtatcctcctcataaattctacaactactcaccaat 13879634  T
Q  337 tcagaaaa 344  Q
    ||||||||    
T  13879635 tcagaaaa 13879642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 112 - 366
Target Start/End: Original strand, 8708978 - 8709232
Alignment:
Q  112 caaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgct 211  Q
    |||||||||||||||||||| || |||||||||||| | |||||||| |||| |||| ||||| | ||||| || ||| |||||||||||||||| ||||    
T  8708978 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggaacatctattctcttaggtctcctctcatcattcaatctttgct 8709077  T
Q  212 taccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttc 311  Q
    | || ||||||||||| ||||||||  |||||  |||||  || || || |||   || ||||||||||| |||||||||||||||||  ||||||||||    
T  8709078 tccctttgtcagcaggagcactatagagcttcggacgaccttgctgacctttgttcctccgctcactcataaccttgtaatgagctttgatatcctcttc 8709177  T
Q  312 ataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
     || || ||||||||||| ||||||||| |||| |  || |||||||||||||||    
T  8709178 gtagattctacaactgctcaccaattcaaaaaattgcctaatcttctgataacca 8709232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 4 - 362
Target Start/End: Original strand, 27903578 - 27903936
Alignment:
Q  4 atgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcat 103  Q
    |||| |||||| ||||| |||||||| || || ||||| ||||||||||| ||||| ||||  ||||| ||||||||||| ||||| || ||||||||||    
T  27903578 atgttgccctcctcattacagttataacaaacaatatctccacgcttgcattcagccaacacatgacctttctgaccacatctgaaacacttcttctcat 27903677  T
Q  104 ccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaa 203  Q
    | || || || ||||||||||||||||||||  ||||||||||| ||||||||| ||||  |||||||||||||| | | |||| | |||||||||||||    
T  27903678 ctttggtgcagacattactcttgtggcctttcgcaccacacttgtaacaaacaacatcaacaggagcatctctccccctaggccgcctctcatcattcaa 27903777  T
Q  204 tctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgta 303  Q
    ||| || || || |||||||||||  || | || ||||||   |||||    || |||||    ||   ||| ||||||||||| || ||||| || |||    
T  27903778 tctttgttttcctttgtcagcaggaacattgtagggcttcgggcgactactctggcccttattcctcttctcgctcatcaccttatagtgagcctttgta 27903877  T
Q  304 tcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    ||||| ||||||||| |||| || || ||||||||||| || ||||| |||||||||||    
T  27903878 tcctcctcataaatcttacagctactcaccaattcagagaaatttctgatcttctgata 27903936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 17 - 317
Target Start/End: Complemental strand, 29450603 - 29450303
Alignment:
Q  17 cattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaac 116  Q
    |||||||||| || || || || || ||||||||||| ||||||||   |||||||||||||||||||||||| || ||| | |||||      ||||||    
T  29450603 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaaacacttcctatcatctcctccacaaac 29450504  T
Q  117 attactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccg 216  Q
    |||||||||||||||||| |||||||||||| | |||||||| |||  |||||||||||||||||| |||||| | ||||||  ||   | ||||| ||     
T  29450503 attactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttaggcctcctatcatcacccatcttctgctttcct 29450404  T
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 316  Q
    ||||||||||| ||||| || || ||   |||| ||||||||||||| || || | ||||||||| | ||| ||||||||||| || || ||||||||||    
T  29450403 ttgtcagcaggagcactgtaaggtttaggacgattctgttgtcccttacccctcctctcactcataatcttataatgagctttggtgtcttcttcataaa 29450304  T
Q  317 t 317  Q
    |    
T  29450303 t 29450303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 111 - 309
Target Start/End: Original strand, 14697401 - 14697599
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgc 210  Q
    |||| |||||||||| |||||||| ||||||||  |  | |||||||| |||| || ||||||| || |  | |||||| |||||||||||||||| |||    
T  14697401 acaagcattactcttatggcctttctcaccacaagtatagcaaacaatctcagcagtagcatctttctttctaggcctcctctcatcattcaatctttgc 14697500  T
Q  211 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctct 309  Q
    ||||| || |||||||| ||||| || |||||   |||||| || || ||||||||| | | |||| |||  || |||||||||||||| |||||||||    
T  14697501 ttacccttatcagcaggagcactgtaaggctttggacgactttgctgacccttgcctttcctctcattcacaactttgtaatgagctttggtatcctct 14697599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 320
Target Start/End: Complemental strand, 14300585 - 14300485
Alignment:
Q  220 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 319  Q
    |||||||||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| ||||||||||||||||| ||||    
T  14300585 tcagcaggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcc 14300486  T
Q  320 t 320  Q
    |    
T  14300485 t 14300485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 242
Target Start/End: Original strand, 13513585 - 13513781
Alignment:
Q  46 cgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacact 145  Q
    ||||||||||||||||  |  ||||||||||  ||||||| ||  ||||||||    || | || ||||||||| |||||||||||||| || ||||| |    
T  13513585 cgcttgcaatcagctataatatgacccttcttgccacaccggacacatttcttgatctcttcaggacaaacattgctcttgtggcctttctcgccacagt 13513684  T
Q  146 tgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggctt 242  Q
    ||||||| ||||| || | |||||||||  || |||| |||| | | ||||||  || ||| ||||| || || ||| ||||||||||||| |||||    
T  13513685 tgaaacagacaatctctgcaggagcatccttcttcttaggccgcctatcatcaaccattctctgcttgcccttatcaacaggggcactataaggctt 13513781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 345
Target Start/End: Original strand, 8336 - 8570
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgc 210  Q
    |||| ||||||||||||||||||| ||||||||  |  | || ||||| |||  |||||||||| || |  | || | | ||||||||  || ||| ||     
T  8336 acaagcattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatctttctttatagggcgcctctcatcaaccattctctgt 8435  T
Q  211 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 310  Q
    ||||| || |||||||| ||||| || |||||   ||||||||| || || ||| || | |||||| |||  | |||||||||||  || |||||||| |    
T  8436 ttacccttatcagcaggagcactgtaaggcttaggacgactctgctgacctttggcttttcgctcattcacaatcttgtaatgagtcttggtatcctcct 8535  T
Q  311 cataaatcctacaactgcttaccaattcagaaaag 345  Q
    ||||||| || |||||||| ||||| |||||||||    
T  8536 cataaattctgcaactgctcaccaactcagaaaag 8570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 18224185 - 18224123
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatc 173  Q
    ||||||||||| |||||||||||| || ||||| |||||||||||||| || | |||||||||    
T  18224185 acaaacattacacttgtggcctttctcgccacagttgaaacaaacaatctccgcaggagcatc 18224123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 340
Target Start/End: Complemental strand, 18604531 - 18604302
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgc 210  Q
    |||||||||||||||||||||||| || ||||| || ||||||| ||| || | |||||||||  || |||| |||| | | |||||   || ||| |||    
T  18604531 acaaacattactcttgtggcctttctcgccacagttaaaacaaataatctccgaaggagcatccttcttcttaggccgcctatcatcgaccattctctgc 18604432  T
Q  211 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtccctt-gcctctacgctcactcatcaccttgtaatgagctttcgtatcctct 309  Q
    || || || |||||||||||| |||| |||||    |||||||| || ||||| | || | | |||| | |  ||||||||||||||| | |||||||||    
T  18604431 ttgcccttatcagcaggggcattataaggcttagggcgactctgctggcccttagtct-tcctctcattaacaaccttgtaatgagctatggtatcctct 18604333  T
Q  310 tcataaatcctacaactgcttaccaattcag 340  Q
    ||||| |||||||| ||| | ||||| ||||    
T  18604332 tcatagatcctacagctgttcaccaaatcag 18604302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 326
Target Start/End: Original strand, 19635542 - 19635648
Alignment:
Q  220 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 319  Q
    ||||| |||||||| ||||||||   || |||||| |||||||||||  | | |||| |||  |||||||| ||||| ||||||||||||||||| ||||    
T  19635542 tcagcgggggcactgtacggcttaggacaactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcc 19635641  T
Q  320 tacaact 326  Q
    | |||||    
T  19635642 tgcaact 19635648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 366
Target Start/End: Original strand, 14162942 - 14163025
Alignment:
Q  283 accttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    |||||||| ||||| || ||||||| |||||||||||| |||||||| ||||  || ||||| ||||  |||||||| ||||||    
T  14162942 accttgtagtgagccttagtatccttttcataaatcctgcaactgctcaccagctctgaaaaatttcggatcttctggtaacca 14163025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 16248388 - 16248326
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatc 173  Q
    |||||||||||||||||||||||| |||||| | ||||||||   ||| ||||| ||||||||    
T  16248388 acaaacattactcttgtggcctttctcaccataattgaaacatgtaatctcagttggagcatc 16248326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 345
Target Start/End: Complemental strand, 15743 - 15514
Alignment:
Q  116 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttacc 215  Q
    ||||||||||||||||||| ||||||||  |  | || ||||| |||  |||||||||| || |  | || | | ||||||||  || ||| || |||||    
T  15743 cattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatctttctttctagggcgcctctcatcaaccattctctgtttacc 15644  T
Q  216 gttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataa 315  Q
     || |||||||| ||||| || | |||   ||||||||| || || ||| || | |||||| |||  | |||||||||||  || |||||||| ||||||    
T  15643 cttatcagcaggagcactgtaagtcttaggacgactctgctgacctttgacttttcgctcattcacaatcttgtaatgagtcttggtatcctcctcataa 15544  T
Q  316 atcctacaactgcttaccaattcagaaaag 345  Q
    || || |||||||| ||||| |||||||||    
T  15543 attctgcaactgctcaccaactcagaaaag 15514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 225; Significance: 1e-124; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 2 - 366
Target Start/End: Original strand, 23274415 - 23274779
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    |||| |||||||| ||||||||||||||||| ||||| || || ||||| |||||||||||   ||| |||||||| |||||||||||||| ||||||||    
T  23274415 tgatatggccctcctcattgcagttatagcaaactatgtctccccgcttacaatcagctaatgtgtgtcccttctgtccacacctgaagcacttcttctc 23274514  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    ||| ||||||||||||||||||||||||||||| ||||||||||||   |||||||| |||||||||||||||||||||||||||||| ||||||||||     
T  23274515 atctttagtacaaacattactcttgtggcctttctcaccacacttgttgcaaacaatttcagtaggagcatctctcctcttgggcctcctctcatcattt 23274614  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    || || |||||||| ||||||||||| ||||||||| |||||  ||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||    
T  23274615 aacctctgcttacccttgtcagcaggagcactatactgcttcggacgactctgttgtcccttgcccctacgttcactcatcaccttgtaatgagccttcg 23274714  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    ||||||||||||| |||||||| ||||||||||| ||||||||||||||||| ||||||||||||    
T  23274715 tatcctcttcatagatcctacagctgcttaccaactcagaaaagtttcttattttctgataacca 23274779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 2 - 362
Target Start/End: Complemental strand, 19716638 - 19716278
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    |||| ||||||||||  ||||||||||| || || | ||||| |||||||||||||||||    ||| || ||||||||||||||||| || ||||||||    
T  19716638 tgatatggccctctttgttgcagttataacaaacaacatcactacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctc 19716539  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    ||| ||||||||||||||||||||||||||||| || ||||||||| ||||||| || |||| ||||||||||||||| ||||||||| |||||||||||    
T  19716538 atctttagtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaggagcatctctcctattgggcctcctctcatcattc 19716439  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    ||||| ||||| || |||||| || ||||||| || || ||   ||||||||| |||||||| ||||| ||||||||||||||||| ||||||||||| |    
T  19716438 aatctctgctttcccttgtcaacaagggcactgtatggtttaggacgactctgctgtcccttacctcttcgctcactcatcaccttataatgagctttag 19716339  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    | || || ||||| ||||| || ||||||||||| ||||| || ||||| |||||||||||    
T  19716338 tgtcttcctcatatatcctgcagctgcttaccaactcagagaaatttctaatcttctgata 19716278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 2 - 362
Target Start/End: Complemental strand, 19721201 - 19720841
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    |||| ||||||||||  ||||||||||| || || | ||||| |||||||||||||||||    ||| || ||||||||||||||||| || ||||||||    
T  19721201 tgatatggccctctttgttgcagttataacaaacaacatcactacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctc 19721102  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    ||| ||||||||||||||||||||||||||||| || ||||||||| ||||||| || |||| ||||||||||||||| ||||||||| |||||||||||    
T  19721101 atctttagtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaggagcatctctcctattgggcctcctctcatcattc 19721002  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    ||||| ||||| || |||||| || ||||||| || || ||   ||||||||| |||||||| ||||| ||||||||||||||||| ||||||||||| |    
T  19721001 aatctctgctttcccttgtcaacaagggcactgtatggtttaggacgactctgctgtcccttacctcttcgctcactcatcaccttataatgagctttag 19720902  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    | || || ||||| ||||| || ||||||||||| ||||| || ||||| |||||||||||    
T  19720901 tgtcttcctcatatatcctgcagctgcttaccaactcagagaaatttctaatcttctgata 19720841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 2 - 344
Target Start/End: Original strand, 12577175 - 12577517
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    ||||||| ||||||||||| || ||||||||||| | |||||| ||||||||||| |||| || |||||||||||| ||||| ||||| || ||||||||    
T  12577175 tgatgtgaccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctc 12577274  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    |||||| |||||||| ||||||||||| ||||| || |||||||| || || || || |||| ||||||||| ||| |  | |||||| ||||||||||     
T  12577275 atccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcatta 12577374  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    | ||| |||||||| |||||||| |||||||||||||| ||   |||| |||| |||||||| ||||| |||||||||||||| || ||||||||||| |    
T  12577375 agtctctgcttacccttgtcagccggggcactatacggtttaggacgattctgatgtcccttacctcttcgctcactcatcactttataatgagctttgg 12577474  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcagaaaa 344  Q
    | ||||| || || |||||||| |  || ||||| ||||||||    
T  12577475 tgtcctcctcgtagatcctacagcgactcaccaaatcagaaaa 12577517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 73 - 362
Target Start/End: Complemental strand, 23097568 - 23097279
Alignment:
Q  73 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcat 172  Q
    |||||||||||| ||||||| ||||||| ||| || |||||||||||||| ||||||||||| || |||||||| || ||||| || |||| ||||||||    
T  23097568 ttctgaccacacttgaagcacttcttctgatctttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatctcagcaggagcat 23097469  T
Q  173 ctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacg 272  Q
    ||||||||||||||||| |||||||||||| ||  ||||| || ||||||||||||||||| ||||||||     ||||||| ||| | || ||||| ||    
T  23097468 ctctcctcttgggcctcctctcatcattcagtcgttgctttcccttgtcagcaggggcactgtacggcttagggagactctgatgtgctttacctctccg 23097369  T
Q  273 ctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    ||||||||||||||||||||||||||| | ||| || || || || || || || ||||| || ||||||||  |||| |||||||||||    
T  23097368 ctcactcatcaccttgtaatgagcttttgaatcttcctcgtagattctgcagctacttacaaactcagaaaaagttctgatcttctgata 23097279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 37 - 362
Target Start/End: Original strand, 28350732 - 28351057
Alignment:
Q  37 atatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggccttttt 136  Q
    ||||||||||||||||| ||||||| |   || || ||||  ||||| | |||||| || ||||||||   | | ||||||||||||||||||||||| |    
T  28350732 atatcaccacgcttgcattcagctatcgtatgccctttcttcccacatcggaagcactttttctcatcaccattgcaaacattactcttgtggcctttct 28350831  T
Q  137 caccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactata 236  Q
    ||||||||||| | |||||||| |||| |||| ||||||||||||| || ||| |||||||||||||||| ||||  || |||||| |||| ||||||||    
T  28350832 caccacacttgtagcaaacaatctcagcaggaacatctctcctcttaggtctcctctcatcattcaatctttgctcccctttgtcaacaggagcactata 28350931  T
Q  237 cggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaat 336  Q
     ||||||  |||||  || || ||||||   || |||||| |  | ||||| || |||||| |||||||| |||||||||||||||| ||||||||||||    
T  28350932 gggcttcggacgaccttgctgacccttgttcctccgctcattactaaccttatagtgagctatcgtatccacttcataaatcctacagctgcttaccaat 28351031  T
Q  337 tcagaaaagtttcttatcttctgata 362  Q
    |||||||| | ||| |||||||||||    
T  28351032 tcagaaaattgtctgatcttctgata 28351057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 37 - 366
Target Start/End: Original strand, 21901394 - 21901723
Alignment:
Q  37 atatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggccttttt 136  Q
    ||||||||||||||||| ||||||| |   || || ||||  ||||| | |||||| || ||||||||   | | |||||||||||||||||||| || |    
T  21901394 atatcaccacgcttgcattcagctatcgtatgccctttcttcccacatcggaagcactttttctcatcaccattgcaaacattactcttgtggcccttct 21901493  T
Q  137 caccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactata 236  Q
    ||||||||||| | |||||||| ||||||||| ||||||| ||||| || ||| |||||||||||||||| || || || ||||||||||| ||||| ||    
T  21901494 caccacacttgtagcaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctctgtttccctttgtcagcaggagcactgta 21901593  T
Q  237 cggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaat 336  Q
     ||||||  | |||  || || || |||   ||   ||||||||| ||||| ||||||| |||||||||||| |||||||| ||||| ||||| ||||||    
T  21901594 gggcttcggatgaccttgatggcctttgttcctcttctcactcataaccttataatgagatttcgtatcctcctcataaattctacagctgctcaccaat 21901693  T
Q  337 tcagaaaagtttcttatcttctgataacca 366  Q
    |||||||| | ||| ||||| || ||||||    
T  21901694 tcagaaaattgtctgatcttttggtaacca 21901723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 17 - 355
Target Start/End: Original strand, 20848426 - 20848761
Alignment:
Q  17 cattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaac 116  Q
    |||||||||| || || || || || ||||||||||| ||||||||   ||||||||||||||||||||||||||| ||| | |||||  |   ||||||    
T  20848426 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 20848525  T
Q  117 attactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccg 216  Q
    |||||||||||||||||| |||||||||||| | | |||||| |||  ||||||||||||||||||||   || | ||||||  ||   | ||||| ||     
T  20848526 attactcttgtggcctttctcaccacacttgtagc-aacaatctcaacaggagcatctctcctcttgg--atcctatcatcacccatcttctgctttcct 20848622  T
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 316  Q
    ||||||||||| ||||| || |||||   |||| ||||||||||||| || || | ||||||||| | ||| ||||||||||| || || ||||||||||    
T  20848623 ttgtcagcaggagcactgtaaggcttaggacgattctgttgtcccttacccctcctctcactcataatcttataatgagctttggtgtcttcttcataaa 20848722  T
Q  317 tcctacaactgcttaccaattcagaaaagtttcttatct 355  Q
    | || || ||| | ||||| ||||||||| |||| ||||    
T  20848723 ttctgcacctgttaaccaactcagaaaagattctgatct 20848761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 173
Target Start/End: Complemental strand, 11351330 - 11351161
Alignment:
Q  4 atgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcat 103  Q
    ||||| |||||||| ||||| ||  |||| || ||||||| | ||||||||||||||||    ||||||||||  ||||||| ||| |||||||   | |    
T  11351330 atgtgaccctcttccttgcaattgaagcacacaatatcactatgcttgcaatcagctaatgtatgacccttcttgccacaccagaaacatttctctacct 11351231  T
Q  104 ccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatc 173  Q
    |||| | ||||||||| |||||||||||||| |||||||| |||||||| ||||| || | |||||||||    
T  11351230 cctttggacaaacattgctcttgtggcctttctcaccacaattgaaacagacaatctccgcaggagcatc 11351161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 37 - 153
Target Start/End: Complemental strand, 24657244 - 24657128
Alignment:
Q  37 atatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggccttttt 136  Q
    ||||||||| | ||||||||||||||   |||||||||||  ||||||| ||| || |||||| | |||| || ||||||| |||||||||||||||| |    
T  24657244 atatcaccatgtttgcaatcagctaatgtgtgacccttcttgccacaccggaaacacttcttcacctcctcaggacaaacagtactcttgtggcctttct 24657145  T
Q  137 caccacacttgaaacaa 153  Q
    ||||||| |||||||||    
T  24657144 caccacaattgaaacaa 24657128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 173
Target Start/End: Complemental strand, 24705101 - 24704932
Alignment:
Q  4 atgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcat 103  Q
    ||||| ||||||||||| || ||  |||| || || |||  ||||||||||||||||||   |||||||||||  ||||||  ||| ||||||||  | |    
T  24705101 atgtgaccctcttcattacaattgaagcacacaatgtcattacgcttgcaatcagctaaagtgtgacccttcttgccacactggaaacatttctttacct 24705002  T
Q  104 ccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatc 173  Q
    ||| || ||||||||| |||||||||||||| |||||||| |||||||| | ||| |||| |||| ||||    
T  24705001 cctcaggacaaacattgctcttgtggcctttctcaccacaattgaaacagataatctcagcaggaacatc 24704932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 22463094 - 22462931
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    |||||||| ||||| ||  |||| || ||||||  |||||||||||||||||  |  ||||||||||  ||||||  ||  ||||||||    || | ||    
T  22463094 ccctcttcgttgcaattgaagcacacaatatcattacgcttgcaatcagctacgatatgacccttcttgccacactggacacatttcttgatctcttcag 22462995  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatc 173  Q
     |||||||||||||||||||||||| |||||||| |||||||||||||| || | |||||||||    
T  22462994 gacaaacattactcttgtggcctttctcaccacagttgaaacaaacaatctccgcaggagcatc 22462931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 242
Target Start/End: Complemental strand, 24817355 - 24817221
Alignment:
Q  108 agtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatcta 207  Q
    ||||||| |||||||||||||||| || ||||||||  |  | |||||||| ||||||| || |||| || |  | |||||| ||||||||||||||||     
T  24817355 agtacaagcattactcttgtggcccttctcaccacaagtatagcaaacaatctcagtagtagtatctttctttctaggcctcctctcatcattcaatctt 24817256  T
Q  208 tgcttaccgttgtcagcaggggcactatacggctt 242  Q
    || ||||| || |||||||| |||||||| |||||    
T  24817255 tgtttacccttatcagcaggagcactataaggctt 24817221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 242
Target Start/End: Complemental strand, 23116571 - 23116440
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgc 210  Q
    ||||||||||||||||||||||||  | ||||| |||||||||||||| || | |||||||||  || |||| |||| | | |||||   || ||| |||    
T  23116571 acaaacattactcttgtggcctttcccgccacagttgaaacaaacaatctctgaaggagcatccttcttcttaggccgcctatcatcgaccattctctgc 23116472  T
Q  211 ttaccgttgtcagcaggggcactatacggctt 242  Q
    || || || ||||||||||||||||| |||||    
T  23116471 ttgcccttatcagcaggggcactataaggctt 23116440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 23205245 - 23205306
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcat 172  Q
    |||||||||||||||||||||||| || ||||| |||||||||||||| || | ||||||||    
T  23205245 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgaaggagcat 23205306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 23676849 - 23676910
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcat 172  Q
    |||||||||||||||||||||||| || ||||| |||||||||||||| || | ||||||||    
T  23676849 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgaaggagcat 23676910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 220 - 320
Target Start/End: Original strand, 24265407 - 24265507
Alignment:
Q  220 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 319  Q
    |||||||||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| |||||||||||||| || ||||    
T  24265407 tcagcaggggcactgtacggcttaggacgactctgctgtcccttgccctttctctcattcactaccttgtagtgagccttcgtatcctcttcgtagatcc 24265506  T
Q  320 t 320  Q
    |    
T  24265507 t 24265507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 320
Target Start/End: Original strand, 10871887 - 10871987
Alignment:
Q  220 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 319  Q
    |||||||||||||| ||||||||   |||||||||||||||||| ||  | | |||| |||  |||||||| ||||| || ||||||||||| || ||||    
T  10871887 tcagcaggggcactgtacggcttaggacgactctgttgtcccttacccttcctctcattcactaccttgtagtgagccttggtatcctcttcgtagatcc 10871986  T
Q  320 t 320  Q
    |    
T  10871987 t 10871987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 320
Target Start/End: Original strand, 9338616 - 9338719
Alignment:
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 316  Q
    |||||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || |||||||| ||||| |    
T  9338616 ttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttggtatcctcctcataga 9338715  T
Q  317 tcct 320  Q
    ||||    
T  9338716 tcct 9338719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 320
Target Start/End: Original strand, 9487250 - 9487353
Alignment:
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 316  Q
    |||||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || |||||||| ||||| |    
T  9487250 ttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttggtatcctcctcataga 9487349  T
Q  317 tcct 320  Q
    ||||    
T  9487350 tcct 9487353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 334
Target Start/End: Complemental strand, 22742306 - 22742255
Alignment:
Q  283 accttgtaatgagctttcgtatcctcttcataaatcctacaactgcttacca 334  Q
    |||||||||||||| || ||||||||||| |||||||| |||||||| ||||    
T  22742306 accttgtaatgagccttggtatcctcttcgtaaatcctgcaactgctcacca 22742255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 320
Target Start/End: Complemental strand, 44382979 - 44382876
Alignment:
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 316  Q
    |||||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || |||||||| ||||| |    
T  44382979 ttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttggtatcctcctcataga 44382880  T
Q  317 tcct 320  Q
    ||||    
T  44382879 tcct 44382876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 362
Target Start/End: Complemental strand, 24817179 - 24817101
Alignment:
Q  284 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    |||||||||||||||| ||||| || ||||| || || |||||||| |||| |||||||||||  |  |||||||||||    
T  24817179 ccttgtaatgagctttagtatcttcctcatagattctgcaactgctcaccagttcagaaaagtaacggatcttctgata 24817101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 202
Target Start/End: Original strand, 19647827 - 19647911
Alignment:
Q  118 ttactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattca 202  Q
    ||||||||||| ||||| || |||||   ||||||||||| ||| ||||||| |||| || |  |||||||| ||||||||||||    
T  19647827 ttactcttgtgacctttctctccacatcggaaacaaacaacatcggtaggagtatctttctttatgggcctcctctcatcattca 19647911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 13 - 366
Target Start/End: Complemental strand, 12798558 - 12798208
Alignment:
Q  13 tcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagt-a 111  Q
    |||||||| ||||| ||||| || | ||| |||||||  |||||||||||   ||| || |||||||||||||||||||| ||||||||||| |  || |    
T  12798558 tcttcattacagttgtagcaaacaacatccccacgctcacaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatc-tcggtca 12798460  T
Q  112 caaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgct 211  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||| ||||    
T  12798459 caaacattactcttgtggcctttt---ccacacttgaaacaaacaatatcagtatgagcatctctcctcttgagcctcctctcatcattcaatctctgct 12798363  T
Q  212 taccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttc 311  Q
    |||| ||||||||||| |||||||||||||||  ||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  12798362 tacccttgtcagcaggagcactatacggcttcggacgactctgctgtcccttgcctctgcgctcactcatcaccttgtaaagagctttcgtatcctcttc 12798263  T
Q  312 ataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  12798262 ataaatcctacagctgcttaccaactcagaaaagtttcttatcttctgataacca 12798208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 13 - 366
Target Start/End: Original strand, 19150203 - 19150556
Alignment:
Q  13 tcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtac 112  Q
    |||||||| ||||| ||||| || ||||| ||||||||||||||||| ||   ||| || |||||||||||||| ||||| ||||||| |||   |  ||    
T  19150203 tcttcattacagttgtagcaaacaatatctccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctgatctcgatcac 19150302  T
Q  113 aaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgctt 212  Q
    | |||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||| || |||||    
T  19150303 acacattactgttgtggcctttctcaccacacttgaagcaaacaatatcagtaggagcatctctcctcttaggcctcctctcatcattcaacctctgctt 19150402  T
Q  213 accgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttca 312  Q
    ||| |||||||||||||||||| ||||||||  ||||||||| |||||||| ||| | ||||||||||||||||||||||||||||| ||||||||||||    
T  19150403 acccttgtcagcaggggcactaaacggcttcggacgactctgctgtcccttacctatgcgctcactcatcaccttgtaatgagctttggtatcctcttca 19150502  T
Q  313 taaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    || ||||| || || || |||||||| ||||||||||||||||| |||||||||    
T  19150503 tatatcctgcagctactcaccaattcggaaaagtttcttatcttttgataacca 19150556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 13 - 366
Target Start/End: Original strand, 20749602 - 20749955
Alignment:
Q  13 tcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtac 112  Q
    |||||||| ||||| ||||| || ||||| ||||||||||||||||| ||   ||| || |||||||||||||| ||||| ||||||| |||   |  ||    
T  20749602 tcttcattacagttgtagcaaacaatatctccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctgatctcgatcac 20749701  T
Q  113 aaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgctt 212  Q
    | |||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||| || |||||    
T  20749702 acacattactgttgtggcctttctcaccacacttgaagcaaacaatatcagtaggagcatctctcctcttaggcctcctctcatcattcaacctctgctt 20749801  T
Q  213 accgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttca 312  Q
    ||| |||||||||||||||||| ||||||||  ||||||||| |||||||| ||| | ||||||||||||||||||||||||||||| ||||||||||||    
T  20749802 acccttgtcagcaggggcactaaacggcttcggacgactctgctgtcccttacctatgcgctcactcatcaccttgtaatgagctttggtatcctcttca 20749901  T
Q  313 taaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    || ||||| || || || |||||||| ||||||||||||||||| |||||||||    
T  20749902 tatatcctgcagctactcaccaattcggaaaagtttcttatcttttgataacca 20749955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 10 - 341
Target Start/End: Complemental strand, 14283434 - 14283103
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    |||||||| ||||||||||| ||||| | ||||||||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||||||| |    
T  14283434 ccctcttcgttgcagttataacatacaacatcaccacgcttgcaatcagctaatgtgtgacccttctgaccacacctgaagcacttcttctcatccttgg 14283335  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatg 209  Q
    ||||||||||||||||||||||||| || ||||||||| |||||||||  |||| |||||||||||||||   ||||||| |||||||||| | ||| ||    
T  14283334 tacaaacattactcttgtggcctttctcgccacacttgtaacaaacaacctcagcaggagcatctctcctaacgggcctcctctcatcattgagtctctg 14283235  T
Q  210 cttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctct 309  Q
    |||||| || ||||||||||||||||||||||||   |||||||| ||||||||    || | ||||||||||||||||||||||||||| || |||||     
T  14283234 cttacccttatcagcaggggcactatacggcttcgggcgactctgctgtcccttattccttctctcactcatcaccttgtaatgagctttagtgtcctcc 14283135  T
Q  310 tcataaatcctacaactgcttaccaattcaga 341  Q
    ||||| ||||| ||||  |||||||| |||||    
T  14283134 tcatagatcctgcaacgacttaccaaatcaga 14283103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 16 - 308
Target Start/End: Complemental strand, 15099657 - 15099365
Alignment:
Q  16 tcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaa 115  Q
    |||||||||||||| || || || || |||||||| |||||| |||    ||| ||||||||||||||||||||||| |||||||||||  ||  |||||    
T  15099657 tcattgcagttataacaaacgatgtccccacgcttacaatcatctagagtgtgtcccttctgaccacacctgaagcacttcttctcatctctatcacaaa 15099558  T
Q  116 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttacc 215  Q
    | ||||||||||||||||| |||||||||||||| ||||| || |||||||||||||||||||||||||||||| || ||||||| || || ||||||||    
T  15099557 cgttactcttgtggcctttctcaccacacttgaagcaaactatgtcagtaggagcatctctcctcttgggcctcctcccatcatttaacctctgcttacc 15099458  T
Q  216 gttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctc 308  Q
     ||||||||||| |||||||||||| ||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15099457 cttgtcagcaggagcactatacggcgtcggacgactctgctgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtgtcctc 15099365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 39 - 325
Target Start/End: Original strand, 14144879 - 14145165
Alignment:
Q  39 atcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttca 138  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||| ||||| |||||||| ||||||||||||||||| ||     
T  14144879 atcaccacgcttgcaatcagctaacacgtgacccttttgaccacacctgaagcacttcttctcctccttggtacaaacgttactcttgtggcctttctcg 14144978  T
Q  139 ccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacg 238  Q
    ||| |||| |||||||| || |||| ||||||||||||||| |  |||||| |||||||||| | ||| |||||||| ||||||||||||||||| ||||    
T  14144979 ccatacttaaaacaaactatctcagcaggagcatctctcctatatggcctcctctcatcattaagtctctgcttacccttgtcagcaggggcactgtacg 14145078  T
Q  239 gcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaac 325  Q
    ||||   ||||||||| |||||||| ||||| ||||||||||||||||| ||||||||||| ||  |||| ||||| ||||| ||||    
T  14145079 gcttaggacgactctgctgtcccttacctcttcgctcactcatcaccttataatgagctttggtgccctcctcatagatcctgcaac 14145165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 16 - 362
Target Start/End: Complemental strand, 14261300 - 14260954
Alignment:
Q  16 tcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaa 115  Q
    ||||| ||||| ||||| || ||||| ||||||||||||||||| ||   ||| || ||||||| |||||| ||| | |||||||||||   |  ||  |    
T  14261300 tcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtcctttctgactacacctaaagtacttcttctcatctcgatgacgca 14261201  T
Q  116 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttacc 215  Q
    ||||||||||||||||||| |||||||||||||| |||| ||| ||||||||||||| ||||| ||| |||||| |||||||||||| ||| | ||||||    
T  14261200 cattactcttgtggcctttctcaccacacttgaagcaaataatctcagtaggagcatatctccccttaggcctcctctcatcattcagtctctacttacc 14261101  T
Q  216 gttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataa 315  Q
     |||||||||||||||||||||||||||  ||||||||  |||||||| ||| | |||||||| |||||||||||||||||||||||||||||||||||     
T  14261100 cttgtcagcaggggcactatacggcttcggacgactctactgtcccttacctttgcgctcactgatcaccttgtaatgagctttcgtatcctcttcatat 14261001  T
Q  316 atcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    ||||| || || || ||||| ||||| || || |||||||| |||||    
T  14261000 atcctgcagctactcaccaactcagagaaattccttatcttttgata 14260954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 73 - 362
Target Start/End: Complemental strand, 11385426 - 11385137
Alignment:
Q  73 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcat 172  Q
    |||||||||||||||||||| ||||||||||| || |||||||||||||| ||||||||||| || ||||||||  | ||||| || |||| ||||||||    
T  11385426 ttctgaccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttatagcaaactatctcagcaggagcat 11385327  T
Q  173 ctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacg 272  Q
    ||||||||||||||||  |||||||||||| ||  ||||| || ||||||||||||||||| ||||||||   | |||||||||||||||| || || ||    
T  11385326 ctctcctcttgggccttctctcatcattcagtcgttgctttcccttgtcagcaggggcactgtacggcttaggatgactctgttgtcccttacccctccg 11385227  T
Q  273 ctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    ||||||||||| ||||||||||||||| | ||| || ||||| || || || ||||||||||| ||||||||  |||| |||||||||||    
T  11385226 ctcactcatcatcttgtaatgagcttttgaatcttcctcatagattctgcagctgcttaccaactcagaaaaagttctgatcttctgata 11385137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 2 - 362
Target Start/End: Original strand, 13676632 - 13676986
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    |||| |||||||| ||||||||||||||||| ||||| || || ||||| |||||||||||   ||| |||||||| |||||||||||| | ||||||||    
T  13676632 tgatatggccctcctcattgcagttatagcaaactatgtctccccgcttacaatcagctaatgtgtgtcccttctgtccacacctgaagtacttcttctc 13676731  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    ||| |||  |||||||||||||||||||||||| | |||||||||| | |||||||| |||  ||||||||||||||||||||||||| |||||||||||    
T  13676732 atctttatcacaaacattactcttgtggcctttcttaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctctcatcattc 13676831  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    || || || || || ||||||||||| ||||||||||| ||   | ||||||| ||||  || |||||      || ||||||||||||||||||||| |    
T  13676832 aacctctgttttcctttgtcagcaggagcactatacggtttaggatgactctgctgtcatttacctct------acacatcaccttgtaatgagctttag 13676925  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    |||| |||||||| ||||| || || || ||||| ||||| ||  ||||||||||||||||    
T  13676926 tatcttcttcatatatcctgcagctactcaccaaatcagagaaaattcttatcttctgata 13676986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 10 - 362
Target Start/End: Complemental strand, 16947532 - 16947180
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    |||||||| |||||||| ||||| || || || |||||||| || |||||||    ||| || |||||||||||||| |  || ||| |||||||  ||     
T  16947532 ccctcttcgttgcagttgtagcaaacaatgtctccacgcttacattcagctagtgtgtgtcctttctgaccacacctaacacacttcctctcatctctac 16947433  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatg 209  Q
     |||| |||||||||||||||||||||||||||||||| |||||||||| |||   |||||||||||||||||||||||  |||||||||||| ||| ||    
T  16947432 cacaagcattactcttgtggcctttttcaccacacttgtaacaaacaatttcaactggagcatctctcctcttgggccttctctcatcattcattctctg 16947333  T
Q  210 cttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctct 309  Q
    ||| || ||||||||||||||||| || || ||   ||||||||| |||||||| || || | |||||||||||||||||||||||||||||||||||||    
T  16947332 ctttcccttgtcagcaggggcactgtatggtttaggacgactctgctgtcccttaccccttctctcactcatcaccttgtaatgagctttcgtatcctct 16947233  T
Q  310 tcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    ||||| || || || || || ||||||||||| ||  |||| |||||||||||    
T  16947232 tcatagattctgcagctactcaccaattcagagaaaattctaatcttctgata 16947180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 17 - 296
Target Start/End: Complemental strand, 12712716 - 12712437
Alignment:
Q  17 cattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaac 116  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||| |||||||||||||| ||||||||||| || ||||||||    
T  12712716 cattgcagttatagcatacaatatcaccacgtttgcaatcagctaacacgtgacccttctgtccacacctgaagcacttcttctcatctttggtacaaac 12712617  T
Q  117 attactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccg 216  Q
    |||||| ||||||||||| || |||||||| || ||||| || |||  |||||  ||||| | |||||| ||  |||||||||||| ||  ||||| ||     
T  12712616 attacttttgtggcctttctcgccacacttaaagcaaactatctcaacaggagtgtctcttcccttgggtcttctctcatcattcagtcgttgctttccc 12712517  T
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagc 296  Q
    ||  ||||||| ||||| ||||||||   ||||||||||||||||||||| || || ||||||||||||||| |||||||    
T  12712516 ttaccagcaggagcactgtacggcttaggacgactctgttgtcccttgcccctccgttcactcatcaccttggaatgagc 12712437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 10 - 362
Target Start/End: Original strand, 21755601 - 21755953
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    |||||| |||||||||| ||||| || ||||| |||||||| || ||||||||   |||||||||||||||||||||||| || ||| ||||||| |||     
T  21755601 ccctctccattgcagttgtagcagacaatatccccacgcttacattcagctaaagtgtgacccttctgaccacacctgaaacacttcctctcatctttac 21755700  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatg 209  Q
     ||||||||| ||||||||||||||||||||||||||| |||||||||| ||||  ||||||||||||||||| |||||| | |||||| |||   | ||    
T  21755701 cacaaacattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagagggagcatctctcctcttaggcctcatgtcatcactcatattctg 21755800  T
Q  210 cttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctct 309  Q
    ||| || ||||||||||| ||||| || |||||   |||| | ||||||||||| || || | ||||||||| | |||||||||||||||  | || |||    
T  21755801 ctttcctttgtcagcaggagcactgtaaggcttaggacgattttgttgtcccttacccctcctctcactcattatcttgtaatgagctttgatgtcttct 21755900  T
Q  310 tcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    |||||||| ||||| ||| | ||||| ||||| |||  ||| |||| ||||||    
T  21755901 tcataaattctacacctgttaaccaactcagagaagactctgatctgctgata 21755953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 13 - 362
Target Start/End: Original strand, 12459820 - 12460169
Alignment:
Q  13 tcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtac 112  Q
    |||||||||||||||||||| || || || |||||||| || |||||||    ||| ||||||||||||||||| || |||||| |||||||  ||  ||    
T  12459820 tcttcattgcagttatagcagacaatgtccccacgcttacattcagctagggtgtgtcccttctgaccacacctaaaacatttcctctcatctctaccac 12459919  T
Q  113 aaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgctt 212  Q
    || |||| ||||||||||||||||||||||||||| |||| ||||| |||| |||| |||||||||||||||||||| | |||||||||| | | |||||    
T  12459920 aagcattgctcttgtggcctttttcaccacacttgtaacagacaatctcagcaggaacatctctcctcttgggcctcctatcatcattcattttctgctt 12460019  T
Q  213 accgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttca 312  Q
     || ||||||||| | ||| | || |||||   ||||||||| |||||||| || || | ||||||||||||||||||||||||||| || || || |||    
T  12460020 tcccttgtcagcaagagcattgtaaggcttaggacgactctgctgtcccttacccctcctctcactcatcaccttgtaatgagcttttgtgtcttcctca 12460119  T
Q  313 taaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    || ||||| || ||||| ||||| ||||| ||   ||| |||||||||||    
T  12460120 tatatcctgcagctgctcaccaactcagagaaaactctaatcttctgata 12460169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 2 - 323
Target Start/End: Complemental strand, 18051021 - 18050700
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    ||||||| ||||||||||| || ||||| ||||| | |||||| ||||||||||| |||| || |||||||||||| ||||| ||||| || ||||||||    
T  18051021 tgatgtgaccctcttcattacaattataacatacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctc 18050922  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    |||||| |||||||| ||||||||||| ||||| || |||||||| || || || || |||| ||||||||| ||| |  | |||||| ||||||||||     
T  18050921 atccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcatta 18050822  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    | ||| |||||||| || ||||  || ||||||||||| ||   |||| |||| |||||||| ||||| ||||||||||||||||| ||||||||||| |    
T  18050821 agtctctgcttacccttatcagtcggagcactatacggtttaggacgattctgatgtcccttacctcttcgctcactcatcaccttataatgagctttgg 18050722  T
Q  302 tatcctcttcataaatcctaca 323  Q
    | ||||| || || ||||||||    
T  18050721 tgtcctcctcgtagatcctaca 18050700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 10 - 362
Target Start/End: Complemental strand, 13965728 - 13965376
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    |||||| ||||||| || ||||| || ||||| ||||||||||| |||||||    ||||||||||||||||||||||||||||||  | ||||| |||     
T  13965728 ccctctccattgcaattgtagcagacaatatccccacgcttgcattcagctagactgtgacccttctgaccacacctgaagcattttctatcatctttac 13965629  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatg 209  Q
     ||||||||||||||||||| |||| |||||||||||| | ||| |||| |||| ||||||||||||||||||||||||| | ||||||  ||   | ||    
T  13965628 cacaaacattactcttgtggtctttctcaccacacttgtagcaatcaatctcagcaggagcatctctcctcttgggcctcctatcatcacccatcttctg 13965529  T
Q  210 cttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctct 309  Q
    ||| || ||||||||||| ||||| || |||||   |||| | ||||||||||| || || | ||||||||| | || |||||||||||| || || |||    
T  13965528 ctttcctttgtcagcaggagcactgtaaggcttaggacgattatgttgtcccttacccctcctctcactcattatctggtaatgagctttggtgtcttct 13965429  T
Q  310 tcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    |||||||||| ||| ||| | ||||| |||||||||  ||| |||| ||||||    
T  13965428 tcataaatccaacacctgttaaccaactcagaaaagactctgatctgctgata 13965376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 43 - 362
Target Start/End: Complemental strand, 26115617 - 26115298
Alignment:
Q  43 ccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccac 142  Q
    ||||||||||| ||||||||   ||||||||||||||||||||||||||| ||| | |||||  |   |||||||||||||||||||||||| |||||||    
T  26115617 ccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccac 26115518  T
Q  143 acttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggctt 242  Q
    ||||| |||||||||| ||||  |||||||||||||||||||||||| | |||||| |||   | ||||| || ||||||||||| ||||| || |||||    
T  26115517 acttgtaacaaacaatctcagccggagcatctctcctcttgggcctcctatcatcactcatcttctgctttcctttgtcagcaggagcactgtaaggctt 26115418  T
Q  243 ctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaa 342  Q
       |||| |||||| |||||| || || | ||||||||| | ||||||||||||||| || || |||||||| || ||||| ||| | ||||| |||||     
T  26115417 aggacgattctgttatcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcatagattctacacctgttaaccaactcagag 26115318  T
Q  343 aagtttcttatcttctgata 362  Q
    |||  ||| |||| ||||||    
T  26115317 aagactctgatctgctgata 26115298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 362
Target Start/End: Original strand, 13024536 - 13024885
Alignment:
Q  13 tcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtac 112  Q
    ||||| |||||||| ||||| || || || |||||||| || |||||||    ||| || |||| |||||||||||| |||||| ||||||   ||  |     
T  13024536 tcttcgttgcagttgtagcagacaatgtctccacgcttacattcagctagggtgtgtcctttctaaccacacctgaaacatttcctctcatatctaccat 13024635  T
Q  113 aaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgctt 212  Q
    || |||| || |||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||| | ||||||||||  || |||||    
T  13024636 aagcattgcttttgtggcctttttcaccacacttgtaacaaacaatttcagcaggagcatctctcctcttgggcctcctatcatcattcatcctctgctt 13024735  T
Q  213 accgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttca 312  Q
     || ||||||||||| ||||| || || ||   |||| |||  |||||||| || || | ||||||||||||||||||||||||||| || || || |||    
T  13024736 ccctttgtcagcaggagcactgtaaggtttaggacgattctactgtcccttacccctcctctcactcatcaccttgtaatgagctttggtgtcttcctca 13024835  T
Q  313 taaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    || ||||| || ||||||||||| ||||| ||   ||| |||||||||||    
T  13024836 tatatcctgcagctgcttaccaactcagagaaaactctaatcttctgata 13024885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 17 - 314
Target Start/End: Complemental strand, 26091851 - 26091554
Alignment:
Q  17 cattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaac 116  Q
    |||||||||| || || || || || ||||||||||| ||||||||   ||||||||||||||||||||||||||| ||| | |||||  |   ||||||    
T  26091851 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 26091752  T
Q  117 attactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccg 216  Q
    |||||||||||||||||| |||||||||||| | |||||||| |||  ||||||||||||||||||||||||| | ||||||  ||   | ||||| ||     
T  26091751 attactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcct 26091652  T
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcata 314  Q
    ||||||||||| ||||| || |||||   |||| |||| |||||||| || || | ||||||||| | ||||||||||||||| || || ||||||||    
T  26091651 ttgtcagcaggagcactgtaaggcttaggacgattctgctgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcata 26091554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 17 - 314
Target Start/End: Complemental strand, 40924870 - 40924573
Alignment:
Q  17 cattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaac 116  Q
    |||||||||| || || || || || ||||||||||| ||||||||   ||||||||||||||||||||||||||| ||| | |||||  |   ||||||    
T  40924870 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 40924771  T
Q  117 attactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccg 216  Q
    |||||||||||||||||| |||||||||||| | |||||||| |||  ||||||||||||||||||||||||| | ||||||  ||   | ||||| ||     
T  40924770 attactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcct 40924671  T
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcata 314  Q
    ||||||||||| ||||| || |||||   |||| ||||||||||||| || || | ||||||||| | ||| ||||||||||| || || ||||||||    
T  40924670 ttgtcagcaggagcactgtaaggcttaggacgattctgttgtcccttacccctcctctcactcataatcttataatgagctttggtgtcttcttcata 40924573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 314
Target Start/End: Original strand, 49155497 - 49155794
Alignment:
Q  17 cattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaac 116  Q
    |||||||||| || || || || || ||||||||||| ||||||||    |||||||||||||||||||||||||| ||| | |||||  |   ||||||    
T  49155497 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactatgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 49155596  T
Q  117 attactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccg 216  Q
    |||||||||||||||||| |||||||||||| | |||||||| |||  ||||||||||||||||||||||||| | || |||  ||  || ||||| ||     
T  49155597 attactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcctcacccatcctctgctttcct 49155696  T
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcata 314  Q
    ||||||||||| ||||| || |||||   |||| ||||||||||||| || || | ||||||||| | ||| ||||||||||| || || ||||||||    
T  49155697 ttgtcagcaggagcactgtaaggcttaggacgattctgttgtcccttacccctcctctcactcataatcttataatgagctttggtgtcttcttcata 49155794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 108 - 343
Target Start/End: Original strand, 15627810 - 15628045
Alignment:
Q  108 agtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatcta 207  Q
    ||||||| | ||||||||||||||||| |||||||| ||| | |||||||  |||| ||||| |||| || |  | |||||||||||||||||||  ||     
T  15627810 agtacaagcgttactcttgtggcctttctcaccacagttgtagcaaacaacttcagcaggagtatctttctttctaggcctcttctcatcattcaccctt 15627909  T
Q  208 tgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcct 307  Q
    || ||||| || |||||||| ||||| || |||||   |||||| ||||| | ||| | | | | |||| |||| |||||||||||||||||||||||||    
T  15627910 tgtttacccttatcagcaggagcactgtaaggctttggacgactttgttgactcttacttttcctctcattcataaccttgtaatgagctttcgtatcct 15628009  T
Q  308 cttcataaatcctacaactgcttaccaattcagaaa 343  Q
    | ||||| ||||  ||||| ||||||||||||||||    
T  15628010 cctcatagatccggcaactacttaccaattcagaaa 15628045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 37 - 242
Target Start/End: Complemental strand, 12203833 - 12203628
Alignment:
Q  37 atatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggccttttt 136  Q
    |||||| |||||||||| ||||||| |   || || ||||  ||||| | |||||| || ||||||||   | |||||||||||||||||||||| || |    
T  12203833 atatcatcacgcttgcattcagctatcgtatgccctttcttcccacatcagaagcactttttctcatcaccattacaaacattactcttgtggcccttct 12203734  T
Q  137 caccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactata 236  Q
    ||||||||||| | ||||||||  ||| |||| ||||||||||||| || ||| |||||||||||||||| || || || ||||||||||| ||||| ||    
T  12203733 caccacacttgtagcaaacaatcacagcaggaacatctctcctcttaggtctcctctcatcattcaatctttgtttccctttgtcagcaggagcactgta 12203634  T
Q  237 cggctt 242  Q
     |||||    
T  12203633 gggctt 12203628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 139 - 366
Target Start/End: Original strand, 13004783 - 13005010
Alignment:
Q  139 ccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacg 238  Q
    |||||||| || ||||| || |||| |||||  ||||| | |||||| ||  |||||||||||| ||  ||||| || ||| |||||||||| || ||||    
T  13004783 ccacacttaaagcaaactatctcagcaggagtgtctcttcccttgggtcttctctcatcattcagtcgttgctttcccttgccagcaggggcgctgtacg 13004882  T
Q  239 gcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattc 338  Q
    ||||   ||||||||||||||||||||| || || ||||||||||||||||||||||| || | ||| |||||||| || || || || |||| ||| ||    
T  13004883 gcttaggacgactctgttgtcccttgcccctccgttcactcatcaccttgtaatgagcctttgaatcttcttcatagattctgcagctacttatcaactc 13004982  T
Q  339 agaaaagtttcttatcttctgataacca 366  Q
    |||||   | || |||||||||||||||    
T  13004983 agaaagaatcctgatcttctgataacca 13005010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 323
Target Start/End: Complemental strand, 17703543 - 17703224
Alignment:
Q  4 atgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcat 103  Q
    ||||| ||||||||||| |||||  |||| || ||||||  |||||||||||||||||  |  |||||||| |  ||||| | ||  ||||||||    |    
T  17703543 atgtgaccctcttcattacagttgaagcacacaatatcattacgcttgcaatcagctacaatatgaccctttttgccacatcggacacatttcttgatct 17703444  T
Q  104 ccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaa 203  Q
    | | || ||||||||||||||||||||||||  | ||||| ||||||||||||||||| | |||||||||  || |||| |||| | | |||||   ||     
T  17703443 cttcaggacaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagcatccttcttctttggccgcctatcatcgaccat 17703344  T
Q  204 tctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgta 303  Q
    ||| || || || || |||| |||||||||||| || ||    |||||||| || ||||||    | |||||| |||  ||||||||||||||| | |||    
T  17703343 tctctgtttgcccttatcagtaggggcactataaggtttagggcgactctgctggcccttggtcttccgctcattcacaaccttgtaatgagctctggta 17703244  T
Q  304 tcctcttcataaatcctaca 323  Q
    ||||||||||| ||||||||    
T  17703243 tcctcttcatagatcctaca 17703224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 340
Target Start/End: Original strand, 11984180 - 11984510
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    |||||||||||| | ||  |||| || ||||||  |||||||||||||||||  |  ||||||||||  ||||||| ||  ||||||||    || | ||    
T  11984180 ccctcttcattgaaattgaagcacacaatatcattacgcttgcaatcagctacaatatgacccttcttgccacaccggacacatttcttgatctcttcag 11984279  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatg 209  Q
    |||||||||| |||||||||||||| |||||||| |||||||||  ||| ||||  ||||||||  || |||| ||||   | |||||   || ||| ||    
T  11984280 tacaaacattgctcttgtggcctttctcaccacaattgaaacaagtaatctcagctggagcatccttcttcttaggccgtctatcatcgaccattctctg 11984379  T
Q  210 cttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctct 309  Q
     || || || ||||||||||||||||| |||||    |||||||| || ||||||    | |||||| |||  |||||||||||||| || ||||| |||    
T  11984380 tttgcccttatcagcaggggcactatagggcttagggcgactctgctggcccttggtcttccgctcattcacaaccttgtaatgagccttggtatcttct 11984479  T
Q  310 tcataaatcctacaactgcttaccaattcag 340  Q
    || || |||||||||||| | ||||| ||||    
T  11984480 tcgtagatcctacaactgttaaccaaatcag 11984510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 323
Target Start/End: Complemental strand, 16726529 - 16726210
Alignment:
Q  4 atgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcat 103  Q
    ||||| ||||||||||| |||||  |||| || ||||||  |||||||||||||||||  |  |||||||| |  ||||| | ||  ||||||||    |    
T  16726529 atgtgaccctcttcattacagttgaagcacacaatatcattacgcttgcaatcagctacaatatgaccctttttgccacatcggacacatttcttgatct 16726430  T
Q  104 ccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaa 203  Q
    | | || ||||||||||||||||||||||||  | ||||| ||||||||||||||||| | |||||||||  || |||| |||| | | |||||   ||     
T  16726429 cttcaggacaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagcatccttcttctttggccgcctatcatcgaccat 16726330  T
Q  204 tctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgta 303  Q
    ||| || || || || |||| ||||||||| || || ||    |||||||| || ||||||    | |||||| |||  ||||||||||||||| | |||    
T  16726329 tctctgtttgcccttatcagtaggggcactttaaggtttagggcgactctgctggcccttggtctttcgctcattcacaaccttgtaatgagctctggta 16726230  T
Q  304 tcctcttcataaatcctaca 323  Q
    ||||||||||| ||||||||    
T  16726229 tcctcttcatagatcctaca 16726210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 320
Target Start/End: Complemental strand, 15157932 - 15157832
Alignment:
Q  220 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 319  Q
    |||||||||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| ||||||||||||||||| ||||    
T  15157932 tcagcaggggcactgtacggcttaggacgactctgctgtcccttgccctttctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcc 15157833  T
Q  320 t 320  Q
    |    
T  15157832 t 15157832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 14140860 - 14140922
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaaca 64  Q
    |||||||||||||||| || || ||||| ||||| | ||||||||||||||||||||||||||    
T  14140860 tgatgtggccctcttcgttacaattataacatacaacatcaccacgcttgcaatcagctaaca 14140922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 344
Target Start/End: Original strand, 14043084 - 14043217
Alignment:
Q  211 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 310  Q
    ||||| || |||||||| |||||||| |||||   || ||||||||| || ||| || | |||||| |||  | |||||||||||| || |||||||| |    
T  14043084 ttacccttatcagcaggagcactataaggctttggacaactctgttgacctttgactttccgctcattcacaatcttgtaatgagccttagtatcctcct 14043183  T
Q  311 cataaatcctacaactgcttaccaattcagaaaa 344  Q
    |||||||||| |||||||| ||||  ||||||||    
T  14043184 cataaatcctgcaactgctcaccagatcagaaaa 14043217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 344
Target Start/End: Original strand, 14353114 - 14353247
Alignment:
Q  211 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 310  Q
    ||||| || |||||||| |||||||| |||||   || ||||||||| || ||| || | |||||| |||  | |||||||||||| || |||||||| |    
T  14353114 ttacccttatcagcaggagcactataaggctttggacaactctgttgacctttgactttccgctcattcacaatcttgtaatgagccttagtatcctcct 14353213  T
Q  311 cataaatcctacaactgcttaccaattcagaaaa 344  Q
    |||||||||| |||||||| ||||  ||||||||    
T  14353214 cataaatcctgcaactgctcaccagatcagaaaa 14353247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 242
Target Start/End: Original strand, 9591588 - 9591784
Alignment:
Q  46 cgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacact 145  Q
    ||||||||||||||||  |  ||||||||||  ||||||| ||  ||||||||    || | || ||||||||| |||||||||||||| || ||||| |    
T  9591588 cgcttgcaatcagctataatatgacccttcttgccacaccggacacatttcttgatctcttcaggacaaacattgctcttgtggcctttctcgccacagt 9591687  T
Q  146 tgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggctt 242  Q
    ||||||| ||||| || | |||||||||  || |||| |||| | | ||||||  || ||| ||||| || || ||| ||||||||||||| |||||    
T  9591688 tgaaacagacaatctctgcaggagcatccttcttcttaggccgcctatcatcaaccattctctgcttgcccttatcaacaggggcactataaggctt 9591784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 220 - 320
Target Start/End: Original strand, 13689436 - 13689536
Alignment:
Q  220 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 319  Q
    |||| ||||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| ||||||||||||||||| ||||    
T  13689436 tcagtaggggcactgtacggcttaggacgactctggtgtcccttgccctttctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcc 13689535  T
Q  320 t 320  Q
    |    
T  13689536 t 13689536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 320
Target Start/End: Complemental strand, 11234088 - 11233988
Alignment:
Q  220 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 319  Q
    ||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| |||||||||||||| || ||||    
T  11234088 tcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctcttcgtagatcc 11233989  T
Q  320 t 320  Q
    |    
T  11233988 t 11233988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 320
Target Start/End: Original strand, 18181138 - 18181238
Alignment:
Q  220 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 319  Q
    ||||| |||||||| ||||||||   | |||||||||||||||| ||  | | |||| |||  |||||||| ||||| ||||||||||||||||| ||||    
T  18181138 tcagcgggggcactgtacggcttaggaagactctgttgtcccttacccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcc 18181237  T
Q  320 t 320  Q
    |    
T  18181238 t 18181238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 366
Target Start/End: Complemental strand, 12203597 - 12203504
Alignment:
Q  273 ctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    ||||||||| ||||| |||||| |||| |||||||| ||||| || ||||| || || || || |||||||| | | | |||||||||||||||    
T  12203597 ctcactcataaccttataatgaactttggtatcctcctcatagattctacagctactcactaactcagaaaattgtttgatcttctgataacca 12203504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 203; Significance: 1e-111; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 16 - 366
Target Start/End: Complemental strand, 16825574 - 16825224
Alignment:
Q  16 tcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaa 115  Q
    |||||| |||| ||||| || || || |||||||| |||||||||||   ||| || || | ||||||||||||||| |||||||||||      |||||    
T  16825574 tcattgaagttgtagcaaacaatgtccccacgcttacaatcagctaaagtgtgtccttttttaccacacctgaagcacttcttctcatcacggtcacaaa 16825475  T
Q  116 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttacc 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||| | ||||||    
T  16825474 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcatcttgggcctcctctcatctttcaatctctacttacc 16825375  T
Q  216 gttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataa 315  Q
     ||||||| |||||||||||||||||||  ||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||     
T  16825374 cttgtcaggaggggcactatacggcttcggacgactcagctgtcccttgcctctgcgctcactcatcaccttgtaatgagctttcgtatcttcttcatag 16825275  T
Q  316 atcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  16825274 atcctacagctgcttaccaactcagaaaagtttcttatcttctgataacca 16825224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 2 - 355
Target Start/End: Complemental strand, 16831837 - 16831484
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    |||| ||||||||||| ||||||||||| ||||| | ||||||||||||||| || ||||||| ||||||||||||||||||||||||||| ||||||||    
T  16831837 tgatatggccctcttcgttgcagttataacatacaacatcaccacgcttgcagtccgctaacacgtgacccttctgaccacacctgaagcacttcttctc 16831738  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    |||||| |||||||||||||||||||||||||| || |||||||| |||||||| || |||| ||||||||||||||| || |||||| ||||||||||     
T  16831737 atccttggtacaaacattactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcctattcggcctcctctcatcatta 16831638  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    | ||| |||||||| || |||||||||||||||||||||||   | ||||||| |||||||| ||||| ||||||||||||||||| ||||||||||| |    
T  16831637 agtctctgcttacccttatcagcaggggcactatacggcttaggatgactctgctgtcccttacctcttcgctcactcatcaccttataatgagctttgg 16831538  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatct 355  Q
    | ||||| ||||| ||||| ||||  |||||||| ||||| ||  |||||||||    
T  16831537 tgtcctcctcatagatcctgcaacgacttaccaaatcagagaaaattcttatct 16831484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 2 - 341
Target Start/End: Complemental strand, 16384681 - 16384342
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    |||| |||||||||||||| || ||||||||||| | ||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||    
T  16384681 tgatatggccctcttcattacaattatagcatacaacatcaccacgcttgcaatcagccaacatgtgacccttctgaccacacctgaagcacttcttctc 16384582  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    |||||| |||||||| |||||||||||| |||| || |||||||| |||||||| || |||| ||||||||||||||| || |||||| ||||||||||     
T  16384581 atccttggtacaaacgttactcttgtggactttctcgccacacttaaaacaaactatctcagcaggagcatctctcctattcggcctcctctcatcatta 16384482  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    | ||| |||||||| ||||||||||||||||| || |||||   |||||||||||||||||| ||||| ||||||||||||||||| |||||||||||      
T  16384481 agtctctgcttacccttgtcagcaggggcactgtatggcttaggacgactctgttgtcccttacctcttcgctcactcatcaccttataatgagctttgc 16384382  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcaga 341  Q
    | ||||| ||||| |||||||| |  |||||||| |||||    
T  16384381 tgtcctcctcatagatcctacagcaacttaccaaatcaga 16384342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 19 - 366
Target Start/End: Original strand, 17494484 - 17494834
Alignment:
Q  19 ttgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacat 118  Q
    |||||||||||||| || || || |||| ||| || |||||||    ||| || |||||||||||||||| ||| |||||||||||  ||  ||||||||    
T  17494484 ttgcagttatagcaaacaatgtctccacacttacagtcagctagtgtgtgtcctttctgaccacacctga-gcacttcttctcatctctatcacaaacat 17494582  T
Q  119 tactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgtt 218  Q
    ||||||||||||||||||||||||| ||||| |||||||| |||||| ||||||||||||||||||||||| |||||||||| || || |||||||| ||    
T  17494583 tactcttgtggcctttttcaccacatttgaagcaaacaatctcagtatgagcatctctcctcttgggcctcctctcatcatttaacctctgcttaccctt 17494682  T
Q  219 ----gtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcata 314  Q
        | ||||||| |||||||| |||||| ||||||| |||||||||||| |||| ||||||||||||||||||||||||||||| |||||||| |||||    
T  17494683 ctcagccagcaggagcactatatggcttcgaacgactttgttgtcccttggctctgcgctcactcatcaccttgtaatgagctttggtatcctcctcata 17494782  T
Q  315 aatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
     || ||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  17494783 gattctacagctgcttaccaactcagaaaagtttcttatcttctgataacca 17494834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 77 - 362
Target Start/End: Original strand, 12181239 - 12181524
Alignment:
Q  77 gaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctct 176  Q
    ||||||| |||||||| |||||||||||  ||  ||| || |||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||    
T  12181239 gaccacaactgaagcacttcttctcatctctatcacagactttactcttgtggcctttttcaccacacttgaagcaaaaaatgtcagtaggagcatctct 12181338  T
Q  177 cctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctca 276  Q
    |||||||| |||| |||||||||| || || | |||||| ||||||||||| |||||||||||||||  |||||||||||||||||||||||| || |||    
T  12181339 cctcttggtcctcctctcatcatttaacctctacttacccttgtcagcaggagcactatacggcttcagacgactctgttgtcccttgcctcttcgttca 12181438  T
Q  277 ctcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||| | ||||||||||||||| ||||| ||||| ||||||||    
T  12181439 ctcatcaccttgtaatgagctttcgtgtcctcctcataaatcctacagccgcttaccaattcagagaagttccttattttctgata 12181524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 10 - 366
Target Start/End: Complemental strand, 14290833 - 14290477
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    ||||||||||  || |||||||| |  | ||| |||||||| |||||||||||   ||| || ||||| |||||||| ||||| |||||||||||   |     
T  14290833 ccctcttcatcacaattatagcaaataacatccccacgcttacaatcagctaaagtgtgtcctttctgtccacacctaaagcacttcttctcatctcaat 14290734  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatg 209  Q
     ||| |||||||||||||||||||| |||||||||||||| |||| ||| ||||||||||||||||||||||| |||||| ||||||||||||  || ||    
T  14290733 cacacacattactcttgtggcctttctcaccacacttgaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagcctctg 14290634  T
Q  210 cttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctct 309  Q
     ||||| ||||||||||| ||||||||||| |||  ||||||||| |||||||| ||||| |||||||||||||| || ||||||||||| |||||||||    
T  14290633 tttacctttgtcagcaggagcactatacggtttcggacgactctgctgtcccttacctctgcgctcactcatcactttataatgagctttggtatcctct 14290534  T
Q  310 tcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    ||||| || |||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  14290533 tcatagattctacaactgctttccaattcagaaaaatttcttatcttttgataacca 14290477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 2 - 362
Target Start/End: Complemental strand, 31692494 - 31692134
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    |||| |||||||| |||||||||||||| || || | |||||||| |||||| |||||||    ||| ||||||| |||||||||||| || ||||||||    
T  31692494 tgatatggccctcctcattgcagttataacaaacaacatcaccactcttgcagtcagctagagtgtgtcccttctaaccacacctgaaacacttcttctc 31692395  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    ||| || |||||||||||||||||||||||||| |||||||||||| ||||||| || |||| || ||||| |||||| ||||||||| |||||||||||    
T  31692394 atctttggtacaaacattactcttgtggcctttctcaccacacttgtaacaaacgatctcagcagaagcatttctcctattgggcctcctctcatcattc 31692295  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    ||  | ||||| || ||||||||||| |||||||||||||||  ||||||||| ||||| ||||  || || |||||||||||||| |||||||||||||    
T  31692294 aacttctgcttccctttgtcagcaggagcactatacggcttcggacgactctgctgtcctttgctccttcgatcactcatcaccttataatgagctttcg 31692195  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    | ||||| ||||| || || || || |||||||||||||| |||||||| |||||||||||    
T  31692194 tgtcctcctcatagattctgcagctacttaccaattcagagaagtttctgatcttctgata 31692134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 2 - 362
Target Start/End: Original strand, 31941723 - 31942083
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    |||| |||||||| |||||||| ||||| || || | ||||||||||||||| |||||||    ||| |||||||||||||||||||| || ||||||||    
T  31941723 tgatatggccctcctcattgcaattataacaaacaacatcaccacgcttgcagtcagctagagtgtgtcccttctgaccacacctgaaacacttcttctc 31941822  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    ||| || |||||||||||||||||||||||||| || ||||||||| ||||||| || |||| |||||||| |||||| ||||||||| |||||||||||    
T  31941823 atctttggtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaggagcatttctcctattgggcctcctctcatcattc 31941922  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    ||  | ||||| || ||||||||||| |||||||||||||||  ||||||||| | ||| ||||  || || |||||||||||||| |||||||||||||    
T  31941923 aacttctgcttccctttgtcagcaggagcactatacggcttcggacgactctgctatcctttgctccttcgatcactcatcaccttataatgagctttcg 31942022  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    | ||||| ||||| || || || || |||||||||||||| |||||||| |||||||||||    
T  31942023 tgtcctcctcatagattctgcagctacttaccaattcagagaagtttctgatcttctgata 31942083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 16 - 366
Target Start/End: Original strand, 35983015 - 35983365
Alignment:
Q  16 tcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagt-acaa 114  Q
    ||||| ||||| ||||| || ||||| ||||||||||||||||| ||   ||| || ||||| ||||| ||||| || ||||||||||| |  || |||     
T  35983015 tcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtcctttctgtccacatctgaaacacttcttctcatc-tcggtcacac 35983113  T
Q  115 acattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttac 214  Q
    |||||||||||||||||||| |||||||||||||| |||| |||  |||||||||||||||||||||| |||||| ||||||||||||  || || ||||    
T  35983114 acattactcttgtggcctttctcaccacacttgaagcaaataatcacagtaggagcatctctcctcttaggcctcctctcatcattcagcctctgtttac 35983213  T
Q  215 cgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcata 314  Q
    | ||||||||||| ||||||||||| |||  || |||||| |||||||| ||||| | |||||||||||| || ||||||||||| ||||||||||||||    
T  35983214 ctttgtcagcaggagcactatacggtttcggacaactctgctgtcccttacctctgcactcactcatcactttataatgagctttggtatcctcttcata 35983313  T
Q  315 aatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
     || |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  35983314 gattctacaactgcttaccaattcagaaaaatttcttatcttatgataacca 35983365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 2 - 359
Target Start/End: Original strand, 17189194 - 17189551
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    ||||||||||||| ||||  || ||||| || || | |||||| | |||||| | ||| |||  ||| || |||||||||||||||||||| ||||||||    
T  17189194 tgatgtggccctcctcatcacaattataacaaacaacatcaccccacttgcagttagccaacgtgtgtcctttctgaccacacctgaagcacttcttctc 17189293  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    ||| || |||||||| ||||| ||||||||||| || |||||||| |||||||||||||||  |||||||||||||||||||| |||| ||||||||||     
T  17189294 atctttggtacaaacgttacttttgtggcctttctcgccacacttaaaacaaacaatatcaacaggagcatctctcctcttggacctcctctcatcatta 17189393  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    ||||| ||||| || |||| |||||| ||||| |||||||||  ||||||||| || ||||||||||| || |||||||||||||||||||||||||| |    
T  17189394 aatctctgctttcccttgttagcaggagcactgtacggcttcggacgactctgctggcccttgcctctgcggtcactcatcaccttgtaatgagcttttg 17189493  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctg 359  Q
    | ||||||||||| || ||||| || |||||||| ||| | |||||||| ||||||||    
T  17189494 tgtcctcttcatagattctacagctacttaccaactcaaagaagtttctgatcttctg 17189551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 2 - 359
Target Start/End: Original strand, 24190124 - 24190480
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    ||||||||||||| ||||  || ||||| || || | |||||| | |||||| | ||| |||  ||| || |||||||||||||||||||| ||||||||    
T  24190124 tgatgtggccctcctcatcacaattataacaaacaacatcaccccacttgcagttagccaacgtgtgtcctttctgaccacacctgaagcacttcttctc 24190223  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    ||| || |||||||| ||||| ||||||||||| || |||||||| |||||||||||||||  |||||||||||||||||||  |||| |||||||||||    
T  24190224 atctttggtacaaacgttacttttgtggcctttctcgccacacttaaaacaaacaatatcaacaggagcatctctcctcttgtacctcctctcatcattc 24190323  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    ||||| ||||| || ||||||||||| ||||| |||||||||  ||||||||| ||  |||||||||| || ||| ||||||||||||||||||||||||    
T  24190324 aatctctgctttcccttgtcagcaggagcactgtacggcttcggacgactctgctg-gccttgcctctgcggtcagtcatcaccttgtaatgagctttcg 24190422  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctg 359  Q
    | ||||||||||| || ||||| || |||||||| ||||| |||||||| ||||||||    
T  24190423 tgtcctcttcatagattctacagctacttaccaaatcagagaagtttctgatcttctg 24190480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 16 - 362
Target Start/End: Complemental strand, 12357822 - 12357476
Alignment:
Q  16 tcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaa 115  Q
    ||||||||||||||||| || |  || || ||||| |||||||||||   ||| || |||||||||||||||||||| ||||||||||| |||  ||| |    
T  12357822 tcattgcagttatagcaaacaacgtctccccgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacaga 12357723  T
Q  116 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttacc 215  Q
    |||||||||||||||||||||| ||||||||| | |||||||| |||| ||||| ||||||||||||||||||| ||||||||||||  || | ||| ||    
T  12357722 cattactcttgtggcctttttcgccacacttgtagcaaacaatctcagcaggagtatctctcctcttgggcctcctctcatcattcagcctctactttcc 12357623  T
Q  216 gttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataa 315  Q
     ||||||||||| |||||||| || ||   ||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| || || ||||||||     
T  12357622 cttgtcagcaggagcactatatggtttaggacgactctgatgtcccttacctctgcgctcactcatcaccttgtaatgagctttagtgtcttcttcatat 12357523  T
Q  316 atcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    ||||| || || || ||||| ||||| ||  ||||||||||||||||    
T  12357522 atcctgcagctactcaccaaatcagagaaaattcttatcttctgata 12357476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 16 - 362
Target Start/End: Complemental strand, 18131642 - 18131296
Alignment:
Q  16 tcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaa 115  Q
    ||||||||||||||||| |||| ||| |||||||| |||| ||||||   ||| || |||||||||||||||||||| ||||||||||| |||  |||||    
T  18131642 tcattgcagttatagcacactacatccccacgcttacaattagctaatgcgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacaaa 18131543  T
Q  116 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttacc 215  Q
    ||||||||||||||||||| || ||||||||| | ||| |||| |||  ||||||||||||||||||||||||| |||||| ||||| ||| || || ||    
T  18131542 cattactcttgtggcctttctcgccacacttgtagcaatcaatctcaacaggagcatctctcctcttgggcctcctctcattattcagtctctgttttcc 18131443  T
Q  216 gttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataa 315  Q
     ||||||||||| |||||||| || ||   ||||||||| ||||| || ||||| || ||||||||||| |||||||||||||| || || ||||||||     
T  18131442 tttgtcagcaggagcactatatggtttaggacgactctgctgtcctttacctctccgttcactcatcactttgtaatgagctttagtgtcttcttcatat 18131343  T
Q  316 atcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    |||||||| || || ||||  ||||| ||  ||||||||||||||||    
T  18131342 atcctacagctactcaccatatcagagaaaattcttatcttctgata 18131296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 2 - 323
Target Start/End: Original strand, 13944844 - 13945165
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    ||||||||||||||||||| || ||||||||||| | |||||| ||||||||||| |||| || |||||||||||| ||||| ||||| || ||||||||    
T  13944844 tgatgtggccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctc 13944943  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    |||||| |||||||| ||||||||||| ||||| || |||||||| || || || || |||| ||||||||| ||| |  | |||||| ||||||||||     
T  13944944 atccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcatta 13945043  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    | ||| |||||||| || ||||  |||||||||||||| ||   |||| |||| |||||||| ||||| ||||||||||||||||| ||||||||||| |    
T  13945044 agtctctgcttacccttatcagtcggggcactatacggtttaggacgattctgatgtcccttacctcttcgctcactcatcaccttataatgagctttgg 13945143  T
Q  302 tatcctcttcataaatcctaca 323  Q
    | ||||| || || ||||||||    
T  13945144 tgtcctcctcgtagatcctaca 13945165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 2 - 323
Target Start/End: Complemental strand, 8744699 - 8744378
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    ||||||||||||||||||| || ||||||||||| | |||||| ||||||||||| |||| || |||||||||||| ||||| ||||| || ||||||||    
T  8744699 tgatgtggccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctc 8744600  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    |||||| |||||||| ||||||||||| ||||| || |||||||| || || || || |||| ||||||||| ||| |  | |||||| ||||||||||     
T  8744599 atccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcatta 8744500  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    | ||| |||||||| || ||||  |||||||||||||| ||   |||| |||| |||||||| ||||| |||||||||||||| || ||||||||||| |    
T  8744499 agtctctgcttacccttatcagtcggggcactatacggtttaggacgattctgatgtcccttacctcttcgctcactcatcactttataatgagctttgg 8744400  T
Q  302 tatcctcttcataaatcctaca 323  Q
    | ||||| || || ||||||||    
T  8744399 tgtcctcctcgtagatcctaca 8744378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 115 - 356
Target Start/End: Complemental strand, 12857692 - 12857451
Alignment:
Q  115 acattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttac 214  Q
    ||||||||| ||||||| |||||||||||||||||||| ||||| |||||||||||||||||||| || |||||| |||||||||||| ||  || ||||    
T  12857692 acattactcatgtggcccttttcaccacacttgaaacagacaatctcagtaggagcatctctccttttaggcctcctctcatcattcagtccttgtttac 12857593  T
Q  215 cgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcata 314  Q
    | ||||||||||| ||||||||||| ||   ||||||||  |||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||    
T  12857592 ctttgtcagcaggagcactatacggttttggacgactctactgtcccttgcctctacgctcactcatcaccttataatgagcttttgtatcctcctcata 12857493  T
Q  315 aatcctacaactgcttaccaattcagaaaagtttcttatctt 356  Q
     || ||||| || || ||||| ||| ||||  ||||||||||    
T  12857492 gattctacagctactcaccaaatcaaaaaaaattcttatctt 12857451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 10 - 362
Target Start/End: Complemental strand, 16327010 - 16326656
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    |||||| |||||||||| ||||| || || || |||||||| || ||||||||   ||| |||||||||||||||||||| |||||| |||||||  ||     
T  16327010 ccctctccattgcagttgtagcagacaatgtccccacgcttacattcagctaaattgtgtcccttctgaccacacctgaaacatttcctctcatctctac 16326911  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaa-tatcagtaggagca-tctctcctcttgggcctcttctcatcattcaatcta 207  Q
     ||||||||| ||||||||||||||||||||||||||  ||||||||| | |||| ||||||| |||||||||||||| ||| | ||||||||||   |     
T  16326910 cacaaacattgctcttgtggcctttttcaccacacttataacaaacaagtctcagcaggagcagtctctcctcttgggtctcctatcatcattcaccttt 16326811  T
Q  208 tgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcct 307  Q
    ||||| || ||||||||||| ||||| |  |||||   ||||||||| ||||||||||| || | ||||||||| | ||||||||||||||| || || |    
T  16326810 tgctttcctttgtcagcaggagcactgtcaggcttaggacgactctgctgtcccttgcccctcctctcactcattatcttgtaatgagctttggtgtctt 16326711  T
Q  308 cttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    ||||||||||||| |||||| ||||||| ||||| |||  ||| |||| ||||||    
T  16326710 cttcataaatcctgcaactgtttaccaactcagagaagactctgatctgctgata 16326656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 17 - 314
Target Start/End: Original strand, 10408803 - 10409100
Alignment:
Q  17 cattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaac 116  Q
    |||||||||| || || || || || ||||||||||| ||||||||   ||||||||||||||||||||||||||| ||| | |||||  |   ||||||    
T  10408803 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 10408902  T
Q  117 attactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccg 216  Q
    |||||||||||||||||| |||||||| ||| |||||||||| ||||  |||||||||||||||||||||||| | ||||||  ||   | || |||||     
T  10408903 attactcttgtggcctttctcaccacatttgtaacaaacaatctcagctggagcatctctcctcttgggcctcctatcatcacccatcttctgtttaccc 10409002  T
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcata 314  Q
    ||||||||||| ||||| || |||||   ||||||||| |||||||| || || | ||||||||| | ||||||||||||||| || || ||||||||    
T  10409003 ttgtcagcaggagcactgtaaggcttaggacgactctggtgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcata 10409100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 17 - 314
Target Start/End: Original strand, 47126779 - 47127076
Alignment:
Q  17 cattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaac 116  Q
    |||||||||| || || || || || ||||||||||| ||||||||   ||||||||||||||||||||||||||| ||| | |||||  |   ||||||    
T  47126779 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 47126878  T
Q  117 attactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccg 216  Q
    |||||||||||||||||| |||||||||||| | |||||||| |||  ||||||||||||||||||||||||| | ||||||  ||  || ||||| ||     
T  47126879 attactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcctctgctttcct 47126978  T
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcata 314  Q
    ||||||||||| ||||| || |||||   |||| ||||||||||||| || || | ||||||||| | ||| ||||||||||| || || ||||||||    
T  47126979 ttgtcagcaggagcactgtaaggcttaggacgattctgttgtcccttacccctcctctcactcataatcttataatgagctttggtgtcttcttcata 47127076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 43 - 314
Target Start/End: Original strand, 28757180 - 28757451
Alignment:
Q  43 ccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccac 142  Q
    ||||||||||| ||||||||   ||||||||||||||||||||||||||| ||| | |||||  |   |||||||||||||||||||||||| |||||||    
T  28757180 ccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccac 28757279  T
Q  143 acttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggctt 242  Q
    ||||| | |||||||| |||  ||||||||||||||||||||||||| | ||||||  ||   | ||||| || ||||||||||| ||||| || |||||    
T  28757280 acttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggctt 28757379  T
Q  243 ctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcata 314  Q
       |||| ||||||||||||| || || | ||||||||| | ||||||||||||||| || || ||||||||    
T  28757380 aggacgattctgttgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcata 28757451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 73 - 362
Target Start/End: Complemental strand, 11958419 - 11958130
Alignment:
Q  73 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcat 172  Q
    ||||||||||||||||| || ||| |||||||  ||  |||| |||| || |||||||||||||||||||||||  |||||||||| |||| ||||||||    
T  11958419 ttctgaccacacctgaaacacttcctctcatctctaccacaagcattgcttttgtggcctttttcaccacacttataacaaacaatttcagcaggagcat 11958320  T
Q  173 ctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacg 272  Q
    ||||||||||  ||||| | |||||||||| ||| || || || ||||||||||| ||||| || || ||   |||| |||| |||||||| ||||| |     
T  11958319 ctctcctcttaagcctcctatcatcattcattctctgtttccctttgtcagcaggagcactgtaaggtttaggacgattctgctgtcccttacctctcct 11958220  T
Q  273 ctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    |||||||||||||||||||||| |||| || || || ||||||||||  || ||||||||||| ||||| ||   ||| |||||||||||    
T  11958219 ctcactcatcaccttgtaatgaacttttgtgtcttcctcataaatcccgcagctgcttaccaactcagagaaaactctaatcttctgata 11958130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 37 - 366
Target Start/End: Original strand, 15230458 - 15230787
Alignment:
Q  37 atatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggccttttt 136  Q
    ||||||||||||||||| ||||||| |   || || ||||  ||||| | ||| || || ||||||||   | |||||||||||||||||||||| ||||    
T  15230458 atatcaccacgcttgcattcagctatcgtatgccctttcttcccacatcagaaacactttttctcatcaccattacaaacattactcttgtggccctttt 15230557  T
Q  137 caccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactata 236  Q
    ||||||||||| | |||||||| |||| |||| ||||| | ||||| |||||| |||||||||| ||||| ||||| || ||||||||||| ||||||||    
T  15230558 caccacacttgtagcaaacaatctcagcaggaacatcttttctcttaggcctcctctcatcatttaatctttgcttccctttgtcagcaggagcactata 15230657  T
Q  237 cggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaat 336  Q
     |||||   |||||  ||||| || |||   ||   ||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || ||  ||||     
T  15230658 gggcttaggacgaccttgttggcctttgttcctcttctcactcataaccttataatgagctttggtatcctcctcatagattctacagctactccccaac 15230757  T
Q  337 tcagaaaagtttcttatcttctgataacca 366  Q
    |||||||| | ||| |||||||||||||||    
T  15230758 tcagaaaattgtctgatcttctgataacca 15230787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 37 - 366
Target Start/End: Original strand, 15236326 - 15236655
Alignment:
Q  37 atatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggccttttt 136  Q
    ||||||||||||||||| ||||||| |   || || ||||  ||||| | ||| || || ||||||||   | |||||||||||||||||||||| ||||    
T  15236326 atatcaccacgcttgcattcagctatcgtatgccctttcttcccacatcagaaacactttttctcatcaccattacaaacattactcttgtggccctttt 15236425  T
Q  137 caccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactata 236  Q
    ||||||||||| | |||||||| |||| |||| ||||| | ||||| |||||| |||||||||| ||||| ||||| || ||||||||||| ||||||||    
T  15236426 caccacacttgtagcaaacaatctcagcaggaacatcttttctcttaggcctcctctcatcatttaatctttgcttccctttgtcagcaggagcactata 15236525  T
Q  237 cggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaat 336  Q
     |||||   |||||  ||||| || |||   ||   ||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || ||  ||||     
T  15236526 gggcttaggacgaccttgttggcctttgttcctcttctcactcataaccttataatgagctttggtatcctcctcatagattctacagctactccccaac 15236625  T
Q  337 tcagaaaagtttcttatcttctgataacca 366  Q
    |||||||| | ||| |||||||||||||||    
T  15236626 tcagaaaattgtctgatcttctgataacca 15236655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 13 - 243
Target Start/End: Complemental strand, 13317867 - 13317637
Alignment:
Q  13 tcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtac 112  Q
    |||||||| |||||||| || || | ||| |||||||||||||| ||||| |  ||||| || |||||||| ||||| || ||||||||||| || || |    
T  13317867 tcttcattacagttataacaaaccacatccccacgcttgcaatccgctaaaacatgacctttttgaccacatctgaaacacttcttctcatctttggtgc 13317768  T
Q  113 aaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgctt 212  Q
    |||||||||| |||||||||||| ||||||||||| ||||||||| ||||  |||||||||||||| | | |||||| |||||||||| ||| | || ||    
T  13317767 aaacattacttttgtggccttttgcaccacacttgtaacaaacaacatcaacaggagcatctctccccctaggcctcctctcatcatttaatatttgttt 13317668  T
Q  213 accgttgtcagcaggggcactatacggcttc 243  Q
     || ||||||||||| ||||| || ||||||    
T  13317667 tcctttgtcagcaggagcactgtagggcttc 13317637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 2 - 129
Target Start/End: Complemental strand, 11949234 - 11949107
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    ||||||| || || ||||||||||||||||| || | ||| || ||||| ||||||||||| | ||| || ||||||||||| |||||||| ||||||||    
T  11949234 tgatgtgaccttcctcattgcagttatagcaaacaacatctccccgcttacaatcagctaatatgtgtcctttctgaccacatctgaagcacttcttctc 11949135  T
Q  102 atccttagtacaaacattactcttgtgg 129  Q
    ||| ||||||||||||||||||||||||    
T  11949134 atctttagtacaaacattactcttgtgg 11949107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 37 - 211
Target Start/End: Complemental strand, 15008855 - 15008684
Alignment:
Q  37 atatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggccttttt 136  Q
    ||||||||||||||||| ||||||| |   || |||||||  ||||| | |||||| |||| |||| | ||    ||||||||||||||||||||| | |    
T  15008855 atatcaccacgcttgcattcagctatcgtatgccccttctttccacatcggaagcacttctcctcaccattg---caaacattactcttgtggcctctct 15008759  T
Q  137 caccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgct 211  Q
    ||||||||||| | |||||||| |||| |||| ||||||||||||| || ||| |||||||||||||||| ||||    
T  15008758 caccacacttgtagcaaacaatctcagcaggaacatctctcctcttaggtctcctctcatcattcaatctttgct 15008684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 271 - 366
Target Start/End: Complemental strand, 2245712 - 2245617
Alignment:
Q  271 cgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    ||||||||||||||||| ||||||||||| ||||| || |||||||||||| | || || ||||| |||||||||||||| |||||||||||||||    
T  2245712 cgctcactcatcaccttataatgagctttggtatcatcctcataaatcctaaagctactcaccaactcagaaaagtttctaatcttctgataacca 2245617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 362
Target Start/End: Complemental strand, 12508758 - 12508514
Alignment:
Q  118 ttactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgt 217  Q
    |||||||| || |||||||| |||||   | |||||||||  |||||||||| |||  || |  |||||||||||||||||||||  || |||| ||| |    
T  12508758 ttactcttatgacctttttctccacatcggtaacaaacaacttcagtaggagtatccttctttatgggcctcttctcatcattcaccctctgctcaccct 12508659  T
Q  218 tgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaat 317  Q
    | ||||| || ||||| || |||||   |||||| || || | ||| ||| | | |||||||||  ||||||||||||||||||||||||  ||||| ||    
T  12508658 tatcagccggagcactgtaaggctttggacgactttgctgactcttacctttcctctcactcatagccttgtaatgagctttcgtatccttctcatagat 12508559  T
Q  318 cctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
     || |||||||| |||| |||||||||||| |  |||||||||||    
T  12508558 tctgcaactgctcaccagttcagaaaagttacagatcttctgata 12508514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 112 - 206
Target Start/End: Complemental strand, 2037111 - 2037017
Alignment:
Q  112 caaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatct 206  Q
    |||||||||||||||||||| || |||||||||||| | |||||||| |||| |||| ||||||||||||| || ||| |||||||| |||||||    
T  2037111 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatcagtcaatct 2037017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 112 - 206
Target Start/End: Complemental strand, 2040852 - 2040758
Alignment:
Q  112 caaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatct 206  Q
    |||||||||||||||||||| || |||||||||||| | |||||||| |||| |||| ||||||||||||| || ||| |||||||| |||||||    
T  2040852 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatcagtcaatct 2040758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 112 - 206
Target Start/End: Original strand, 14039676 - 14039770
Alignment:
Q  112 caaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatct 206  Q
    |||||||||||||||||||| || |||||||||||| | |||||||| |||| |||| ||||||||||||| || ||| |||||||| |||||||    
T  14039676 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatcagtcaatct 14039770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 162
Target Start/End: Complemental strand, 10417319 - 10417194
Alignment:
Q  37 atatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggccttttt 136  Q
    ||||| |||||||||||||| || ||||  ||||| |||||||| || ||||| |||||||||||||| | ||| ||| |||||||||||||||| ||      
T  10417319 atatctccacgcttgcaatccgccaacacatgacctttctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattactcttgtggcccttca 10417220  T
Q  137 caccacacttgaaacaaacaatatca 162  Q
    ||||||| ||| ||||||||| ||||    
T  10417219 caccacatttgtaacaaacaacatca 10417194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 242
Target Start/End: Original strand, 11861198 - 11861403
Alignment:
Q  37 atatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggccttttt 136  Q
    ||||||| | ||||||||||||||||    |||||||||| |||||||| ||| ||||||||| | ||||  | ||||||||| |||||||||||||| |    
T  11861198 atatcactatgcttgcaatcagctaaagtatgacccttcttaccacaccagaaacatttcttcacctcctctggacaaacattgctcttgtggcctttct 11861297  T
Q  137 caccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactata 236  Q
    ||||||| |||||| | ||||| || | |||||||||  || |||| |||| | | |||||   || ||| || || || || |||||||||||||||||    
T  11861298 caccacaattgaaatagacaatctccgcaggagcatccttcttcttaggccgcctatcatcgaccattctctgtttgcctttatcagcaggggcactata 11861397  T
Q  237 cggctt 242  Q
     |||||    
T  11861398 gggctt 11861403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 152
Target Start/End: Original strand, 12501778 - 12501893
Alignment:
Q  37 atatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggccttttt 136  Q
    ||||||||| ||||||||||||||||   |||||||||||  ||||||| ||| ||||||||  | |||| || ||||||||| |||||||||||||| |    
T  12501778 atatcaccatgcttgcaatcagctaatgtgtgacccttcttgccacaccggaaacatttctttacctcctcaggacaaacattgctcttgtggcctttct 12501877  T
Q  137 caccacacttgaaaca 152  Q
    | ||||| ||||||||    
T  12501878 cgccacaattgaaaca 12501893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 366
Target Start/End: Complemental strand, 12843314 - 12843059
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgc 210  Q
    |||| ||||||||||||||||||| ||||||||  |  | || ||||| |||  |||||||||| || || | |||| | |||||||| ||| ||| ||     
T  12843314 acaagcattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatctttcttcctaggccgcctctcatcaatcattctctgt 12843215  T
Q  211 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 310  Q
    || || || |||||||| ||||||||  ||||   ||||||||| || || ||| || | |||||| |||  | |||||||||||| || |||||||| |    
T  12843214 ttgcccttatcagcaggagcactataaagctttggacgactctgctgacctttgacttttcgctcattcacaatcttgtaatgagccttagtatcctcct 12843115  T
Q  311 cataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    |||||||||| |||||||| ||||  || |||||||| |  |||||||| ||||||    
T  12843114 cataaatcctgcaactgctcaccagctcggaaaagttacgaatcttctggtaacca 12843059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 111 - 317
Target Start/End: Complemental strand, 16804158 - 16803952
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgc 210  Q
    ||||||||| |||||||||||||| |||||||| |||||||||  ||| ||||  ||||||||  || |||| |||| | | |||||   || ||| ||     
T  16804158 acaaacattgctcttgtggcctttctcaccacaattgaaacaagtaatctcagctggagcatccttcttcttaggccgcctatcatcgaccattctctgt 16804059  T
Q  211 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 310  Q
    || || || ||||||||||||||||| |||||    |||||||| || ||||||    | |||||| |||  |||||||||||||| || |||||||| |    
T  16804058 ttgcccttatcagcaggggcactatagggcttagggcgactctgctggcccttggtcttccgctcattcacaaccttgtaatgagccttggtatcctcct 16803959  T
Q  311 cataaat 317  Q
    |||||||    
T  16803958 cataaat 16803952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 320
Target Start/End: Original strand, 3688959 - 3689068
Alignment:
Q  211 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 310  Q
    ||||| |||||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| |||||||||||||    
T  3688959 ttacccttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctctt 3689058  T
Q  311 cataaatcct 320  Q
    | || |||||    
T  3689059 cgtagatcct 3689068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 220 - 320
Target Start/End: Original strand, 10008625 - 10008725
Alignment:
Q  220 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 319  Q
    |||||||||||||| ||||||||   ||||||||| |||||||| ||  | | |||| |||  |||||||| ||||| ||||||||||||||||| ||||    
T  10008625 tcagcaggggcactgtacggcttaggacgactctgctgtcccttacccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcc 10008724  T
Q  320 t 320  Q
    |    
T  10008725 t 10008725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 220 - 320
Target Start/End: Original strand, 10909235 - 10909335
Alignment:
Q  220 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 319  Q
    |||||||||||||| ||||||||   ||||||||| |||||||| ||  | | |||| |||  |||||||| ||||| ||||||||||||||||| ||||    
T  10909235 tcagcaggggcactgtacggcttaggacgactctgctgtcccttacccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcc 10909334  T
Q  320 t 320  Q
    |    
T  10909335 t 10909335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 111 - 347
Target Start/End: Original strand, 15262549 - 15262785
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgc 210  Q
    |||| |||||||||| | |||||| ||||||||  |  | || ||||| |||  |||||||||| ||||  |  ||||| |||||||||||| ||| ||     
T  15262549 acaagcattactcttatagcctttctcaccacaagtatagcagacaatctcaacaggagcatctttccttctacgcctcctctcatcattcattctttgt 15262648  T
Q  211 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 310  Q
    ||||| || |||||||| ||  | || |||||   |||||| |||||  | |||||| | |||||| |||  |||||||||||||| || |||||||| |    
T  15262649 ttacccttatcagcaggagcgttgtaaggctttggacgactttgttgatctttgcctttccgctcattcacaaccttgtaatgagccttagtatcctcct 15262748  T
Q  311 cataaatcctacaactgcttaccaattcagaaaagtt 347  Q
    |||| || || |||||||| ||||  |||||||||||    
T  15262749 catagattctgcaactgctcaccagctcagaaaagtt 15262785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 220 - 320
Target Start/End: Complemental strand, 15713161 - 15713061
Alignment:
Q  220 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 319  Q
    ||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| ||||||||||||||||| ||||    
T  15713161 tcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcc 15713062  T
Q  320 t 320  Q
    |    
T  15713061 t 15713061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 323
Target Start/End: Original strand, 6603757 - 6603863
Alignment:
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 316  Q
    |||||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || |||||||| ||||| |    
T  6603757 ttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttggtatcctcctcataga 6603856  T
Q  317 tcctaca 323  Q
    |||||||    
T  6603857 tcctaca 6603863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 23079228 - 23079166
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatc 173  Q
    ||||||||| |||||||||||||| |||||||| || |||||||||||  ||| |||||||||    
T  23079228 acaaacattgctcttgtggcctttctcaccacaattaaaacaaacaatcacagcaggagcatc 23079166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 362
Target Start/End: Complemental strand, 10417079 - 10416994
Alignment:
Q  277 ctcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    |||||||||||||||||||| ||||||||||| |||||||| || || || || |||| ||| || ||  |||| |||||||||||    
T  10417079 ctcatcaccttgtaatgagccttcgtatcctcctcataaattctgcagctactcaccagttctgagaaaattctgatcttctgata 10416994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 242
Target Start/End: Complemental strand, 23415006 - 23414870
Alignment:
Q  106 ttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatc 205  Q
    |||| |||||||||||||||||||||||| || ||| | |||||||| ||||| || | |||||||||  || |||| |||| | | |||||   || ||    
T  23415006 ttaggacaaacattactcttgtggcctttctcgccatagttgaaacagacaatctccgcaggagcatccttcttcttaggccgcctatcatcgaccattc 23414907  T
Q  206 tatgcttaccgttgtcagcaggggcactatacggctt 242  Q
    | || || || || ||||||||||||||||| |||||    
T  23414906 tctgtttgcccttatcagcaggggcactataaggctt 23414870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 320
Target Start/End: Original strand, 6597077 - 6597180
Alignment:
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 316  Q
    |||||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || |||||||| ||||| |    
T  6597077 ttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttggtatcctcctcataga 6597176  T
Q  317 tcct 320  Q
    ||||    
T  6597177 tcct 6597180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 320
Target Start/End: Original strand, 13255712 - 13255815
Alignment:
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 316  Q
    |||||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| ||||| |||||||| || |    
T  13255712 ttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtgtcctcttcgtaga 13255811  T
Q  317 tcct 320  Q
    ||||    
T  13255812 tcct 13255815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 320
Target Start/End: Original strand, 16638795 - 16638898
Alignment:
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 316  Q
    |||||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || |||||||| ||||| |    
T  16638795 ttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttggtatcctcctcataga 16638894  T
Q  317 tcct 320  Q
    ||||    
T  16638895 tcct 16638898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 320
Target Start/End: Original strand, 43165697 - 43165800
Alignment:
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 316  Q
    |||||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || |||||||| ||||| |    
T  43165697 ttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttggtatcctcctcataga 43165796  T
Q  317 tcct 320  Q
    ||||    
T  43165797 tcct 43165800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 15065990 - 15066052
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatc 173  Q
    ||||||||| |||||||||||||| |||||||| || ||||| |||||  ||| |||||||||    
T  15065990 acaaacattgctcttgtggcctttctcaccacaattaaaacagacaatcgcagcaggagcatc 15066052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 327
Target Start/End: Complemental strand, 23079054 - 23079012
Alignment:
Q  285 cttgtaatgagctttcgtatcctcttcataaatcctacaactg 327  Q
    |||||||||||| || |||||||||||||||||||| ||||||    
T  23079054 cttgtaatgagccttggtatcctcttcataaatcctgcaactg 23079012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 362
Target Start/End: Complemental strand, 13317603 - 13317518
Alignment:
Q  277 ctcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    |||||| |||| || ||||| || |||||||| ||||| |||||||||||||| ||||| || || || ||| | |||||||||||    
T  13317603 ctcatcgccttatagtgagcctttgtatcctcctcatatatcctacaactgctcaccaactccgagaaatttatgatcttctgata 13317518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 200; Significance: 1e-109; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 39 - 366
Target Start/End: Complemental strand, 4500 - 4174
Alignment:
Q  39 atcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttca 138  Q
    |||||||||||| |||||||||||   ||| || ||||||||||||||||||||||||||||||||  ||  ||||||||||||||| |||||||| ||     
T  4500 atcaccacgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcatttcttctcatctctatcacaaacattactcttttggcctttctcg 4401  T
Q  139 ccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacg 238  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| || || |||||||| ||||||||||| ||| | ||||    
T  4400 ccacacttgaagcaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcatttaaactctgcttacccttgtcagcaggagcagtgtacg 4301  T
Q  239 gcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattc 338  Q
    |||||  ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||| ||    
T  4300 gcttcggacgactctgttgtcccttgcctctacgttcactcatcaccttgtaatgag-tttcgtatcctcctcataaatcctacagctgcttaccaaatc 4202  T
Q  339 agaaaagtttcttatcttctgataacca 366  Q
    ||| ||||||||||| ||||||||||||    
T  4201 agagaagtttcttattttctgataacca 4174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 153
Target Start/End: Complemental strand, 17142 - 16999
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    |||||||| ||||||||  | || || ||||||||| ||||||| ||||||||   |||||||||||  ||||||| ||| ||||||||| | ||||  |    
T  17142 ccctcttctttgcagttgaaacacacgatatcaccatgcttgcagtcagctaatgtgtgacccttcttgccacaccagaaacatttcttcacctcctctg 17043  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaa 153  Q
     ||||||| | |||||||||||||| |||||||| |||||||||    
T  17042 gacaaacagtgctcttgtggcctttctcaccacaattgaaacaa 16999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 366
Target Start/End: Original strand, 5412 - 5764
Alignment:
Q  13 tcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagt-a 111  Q
    |||||||| ||||| ||||| || | ||| |||||||| |||||||||||   ||| || |||||||||||||||||||| ||||||||||| |  || |    
T  5412 tcttcattacagttgtagcaaacaacatccccacgcttacaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatc-tcggtca 5510  T
Q  112 caaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgct 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  5511 caaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgg-cctcctctcatcattcaatctctgct 5609  T
Q  212 taccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttc 311  Q
    |||| ||||||| ||||||||| |||||||||  | ||||||| ||||||||| ||||| ||||||||||||| |||||||||||||| |||||||||||    
T  5610 tacccttgtcagtaggggcactgtacggcttccgatgactctgctgtcccttgactctatgctcactcatcactttgtaatgagctttggtatcctcttc 5709  T
Q  312 ataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    ||||||| |  | || |||||||||||||||||||| ||||||||||||||||||    
T  5710 ataaatcttgtagctacttaccaattcagaaaagttccttatcttctgataacca 5764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 193; Significance: 1e-105; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 2 - 362
Target Start/End: Complemental strand, 98667 - 98307
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    |||| ||||||||||| ||||||||||| ||||| | |||||||||||||||||||||||    ||| || ||||||||||||||||| || ||||||||    
T  98667 tgatatggccctcttcgttgcagttataacatacaacatcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctc 98568  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    ||| ||||||||||||||||||||||||||||| || ||||||||| ||||||| || |||| |||||||||||||| |||||||||| ||||||||||     
T  98567 atctttagtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaggagcatctctccacttgggcctcctctcatcattt 98468  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    || || |||||||| ||||||||| | |||||||| ||||||  |||||||||||||||||| ||||| |  |||||||| |||||||||||||| ||||    
T  98467 aacctctgcttacccttgtcagcatgagcactatatggcttcggacgactctgttgtcccttacctctcctttcactcattaccttgtaatgagccttcg 98368  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    ||||||||||||  |||||||| ||||||||||| |||||||||||||| |||||||||||    
T  98367 tatcctcttcattgatcctacagctgcttaccaactcagaaaagtttctgatcttctgata 98307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 25 - 356
Target Start/End: Original strand, 176230 - 176561
Alignment:
Q  25 ttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactct 124  Q
    |||||||| || | ||||||||||||||||||||||||   ||| || ||||  |||||||| || || |||||||||||      ||| ||||||||||    
T  176230 ttatagcaaacaacatcaccacgcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttctcatcacggtcacatacattactct 176329  T
Q  125 tgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagc 224  Q
    |||||||||||||||||||||||||||| ||||| || |||||||||||||||||| | |||||| |||||||||||| ||| || ||| | ||||  ||    
T  176330 tgtggcctttttcaccacacttgaaacagacaatctctgtaggagcatctctcctcctaggcctcctctcatcattcagtctctgtttaactttgttggc 176429  T
Q  225 aggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaa 324  Q
    ||| ||||||||||| |||  ||||||||| |||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||     
T  176430 aggagcactatacggtttcggacgactctgctgtcccttacctctacgctcactcatcaccttataatgagcttttgtatcctcttcatagatcctacag 176529  T
Q  325 ctgcttaccaattcagaaaagtttcttatctt 356  Q
    || || ||||| ||| ||||||| ||||||||    
T  176530 ctactcaccaaatcataaaagttccttatctt 176561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1433 (Bit Score: 191; Significance: 1e-103; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 28 - 366
Target Start/End: Complemental strand, 1369 - 1031
Alignment:
Q  28 tagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgt 127  Q
    ||||| || ||||| |||||||| || ||||||||   ||| || |||||||||||||||||||| |||||||||||  ||  |||| ||||||||||||    
T  1369 tagcaaacaatatccccacgcttacattcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaagcattactcttgt 1270  T
Q  128 ggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcagg 227  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||| ||||||||||||  || || ||||| |||||||||||    
T  1269 ggcctttttcaccacacttgaaacaaattatctcagtaggagcatctctcctcttgggcctcctctcatcattcagcctctgtttacccttgtcagcagg 1170  T
Q  228 ggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactg 327  Q
     ||||| || ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  1169 agcactgtatggcttcggacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcatagatcctacagctg 1070  T
Q  328 cttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    |||||||| ||||| ||||||||||| |||  |||||||    
T  1069 cttaccaaatcagagaagtttcttattttcgaataacca 1031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 191; Significance: 1e-103; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 28 - 366
Target Start/End: Original strand, 7990 - 8328
Alignment:
Q  28 tagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgt 127  Q
    ||||| || ||||| |||||||| || ||||||||   ||| || |||||||||||||||||||| |||||||||||  ||  |||| ||||||||||||    
T  7990 tagcaaacaatatccccacgcttacattcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaagcattactcttgt 8089  T
Q  128 ggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcagg 227  Q
    |||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||| ||||||||||||  || || ||||| |||||||||||    
T  8090 ggcctttttcaccacacttgaaacaaattatctcagtaggagcatctctcctcttgggcctcctctcatcattcagcctctgtttacccttgtcagcagg 8189  T
Q  228 ggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactg 327  Q
     ||||| || ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  8190 agcactgtatggcttcggacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcatagatcctacagctg 8289  T
Q  328 cttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    |||||||| ||||| ||||||||||| |||  |||||||    
T  8290 cttaccaaatcagagaagtttcttattttcgaataacca 8328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 189; Significance: 1e-102; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 70 - 366
Target Start/End: Original strand, 29912 - 30208
Alignment:
Q  70 cccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggag 169  Q
    ||||| ||||||||||||||||| |||||||||||  ||  |||||| ||||||||||||||||| |||||||||||||| ||||| || |||||||||     
T  29912 cccttttgaccacacctgaagcacttcttctcatctctatcacaaacgttactcttgtggcctttctcaccacacttgaagcaaactatgtcagtaggaa 30011  T
Q  170 catctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctct 269  Q
    |||||||||||||||||||| |||||||||| || || |||||||| ||||||||||| |||||||||||||||  ||||||||| ||||||||||||||    
T  30012 catctctcctcttgggcctcctctcatcatttaaactctgcttacccttgtcagcaggagcactatacggcttcggacgactctgctgtcccttgcctct 30111  T
Q  270 acgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||||    
T  30112 acgctcactcatcaccttgtaatgagctttcgtgtcctcctcataaatcctacagctgcttaccaaatcagagaagtttcttattttctgataacca 30208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 7 - 341
Target Start/End: Complemental strand, 64681 - 64347
Alignment:
Q  7 tggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatcct 106  Q
    |||||||||||||  || |||||||| |||| ||||||||||||||||| |||||    ||| || ||||||||||||||||| ||||||||||||||||    
T  64681 tggccctcttcatcacaattatagcaaactacatcaccacgcttgcaattagctagtgtgtgtcctttctgaccacacctgaaacatttcttctcatcct 64582  T
Q  107 tagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatct 206  Q
    | |||||||||||||||||||||||||| || ||||||||| ||||||| || |||| ||||||||| ||||| || |||||| | |||||||||| |||    
T  64581 tggtacaaacattactcttgtggcctttctcgccacacttgtaacaaactatctcagcaggagcatccctcctattcggcctcctttcatcattcagtct 64482  T
Q  207 atgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcc 306  Q
     ||||| || |||||||| |||||||||||||| ||   ||||||||| |||||||| ||||| ||||||||||||||||| ||||||||||| |  |||    
T  64481 ctgctttcccttgtcagccggggcactatacggtttaggacgactctgctgtcccttacctcttcgctcactcatcaccttataatgagcttttgagtcc 64382  T
Q  307 tcttcataaatcctacaactgcttaccaattcaga 341  Q
    || ||||| ||||| ||||  |||||||| |||||    
T  64381 tcctcatatatcctgcaacgacttaccaaatcaga 64347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 7 - 362
Target Start/End: Complemental strand, 49259 - 48904
Alignment:
Q  7 tggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatcct 106  Q
    |||||||||||||  || |||||||| |||| ||||||||||||||||| |||||    ||| || ||||||||||||||||| ||||||||||||||||    
T  49259 tggccctcttcatcacaattatagcaaactacatcaccacgcttgcaattagctagtgtgtgtcctttctgaccacacctgaaacatttcttctcatcct 49160  T
Q  107 tagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatct 206  Q
    | ||||||||||||||||||||||| || || ||||||||| ||||||| || |||| ||||||||| ||||| || |||||| | |||||||||| |||    
T  49159 tggtacaaacattactcttgtggcccttctcgccacacttgtaacaaactatctcagcaggagcatccctcctattcggcctcctttcatcattcagtct 49060  T
Q  207 atgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcc 306  Q
     ||||| || |||||||| |||||||||||||| ||   ||||||||| |||||||| ||||| ||||||||||||||||| ||||||||||| |  |||    
T  49059 ctgctttcccttgtcagccggggcactatacggtttaggacgactctgctgtcccttacctcttcgctcactcatcaccttataatgagcttttgagtcc 48960  T
Q  307 tcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    || ||||| ||||| ||||  |||||||| ||||| ||  |||| |||| ||||||    
T  48959 tcctcatatatcctgcaacgacttaccaaatcagagaaaattctaatctgctgata 48904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 7 - 362
Target Start/End: Complemental strand, 58293 - 57938
Alignment:
Q  7 tggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatcct 106  Q
    |||||||||||||  || |||||||| |||| ||||||||||||||||| |||||    ||| || ||||||||||||||||| ||||||||||||||||    
T  58293 tggccctcttcatcacaattatagcaaactacatcaccacgcttgcaattagctagtgtgtgtcctttctgaccacacctgaaacatttcttctcatcct 58194  T
Q  107 tagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatct 206  Q
    | ||||||||||||||||||||||| || || ||||||||| ||||||| || |||| ||||||||| ||||| || |||||| | |||||||||| |||    
T  58193 tggtacaaacattactcttgtggcccttctcgccacacttgtaacaaactatctcagcaggagcatccctcctattcggcctcctttcatcattcagtct 58094  T
Q  207 atgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcc 306  Q
     ||||| || |||||||| |||||||||||||| ||   ||||||||| |||||||| ||||| ||||||||||||||||| ||||||||||| |  |||    
T  58093 ctgctttcccttgtcagccggggcactatacggtttaggacgactctgctgtcccttacctcttcgctcactcatcaccttataatgagcttttgagtcc 57994  T
Q  307 tcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    || ||||| ||||| ||||  |||||||| ||||| ||  |||| |||| ||||||    
T  57993 tcctcatatatcctgcaacgacttaccaaatcagagaaaattctaatctgctgata 57938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 16 - 362
Target Start/End: Original strand, 37173 - 37519
Alignment:
Q  16 tcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaa 115  Q
    ||||||||||||||||| || ||||| |||| ||| ||||||||||    ||| ||||||||||||||||||||||| ||||||||||| |||  |||||    
T  37173 tcattgcagttatagcaaacaatatccccacacttacaatcagctagtgtgtgtcccttctgaccacacctgaagcacttcttctcatctttatcacaaa 37272  T
Q  116 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttacc 215  Q
    ||||||||||||||||||| || ||||||||||| |||| ||||||||||||||  |||||||||||||||||| |||||||||||||||| ||||||||    
T  37273 cattactcttgtggcctttctcgccacacttgaagcaaaaaatatcagtaggagtgtctctcctcttgggcctcctctcatcattcaatctctgcttacc 37372  T
Q  216 gttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataa 315  Q
     ||||| ||| | |||||||||||||||  ||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||     
T  37373 cttgtcggcaagagcactatacggcttcggacgactctgctgtcccttacctctacgttcactcatcaccttgtaatgagctttcgtatcttcttcatag 37472  T
Q  316 atcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    |||||||| ||||||| ||  ||| |||||||||| || ||||||||    
T  37473 atcctacagctgcttaacagctcataaaagtttctaattttctgata 37519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 184; Significance: 2e-99; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 111 - 366
Target Start/End: Complemental strand, 5877 - 5622
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgc 210  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||    
T  5877 acaaacattactcttgtggcctttttcaccacacttgtaataaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattcagtctctgc 5778  T
Q  211 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 310  Q
    ||||| ||||||||||| |||||||||||||||  | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5777 ttacccttgtcagcaggagcactatacggcttcggatgactctgctgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcttctt 5678  T
Q  311 cataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    |||| |||||||| ||||||||||| ||||| |||||| |||| ||||||||||||    
T  5677 catagatcctacagctgcttaccaaatcagagaagtttattattttctgataacca 5622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 183; Significance: 6e-99; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 16 - 366
Target Start/End: Original strand, 153726 - 154076
Alignment:
Q  16 tcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaa 115  Q
    ||||||||||||||||| || || || |||||||| |||||||||||   ||| || |||||||||||||||||||| |||||||||||  ||  ||| |    
T  153726 tcattgcagttatagcaaacaatgtctccacgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaga 153825  T
Q  116 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttacc 215  Q
    |||||||||| |||| |||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||| |||||||||||| ||  ||||||||    
T  153826 cattactcttatggcttttttcaccacacttgaagcaaacaatctcagtgggagcatctctcctcttgggcctcctctcatcattcagtcgctgcttacc 153925  T
Q  216 gttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataa 315  Q
     ||||||||||| |||||||| ||||||  ||||||||| |||||||| |||||  | |||| |||||||||||||||||||||||| ||||| ||||||    
T  153926 cttgtcagcaggagcactatatggcttcggacgactctgctgtcccttacctctttgttcacccatcaccttgtaatgagctttcgtctcctcctcataa 154025  T
Q  316 atcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    |||||||| ||||||||||| ||||| |||||||| |||||||||||||||    
T  154026 atcctacagctgcttaccaactcagagaagtttctaatcttctgataacca 154076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 181; Significance: 1e-97; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 2 - 362
Target Start/End: Complemental strand, 14377142 - 14376782
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    |||||||||||||||||||||||||||| || || | |||||||||||| |||| ||||||   ||| || |||||||||||||||||||| ||||||||    
T  14377142 tgatgtggccctcttcattgcagttataacaaacaacatcaccacgcttacaattagctaaagtgtgtcctttctgaccacacctgaagcacttcttctc 14377043  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    ||| ||||||||||||||||||||||||||||| ||||| |||||| | ||||||| ||||  ||||||||||||||| ||||| ||| |||||||||||    
T  14377042 atctttagtacaaacattactcttgtggcctttctcaccgcacttgtagcaaacaacatcaacaggagcatctctcctattgggtctcctctcatcattc 14376943  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    || || || || || ||||||||||| |||||||||||||||  ||||||||| ||||||||||  || || ||||||||||||||||||||||||||||    
T  14376942 aacctctgttttcccttgtcagcaggagcactatacggcttcggacgactctgctgtcccttgctccttcgatcactcatcaccttgtaatgagctttcg 14376843  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    | ||||| ||||| ||||| || || || ||||||||||| |||||||| |||||||||||    
T  14376842 tgtcctcctcatagatcctgcagctactaaccaattcagagaagtttctgatcttctgata 14376782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 2 - 359
Target Start/End: Original strand, 18797745 - 18798102
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    |||| ||||| || ||||||||||||||||| || |  ||||||||||||||||||||||    ||| |||||||||||||||||||| ||||||| |||    
T  18797745 tgatatggccttcatcattgcagttatagcaaacaacgtcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaaacatttctgctc 18797844  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    ||| ||||| ||||||||||||||||||||||| || ||||||||  |||||||||||||   ||||||||| ||||||||||||||| |||||||||||    
T  18797845 atctttagtgcaaacattactcttgtggcctttctcgccacacttataacaaacaatatccacaggagcatccctcctcttgggcctcctctcatcattc 18797944  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    ||||| ||||| || ||||||||||| |||||||||||||||  ||||||||| |||||||||||||| || |||||||||||||||||||||||||  |    
T  18797945 aatctttgctttcccttgtcagcaggagcactatacggcttcggacgactctgctgtcccttgcctctgcggtcactcatcaccttgtaatgagcttctg 18798044  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctg 359  Q
    | ||||||||||| || || || || |||||||| ||||| |||||||| ||||||||    
T  18798045 tgtcctcttcatagattctgcagctacttaccaactcagagaagtttctgatcttctg 18798102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 2 - 362
Target Start/End: Original strand, 19438057 - 19438417
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    |||| |||| |||||| ||||||||||| ||||| | |||||||||||||||||||||||    ||| || ||||||||||||||||| || || |||||    
T  19438057 tgatatggcgctcttcgttgcagttataacatacaacatcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttattctc 19438156  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    ||| ||||||||||||||||||  ||||||||| |||||||||||| ||| ||| || |||| ||||||||||||||||||||||||| ||||||||||     
T  19438157 atctttagtacaaacattactcaagtggcctttctcaccacacttgtaacgaacgatctcagcaggagcatctctcctcttgggcctcctctcatcattt 19438256  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    || || |||||||| ||||||||||| |||||||| ||||||  ||||||||| |||||||| ||||| |  |||||||  |||||||||| ||| ||||    
T  19438257 aacctctgcttacccttgtcagcaggagcactatatggcttcggacgactctgctgtcccttacctctcctttcactcactaccttgtaataagccttcg 19438356  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    ||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||||||    
T  19438357 tatcctcttcatagatcctacagctgcttaccaactcagaaaagtttctgatcttctgata 19438417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 73 - 362
Target Start/End: Complemental strand, 21567146 - 21566857
Alignment:
Q  73 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcat 172  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| || |||||||| || ||||| || |||| ||||||||    
T  21567146 ttctgaccacacctgaagcacttcttctcatctttagtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagcat 21567047  T
Q  173 ctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacg 272  Q
    ||||||||||||||||  |||||||||||| ||  ||||| || ||||||||||||||||| ||||||||   |||||||||||||||||| |  || ||    
T  21567046 ctctcctcttgggccttctctcatcattcagtcgttgctttcccttgtcagcaggggcactgtacggcttaggacgactctgttgtcccttactcctccg 21566947  T
Q  273 ctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    ||||||||||||||||||||||||||| | ||| || ||||| || ||||| ||||||||||| ||||||||  | || |||||||||||    
T  21566946 ctcactcatcaccttgtaatgagcttttgaatcttcctcatagattctacagctgcttaccaactcagaaaaagtcctgatcttctgata 21566857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 73 - 305
Target Start/End: Complemental strand, 24515569 - 24515337
Alignment:
Q  73 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcat 172  Q
    ||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||  ||||||||    
T  24515569 ttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctcaccacacttataacaaacaatatcaacaggagcat 24515470  T
Q  173 ctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacg 272  Q
    ||||||||||||||||| ||||||||||||  || || || || ||||||||||| |||||||| || ||   |||||||||||||||||||||||| ||    
T  24515469 ctctcctcttgggcctcctctcatcattcagcctctgttttcccttgtcagcaggagcactatatggtttaggacgactctgttgtcccttgcctctgcg 24515370  T
Q  273 ctcactcatcaccttgtaatgagctttcgtatc 305  Q
     ||||||||||||||||||||||||||||||||    
T  24515369 gtcactcatcaccttgtaatgagctttcgtatc 24515337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 117 - 356
Target Start/End: Original strand, 25771014 - 25771253
Alignment:
Q  117 attactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccg 216  Q
    |||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||| ||||||||||||  || || |||||     
T  25771014 attattcttgtggcctttttcaccacacttgaaacagacaatctcagtaggagcatctctcctcttaggcctcctctcatcattcagcctctgtttacct 25771113  T
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 316  Q
    ||||||||||| ||||||||||| | |  |||||||||||||||||| ||||| ||||||||||||||  | ||||||||||| ||||||||||||||||    
T  25771114 ttgtcagcaggagcactatacggttacggacgactctgttgtcccttacctctgcgctcactcatcactctataatgagcttttgtatcctcttcataaa 25771213  T
Q  317 tcctacaactgcttaccaattcagaaaagtttcttatctt 356  Q
    ||||||| ||||||||||| |||||||| || ||||||||    
T  25771214 tcctacagctgcttaccaactcagaaaaattccttatctt 25771253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 19 - 362
Target Start/End: Original strand, 19456095 - 19456438
Alignment:
Q  19 ttgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacat 118  Q
    |||||||||||||| || || || |||||||| |||||| |||    ||| || |||||||  ||||||||||| |||||||||||  ||  ||| ||||    
T  19456095 ttgcagttatagcaaacaatgtctccacgcttacaatcatctagtgtgtgtcctttctgacaccacctgaagcacttcttctcatctctatcacagacat 19456194  T
Q  119 tactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgtt 218  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||| ||||||||||||  || || || || ||    
T  19456195 tactcttgtggcctttttcaccacacttgaagcaaacaatctcagtaggagtatctctcctcttgggcctcctctcatcattcagcctttgttttccttt 19456294  T
Q  219 gtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatc 318  Q
    ||||||||| |||||||| || ||   |||||||||||||||||| ||||| || ||||||| || |||||||||||| || |||||||||||||| |||    
T  19456295 gtcagcaggagcactatatggtttaggacgactctgttgtcccttacctctgcgttcactcaccagcttgtaatgagccttagtatcctcttcatatatc 19456394  T
Q  319 ctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    || || |||||||| || || || || ||||||||||| |||||    
T  19456395 ctgcagctgcttactaactctgagaaatttcttatcttttgata 19456438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 19 - 362
Target Start/End: Original strand, 19466240 - 19466583
Alignment:
Q  19 ttgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacat 118  Q
    |||||||||||||| || || || |||||||| |||||| |||    ||| || |||||||  ||||||||||| |||||||||||  ||  ||| ||||    
T  19466240 ttgcagttatagcaaacaatgtctccacgcttacaatcatctagtgtgtgtcctttctgacaccacctgaagcacttcttctcatctctatcacagacat 19466339  T
Q  119 tactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgtt 218  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||| ||||||||||||  || || || || ||    
T  19466340 tactcttgtggcctttttcaccacacttgaagcaaacaatctcagtaggagtatctctcctcttgggcctcctctcatcattcagcctttgttttccttt 19466439  T
Q  219 gtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatc 318  Q
    ||||||||| |||||||| || ||   |||||||||||||||||| ||||| || ||||||| || |||||||||||| || |||||||||||||| |||    
T  19466440 gtcagcaggagcactatatggtttaggacgactctgttgtcccttacctctgcgttcactcaccagcttgtaatgagccttagtatcctcttcatatatc 19466539  T
Q  319 ctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    || || |||||||| || || || || ||||||||||| |||||    
T  19466540 ctgcagctgcttactaactctgagaaatttcttatcttttgata 19466583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 10 - 356
Target Start/End: Original strand, 21474663 - 21474993
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    ||||||||||  || || ||||| || ||||||||||||||||| ||||| ||   ||| || ||||  ||||| | ||| || |||||||||||         
T  21474663 ccctcttcatcacaattgtagcacacaatatcaccacgcttgcactcagccaatgtgtgtcctttcttcccacatcggaaacacttcttctcatcacggt 21474762  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatg 209  Q
     ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||| ||||||||||||   | ||    
T  21474763 cacatacattactcttgtggcctttttcaccacacttgaaacaaacaatctcagtaggagcatctctcctcctaggcctcctctcatcattcagcatctg 21474862  T
Q  210 cttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctct 309  Q
    |||||| ||||||||||| |||||||||||||||  |||||||||                ||||||||||||||||| ||||||||||| |||||||||    
T  21474863 cttacccttgtcagcaggagcactatacggcttcggacgactctg----------------cgctcactcatcaccttataatgagcttttgtatcctct 21474946  T
Q  310 tcataaatcctacaactgcttaccaattcagaaaagtttcttatctt 356  Q
    |||||||||||||| |||||||||||||||||||| || ||||||||    
T  21474947 tcataaatcctacagctgcttaccaattcagaaaaattccttatctt 21474993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 13 - 362
Target Start/End: Complemental strand, 10466063 - 10465714
Alignment:
Q  13 tcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtac 112  Q
    |||||||||||||||||||| || || || |||||||| || |||||||    ||| ||||||||||||||||| || |||||| |||||||  ||  ||    
T  10466063 tcttcattgcagttatagcagacaatgtccccacgcttacattcagctagggtgtgtcccttctgaccacacctaaaacatttcctctcatctctaccac 10465964  T
Q  113 aaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgctt 212  Q
    || |||| ||||||||||||||||||||||||||| |||| ||||| |||| |||| |||||||||||||||||||| | |||||||||| | | |||||    
T  10465963 aagcattgctcttgtggcctttttcaccacacttgtaacagacaatctcagcaggaacatctctcctcttgggcctcctatcatcattcattttctgctt 10465864  T
Q  213 accgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttca 312  Q
     || ||||||||| | ||| | || |||||   ||||||||| |||||||| || || | ||||||||||||||||||||||||||| || || || |||    
T  10465863 tcccttgtcagcaagagcattgtaaggcttaggacgactctgctgtcccttacccctcctctcactcatcaccttgtaatgagcttttgtgtcttcctca 10465764  T
Q  313 taaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    || ||||| || ||||| ||||| ||||| ||   ||| |||||||||||    
T  10465763 tatatcctgcagctgctcaccaactcagagaaaactctaatcttctgata 10465714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 17 - 296
Target Start/End: Complemental strand, 34642797 - 34642517
Alignment:
Q  17 cattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaac 116  Q
    |||||||||| |||||||| ||||||||||| || ||||||||||||| |||||||||||| |||||||||||||| ||||||||||| || ||||||||    
T  34642797 cattgcagttgtagcatacaatatcaccacgtttacaatcagctaacacgtgacccttctgtccacacctgaagcacttcttctcatctttggtacaaac 34642698  T
Q  117 attactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctctt-gggcctcttctcatcattcaatctatgcttacc 215  Q
    |||||| |||||||| || || |||||||| || ||||| || || | |||||  ||||| | ||| ||| ||| | |||||||||| ||  ||||| ||    
T  34642697 attacttttgtggcccttctcgccacacttaaagcaaactatctccgcaggagtgtctcttcccttggggtctcctttcatcattcagtcgttgctttcc 34642598  T
Q  216 gttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagc 296  Q
     ||  ||||||| ||||||||||||||   ||||||||||||||||||||| || || |||||||||||||||||||||||    
T  34642597 cttaccagcaggagcactatacggcttaggacgactctgttgtcccttgcccctccgttcactcatcaccttgtaatgagc 34642517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 87 - 366
Target Start/End: Complemental strand, 19486435 - 19486156
Alignment:
Q  87 gaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggc 186  Q
    |||||| |||||||||||   | | |||||||||||||||||||| || |||||||||||| | |||||||| ||||||||| ||||||| ||||| ||     
T  19486435 gaagcacttcttctcatcaccattgcaaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggaacatctcttctcttaggt 19486336  T
Q  187 ctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcacct 286  Q
    ||| |||||||||||||||| ||||| || ||||||||||| ||||| || |||||| ||||||  || || || |||   || ||||||||||| ||||    
T  19486335 ctcctctcatcattcaatctttgcttccctttgtcagcaggagcactgtagggcttcgaacgaccttgctggcctttgttcctccgctcactcataacct 19486236  T
Q  287 tgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    ||||||||||||| ||||||||||| || || ||||||||||| |||||||||||||| |  || |||||||||||||||    
T  19486235 tgtaatgagctttggtatcctcttcgtagattctacaactgctcaccaattcagaaaattgcctaatcttctgataacca 19486156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 46 - 299
Target Start/End: Original strand, 24367499 - 24367752
Alignment:
Q  46 cgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacact 145  Q
    |||||||| ||||||||   ||||||||||||||||||||||||||| ||| | |||||  |   |||||||||||||||||||||||| ||||||||||    
T  24367499 cgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacact 24367598  T
Q  146 tgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttcta 245  Q
    || | |||||||| |||  | ||||||||||||||||||||||| | ||||||  ||   | ||||| || ||||||||||| ||||| || |||||       
T  24367599 tgtagcaaacaatctcaacatgagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttagg 24367698  T
Q  246 acgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttt 299  Q
    |||| |||| |||||||| || || | ||||||||| | |||||||||||||||    
T  24367699 acgattctgctgtcccttacccctcctctcactcattatcttgtaatgagcttt 24367752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 112 - 366
Target Start/End: Complemental strand, 8720821 - 8720567
Alignment:
Q  112 caaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgct 211  Q
    ||||||||||||||||||||||| |||||||||||| | |||||||| |||  |||| ||||||||||||| |||||| ||||||||||||||||| | |    
T  8720821 caaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcatcaggatcatctctcctcttaggcctcctctcatcattcaatctaggtt 8720722  T
Q  212 taccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttc 311  Q
      || ||||   |||| ||||| || || |||  |||||  ||||| ||||||   || |||||  || | | |||||| |||||||| |||||||| ||    
T  8720721 cccctttgtttacaggagcactgtagggtttcggacgaccttgttgacccttgttcctccgctcgttcctaatcttgtagtgagctttggtatcctcctc 8720622  T
Q  312 ataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    ||| |||||||| || || ||||| || |||||||| ||||||||||||||||||    
T  8720621 atatatcctacagctactcaccaactcggaaaagttccttatcttctgataacca 8720567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 323
Target Start/End: Original strand, 15462393 - 15462712
Alignment:
Q  4 atgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcat 103  Q
    ||||||||||| |||   |||||||| || || ||||| || |||||||| ||||| ||||  ||||| |||||||| || ||||| |||||||||||||    
T  15462393 atgtggccctcctcaccacagttataacacacgatatctccccgcttgcactcagccaacacatgacctttctgaccgcatctgaaacatttcttctcat 15462492  T
Q  104 ccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaa 203  Q
    |  | || || ||||||||||||||||||||  ||||||||||| |||| |||| ||||  |||||  |||||||   | |||  | |||||||||||||    
T  15462493 ctctggtgcagacattactcttgtggcctttcgcaccacacttgtaacacacaacatcaacaggagtctctctccctctaggctgcctctcatcattcaa 15462592  T
Q  204 tctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgta 303  Q
    ||| || || || |||| |||||| ||||| || ||||||   |||||    || |||||    ||   |||||||||||||||||||||||||||||||    
T  15462593 tctctgtttgcctttgttagcaggagcactgtagggcttcgggcgactactctgacccttattcctcttctcactcatcaccttgtaatgagctttcgta 15462692  T
Q  304 tcctcttcataaatcctaca 323  Q
    ||||| ||||||||||||||    
T  15462693 tcctcctcataaatcctaca 15462712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 112 - 366
Target Start/End: Original strand, 16813805 - 16814059
Alignment:
Q  112 caaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgct 211  Q
    ||||||||||||||||||||||| |||||||||||| | |||||||| |||| |||| ||||||||||||| || ||| |||||||||||||||| || |    
T  16813805 caaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatcattcaatctctgtt 16813904  T
Q  212 taccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttc 311  Q
      || ||||   |||| ||||| || || |||  |||||  ||||| ||||||   || |||||| || | | ||| || |||||||| |||||||| ||    
T  16813905 cccctttgtttacaggagcactgtagggtttcggacgaccttgttgacccttgttcctccgctcattcctaatcttatagtgagctttggtatcctcctc 16814004  T
Q  312 ataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    ||| ||| |  | || || ||||| || |||||||||||||||||||||||||||    
T  16814005 atatatcatgtagctactcaccaactcggaaaagtttcttatcttctgataacca 16814059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 37 - 362
Target Start/End: Complemental strand, 20010693 - 20010367
Alignment:
Q  37 atatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggccttttt 136  Q
    ||||| ||||||||||| ||||| ||||  |||||||||||||| || ||||| |||||||||||||| |  || ||| |||||||||||||||| ||      
T  20010693 atatctccacgcttgcattcagccaacatatgacccttctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggcccttca 20010594  T
Q  137 caccacacttgaaacaa-acaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactat 235  Q
    ||||||| ||| ||||| |||| ||||  |||||||| ||||| ||| |||  | |||||||||||||||| || || || |||| || ||| ||||| |    
T  20010593 caccacatttgtaacaatacaacatcaacaggagcatttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagtaggagcactgt 20010494  T
Q  236 acggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaa 335  Q
    | ||||||   |||||    || |||||    ||   ||| ||||||||||| |||||||| || |||||||| |||||||| ||||| || || |||||    
T  20010493 agggcttcgggcgactactctgacccttattccttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaa 20010394  T
Q  336 ttcagaaaagtttcttatcttctgata 362  Q
    ||| || ||  |||| |||||||||||    
T  20010393 ttctgagaaaattctgatcttctgata 20010367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 111 - 344
Target Start/End: Complemental strand, 30678141 - 30677908
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgc 210  Q
    ||||||||||||||||||||  || |||||||||||| | |||||||  |||| ||||| |||| || |  | |||||| ||||||||||||  || |||    
T  30678141 acaaacattactcttgtggctcttctcaccacacttgtagcaaacaacctcagcaggagtatctttctttctaggcctcctctcatcattcaccctttgc 30678042  T
Q  211 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 310  Q
    ||||  || |||||||| ||  | || |||||   |||| |||| || | ||| || || ||||||||||| |||||||||| |||||| ||||| || |    
T  30678041 ttacatttatcagcaggagcgttgtaaggctttggacgattctgctgactcttacccctccgctcactcataaccttgtaattagctttggtatcttcct 30677942  T
Q  311 cataaatcctacaactgcttaccaattcagaaaa 344  Q
    |||| ||||| |||||||| || |||||||||||    
T  30677941 catagatcctgcaactgctcactaattcagaaaa 30677908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 347
Target Start/End: Original strand, 18660080 - 18660319
Alignment:
Q  108 agtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatcta 207  Q
    ||||||| ||||||||||||| | ||| || |||||   | |||||||||  |||||||||   ||| |||||||||| | | |||||||||| |  ||     
T  18660080 agtacaagcattactcttgtgacatttctctccacatcggtaacaaacaacttcagtaggattctctttcctcttgggtcccctctcatcattaaccctc 18660179  T
Q  208 tgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcct 307  Q
    |||| ||| || |||||||| ||||| || |||||   |||||| || || | ||| ||| | | ||||||||   ||||||||||||||||||||||||    
T  18660180 tgctcacccttatcagcaggagcactgtaaggctttggacgactttgctgactcttacctttcctctcactcacagccttgtaatgagctttcgtatcct 18660279  T
Q  308 cttcataaatcctacaactgcttaccaattcagaaaagtt 347  Q
    | ||||| || || |||||||| |||| ||||||||||||    
T  18660280 cctcatagattctgcaactgctcaccagttcagaaaagtt 18660319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 366
Target Start/End: Original strand, 19881588 - 19881815
Alignment:
Q  139 ccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacg 238  Q
    |||||||| || ||||| || |||| |||||  ||||| | |||||| ||  |||||||||||| ||  ||||| || ||  |||||||||| || ||||    
T  19881588 ccacacttaaagcaaactatctcagcaggagtgtctcttcccttgggtcttctctcatcattcagtcgttgctttcccttaccagcaggggcgctgtacg 19881687  T
Q  239 gcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattc 338  Q
    ||||   |||||| |||||| ||||||| || || ||||||||||||||||||||||| || | ||| |||||||| || || || || |||| ||| ||    
T  19881688 gcttaggacgactttgttgttccttgcccctccgttcactcatcaccttgtaatgagcctttgaatcttcttcatagattctgcagctacttatcaactc 19881787  T
Q  339 agaaaagtttcttatcttctgataacca 366  Q
     ||||   |||| |||||||||||||||    
T  19881788 ggaaagagttctgatcttctgataacca 19881815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 366
Target Start/End: Original strand, 23081587 - 23081842
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgc 210  Q
    |||| ||||||||||||||||||| ||||||||  |  |||||||||| |||  |||||||||| || || | |||| | |||||||||| | ||| |||    
T  23081587 acaagcattactcttgtggcctttctcaccacaagtataacaaacaatctcaacaggagcatctttcttcctaggccgcctctcatcattaactctttgc 23081686  T
Q  211 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 310  Q
    || || || |||||||  ||||| || |||||   ||||||||| || || ||| || | |||||| |||  | |||||||||||| || |||||||| |    
T  23081687 tttcctttatcagcagcagcactgtaaggctttggacgactctgctgacctttgactttccgctcattcacaatcttgtaatgagccttagtatcctcct 23081786  T
Q  311 cataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    ||||||| || |||||||| || |  ||||||||| | |  |||||||| ||||||    
T  23081787 cataaattctgcaactgctcactagctcagaaaaggtacgaatcttctggtaacca 23081842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 220 - 320
Target Start/End: Complemental strand, 5836239 - 5836139
Alignment:
Q  220 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 319  Q
    |||||||||||||||||||||||   |||||||||||||||||||||  | |||||| |||    |||||| |||||||| ||||||||||| |||||||    
T  5836239 tcagcaggggcactatacggcttaggacgactctgttgtcccttgcccttccgctcattcacagtcttgtagtgagctttggtatcctcttcgtaaatcc 5836140  T
Q  320 t 320  Q
    |    
T  5836139 t 5836139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 345
Target Start/End: Complemental strand, 25958864 - 25958636
Alignment:
Q  117 attactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccg 216  Q
    ||||||| |||||||||| | ||||||| || | |||||||| ||||||||||||||||| ||||| || ||| ||||||||| || ||| ||||  ||     
T  25958864 attactcctgtggcctttcttaccacacctgtagcaaacaatctcagtaggagcatctctactcttaggtctcctctcatcatccagtctttgctcccct 25958765  T
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 316  Q
    | |||| || | |||||||| |||||   |||||| || || || || |||||   |||  |||  | |||||| |||||| | |||||||| |||||||    
T  25958764 tcgtcaacaagagcactataaggctttggacgactttgctgcccttttcctctcttctctttcactatcttgtagtgagctctagtatcctcctcataaa 25958665  T
Q  317 tcctacaactgcttaccaattcagaaaag 345  Q
    |||| |||||||| ||||  |||||||||    
T  25958664 tcctgcaactgctcaccagctcagaaaag 25958636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 153
Target Start/End: Complemental strand, 27559187 - 27559044
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    ||||| || ||||| ||| |||| || || ||| || ||||||| ||||||||   |||||||||||  ||||||| ||| || |||||| | |||| ||    
T  27559187 ccctcctctttgcaattaaagcacacgatgtcagcatgcttgcagtcagctaatgtgtgacccttcttgccacaccggaaacacttcttcacctcctcag 27559088  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaa 153  Q
     ||||||| |||||||||||||||| |||||||| |||||||||    
T  27559087 gacaaacagtactcttgtggcctttctcaccacaattgaaacaa 27559044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 21764976 - 21765038
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatc 173  Q
    ||||||||| |||||||||||||| |||||||| |||||||| ||||| || | |||||||||    
T  21764976 acaaacattgctcttgtggcctttctcaccacaattgaaacagacaatctccgcaggagcatc 21765038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 320
Target Start/End: Complemental strand, 2871813 - 2871713
Alignment:
Q  220 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 319  Q
    |||||||||||||| ||| ||||   |||||||||||||||||||||  | | |||| |||  | |||||| ||||| || |||||||||||||| ||||    
T  2871813 tcagcaggggcactgtacagcttaggacgactctgttgtcccttgcccttcctctcattcactatcttgtagtgagccttggtatcctcttcatagatcc 2871714  T
Q  320 t 320  Q
    |    
T  2871713 t 2871713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 344
Target Start/End: Complemental strand, 23084769 - 23084709
Alignment:
Q  284 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaa 344  Q
    |||||||||||||||| ||||| || ||||| || ||||||||||| |||| |||||||||    
T  23084769 ccttgtaatgagctttagtatcttcctcatagattctacaactgctcaccagttcagaaaa 23084709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 327
Target Start/End: Original strand, 22437207 - 22437249
Alignment:
Q  285 cttgtaatgagctttcgtatcctcttcataaatcctacaactg 327  Q
    |||||||||||| || |||||||||||||||||||| ||||||    
T  22437207 cttgtaatgagccttggtatcctcttcataaatcctgcaactg 22437249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 22829397 - 22829351
Alignment:
Q  220 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcc 266  Q
    |||||||||||||| ||||||||   |||||||||||||||||||||    
T  22829397 tcagcaggggcactgtacggcttaggacgactctgttgtcccttgcc 22829351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 180; Significance: 4e-97; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 19 - 366
Target Start/End: Complemental strand, 22015881 - 22015534
Alignment:
Q  19 ttgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacat 118  Q
    ||||||||||| || || | ||| ||||||||||||||||||||   ||| || |||||||||||||||||||| |||||||||||  ||  ||||||||    
T  22015881 ttgcagttataacaaacaacatccccacgcttgcaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaaacat 22015782  T
Q  119 tactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgtt 218  Q
    |||| || ||||||||||| ||||||||||| ||||||||||  ||||||||||||||| |||| |||||| |||||||||| | ||| | |||||| ||    
T  22015781 tacttttttggcctttttctccacacttgaatcaaacaatatttgtaggagcatctctcttctttggcctcctctcatcatttattctcttcttaccctt 22015682  T
Q  219 gtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatc 318  Q
    ||||||||| |||||||||||||||  ||||||||| |||||||| || |||||||||||||||||||||||||||||||||||| | |||||||| |||    
T  22015681 gtcagcaggagcactatacggcttcggacgactctgctgtccctttcccctacgctcactcatcaccttgtaatgagctttcgtaacttcttcatagatc 22015582  T
Q  319 ctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    ||||| ||||||||||| ||||| ||||||||||| ||||||||||||    
T  22015581 ctacagctgcttaccaaatcagagaagtttcttattttctgataacca 22015534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 16 - 362
Target Start/End: Original strand, 19857525 - 19857871
Alignment:
Q  16 tcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaa 115  Q
    |||||| ||||||| || || || || || ||||| ||||||||||    ||| || ||||||||||||||||||||||||||||||||  ||  ||| |    
T  19857525 tcattgtagttataacaaacaatgtctccccgcttacaatcagctagtgtgtgtcctttctgaccacacctgaagcatttcttctcatctctatcacaga 19857624  T
Q  116 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttacc 215  Q
    |||||||||||||||||||||||||||||||||| |||||||| || |||| ||||||||||||||| |||||| ||||||||||||| || ||||||||    
T  19857625 cattactcttgtggcctttttcaccacacttgaagcaaacaatctcggtagaagcatctctcctcttaggcctcctctcatcattcaacctctgcttacc 19857724  T
Q  216 gttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataa 315  Q
     ||||||||||| |||||||| || ||   |||||||||||||||||| ||||| || ||||||||||||||||||||||| || ||||||||||||||     
T  19857725 cttgtcagcaggagcactatatggtttaggacgactctgttgtcccttacctctgcgttcactcatcaccttgtaatgagccttagtatcctcttcatag 19857824  T
Q  316 atcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    ||| |||| ||||||||||| |||||||||||||| |||||||||||    
T  19857825 atcttacagctgcttaccaactcagaaaagtttctaatcttctgata 19857871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 43 - 362
Target Start/End: Complemental strand, 21739148 - 21738829
Alignment:
Q  43 ccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccac 142  Q
    |||||||| |||||| ||||   ||| || |||||||||||||| ||||| |||||||||||   |  |||||||||||||||||||||||| |||||||    
T  21739148 ccacgcttacaatcaactaaggtgtgtcctttctgaccacacctaaagcacttcttctcatctcgatcacaaacattactcttgtggcctttctcaccac 21739049  T
Q  143 acttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggctt 242  Q
    ||||||| |||| ||| |||||||||||| |||||||||| |||||| |||||||||||||||| |||||||| ||||||||| |||| ||||| |||||    
T  21739048 acttgaagcaaataatctcagtaggagcacctctcctcttaggcctcctctcatcattcaatctctgcttacccttgtcagcatgggcgctatatggctt 21738949  T
Q  243 ctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaa 342  Q
    |  |||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||| || || |||||||||||||||    
T  21738948 cggacgactctgttgtcccttacctctgcggtcactcatcaccttgtaatgagctttcgtatcctcttcatatatcctgcagctacttaccaattcagaa 21738849  T
Q  343 aagtttcttatcttctgata 362  Q
    || || |||| ||| |||||    
T  21738848 aaattccttaccttttgata 21738829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 16 - 366
Target Start/End: Complemental strand, 21742691 - 21742341
Alignment:
Q  16 tcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagt-acaa 114  Q
    ||||| ||||| ||||| || | ||| ||||||||||||||||| ||   ||| || |||||||||||||| ||||| ||||||||||| |  || |||     
T  21742691 tcattacagttgtagcaaacaacatccccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctcatc-tcggtcacat 21742593  T
Q  115 acattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttac 214  Q
    |||||||||||||||||||| |||||||||||||| |||| ||| ||||||||||||||||||||||| |||||| |||||||||||| ||| |||||||    
T  21742592 acattactcttgtggcctttctcaccacacttgaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagtctctgcttac 21742493  T
Q  215 cgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcata 314  Q
    | ||||||| ||| ||||||||||| |||  ||||||||  |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21742492 ccttgtcagtaggagcactatacggtttcggacgactctactgtcccttacctctgcgctcactcatcaccttgtaatgagctttcgtatcctcttcata 21742393  T
Q  315 aatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
     ||||| || || || ||||| ||||| ||  |||||||||||| |||||||    
T  21742392 tatcctgcagctactcaccaactcagagaaaattcttatcttctcataacca 21742341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 2 - 359
Target Start/End: Complemental strand, 20833053 - 20832697
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    ||||||| || || |||||||||||||| || || | ||| || | ||||||||||||||    ||| || ||||||||||||||||| || ||||||||    
T  20833053 tgatgtgaccttcctcattgcagttataacaaacaacatctcccctcttgcaatcagctagtgtgtgtcctttctgaccacacctgaaacaattcttctc 20832954  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    ||| ||||||||||||||||||||||||||||| || ||||||||| | ||||||||||||  ||||||||||||||||||||| ||| |||||||||||    
T  20832953 atctttagtacaaacattactcttgtggcctttctcgccacacttgtagcaaacaatatcaacaggagcatctctcctcttgggtctcctctcatcattc 20832854  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    |  || ||||| || ||||||||||| ||||||||  | ||   ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  20832853 agcctctgctttcccttgtcagcaggagcactata-tgtttaggacgactctgctgtcccttgcctctacggtcactcatcaccttgtaatgagctttcg 20832755  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctg 359  Q
    |||| | |||||| || ||||| ||||| ||||| |  ||||||||||| || |||||    
T  20832754 tatcttattcatagattctacagctgctcaccaacttcgaaaagtttctaattttctg 20832697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 10 - 362
Target Start/End: Original strand, 21961272 - 21961624
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    |||||| |||||||||| ||||| || ||||| |||||||| || ||||||||   ||| ||||||||||||||||||||||| ||| ||||||| |||     
T  21961272 ccctctccattgcagttgtagcagacaatatccccacgcttacattcagctaaactgtgtcccttctgaccacacctgaagcacttcctctcatctttac 21961371  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatg 209  Q
     ||||||||| ||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||| ||| | ||||||||||   | ||    
T  21961372 cacaaacattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttgggtctcctatcatcattcatcttctg 21961471  T
Q  210 cttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctct 309  Q
    ||| || ||||||| ||| ||||| || |||||   |||| |||| |||||||| ||||| | ||||||||| | ||||||||||||||| || || |||    
T  21961472 ctttcctttgtcagaaggagcactgtaaggcttaggacgattctgctgtcccttacctctcctctcactcattatcttgtaatgagctttggtgtcttct 21961571  T
Q  310 tcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    ||||||||  | || ||| ||||||||||||| |||  ||| |||| ||||||    
T  21961572 tcataaattatgcatctgtttaccaattcagagaagactctgatctgctgata 21961624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 13 - 362
Target Start/End: Complemental strand, 24096757 - 24096408
Alignment:
Q  13 tcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtac 112  Q
    ||||| |||||||| ||||| || || || |||||||| || |||||||    ||| || |||||||||||||| || || ||| |||||||  ||  ||    
T  24096757 tcttcgttgcagttgtagcaaacaatgtccccacgcttacattcagctagtgtgtgtcctttctgaccacacctaaaacacttcctctcatctctaccac 24096658  T
Q  113 aaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgctt 212  Q
    || ||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||| ||||||||||||  || || ||    
T  24096657 aagcattactcttgtggcctttttcaccacacttgaaacaaacaatctcaacaggagcatctctcctcttgggcctcctctcatcattcatcctctgttt 24096558  T
Q  213 accgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttca 312  Q
     || ||||||||||| |||||||| || ||   |||||||||||||||||| | ||| ||||||||| ||||||||||||||||||| || || || |||    
T  24096557 tcctttgtcagcaggagcactataaggtttaggacgactctgttgtcccttacttcttcgctcactcgtcaccttgtaatgagctttggtgtcttcctca 24096458  T
Q  313 taaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    || ||||| || ||||| ||||| ||||| ||  |||| |||||||||||    
T  24096457 tatatcctgcagctgctcaccaactcagagaaaattctaatcttctgata 24096408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 17 - 362
Target Start/End: Complemental strand, 31537135 - 31536790
Alignment:
Q  17 cattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaac 116  Q
    |||||||||| || || || || || ||||||||||| ||||||||   ||||||||||||||||||||||||||||||  | |||||  ||  ||||||    
T  31537135 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcattttctatcatctctaccacaaac 31537036  T
Q  117 attactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccg 216  Q
    ||| |||||||||||||| |||||||||||  |||||||||| |||| ||||||||||||||||||||| ||| | ||||||||||  || ||||| ||     
T  31537035 attgctcttgtggcctttctcaccacacttataacaaacaatctcagaaggagcatctctcctcttgggtctcctatcatcattcatcctctgctttcct 31536936  T
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 316  Q
    ||||||||||| |||||||| |||||   |||| |||| |||||||| || || | ||||||||| | ||||||||||||||| || || ||||||||||    
T  31536935 ttgtcagcaggagcactataaggcttaggacgattctgctgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcataaa 31536836  T
Q  317 tcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    | ||||| ||| ||||||| ||||| |||  ||| |||| ||||||    
T  31536835 ttctacatctgtttaccaactcagagaagactctgatctgctgata 31536790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 323
Target Start/End: Complemental strand, 20074863 - 20074541
Alignment:
Q  1 ttgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttct 100  Q
    ||||| || |||||| |||||||||| ||||| || ||||| ||||||||||| ||||| ||   ||||||||||||||||||||||||||| ||| |||    
T  20074863 ttgatatgaccctctccattgcagttgtagcagacaatatccccacgcttgcattcagccaagctgtgacccttctgaccacacctgaagcacttcctct 20074764  T
Q  101 catccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcatt 200  Q
    |||| ||| |||||||||| |||||||||||||| |||||||||||| |||| ||||| ||||| |||||||||||||||||  ||||| | |||||| |    
T  20074763 catctttactacaaacattgctcttgtggcctttctcaccacacttgtaacacacaatctcagtgggagcatctctcctcttaagcctcctgtcatcact 20074664  T
Q  201 caatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttc 300  Q
    ||   | ||||| || ||||||||||  ||||| || |||||   |||| |||| |||||||| || || | ||||||||| | |||||||||||||||     
T  20074663 catcttctgctttcctttgtcagcagaagcactgtaaggcttaggacgattctgctgtcccttacccctcctctcactcattatcttgtaatgagctttg 20074564  T
Q  301 gtatcctcttcataaatcctaca 323  Q
    || || ||||||||||| |||||    
T  20074563 gtgtcttcttcataaattctaca 20074541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 10 - 362
Target Start/End: Original strand, 52988986 - 52989337
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    |||||| |||||||||| ||||| || || || |||||||| || ||||||||   |||||||||||||||||||||||| || ||| ||||||| |||     
T  52988986 ccctctccattgcagttgtagcagacaatgtccccacgcttacattcagctaaattgtgacccttctgaccacacctgaaacacttcctctcatctttac 52989085  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatg 209  Q
     ||||||||| ||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||| |||||| | ||||||||||   | ||    
T  52989086 cacaaacattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattcatcttctg 52989185  T
Q  210 cttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctct 309  Q
    ||| || ||||||||||| ||||| || |||||   |||| | || |||||||| || || | ||||||||| |  |||||||||||||| || || |||    
T  52989186 ctttcctttgtcagcaggagcactgtaaggcttaggacgattttgctgtcccttacccctcctctcactcatta-tttgtaatgagctttggtgtcttct 52989284  T
Q  310 tcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    |||||||| ||||| ||| | ||||| ||||| |||  ||| |||| ||||||    
T  52989285 tcataaattctacacctgttaaccaactcagagaagactctgatctgctgata 52989337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 17 - 344
Target Start/End: Original strand, 20297635 - 20297962
Alignment:
Q  17 cattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaac 116  Q
    |||||||||| ||||| || || || ||||||||||| |||||||    ||||||||||| ||||||||||||||| ||| ||||||| |||  ||||||    
T  20297635 cattgcagttgtagcagacaatgtccccacgcttgcattcagctaggctgtgacccttctaaccacacctgaagcacttcctctcatctttaccacaaac 20297734  T
Q  117 attactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccg 216  Q
    |||||||||||||| ||| |||||||||||| |||||||||| |||| ||||||||||||||||||||||||| | ||||||  ||   | || || ||     
T  20297735 attactcttgtggcatttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcctcctgtcatcacccatcttctgttttccc 20297834  T
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 316  Q
    ||||||| ||| ||||| || |||||   |||| |||| |||||||| || || | ||||||||| | ||||||||||||||| || || ||||||||||    
T  20297835 ttgtcagtaggagcactgtaaggcttaggacgattctgatgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcataaa 20297934  T
Q  317 tcctacaactgcttaccaattcagaaaa 344  Q
    | ||||| ||| | ||||| ||||||||    
T  20297935 ttctacacctgttaaccaactcagaaaa 20297962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 17 - 362
Target Start/End: Complemental strand, 38909964 - 38909619
Alignment:
Q  17 cattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaac 116  Q
    |||||||||| || || || || || ||||||||||| ||||||||   ||||||||||||||||||||||||||| ||| | |||||  |   ||||||    
T  38909964 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 38909865  T
Q  117 attactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccg 216  Q
    |||||||||||||||||| |||||||||||| | |||||||| |||  ||||||||||||||||||||||||| | ||||||  ||  || ||||| ||     
T  38909864 attactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcctctgctttcct 38909765  T
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 316  Q
    ||||||||||| ||||| || || ||   |||| ||||||||||||| || || | | ||||||| | ||||||||||||||| || || ||||||||||    
T  38909764 ttgtcagcaggagcactgtaaggtttaggacgattctgttgtcccttacccctcctcccactcattatcttgtaatgagctttggtgtcttcttcataaa 38909665  T
Q  317 tcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    | ||||| ||| ||||||| ||||| |||  ||| |||| ||||||    
T  38909664 ttctacatctgtttaccaactcagagaagactctgatctgctgata 38909619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 17 - 314
Target Start/End: Original strand, 48426125 - 48426422
Alignment:
Q  17 cattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaac 116  Q
    |||||||||| || || || || || ||||||||||| ||||||||   ||||||||||||||||||||||||||| ||| | |||||  |   ||||||    
T  48426125 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 48426224  T
Q  117 attactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccg 216  Q
    |||||||||||||||||| |||||||||||| | |||||||| |||  ||||||||||||||||||||||||| | ||||||  ||   | ||||| ||     
T  48426225 attactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcct 48426324  T
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcata 314  Q
    ||||||||||| ||||| || |||||   |||| ||||||||||||| || || | ||||||||| | ||||||||||||||| || || ||||||||    
T  48426325 ttgtcagcaggagcactgtaaggcttaggacgattctgttgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcata 48426422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 43 - 344
Target Start/End: Original strand, 18273045 - 18273346
Alignment:
Q  43 ccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccac 142  Q
    ||||||||||| ||||||| |   || |||||||  ||||| | |||||| |||||||| ||   | | |||||||||||||||||||| || |||||||    
T  18273045 ccacgcttgcattcagctatcgtatgccccttctttccacatcggaagcacttcttctcctcaccaatgcaaacattactcttgtggcccttctcaccac 18273144  T
Q  143 acttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggctt 242  Q
    ||||| |||||||||| ||||||||| ||||||| ||||| || ||| |||||||||||||||| ||||  || |||||| |||| ||||| || |||||    
T  18273145 acttgtaacaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctttgctcccctttgtcaacaggagcactgtagggctt 18273244  T
Q  243 ctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaa 342  Q
    |  |||||  || || ||||||   || ||||||||| | ||||| |||||||| ||||||||||| |||||||| ||||| || || ||||||||||||    
T  18273245 cggacgaccttgctgacccttgttcctccgctcactcctaaccttataatgagccttcgtatcctcctcataaattctacagctactcaccaattcagaa 18273344  T
Q  343 aa 344  Q
    ||    
T  18273345 aa 18273346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 43 - 314
Target Start/End: Original strand, 37680327 - 37680598
Alignment:
Q  43 ccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccac 142  Q
    ||||||||||| ||||||||   ||||||||||||||||||||||||||| ||| | |||||  |   |||||||||||||||||||||||| |||||||    
T  37680327 ccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccac 37680426  T
Q  143 acttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggctt 242  Q
    ||||| | |||||||| |||  ||||| ||||||||||||||||||| | ||||||  ||   | ||||| || ||||||| ||| ||||| || |||||    
T  37680427 acttgtagcaaacaatctcaacaggagtatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagtaggagcactgtaaggctt 37680526  T
Q  243 ctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcata 314  Q
       |||| ||||||||||||| || || | ||||||||| | ||||||||||||||| || || ||||||||    
T  37680527 aggacgattctgttgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcata 37680598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 37 - 362
Target Start/End: Complemental strand, 20853878 - 20853553
Alignment:
Q  37 atatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggccttttt 136  Q
    ||||| ||||||||||| ||||| ||||  |||||||||||||| || ||||| |||||||||||||| |  || ||| |||||||||||||||| ||      
T  20853878 atatctccacgcttgcattcagccaacatatgacccttctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggcccttca 20853779  T
Q  137 caccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactata 236  Q
    ||||||| ||| ||||||||| ||||  |||||||| ||||| ||| |||  | |||||||||||||||| || || || |||| || ||| ||||| ||    
T  20853778 caccacatttgtaacaaacaacatcaacaggagcatttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagtaggagcactgta 20853679  T
Q  237 cggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaat 336  Q
     ||||||   |||||    || |||||    ||   ||| ||||||||||| |||||||| || |||||||| |||||||| ||||| || || ||||||    
T  20853678 gggcttcgggcgactactctgacccttattccttttctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaat 20853579  T
Q  337 tcagaaaagtttcttatcttctgata 362  Q
    || || ||  |||| |||||||||||    
T  20853578 tctgagaaaattctgatcttctgata 20853553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 344
Target Start/End: Original strand, 16379406 - 16379642
Alignment:
Q  108 agtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatcta 207  Q
    ||||||||||||||| ||||||||||| ||||||||     | |||||||| |||| |  | ||||| || |  | |||||| |||||||||| | |||     
T  16379406 agtacaaacattacttttgtggcctttctcaccacaagcatagcaaacaatctcagcaacaacatctttctttctcggcctcctctcatcattaactctc 16379505  T
Q  208 tgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcct 307  Q
    || || || || ||||||| |||||| || |||||   |||||||||||| ||||||||| | |||||| |||  |||||||||||||| || |||||||    
T  16379506 tgtttgcccttatcagcagaggcactgtaaggcttaggacgactctgttgacccttgcctttccgctcattcacaaccttgtaatgagccttagtatcct 16379605  T
Q  308 cttcataaatcctacaactgcttaccaattcagaaaa 344  Q
    | ||||||||||| || ||||| ||||  ||||||||    
T  16379606 cctcataaatcctgcatctgctcaccagctcagaaaa 16379642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 111 - 242
Target Start/End: Complemental strand, 21228600 - 21228469
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgc 210  Q
    |||||||||||||||||||||||| || ||||| |||||||||||||| || | |||||||||  || |||| |||| | | |||||   || ||| ||     
T  21228600 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgcaggagcatccttcttcttaggccgcctatcatcgaccattctctgt 21228501  T
Q  211 ttaccgttgtcagcaggggcactatacggctt 242  Q
    ||||| || ||||||||||||||||| |||||    
T  21228500 ttacccttatcagcaggggcactatagggctt 21228469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 150
Target Start/End: Complemental strand, 22435884 - 22435738
Alignment:
Q  4 atgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcat 103  Q
    ||||| |||||||| ||||| ||  |||| || ||||||| | ||||||||||||||||    ||||||||||  ||||| | ||| ||||||||  | |    
T  22435884 atgtgaccctcttccttgcaattgaagcacacaatatcactatgcttgcaatcagctaatgtatgacccttcttgccacatcggaaacatttctttacct 22435785  T
Q  104 ccttagtacaaacattactcttgtggcctttttcaccacacttgaaa 150  Q
    |||  | ||||||||| |||||||||||||| |||||||| ||||||    
T  22435784 cctctggacaaacattgctcttgtggcctttctcaccacaattgaaa 22435738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 320
Target Start/End: Complemental strand, 16347542 - 16347433
Alignment:
Q  211 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 310  Q
    ||||| |||||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| |||||||||||||    
T  16347542 ttacccttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctctt 16347443  T
Q  311 cataaatcct 320  Q
    | || |||||    
T  16347442 cgtagatcct 16347433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 320
Target Start/End: Complemental strand, 16354190 - 16354081
Alignment:
Q  211 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 310  Q
    ||||| |||||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| |||||||||||||    
T  16354190 ttacccttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctctt 16354091  T
Q  311 cataaatcct 320  Q
    | || |||||    
T  16354090 cgtagatcct 16354081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 220 - 320
Target Start/End: Complemental strand, 51330430 - 51330330
Alignment:
Q  220 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 319  Q
    |||||||||||||| ||||||||   ||||||||| |||||||| ||  | | |||| |||  |||||||| ||||| ||||||||||||||||| ||||    
T  51330430 tcagcaggggcactgtacggcttaggacgactctgctgtcccttacccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcc 51330331  T
Q  320 t 320  Q
    |    
T  51330330 t 51330330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 320
Target Start/End: Original strand, 21833723 - 21833823
Alignment:
Q  220 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 319  Q
    ||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| |||||||||||| |||| ||||    
T  21833723 tcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctctccatagatcc 21833822  T
Q  320 t 320  Q
    |    
T  21833823 t 21833823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 366
Target Start/End: Complemental strand, 21045118 - 21044943
Alignment:
Q  191 tctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgta 290  Q
    |||||||||| | ||| ||||| || || |||||||| ||||| || |||||   |||||| || || ||||||||| | | || | |||  ||||||||    
T  21045118 tctcatcattaactctttgcttgcccttatcagcaggagcactgtaaggctttggacgactttgctgacccttgcctttcctcttattcacaaccttgta 21045019  T
Q  291 atgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    |||||| || ||||| || ||||| || || |||||||| ||||  ||||||||||| |  |||||||| ||||||    
T  21045018 atgagccttagtatcttcctcatatattctgcaactgctcaccagctcagaaaagttacggatcttctgttaacca 21044943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 314
Target Start/End: Complemental strand, 41350615 - 41350512
Alignment:
Q  211 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 310  Q
    ||||| |||||||| |||||||| ||||||||   ||||||||| |||||||| ||  | | |||| |||  |||||||| | ||| |||||||||||||    
T  41350615 ttacccttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttacccttcctctcattcactaccttgtagtaagccttcgtatcctctt 41350516  T
Q  311 cata 314  Q
    ||||    
T  41350515 cata 41350512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 19109791 - 19109837
Alignment:
Q  220 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcc 266  Q
    |||||||||||||| ||||||||   |||||||||||||||||||||    
T  19109791 tcagcaggggcactgtacggcttaggacgactctgttgtcccttgcc 19109837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 24784901 - 24784839
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatc 173  Q
    ||||||||| |||||||||||||| |||||| | |||||||| ||||| || | |||||||||    
T  24784901 acaaacattgctcttgtggcctttctcaccataattgaaacagacaatctccgcaggagcatc 24784839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 242
Target Start/End: Complemental strand, 17042057 - 17041929
Alignment:
Q  113 aaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgctt 212  Q
    ||||||||||||||||||||||  | ||||| |||||||||| ||| || | |||||||||  || |||| |||| | | |||||   || ||| |||||    
T  17042057 aaacattactcttgtggcctttcccgccacagttgaaacaaa-aatctccgaaggagcatccttcttcttaggccgcctatcatcgaccattctctgctt 17041959  T
Q  213 accgttgtcagcaggggcactatacggctt 242  Q
     || || ||||||||||||||||| |||||    
T  17041958 gcccttatcagcaggggcactataaggctt 17041929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 362
Target Start/End: Original strand, 20921929 - 20922005
Alignment:
Q  286 ttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    |||||||| ||||| |||||||||||||| || || |||||||| || | ||||| |||||| |  |||||||||||    
T  20921929 ttgtaatgtgctttggtatcctcttcatagattctgcaactgctcactagttcagtaaagttacggatcttctgata 20922005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 176; Significance: 1e-94; HSPs: 3)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 43 - 362
Target Start/End: Complemental strand, 62815 - 62496
Alignment:
Q  43 ccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccac 142  Q
    |||||||| |||||||||||   |||  | |||||||||||||| ||||| ||||||||||| |    ||| |||||||||||||||||||| |||||||    
T  62815 ccacgcttacaatcagctaaagtgtgtactttctgaccacacctaaagcacttcttctcatcatggtcacatacattactcttgtggcctttctcaccac 62716  T
Q  143 acttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggctt 242  Q
    |||||||  ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  62715 acttgaattaaacaatatcagtaggagcatctctcctcttaggcctcctctcatcattcaatctctgcttacccttgtcagcaggggcactatacggctt 62616  T
Q  243 ctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaa 342  Q
    |  ||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| || || |||||||| |||||     
T  62615 cggacgactctgctgccccttgcctctacgctcactcatcaccttgtaatgagctttggtatcctcttcatatatcctgcagctacttaccaactcagag 62516  T
Q  343 aagtttcttatcttctgata 362  Q
    || || |||||||| |||||    
T  62515 aaattccttatcttttgata 62496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 194 - 366
Target Start/End: Complemental strand, 65214 - 65042
Alignment:
Q  194 catcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatg 293  Q
    ||||||||| ||| ||||| || || ||||||||||||||||| ||||||   |||||||||||||| ||    || | |||||||||||||||||||||    
T  65214 catcattcagtctctgcttgcccttatcagcaggggcactatatggcttcgggcgactctgttgtccattattccttctctcactcatcaccttgtaatg 65115  T
Q  294 agctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    |||||| ||||||||||||||||| || || || || ||||| ||||| || ||||| || ||||||||||||    
T  65114 agcttttgtatcctcttcataaattctgcagctactcaccaactcagagaaatttctgattttctgataacca 65042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 73 - 173
Target Start/End: Complemental strand, 65311 - 65211
Alignment:
Q  73 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcat 172  Q
    |||||||||||||||||||| || |||||||| || |||||||||||||||||||||||||| || ||||||||| |||||||||  |||| ||||||||    
T  65311 ttctgaccacacctgaagcactttttctcatctttggtacaaacattactcttgtggcctttctcgccacacttgtaacaaacaacctcagcaggagcat 65212  T
Q  173 c 173  Q
    |    
T  65211 c 65211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 176; Significance: 1e-94; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 19 - 362
Target Start/End: Original strand, 6042 - 6384
Alignment:
Q  19 ttgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacat 118  Q
    ||||||||||| || || || || |||||||||||||||||||    ||| || ||||||||||| |||||||| |||||||||||  ||  ||| ||||    
T  6042 ttgcagttataacaaacaatgtccccacgcttgcaatcagctagtgtgtgtcctttctgaccacatctgaagcacttcttctcatctctatcacagacat 6141  T
Q  119 tactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgtt 218  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||| |||||||||| || || |||||||| ||    
T  6142 tactcttgtggcctttttcaccacacttgaagcaaacaatgtcagtaagagcatctctcctcttgggcctcctctcatcatttaacct-tgcttaccctt 6240  T
Q  219 gtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatc 318  Q
    ||||| ||| |||||||||||||||  ||||||||| |||||||||||||| || ||||||||||||||||||||||||||||| ||||| |||||||||    
T  6241 gtcagtaggagcactatacggcttcggacgactctgctgtcccttgcctctgcgttcactcatcaccttgtaatgagctttcgtgtcctcctcataaatc 6340  T
Q  319 ctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    ||||| |||||| |||||||| | ||||| ||||| ||||||||    
T  6341 ctacagctgcttcccaattcaaagaagttccttattttctgata 6384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 175; Significance: 4e-94; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 16 - 366
Target Start/End: Original strand, 34571 - 34921
Alignment:
Q  16 tcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaa 115  Q
    |||||||||||||| || || |  || |||||||| |||||| ||||   ||| || |||| ||||||||||||||| |||||||||||  ||  ||| |    
T  34571 tcattgcagttataacaaacaacgtccccacgcttacaatcaactaatgtgtgtcctttctaaccacacctgaagcacttcttctcatctctatcacaga 34670  T
Q  116 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttacc 215  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| || || ||||||||    
T  34671 cattactcttgtggcctttctcaccacacttgaaacaaacaatgtcagtaggagcatctctcctcttgggcctcctctcatcatttaacctttgcttacc 34770  T
Q  216 gttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataa 315  Q
     ||||||||||| ||||||||| |||||  ||||||||| |||||||||||||| || |||||||||||||||||||||||||| || ||||| ||||||    
T  34771 cttgtcagcaggagcactatacagcttcggacgactctgctgtcccttgcctctgcgttcactcatcaccttgtaatgagcttttgtgtcctcctcataa 34870  T
Q  316 atcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    ||||| || || |||||||| ||||| ||||||||||| |||| |||||||    
T  34871 atcctgcagctacttaccaaatcagagaagtttcttattttctaataacca 34921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2062 (Bit Score: 173; Significance: 6e-93; HSPs: 1)
Name: scaffold2062
Description:

Target: scaffold2062; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 2 - 362
Target Start/End: Complemental strand, 956 - 596
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    ||||||| || || || |||||||||||||| || || ||||||||||| ||||||||||    ||| || |||||||||||| ||||||| ||||||||    
T  956 tgatgtgaccttcctcgttgcagttatagcaaacaatgtcaccacgcttacaatcagctagtgtgtgtcctttctgaccacacatgaagcacttcttctc 857  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    |||  ||  ||| ||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||| |||||||||||    
T  856 atctctatcacagacattactcttgtggcctttttcaccacacttgaagcaaacaatatccataggagcatctctcctcttgggcctcctctcatcattc 757  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    | ||  |||||||| ||||||||||| | |||||| ||||||  |||||||||||||||||| |||||||  |||||||||||||||||||||| |||||    
T  756 agtcgctgcttacccttgtcagcaggagtactatatggcttcggacgactctgttgtcccttacctctacattcactcatcaccttgtaatgagatttcg 657  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    | ||||| |||||||||||||| ||| ||||||||| ||| ||||| |||||  |||||||    
T  656 tgtcctcctcataaatcctacagctggttaccaatttagagaagttccttattctctgata 596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 173; Significance: 6e-93; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 10 - 362
Target Start/End: Original strand, 7266 - 7618
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    ||||||||||   ||||||| || || | |||||||||||||||||||||||    ||| || |||||||||||||||||||| ||||||||||| ||||    
T  7266 ccctcttcatcatagttataacaaacaacatcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctttag 7365  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatg 209  Q
    ||||||||||||||||||||||||| || ||||||||| |||||||||| |||| ||||||||||||||| ||||||||| ||||||||||||| || ||    
T  7366 tacaaacattactcttgtggcctttctcgccacacttgtaacaaacaatctcagcaggagcatctctcctattgggcctcctctcatcattcaacctctg 7465  T
Q  210 cttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctct 309  Q
    |||||| |||||| |||| |||||||||||||||  ||||||||| ||||| ||||  || || ||||||||||||||||||||||||||||| |||||     
T  7466 cttacccttgtcaacaggagcactatacggcttcggacgactctgctgtcctttgctccttcgatcactcatcaccttgtaatgagctttcgtgtcctcc 7565  T
Q  310 tcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    ||||| || || || || |||||||||||||| ||||| || |||||||||||    
T  7566 tcatagattctgcagctacttaccaattcagagaagttcctgatcttctgata 7618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 173; Significance: 6e-93; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 2 - 362
Target Start/End: Complemental strand, 8546 - 8186
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    |||| ||||||| ||||||||||||||| || || |  ||||||||||||||||||||||    ||| |||||||||||||||||||| || ||||||||    
T  8546 tgatatggccctattcattgcagttataacaaacaacgtcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaaacacttcttctc 8447  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    |||||||||||||||||||||||||||||| || || ||||||||  ||||||||||||||  | ||||||||||||||||||| ||| |||||||||||    
T  8446 atccttagtacaaacattactcttgtggccattctcgccacacttataacaaacaatatcaacatgagcatctctcctcttgggtctcctctcatcattc 8347  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    |  || ||||| || ||||||||||| |||||||||||||||  ||||||||||||||||||||| || || |||||||||||||||||||||||||||     
T  8346 agcctctgctttcccttgtcagcaggagcactatacggcttcggacgactctgttgtcccttgcccctgcggtcactcatcaccttgtaatgagctttca 8247  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    | ||||| ||||| || || || |  |||||||||||||| |||||| | |||||||||||    
T  8246 tgtcctcctcatagattctgcagcaacttaccaattcagagaagtttttgatcttctgata 8186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 2 - 362
Target Start/End: Complemental strand, 18760 - 18400
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    |||| ||||||| ||||||||||||||| || || |  ||||||||||||||||||||||    ||| |||||||||||||||||||| || ||||||||    
T  18760 tgatatggccctattcattgcagttataacaaacaacgtcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaaacacttcttctc 18661  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    |||||||||||||||||||||||||||||| || || ||||||||  ||||||||||||||  | ||||||||||||||||||| ||| |||||||||||    
T  18660 atccttagtacaaacattactcttgtggccattctcgccacacttataacaaacaatatcaacatgagcatctctcctcttgggtctcctctcatcattc 18561  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    |  || ||||| || ||||||||||| |||||||||||||||  ||||||||||||||||||||| || || |||||||||||||||||||||||||||     
T  18560 agcctctgctttcccttgtcagcaggagcactatacggcttcggacgactctgttgtcccttgcccctgcggtcactcatcaccttgtaatgagctttca 18461  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    | ||||| ||||| || || || |  |||||||||||||| |||||| | |||||||||||    
T  18460 tgtcctcctcatagattctgcagcaacttaccaattcagagaagtttttgatcttctgata 18400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 19 - 366
Target Start/End: Complemental strand, 882 - 535
Alignment:
Q  19 ttgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacat 118  Q
    ||||||||||| || || || || |||||||| ||||||||||    ||| ||||||||||||||||||||||| |||||||||||  ||  ||||||||    
T  882 ttgcagttataacaaacaatgtccccacgcttacaatcagctagtgtgtgtcccttctgaccacacctgaagcacttcttctcatctctatcacaaacat 783  T
Q  119 tactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgtt 218  Q
    ||||||||||||||||||||||||||||||| ||| |||| || ||||||||||||||||||||||||||| |||||||||| || || ||||| || ||    
T  782 tactcttgtggcctttttcaccacacttgaagcaatcaatgtccgtaggagcatctctcctcttgggcctcctctcatcatttaacctctgcttcccctt 683  T
Q  219 gtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatc 318  Q
    ||| ||||| |||||||||||||||  |||||| || ||||||||||||||| | |||||||||||||||||||||||||| ||||| || ||| |||||    
T  682 gtcggcaggagcactatacggcttcggacgactttgctgtcccttgcctctatgttcactcatcaccttgtaatgagctttggtatcttcctcagaaatc 583  T
Q  319 ctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    || || || |||||||| ||||| ||||||||||| ||||||||||||    
T  582 ctgcagctacttaccaaatcagagaagtttcttattttctgataacca 535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 16 - 355
Target Start/End: Original strand, 16871 - 17210
Alignment:
Q  16 tcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaa 115  Q
    ||||| ||||| ||||| || ||||| ||||||||||||||||| ||   ||| || |||||||||||||| ||||| |||||||||||   |  ||| |    
T  16871 tcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctcatctcgatcacaca 16970  T
Q  116 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttacc 215  Q
    ||||||||||||||||||| || |||||||||||||||| ||| ||||||||||||||||||||||| |||||| |||||||||||| | | ||||||||    
T  16971 cattactcttgtggcctttctctccacacttgaaacaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagtttctgcttacc 17070  T
Q  216 gttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataa 315  Q
     ||||| ||||| |||||||||||||||  |||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||| |||||||||     
T  17071 cttgtcggcaggagcactatacggcttcggacgactctgttgtcccttgcctttgcgctcactcatcaccttgtaatgagctttggtattctcttcatat 17170  T
Q  316 atcctacaactgcttaccaattcagaaaagtttcttatct 355  Q
    || ||||| |||||||||||||||||||| || |||||||    
T  17171 attctacatctgcttaccaattcagaaaaattccttatct 17210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 94 - 366
Target Start/End: Original strand, 115936 - 116208
Alignment:
Q  94 ttcttctcatccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttct 193  Q
    |||||||||||  ||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||| |||    
T  115936 ttcttctcatctctatcacaaacattactcttgtggcctttttcaccacacatgaaacaaacaatatcagtaggagcatccctcctcttaggcctcctct 116035  T
Q  194 catcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatg 293  Q
    ||||||||| ||| | |||||| ||||||||||| |||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  116036 catcattcagtctcttcttacccttgtcagcaggagcactatacggcttcggacgactctgctgtcccttgcctctacgctcactcatcaccttgtaatg 116135  T
Q  294 agctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    |||||||  ||| |||||| | |||||||| ||||||||||| ||||| || |||||||| ||||||||||||    
T  116136 agctttcaaatcttcttcacagatcctacagctgcttaccaaatcagagaaatttcttattttctgataacca 116208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 168; Significance: 6e-90; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 2 - 341
Target Start/End: Complemental strand, 6341 - 6002
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    |||||||||||| ||| || || ||||||||||| ||||| |||||||| |||||||||| || ||||||||||||||||||||||||||| ||||||||    
T  6341 tgatgtggccctattcgttacaattatagcatacaatatcgccacgcttacaatcagctagcacgtgacccttctgaccacacctgaagcacttcttctc 6242  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    |||||| |||||||| ||||||||||||||||| || |||||||| |||||||| || ||   ||||||||||||||| || |||||| |||||||||||    
T  6241 atccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcgacaggagcatctctcctattcggcctcctctcatcattc 6142  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    | ||| |||||||| ||||||||||||||||| ||||||||   |||||||||||||||||| ||||| || ||||||||||| || ||||||||||| |    
T  6141 agtctttgcttacccttgtcagcaggggcactgtacggcttaggacgactctgttgtcccttacctcttcgttcactcatcactttataatgagctttgg 6042  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcaga 341  Q
    | ||||| ||||||||||| |||   |||||||| |||||    
T  6041 tgtcctcctcataaatcctgcaatgacttaccaaatcaga 6002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 168; Significance: 6e-90; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 23 - 366
Target Start/End: Complemental strand, 63582 - 63259
Alignment:
Q  23 agttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagt-acaaacattac 121  Q
    |||| ||||| || ||||| ||| |||| |||||||||||   ||| || ||||||||||||||||| || ||||||||||| |  || |||||||||||    
T  63582 agttgtagcaaacaatatccccatgcttacaatcagctaaagtgtgtcctttctgaccacacctgaaacacttcttctcatc-tcggtcacaaacattac 63484  T
Q  122 tcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtc 221  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||    
T  63483 tcttgtggcctttatcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattcaatctttgcttacccttgtc 63384  T
Q  222 agcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatccta 321  Q
    ||||||                    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  63383 agcagg--------------------gactctgctgtaccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatccta 63304  T
Q  322 caactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    || || ||||||||||||||||||||||||||||||| |||||||    
T  63303 cagctacttaccaattcagaaaagtttcttatcttctcataacca 63259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 168; Significance: 6e-90; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 2 - 341
Target Start/End: Original strand, 263446 - 263785
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    |||| ||||||||||| || |||||||| ||||| | |||||||  ||||||||| ||||| | ||||||||||||||||||||||||||| ||||||||    
T  263446 tgatatggccctcttcgttacagttataacatacaacatcaccatccttgcaatccgctaaaaggtgacccttctgaccacacctgaagcacttcttctc 263545  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    |||||| |||||||||||||||||||||||||| || |||||||| |||||||| || |||| |||||||||||||||   ||||||| |||||||||||    
T  263546 atccttggtacaaacattactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcctaacgggcctcctctcatcattc 263645  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    | ||| |||||||| ||||||||||||||||| ||||||||   ||||||||| |||||||| ||||| ||||||||||||||||| |||||| |||| |    
T  263646 agtctctgcttacccttgtcagcaggggcactgtacggcttaagacgactctgctgtcccttacctcttcgctcactcatcaccttataatgaactttgg 263745  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcaga 341  Q
    | ||||| ||||| ||||| ||||  |||||||| |||||    
T  263746 tgtcctcctcatagatcctgcaacgacttaccaaatcaga 263785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 168; Significance: 6e-90; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 2 - 341
Target Start/End: Original strand, 203601 - 203940
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    |||| ||||||||||| || |||||||| ||||| | |||||||  ||||||||| ||||| | ||||||||||||||||||||||||||| ||||||||    
T  203601 tgatatggccctcttcgttacagttataacatacaacatcaccatccttgcaatccgctaaaaggtgacccttctgaccacacctgaagcacttcttctc 203700  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    |||||| |||||||||||||||||||||||||| || |||||||| |||||||| || |||  |||||||||||||||   ||||||| |||||||||||    
T  203701 atccttggtacaaacattactcttgtggcctttctcgccacacttaaaacaaactatctcaccaggagcatctctcctaacgggcctcctctcatcattc 203800  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    | ||| |||||||| ||||||||||||||||| ||||||||   ||||||||| |||||||| ||||| ||||||||||||||||| ||||||||||| |    
T  203801 agtctctgcttacccttgtcagcaggggcactgtacggcttaggacgactctgctgtcccttacctcttcgctcactcatcaccttataatgagctttgg 203900  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcaga 341  Q
    | ||||| ||||| ||||| ||||  |||||||| |||||    
T  203901 tgtcctcctcatagatcctgcaacgacttaccaaatcaga 203940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 314
Target Start/End: Original strand, 424528 - 424840
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    ||||||| |||||||||||||||||| | || || || ||  ||||||||||||||||||  |  ||||||||||  ||||| | ||  ||||||||       
T  424528 tgatgtgaccctcttcattgcagttaaaacacacaatgtcctcacgcttgcaatcagctacaatatgacccttcttgccacatcggacacatttcttaat 424627  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
     || | || ||||||||| || |||||||||||  ||||||| ||||| || ||||| |||||||||||| |  || || | |||| | | |||||   |    
T  424628 ctcttcaggacaaacattgcttttgtggcctttcacaccacagttgaagcacacaatctcagtaggagcacccttcttcgtaggccgcctatcatcgacc 424727  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    |   | || || || || |||||||||||| | ||||||||   |||||| || |||||||||||  | |||||| ||| || |||||||||||| || |    
T  424728 atattttgtttccctttatcagcaggggcattgtacggcttaggacgactatgctgtcccttgcccttccgctcattcaccatcttgtaatgagccttgg 424827  T
Q  302 tatcctcttcata 314  Q
    ||||||| |||||    
T  424828 tatcctcctcata 424840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 166; Significance: 9e-89; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 2 - 335
Target Start/End: Complemental strand, 9871 - 9538
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    |||| |||| |||||| ||||||||||| ||||| | |||||||||||||||||| ||||| | ||||||||||| ||||||||||||||| ||||||||    
T  9871 tgatatggcactcttcgttgcagttataacatacaacatcaccacgcttgcaatccgctaaaaggtgacccttctaaccacacctgaagcacttcttctc 9772  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    |||||| |||||||||||||||||||||||||| || |||||||| |||||||| || |||| |||||||||||||||   ||||||| ||||||||||     
T  9771 atccttggtacaaacattactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcctaacgggcctcctctcatcatta 9672  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    | |||  ||||||| || |||||||||||||| ||||||||   |||||||||||||||||| ||||| ||||||||||||||||| ||||||||||| |    
T  9671 agtctcagcttacccttatcagcaggggcactgtacggcttaggacgactctgttgtcccttacctcttcgctcactcatcaccttataatgagctttgg 9572  T
Q  302 tatcctcttcataaatcctacaactgcttaccaa 335  Q
    | ||||| ||||| ||||| ||||  ||||||||    
T  9571 tgtcctcctcatagatcctgcaacgacttaccaa 9538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 165; Significance: 3e-88; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 2 - 362
Target Start/End: Complemental strand, 571 - 211
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    |||| |||||||||||||||||||||||||| || | |||||||||||||||||||||||    ||| || ||||||||||||||||| || ||||||||    
T  571 tgatatggccctcttcattgcagttatagcaaacaacatcaccacgcttgcaatcagctaggctgtgtcctttctgaccacacctgaaacacttcttctc 472  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    |||||| |||||||||| |||||||||||||||    ||||| ||| ||||||| || |||| ||||||||||||||| ||||||||| |||||||||||    
T  471 atccttggtacaaacatcactcttgtggcctttcctgccacatttgtaacaaacgatctcagcaggagcatctctcctattgggcctcctctcatcattc 372  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    ||| | ||||| || ||||||||||||||||| ||||||||     |||||||||||||||| ||||| || |||||||||||||| ||||||||||| |    
T  371 aatatctgctttcccttgtcagcaggggcactgtacggcttagggtgactctgttgtcccttacctcttcgttcactcatcaccttataatgagctttgg 272  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    | ||||| || || ||||||||||| || ||||| ||||| ||| ||||||||||||||||    
T  271 tgtcctcctcgtagatcctacaactactcaccaaatcagagaagattcttatcttctgata 211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 8 - 362
Target Start/End: Original strand, 21040 - 21394
Alignment:
Q  8 ggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatcctt 107  Q
    ||||||| ||||||||||||||||| | ||| || || ||||| |||||| ||||   ||| |||||||| |||||||||||||| ||||||||| | ||    
T  21040 ggccctcctcattgcagttatagcaaattatgtctccccgcttacaatcaactaatgtgtgtcccttctgtccacacctgaagcacttcttctcaccttt 21139  T
Q  108 agtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatcta 207  Q
    ||||||||||||||||||||||||||| |||||||||||| | |||||||| |||| || |||||||||||||||||||||| ||||||||||||  ||     
T  21140 agtacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcagaagcatctctcctcttgggcctcctctcatcattcagcctc 21239  T
Q  208 tgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcct 307  Q
    || || || ||||||||||||||||||||||| ||   ||||||||  |||||||||||| |||||||||||||||||||||||||||||||| |||| |    
T  21240 tgttttcctttgtcagcaggggcactatacggtttaggacgactctactgtcccttgcctttacgctcactcatcaccttgtaatgagctttcctatctt 21339  T
Q  308 cttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    | ||||| || || || || || ||||| || || || |||||||||||||||||    
T  21340 cctcatatattctgcagctactcaccaactcggagaaatttcttatcttctgata 21394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 16 - 366
Target Start/End: Original strand, 70342 - 70692
Alignment:
Q  16 tcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagt-acaa 114  Q
    ||||| ||||| ||||| || ||||| ||||||||||||||||| ||   ||| || ||||| ||||| ||||| || ||||||||||| |  || |||     
T  70342 tcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtcctttctgtccacatctgaaacacttcttctcatc-tcggtcacac 70440  T
Q  115 acattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttac 214  Q
    |||||||||||||||||||| ||||||||||| || |||| ||| ||||||||||||||||||||||| |||||| ||||||||||||  || || ||||    
T  70441 acattactcttgtggcctttctcaccacacttaaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagcctctgtttac 70540  T
Q  215 cgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcata 314  Q
    | ||||||||||| ||||||||||| |||  |||||||||||||||||| ||||| |||||||||||||| || ||||||||||| ||||||||||||||    
T  70541 ctttgtcagcaggagcactatacggtttcggacgactctgttgtcccttacctctgcgctcactcatcactttataatgagctttggtatcctcttcata 70640  T
Q  315 aatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
     || ||||| |||||||||||||||||||| |||||||||||||||||||||    
T  70641 gattctacagctgcttaccaattcagaaaaatttcttatcttctgataacca 70692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 164; Significance: 1e-87; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 111 - 362
Target Start/End: Complemental strand, 21870432 - 21870181
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgc 210  Q
    ||||||||||||||||||| |||| |||||||||||||| ||||  || ||||||||||||||||||||||| |||||| || ||||||||||| | |||    
T  21870432 acaaacattactcttgtggtctttctcaccacacttgaagcaaattatctcagtaggagcatctctcctcttaggcctcctcccatcattcaatttctgc 21870333  T
Q  211 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 310  Q
    ||||| |||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21870332 ttacccttgtcagcaggggcactatacggcttcggacgactctgctgtcccttgcctctacgctcactcatcaccttgtaatgagctttggtatcctctt 21870233  T
Q  311 cataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    |||| ||||| || || |||||||||||||||||||| |||||||| |||||    
T  21870232 catatatcctgcagctacttaccaattcagaaaagttccttatcttttgata 21870181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 111 - 362
Target Start/End: Complemental strand, 21874712 - 21874461
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgc 210  Q
    ||||||||||||||||||| |||| |||||||||||||| ||||  || ||||||||||||||||||||||| |||||| || ||||||||||| | |||    
T  21874712 acaaacattactcttgtggtctttctcaccacacttgaagcaaattatctcagtaggagcatctctcctcttaggcctcctcccatcattcaatttctgc 21874613  T
Q  211 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 310  Q
    ||||| |||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21874612 ttacccttgtcagcaggggcactatacggcttcggacgactctgctgtcccttgcctctacgctcactcatcaccttgtaatgagctttggtatcctctt 21874513  T
Q  311 cataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    |||| ||||| || || |||||||||||||||||||| |||||||| |||||    
T  21874512 catatatcctgcagctacttaccaattcagaaaagttccttatcttttgata 21874461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 73 - 366
Target Start/End: Complemental strand, 23563360 - 23563067
Alignment:
Q  73 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcat 172  Q
    |||||||||||||||||||| |||||||||||  ||  ||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  23563360 ttctgaccacacctgaagcacttcttctcatctctatcacagacattactcttgtggcctttttcaccacacttgaagcaaacaatgtcagtaggagcat 23563261  T
Q  173 ctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacg 272  Q
    ||||||||||||||||| |||||| ||| || || |||||| | || |||||||| |||||||||||||||  || |||||  |||||||| ||||||||    
T  23563260 ctctcctcttgggcctcctctcattatttaacctctgcttatccttttcagcaggagcactatacggcttcggacaactcttctgtcccttacctctacg 23563161  T
Q  273 ctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
     |||||||||| ||||||||||||||| || ||||| ||||||||||| || || |||||||| | | | || ||||| |||||||||||||||    
T  23563160 ttcactcatcatcttgtaatgagctttagtgtcctcctcataaatcctgcagctacttaccaaattaaagaaatttctaatcttctgataacca 23563067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 2 - 341
Target Start/End: Complemental strand, 17266597 - 17266258
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    ||||||| ||||||||||| || ||||||||||| | |||||| ||||||||||| |||| || |||||||||||| |||||||||||||| ||||||||    
T  17266597 tgatgtgaccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcatgtgacccttctgtccacacctgaagcacttcttctc 17266498  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    |||||  |||||||| ||||||||||| ||||| || |||||||| ||||| || || |||| ||||||||| ||| |  | |||||| ||||||||||     
T  17266497 atcctcggtacaaacgttactcttgtgacctttctcgccacacttaaaacacactatctcagcaggagcatccctcttactcggcctcctctcatcatta 17266398  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    | ||| |||||||| ||||||||||||||||||||||| ||   ||||||||| || || || ||||| ||||||||||||||||| ||||||||||| |    
T  17266397 agtctctgcttacccttgtcagcaggggcactatacggtttaggacgactctgatgccctttacctcttcgctcactcatcaccttataatgagctttgg 17266298  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcaga 341  Q
    | ||||| || || |||||||| |  |||||||| |||||    
T  17266297 tgtcctcctcgtagatcctacagcgacttaccaaatcaga 17266258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 13 - 362
Target Start/End: Complemental strand, 23078157 - 23077808
Alignment:
Q  13 tcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtac 112  Q
    ||||| |||||||| ||||| || || || |||||||| || |||||||    ||| || ||||||||||||||||| |||||| |||||||  ||  ||    
T  23078157 tcttcgttgcagttgtagcaaacaatgtctccacgcttacattcagctagggtgtgtcctttctgaccacacctgaaacatttcctctcatctctaccac 23078058  T
Q  113 aaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgctt 212  Q
    || |||| || ||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||| | ||||||||||   | |||||    
T  23078057 aagcattgcttttgtggcctttttcaccacacttgaaacatacaatctcagcaggagcatctctcctcttgggcctcctatcatcattcatcttctgctt 23077958  T
Q  213 accgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttca 312  Q
     || ||||||||||| ||||| || || ||   ||||||||| |||||||| || || | ||||||||| ||||||||||||||||| || || || |||    
T  23077957 ccctttgtcagcaggagcactgtaaggtttaggacgactctgctgtcccttacccctcctctcactcattaccttgtaatgagctttggtgtcttcctca 23077858  T
Q  313 taaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    || ||||| || ||||||||||| ||||| ||  |||| |||||||||||    
T  23077857 tatatcctgcagctgcttaccaactcagagaaaattctaatcttctgata 23077808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 2 - 317
Target Start/End: Original strand, 22505784 - 22506099
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    ||||||| |||||| |||||||||| ||||| || || || |||||||| || ||||||||    || ||| ||||||||||||||||||| ||| ||||    
T  22505784 tgatgtgaccctctccattgcagttgtagcagacaatgtccccacgcttacattcagctaagctatgtcccatctgaccacacctgaagcacttcctctc 22505883  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
     || |||  ||||||||| |||||||||||||| |||||||||||| |||||||||| |||| |||||||||||||||||| |||||| | |||||||||    
T  22505884 gtctttaccacaaacattgctcttgtggcctttctcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattc 22505983  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    |   | ||||| || ||||||||||| ||||| || |||||   |||| |||| |||||||| || || | ||||||||| | ||| ||||||||||| |    
T  22505984 atcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgctgtcccttacccctcctctcactcattatcttataatgagctttgg 22506083  T
Q  302 tatcctcttcataaat 317  Q
    | || |||||||||||    
T  22506084 tgtcttcttcataaat 22506099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 17 - 362
Target Start/End: Original strand, 20345402 - 20345747
Alignment:
Q  17 cattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaac 116  Q
    |||||||||| ||||| || || || ||||||||||| ||| |||    ||||||||||||||||||||||||||| ||| | ||||| |||  ||||||    
T  20345402 cattgcagttgtagcagacaatgtccccacgcttgcattcaactagactgtgacccttctgaccacacctgaagcacttcctatcatctttaccacaaac 20345501  T
Q  117 attactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccg 216  Q
    ||||||||||||| |||| |||||||||||| |||||||||| |||| ||||||||||||||||||||||||| | ||||||  ||   | ||||| ||     
T  20345502 attactcttgtgggctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcct 20345601  T
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 316  Q
    ||||||||||| |||||||| |||||   |||| |||  |||||||| || || | ||||||||| | ||||||||||||||| || || || |||||||    
T  20345602 ttgtcagcaggagcactataaggcttaggacgattctactgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcctcataaa 20345701  T
Q  317 tcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    | || || ||  | ||||| |||||||||  ||| |||| ||||||    
T  20345702 ttctgcacctattaaccaactcagaaaagactctgatctgctgata 20345747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 10 - 317
Target Start/End: Original strand, 25851185 - 25851492
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    |||||| |||||||||| ||||| || || || ||||||||| | |||||||    ||||||||||||||||||||||||||| ||| | ||||| |||     
T  25851185 ccctctccattgcagttgtagcagacaatgtctccacgcttgtattcagctagactgtgacccttctgaccacacctgaagcacttcctatcatctttac 25851284  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatg 209  Q
     |||||||||||||||||||||||| |||||||||||| | |||||||| |||  | ||||||||||||||||||||||| | ||||||  ||   | ||    
T  25851285 cacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaagagcatctctcctcttgggcctcctatcatcacccatcttctg 25851384  T
Q  210 cttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctct 309  Q
    ||| || ||||||||||| ||||| || |||||   |||| |||| |||||||| || || | ||||||||| | ||||||||||||||| || || |||    
T  25851385 ctttcctttgtcagcaggagcactgtaaggcttaggacgattctgctgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttct 25851484  T
Q  310 tcataaat 317  Q
    ||||||||    
T  25851485 tcataaat 25851492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 37 - 356
Target Start/End: Original strand, 23669772 - 23670091
Alignment:
Q  37 atatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggccttttt 136  Q
    ||||||||||||||||| ||||||| |   || |||||||  ||||| | |||||| |||||||| ||   | | ||||||||||||||||||||||| |    
T  23669772 atatcaccacgcttgcattcagctatcgtatgccccttctttccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtggcctttct 23669871  T
Q  137 caccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactata 236  Q
    ||||||||| | |  ||||||| |||| |||||||||||||||||| || ||| |||||||||||||||| ||||  || |||||| |||| ||||| ||    
T  23669872 caccacactggtaggaaacaatctcagcaggagcatctctcctcttaggtctcctctcatcattcaatctttgctctcctttgtcaacaggagcactgta 23669971  T
Q  237 cggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaat 336  Q
     ||||||   ||||  ||||| ||||||   || |||||| || |  |||| || ||||||||||||||||| || ||||||||||| ||||| ||||||    
T  23669972 gggcttcggtcgaccttgttgacccttgttcctccgctcattcctagccttatagtgagctttcgtatcctcctcgtaaatcctacagctgctcaccaat 23670071  T
Q  337 tcagaaaagtttcttatctt 356  Q
    |||||||| |||||||||||    
T  23670072 tcagaaaaatttcttatctt 23670091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 314
Target Start/End: Complemental strand, 14884239 - 14883942
Alignment:
Q  17 cattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaac 116  Q
    |||||||||| || || || || || ||||||||||| ||||| ||   ||||||||||||||||||||||||||| ||| | |||||  |   ||| ||    
T  14884239 cattgcagttgtaacagacaatgtccccacgcttgcattcagccaaactgtgacccttctgaccacacctgaagcacttcctatcatctctcccacagac 14884140  T
Q  117 attactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccg 216  Q
    |||||||||||||||||| |||||||||||| |||||||||| ||||  |||||||||||||||||||||||| | ||||||  ||  || ||||| ||     
T  14884139 attactcttgtggcctttctcaccacacttgtaacaaacaatctcagctggagcatctctcctcttgggcctcctatcatcacccatcctctgctttcct 14884040  T
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcata 314  Q
    ||||||| ||| ||||| || |||||   |||| ||||||||||||| || || | ||||||||| | ||| ||||||||||| || || ||||||||    
T  14884039 ttgtcagtaggagcactgtaaggcttaggacgattctgttgtcccttacccctcctctcactcataatcttataatgagctttggtgtcttcttcata 14883942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 114 - 366
Target Start/End: Complemental strand, 21983328 - 21983076
Alignment:
Q  114 aacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgctta 213  Q
    |||||||||||||||||| || ||||||||| |  | |||||||| |||| |||| ||||||| ||||| || ||| |||||||||||||||| |||||     
T  21983328 aacattactcttgtggcccttctcaccacacctatagcaaacaatctcagcaggaacatctcttctcttaggtctcctctcatcattcaatctttgcttc 21983229  T
Q  214 ccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcat 313  Q
    || |||||||||||  |||| || ||||||  |||||  || || || |||   || ||||||||||| | ||| |||||||||||||||||||| ||||    
T  21983228 cctttgtcagcaggaacactgtagggcttcggacgaccttgctgacctttgttcctccgctcactcataaacttataatgagctttcgtatcctcctcat 21983129  T
Q  314 aaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    |||| ||||| ||||| || ||||||||||| ||||| ||||| |||||||||    
T  21983128 aaattctacagctgctcacaaattcagaaaattttctgatcttttgataacca 21983076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 114 - 366
Target Start/End: Complemental strand, 21561176 - 21560924
Alignment:
Q  114 aacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgctta 213  Q
    |||||||||||||||||| || | |||||||||||| |||||||| |||| |||| ||||||| ||||| || ||| |||||||||||||||| || ||     
T  21561176 aacattactcttgtggcccttcttaccacacttgaagcaaacaatctcagcaggaacatctcttctcttaggtctcctctcatcattcaatctttgtttc 21561077  T
Q  214 ccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcat 313  Q
    || ||||||||||  ||||| || ||||||  |||||  || || || |||   || | ||||||||| ||||| ||| | |||||||||||||| ||||    
T  21561076 cctttgtcagcagtagcactgtagggcttcggacgaccttgctgacctttgttcctcctctcactcataaccttataacgggctttcgtatcctcctcat 21560977  T
Q  314 aaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    |||| ||||| ||||| ||||||| |||||| |  || ||||| |||||||||    
T  21560976 aaattctacagctgctcaccaatttagaaaattacctgatcttttgataacca 21560924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 37 - 356
Target Start/End: Original strand, 43122607 - 43122926
Alignment:
Q  37 atatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggccttttt 136  Q
    ||||||||||||||||| ||||||| |   || |||||||  ||||| | |||||| |||||||| ||   | | || |||||||||||||||||  | |    
T  43122607 atatcaccacgcttgcattcagctatcgcatgccccttctttccacatcggaagcacttcttctcctcaccattgcagacattactcttgtggcccctct 43122706  T
Q  137 caccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactata 236  Q
    | ||||||||| | |||||||| || | | || ||||||||||||| || ||| |||||||||||||||| ||||  || |||||| || | ||||| ||    
T  43122707 cgccacacttgtagcaaacaatctctgcatgaacatctctcctcttaggtctcctctcatcattcaatctttgctctcctttgtcaacatgagcactgta 43122806  T
Q  237 cggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaat 336  Q
     ||||||   |||   ||||| ||||||   || |||||| || | ||||| || ||||||||||||||||| || ||||||||||| ||||| ||||||    
T  43122807 gggcttcggccgatcttgttgacccttgttcctccgctcattcctaaccttatagtgagctttcgtatcctcctcgtaaatcctacagctgctcaccaat 43122906  T
Q  337 tcagaaaagtttcttatctt 356  Q
    |||||||| |||||||||||    
T  43122907 tcagaaaaatttcttatctt 43122926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 37 - 206
Target Start/End: Original strand, 22465090 - 22465259
Alignment:
Q  37 atatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggccttttt 136  Q
    ||||| ||||||||||| ||||| ||||  |||||||||||||| || ||||| |||||||||||||| |   | ||| |||||||||||||||| ||      
T  22465090 atatctccacgcttgcattcagccaacatatgacccttctgaccgcatctgaaacatttcttctcatcttggatgcaagcattactcttgtggcccttca 22465189  T
Q  137 caccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatct 206  Q
    ||||||| ||| |||||| || ||||  |||||||| ||||| ||| |||  | ||||||||||||||||    
T  22465190 caccacatttgtaacaaataacatcaacaggagcatttctccccttaggctgcctctcatcattcaatct 22465259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 112 - 206
Target Start/End: Complemental strand, 16258189 - 16258095
Alignment:
Q  112 caaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatct 206  Q
    |||||||||||||||||||| || |||||||||||| | |||||||| |||| |||| ||||||||||||| || ||| |||||||| |||||||    
T  16258189 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatcagtcaatct 16258095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 112 - 206
Target Start/End: Complemental strand, 22591908 - 22591814
Alignment:
Q  112 caaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatct 206  Q
    |||||||||||||||||||| || |||||||||||| | |||||||| |||| |||| ||||||||||||| || ||| |||||||| |||||||    
T  22591908 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatcagtcaatct 22591814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 112 - 206
Target Start/End: Complemental strand, 22595463 - 22595369
Alignment:
Q  112 caaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatct 206  Q
    |||||||||||||||||||| || |||||||||||| | |||||||| |||| |||| ||||||||||||| || ||| |||||||| |||||||    
T  22595463 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatcagtcaatct 22595369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 43 - 243
Target Start/End: Original strand, 20779059 - 20779259
Alignment:
Q  43 ccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccac 142  Q
    ||||||||||| ||||| ||||  |||||||||||||| || ||||| |||||||||||||| |  || ||| |||||||||||||||| ||  ||||||    
T  20779059 ccacgcttgcattcagccaacacatgacccttctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggcccttcacaccac 20779158  T
Q  143 acttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggctt 242  Q
    | ||| ||||||||| ||||  | |||||| | |||  ||  |   | |||||||||||||||| || || || |||| |||||||||||| || |||||    
T  20779159 atttgtaacaaacaacatcaacatgagcatttttccctttttgtggcctctcatcattcaatctttgtttgcctttgttagcaggggcactgtagggctt 20779258  T
Q  243 c 243  Q
    |    
T  20779259 c 20779259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 366
Target Start/End: Original strand, 23474426 - 23474681
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgc 210  Q
    |||| |||||||||| |||||||| ||||||||  || | |||||||| |||| |  | | ||| || |  |||||||| |||||||||||||||| |||    
T  23474426 acaagcattactcttatggcctttctcaccacaagtgtagcaaacaatctcagcaacaacttctttctttctgggcctcctctcatcattcaatctttgc 23474525  T
Q  211 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 310  Q
    ||||| || |||||||| ||| | || |||||   |||||| || || ||||||||| | | |||| |||  |||||||||||||| || ||||| || |    
T  23474526 ttacccttatcagcaggagcaatgtaaggctttggacgactttgctgacccttgcctttcctctcattcacaaccttgtaatgagccttagtatcttcct 23474625  T
Q  311 cataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    |||  || || || ||||| ||||| ||||||||||| |  |||||||| ||||||    
T  23474626 catgtattctgcagctgctcaccaactcagaaaagttacggatcttctggtaacca 23474681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 162
Target Start/End: Complemental strand, 28892161 - 28892045
Alignment:
Q  46 cgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacact 145  Q
    |||||||| ||||| ||||  ||||| |||||||| || ||||| |||||||||||||| | ||| ||| |||||||||||||||| ||  ||||||| |    
T  28892161 cgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattactcttgtggcccttcacaccacatt 28892062  T
Q  146 tgaaacaaacaatatca 162  Q
    || ||||||||| ||||    
T  28892061 tgtaacaaacaacatca 28892045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 37 - 172
Target Start/End: Original strand, 20824593 - 20824728
Alignment:
Q  37 atatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggccttttt 136  Q
    ||||| ||||||||||| ||  | ||||  ||||| |||||||| || ||||| |||||||||||||| | ||| ||| |||||||||||||||| ||      
T  20824593 atatctccacgcttgcagtccaccaacacatgacctttctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattactcttgtggcccttca 20824692  T
Q  137 caccacacttgaaacaaacaatatcagtaggagcat 172  Q
    ||||||| ||| ||||||||| ||||  ||||||||    
T  20824693 caccacatttgtaacaaacaacatcaacaggagcat 20824728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 173
Target Start/End: Original strand, 18782246 - 18782408
Alignment:
Q  11 cctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagt 110  Q
    |||||||||| || ||  ||||||| ||||||  |||||||||||||||||  |  ||||||||||  ||||||| ||  ||||| ||    || | ||     
T  18782246 cctcttcattacaattgaagcatacgatatcattacgcttgcaatcagctacaatatgacccttcttgccacaccggacacattttttgatctcttcagg 18782345  T
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatc 173  Q
    |||||||||||||||||||||||| || ||||| |||||||||||||| || | |||||||||    
T  18782346 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgcaggagcatc 18782408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 314
Target Start/End: Original strand, 23461129 - 23461406
Alignment:
Q  37 atatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggccttttt 136  Q
    ||||||||| ||||||| ||||||||    |||| |||||  ||||||| ||| ||||||||| | ||||  | ||||||||| |||||||||||||| |    
T  23461129 atatcaccatgcttgcattcagctaaagtatgactcttcttgccacaccggaaacatttcttcacctcctctggacaaacattgctcttgtggcctttct 23461228  T
Q  137 caccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactata 236  Q
    ||||||| |||||| | ||||| || | |||||||||  || |||| |||| | | |||||   || ||| |  || || || |||||||||||||||||    
T  23461229 caccacaattgaaatagacaatttccgcaggagcatccttcttcttaggccgcctatcatcgaccattctctattttcccttatcagcaggggcactata 23461328  T
Q  237 cggcttctaacgactctgttgtccctt-gcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcata 314  Q
     |||||    |||||||| || ||||| | || | |||||| |||  ||||||||||||||||| || |||||||||||    
T  23461329 gggcttagggcgactctgctggcccttagtct-tccgctcattcacaaccttgtaatgagctttggtgtcctcttcata 23461406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 173
Target Start/End: Original strand, 20803755 - 20803891
Alignment:
Q  37 atatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggccttttt 136  Q
    ||||||| | ||||||| ||||||||    ||||||||||  ||||||| ||| ||||||||| | |||| ||  |||||||| |||||||||||||| |    
T  20803755 atatcactatgcttgcagtcagctaaagtatgacccttcttgccacaccagaaacatttcttcacctcctcagggcaaacatttctcttgtggcctttct 20803854  T
Q  137 caccacacttgaaacaaacaatatcagtaggagcatc 173  Q
    ||||| | |||||||| ||||| || | |||||||||    
T  20803855 caccataattgaaacagacaatctccgcaggagcatc 20803891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 320
Target Start/End: Complemental strand, 22329935 - 22329835
Alignment:
Q  220 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 319  Q
    |||||||||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| ||||||||||||||||| ||||    
T  22329935 tcagcaggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcc 22329836  T
Q  320 t 320  Q
    |    
T  22329835 t 22329835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 273 - 362
Target Start/End: Complemental strand, 28891934 - 28891845
Alignment:
Q  273 ctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    |||||||||||||||||||||||| ||||||||||| |||||||| || || |  || |||||||| || ||  |||| |||||||||||    
T  28891934 ctcactcatcaccttgtaatgagccttcgtatcctcctcataaattctgcagcaactcaccaattctgagaaaattctgatcttctgata 28891845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 220 - 320
Target Start/End: Complemental strand, 14996787 - 14996687
Alignment:
Q  220 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 319  Q
    |||||||||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||| ||| ||||| ||||||||||||||||| ||||    
T  14996787 tcagcaggggcactgtacggcttaggacgactctgctgtcccttgccctttctctcattcactacctcgtagtgagccttcgtatcctcttcatagatcc 14996688  T
Q  320 t 320  Q
    |    
T  14996687 t 14996687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 220 - 320
Target Start/End: Original strand, 19773298 - 19773398
Alignment:
Q  220 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 319  Q
    ||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| ||||||||||||||||| ||||    
T  19773298 tcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcc 19773397  T
Q  320 t 320  Q
    |    
T  19773398 t 19773398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 220 - 320
Target Start/End: Complemental strand, 27682448 - 27682348
Alignment:
Q  220 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 319  Q
    |||||||||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| |||||||||||||| || ||||    
T  27682448 tcagcaggggcactgtacggcttaggacgactctgctgtcccttgccctttctctcattcactaccttgtagtgagccttcgtatcctcttcgtagatcc 27682349  T
Q  320 t 320  Q
    |    
T  27682348 t 27682348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 320
Target Start/End: Original strand, 27521741 - 27521844
Alignment:
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 316  Q
    ||||||||||||||||| ||||||||   ||||||||| |||||||| ||  | | |||| |||  |||||||| ||||| ||||| ||||||||||| |    
T  27521741 ttgtcagcaggggcactgtacggcttaggacgactctgctgtcccttacccttcctctcattcactaccttgtagtgagccttcgtgtcctcttcataga 27521840  T
Q  317 tcct 320  Q
    ||||    
T  27521841 tcct 27521844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 311
Target Start/End: Original strand, 27613694 - 27613785
Alignment:
Q  220 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttc 311  Q
    |||||||||||||| ||||||||   |||||||||||||||||||||  | |  ||| |||  |||||||| ||||| ||||||||||||||    
T  27613694 tcagcaggggcactgtacggcttaggacgactctgttgtcccttgcccttcctttcattcactaccttgtagtgagccttcgtatcctcttc 27613785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 345
Target Start/End: Complemental strand, 26735882 - 26735648
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgc 210  Q
    |||| |||||||||| |||||||| |||| |||  || | |||||||| |||  |||||||||| || |  | |||||| |||||||||| | ||| ||     
T  26735882 acaagcattactcttatggcctttctcacaacaagtgtagcaaacaatctcaacaggagcatctttctttctaggcctcctctcatcattaactctttgt 26735783  T
Q  211 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 310  Q
    || || || |||| ||| ||||| || |||||   ||||||||| || || ||| || | |||||| | |  | |||||||||||| || |||||||| |    
T  26735782 tttcctttatcagtaggagcactgtaaggctttggacgactctgctgacctttgactttccgctcatttacaatcttgtaatgagccttagtatcctcct 26735683  T
Q  311 cataaatcctacaactgcttaccaattcagaaaag 345  Q
    ||||||| || |||||||| ||||  |||||||||    
T  26735682 cataaattctgcaactgctcaccagctcagaaaag 26735648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 320
Target Start/End: Complemental strand, 29473121 - 29473021
Alignment:
Q  220 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 319  Q
    ||||| ||| |||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| ||||||||||||||||| ||||    
T  29473121 tcagcggggacactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagcattcgtatcctcttcatagatcc 29473022  T
Q  320 t 320  Q
    |    
T  29473021 t 29473021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 320
Target Start/End: Original strand, 16359837 - 16359940
Alignment:
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 316  Q
    |||||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || |||||||| ||||| |    
T  16359837 ttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttggtatcctcctcataga 16359936  T
Q  317 tcct 320  Q
    ||||    
T  16359937 tcct 16359940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 366
Target Start/End: Complemental strand, 21331967 - 21331888
Alignment:
Q  287 tgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    |||||||||| || |||||||| ||||||||||| |||||||| ||||  |||||||| || |  |||||||| ||||||    
T  21331967 tgtaatgagccttagtatcctcctcataaatcctgcaactgctcaccagctcagaaaaattacggatcttctggtaacca 21331888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 118 - 317
Target Start/End: Original strand, 21410373 - 21410572
Alignment:
Q  118 ttactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgt 217  Q
    |||||||| || ||||| || |||||   |||||| ||||  |||||||||| ||||||| |  |||||||| ||| ||||||||  ||||||||||| |    
T  21410373 ttactcttatgacctttctctccacatcggaaacacacaacttcagtaggagtatctctctttctgggcctcctcttatcattcaccctatgcttaccct 21410472  T
Q  218 tgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaat 317  Q
    | ||||| || ||||| || || ||   |||||| |||||   ||| || || |||||| |||| | ||| ||||||||||| || || |||||||||||    
T  21410473 tatcagctggagcactgtaaggtttaccacgactttgttggtgcttacccctccgctcattcataatcttataatgagctttggtgtcatcttcataaat 21410572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 362
Target Start/End: Complemental strand, 21631381 - 21631302
Alignment:
Q  283 accttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    ||||||||||||||||||||||| || ||||| || || |||||||| |||| |||| |||| || |  |||||||||||    
T  21631381 accttgtaatgagctttcgtatcttcctcatagattctgcaactgctcaccagttcataaaatttacggatcttctgata 21631302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 23526182 - 23526345
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    |||||||||||||| ||  |||| || ||||||  ||| |||||||  |||||    |||||||||| |||||| ||||| ||| | ||  | ||  |||    
T  23526182 ccctcttcattgcaattgaagcacacaatatcattacggttgcaattggctaatgcatgacccttcttaccacatctgaaacatctttttacctctctag 23526281  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatc 173  Q
     |||| |||| |||||||||||||| |||||||| || ||||| ||||| |||| |||||||||    
T  23526282 gacaagcattgctcttgtggcctttctcaccacaattaaaacagacaatctcagcaggagcatc 23526345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 344
Target Start/End: Original strand, 25429826 - 25429885
Alignment:
Q  285 cttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaa 344  Q
    |||||||||||| || |||||||| ||||||||||| |||||||| ||||  ||||||||    
T  25429826 cttgtaatgagccttggtatcctcctcataaatcctgcaactgctcaccagctcagaaaa 25429885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 320
Target Start/End: Original strand, 34569829 - 34569932
Alignment:
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 316  Q
    |||||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || |||||||| ||||| |    
T  34569829 ttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttggtatcctcctcataga 34569928  T
Q  317 tcct 320  Q
    ||||    
T  34569929 tcct 34569932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 37288544 - 37288450
Alignment:
Q  220 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcata 314  Q
    ||||| || ||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| |||||||||||||||||    
T  37288544 tcagcgggagcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctcttcata 37288450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 362
Target Start/End: Original strand, 20770518 - 20770603
Alignment:
Q  277 ctcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    ||||||||||| || ||||| || |||||||| |||||||| ||||| || || |||||||| || ||  |||| |||||||||||    
T  20770518 ctcatcaccttatagtgagcctttgtatcctcctcataaattctacagctcctcaccaattccgagaaaattctgatcttctgata 20770603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 362
Target Start/End: Original strand, 20779289 - 20779378
Alignment:
Q  273 ctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    ||| ||||||||||| || ||||| || |||||||| |||||||| ||||| ||||| | |||||| || ||  |||| |||||||||||    
T  20779289 ctcgctcatcaccttatagtgagcctttgtatcctcctcataaattctacagctgctcaacaattccgagaaaattctgatcttctgata 20779378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 362
Target Start/End: Original strand, 20824829 - 20824918
Alignment:
Q  273 ctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    ||| |||||||||||||||||||  ||||||||||| || ||||| || || || || |||||||| || ||  |||| |||||||||||    
T  20824829 ctcgctcatcaccttgtaatgagtcttcgtatcctcctcgtaaattctgcagctactcaccaattctgagaaaattctgatcttctgata 20824918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 337
Target Start/End: Original strand, 22465326 - 22465390
Alignment:
Q  273 ctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaatt 337  Q
    ||| ||||||||||| |||||||| || |||||||| |||||||| ||||| || || |||||||    
T  22465326 ctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaatt 22465390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 163; Significance: 5e-87; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 16 - 366
Target Start/End: Complemental strand, 4374 - 4024
Alignment:
Q  16 tcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaa 115  Q
    ||||| ||||| ||||| || ||||| ||||||||||||||||| ||   ||| || |||||||||||||| ||||| |||||||||||   |  ||| |    
T  4374 tcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctcatctcgatcacaca 4275  T
Q  116 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttacc 215  Q
    ||||||| |||| | |||| |||||||||||||| |||| ||| ||||||||||||||||||||||| |||||| ||||||||||||| || || |||||    
T  4274 cattacttttgtagtctttctcaccacacttgaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcaacctctgtttacc 4175  T
Q  216 gttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataa 315  Q
     ||||||||||| ||||||||||| |||  ||||||||  |||||||| ||||| |||||||||||||| || ||||||||||| ||||||||||||||     
T  4174 tttgtcagcaggagcactatacggtttcggacgactctactgtcccttacctctgcgctcactcatcactttataatgagcttttgtatcctcttcatag 4075  T
Q  316 atcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    ||||||||||| |||||||||||||||||||| |||||||| |||||||||    
T  4074 atcctacaactacttaccaattcagaaaagttccttatcttttgataacca 4024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 161; Significance: 9e-86; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 2 - 362
Target Start/End: Original strand, 15292 - 15652
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    |||| ||||||||||||||||||||||| || || | |||||||||||||||||||||||    ||| |  |||||||||||||||||||| ||||||||    
T  15292 tgatatggccctcttcattgcagttataacaaacaacatcaccacgcttgcaatcagctagagtgtgtcatttctgaccacacctgaagcacttcttctc 15391  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
     |||||||||||||||||||||||||||||||| || ||||||||  | || | ||| |||| ||||||||||||||| ||||||||| ||||||||||     
T  15392 gtccttagtacaaacattactcttgtggcctttctcgccacacttatagcagaaaatctcagcaggagcatctctcctattgggcctcctctcatcattt 15491  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    || || ||||| |  ||||||||||| |||||||||||||||  ||||||||||||||| ||||   | || ||||||||||||||||||||||||||||    
T  15492 aacctctgctttcgcttgtcagcaggagcactatacggcttcggacgactctgttgtcctttgctcattcgatcactcatcaccttgtaatgagctttcg 15591  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    | ||||| ||||| || || || || |||||||||||||| || ||||| |||||||||||    
T  15592 tttcctcctcatagattctgcagctacttaccaattcagagaaatttctgatcttctgata 15652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 160; Significance: 3e-85; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 139 - 366
Target Start/End: Original strand, 3222 - 3449
Alignment:
Q  139 ccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacg 238  Q
    ||||||||||| |||| ||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  3222 ccacacttgaagcaaataatctcagtaggagcatctctcctcttgggcctcctctcatcattcaatctctgcttacccttgtcagcaggggcactatacg 3321  T
Q  239 gcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattc 338  Q
    |||||  |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||  | |||||||||||    
T  3322 gcttcggacgactctgttgtcccttgcctctgcgctcactcatcaccttataatgagctttcgtatcctcttcatatatcctgcaggtacttaccaattc 3421  T
Q  339 agaaaagtttcttatcttctgataacca 366  Q
    ||||||||| |||||||| |||||||||    
T  3422 agaaaagttccttatcttttgataacca 3449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 160; Significance: 3e-85; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 2 - 325
Target Start/End: Original strand, 22054120 - 22054443
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    |||| ||||||||||| ||||||||||| ||||| | |||||||||||||||||| ||||| | |||||||||||||||||| |||||||| ||||||||    
T  22054120 tgatatggccctcttcgttgcagttataacatacaacatcaccacgcttgcaatccgctaaaaggtgacccttctgaccacatctgaagcacttcttctc 22054219  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    |||||| |||||||||||||||||||||||||| || |||||||| |||||||| || |||| || |||||||||||| || |||||| ||||||||||     
T  22054220 atccttggtacaaacattactcttgtggcctttctcgccacacttaaaacaaactatctcagcagaagcatctctcctattcggcctcctctcatcatta 22054319  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    | ||| |||||||| || |||||||||||||| ||||||||   |||||||||  ||||||| ||||| ||||||||||||||||| ||||||||||| |    
T  22054320 agtctctgcttacccttatcagcaggggcactgtacggcttaggacgactctgccgtcccttacctcttcgctcactcatcaccttataatgagctttgg 22054419  T
Q  302 tatcctcttcataaatcctacaac 325  Q
    | ||||| ||| | ||||| ||||    
T  22054420 tgtcctcctcacagatcctgcaac 22054443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 10 - 366
Target Start/End: Original strand, 21928693 - 21929049
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    ||||||||||  || |||||||| || | ||||||||||||||||||| | ||   ||| || ||||| ||||| ||||| || ||||||||||| |  |    
T  21928693 ccctcttcatcacaattatagcaaacgacatcaccacgcttgcaatcacccaaagtgtgtcctttctgtccacatctgaaacacttcttctcatc-tcgg 21928791  T
Q  110 t-acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctat 208  Q
    | ||  |||||||||| |||||| ||||| |||||||||||||||| ||| ||||||||||||||||||||| | |||||| ||||||||||||  || |    
T  21928792 tcacttacattactctcgtggcccttttcgccacacttgaaacaaagaatctcagtaggagcatctctcctcctaggcctcctctcatcattcagcctct 21928891  T
Q  209 gcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctc 308  Q
    | || || ||||||||||| ||||||||||| ||   |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  21928892 gttttcctttgtcagcaggagcactatacggtttaggacgactctgttgtcccttacctctacgctcactcatcaccttgtaatgagctttggtatcctc 21928991  T
Q  309 ttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    |||||| || ||||| |||||||||||||||||||| |||||||||||||||||||||    
T  21928992 ttcatagattctacagctgcttaccaattcagaaaaatttcttatcttctgataacca 21929049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 10 - 366
Target Start/End: Original strand, 19985445 - 19985801
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    ||||||||||  || |||||||| || | ||| |||| |||||||||||||||   ||| |  ||||| ||||| |||||  | |||||||||||         
T  19985445 ccctcttcatcacaattatagcaaacaacatccccactcttgcaatcagctaatgtgtgtcatttctgtccacatctgaaatacttcttctcatcacggt 19985544  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatg 209  Q
     ||| |||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||| |||  || ||    
T  19985545 cacatacattactcttgtggcttttttcgccacacttgaaacaaacaatctcagtaggagcatctctcctcttaggcctcctctcatcaatcatcctctg 19985644  T
Q  210 cttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctct 309  Q
     ||||| ||||| |||||||||||||||||||||  ||||||||| | ||||||||| || ||||||||||||||||||||||||||||| |||||||||    
T  19985645 tttacccttgtccgcaggggcactatacggcttcggacgactctgctatcccttgccactgcgctcactcatcaccttgtaatgagctttggtatcctct 19985744  T
Q  310 tcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    ||||| |||||||||||||||||||| |||||||| ||| ||||||| |||||||||    
T  19985745 tcatatatcctacaactgcttaccaaatcagaaaaatttattatcttttgataacca 19985801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 2 - 341
Target Start/End: Complemental strand, 22027804 - 22027465
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    |||| ||||||||||||||| |||||||||| || |  || || | ||| |||||||||||   ||||||||||||||||||||||||||| ||||||||    
T  22027804 tgatatggccctcttcattgtagttatagcaaacaacgtctcccctcttacaatcagctaatgtgtgacccttctgaccacacctgaagcacttcttctc 22027705  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    ||| || |||||||||||||||||||||||||| || ||||||||| ||||||| || |||| ||||||||||||||| ||||||||| |||||||||||    
T  22027704 atctttggtacaaacattactcttgtggcctttatcgccacacttgtaacaaactatctcagcaggagcatctctcctattgggcctcctctcatcattc 22027605  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    ||||| ||||| || ||||||||||||||||| ||||| ||   ||||||||| |||||||| || || ||||||||||||||||| |||||| |||| |    
T  22027604 aatctttgctttcccttgtcagcaggggcactgtacggtttaggacgactctgctgtcccttaccacttcgctcactcatcaccttataatgatcttttg 22027505  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcaga 341  Q
    | ||||| ||||| ||||| ||||  |||||||| |||||    
T  22027504 tgtcctcctcatagatcctgcaacgacttaccaaatcaga 22027465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 25 - 356
Target Start/End: Original strand, 22374149 - 22374480
Alignment:
Q  25 ttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactct 124  Q
    |||||||| || ||||||||||||||||||||||||||   ||| || ||||  |||||||| || || ||||| |||||      ||| ||||||||||    
T  22374149 ttatagcaaacaatatcaccacgcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttttcatcacggtcacatacattactct 22374248  T
Q  125 tgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagc 224  Q
    ||||| |||||||||||||||||||||| ||||| |||||||||| |||||||||| | |||||| |||| ||||| | ||| || ||||| ||| ||||    
T  22374249 tgtggtctttttcaccacacttgaaacagacaatctcagtaggagaatctctcctcctaggcctcctctcctcattaagtctttgtttacctttgacagc 22374348  T
Q  225 aggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaa 324  Q
    ||||||||||||||| |||  ||||||||  |||||||| ||||| ||||||||||||||||| ||||||||||| |||||||| | ||| ||||||||     
T  22374349 aggggcactatacggtttcggacgactctactgtcccttacctctgcgctcactcatcaccttataatgagcttttgtatcctcctgatagatcctacag 22374448  T
Q  325 ctgcttaccaattcagaaaagtttcttatctt 356  Q
    || || ||||| |||||||| || ||||||||    
T  22374449 ctactcaccaaatcagaaaaattccttatctt 22374480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 10 - 326
Target Start/End: Complemental strand, 16268740 - 16268424
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    |||||| ||||||| || ||||| || ||||| ||||||||||| |||||||     |||||||||||||||||||||||||| ||| ||||||| |||     
T  16268740 ccctctccattgcaattgtagcagacaatatccccacgcttgcattcagctaggctatgacccttctgaccacacctgaagcacttcctctcatctttac 16268641  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatg 209  Q
     |||||||||||||||||||||||| |||||||||||| |||||||||| |||| ||||||||||||| |||| |||||| | |||||| |||   | ||    
T  16268640 cacaaacattactcttgtggcctttctcaccacacttgtaacaaacaatctcagaaggagcatctctcttcttaggcctcctgtcatcactcatcttctg 16268541  T
Q  210 cttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctct 309  Q
    ||| || ||||||||| | ||||| || |||||   |||| ||||||||||||| || || | ||||||||| |  |||||||||||||| || || |||    
T  16268540 ctttcctttgtcagcaagagcactgtaaggcttaggacgattctgttgtcccttacccctcctctcactcattatattgtaatgagctttggtgtcttct 16268441  T
Q  310 tcataaatcctacaact 326  Q
    |||||||| ||||||||    
T  16268440 tcataaattctacaact 16268424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 17 - 345
Target Start/End: Original strand, 28984183 - 28984511
Alignment:
Q  17 cattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaac 116  Q
    |||||||||| || || || || || ||||||||||| ||||||||   ||||||||||||||||||||||||||| ||| | |||||  |   ||||||    
T  28984183 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 28984282  T
Q  117 attactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccg 216  Q
    |||||||||||||||||| |||||||||||| |||||||||| |||   |||||||||||||||||||||||| | ||||||  ||  || ||||| ||     
T  28984283 attactcttgtggcctttctcaccacacttgtaacaaacaatctcaactggagcatctctcctcttgggcctcctatcatcacccatcctctgctttccc 28984382  T
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 316  Q
    ||||| ||||| ||||| || |||||   |||| ||||||||||||| || || | ||||||||| | ||||||||||||||| || || ||||||||||    
T  28984383 ttgtccgcaggagcactgtaaggcttaggacgattctgttgtcccttacccctcctctcactcataatcttgtaatgagctttggtgtcttcttcataaa 28984482  T
Q  317 tcctacaactgcttaccaattcagaaaag 345  Q
    ||||||| ||| | ||||| |||||||||    
T  28984483 tcctacacctgttaaccaactcagaaaag 28984511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 335
Target Start/End: Complemental strand, 31414045 - 31413723
Alignment:
Q  13 tcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtac 112  Q
    ||||| |||||||| ||||| || || || |||||||| || |||||||    ||| || |||||||||||||| || || ||| |||||||  ||  ||    
T  31414045 tcttcgttgcagttgtagcaaacaatgtccccacgcttacattcagctagtgtgtgtcctttctgaccacacctaaaacacttcctctcatctctaccac 31413946  T
Q  113 aaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgctt 212  Q
    || |||| ||||| |||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  31413945 aagcattgctcttatggcctttttcaccacacttgaaacaaacaatttcaacaggagcatctctcctcttgggcctcctctcatcattcattctctgctt 31413846  T
Q  213 accgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttca 312  Q
     || |||||||||||||| || || || ||   ||||||||| |||||||| || || |||||||||||||  |||||||||||||| || || || |||    
T  31413845 tcccttgtcagcaggggcgctgtaaggtttaggacgactctgctgtcccttaccccttcgctcactcatcattttgtaatgagctttggtgtcttcctca 31413746  T
Q  313 taaatcctacaactgcttaccaa 335  Q
    || ||||| || ||| |||||||    
T  31413745 tatatcctgcagctgtttaccaa 31413723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 113 - 344
Target Start/End: Original strand, 20391454 - 20391685
Alignment:
Q  113 aaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgctt 212  Q
    ||||||||||||||||||| || |||||||||||| | |||||||| |||| |||| ||||||| ||||| || ||| |||||||||||||||| || ||    
T  20391454 aaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagaaggaacatctctactcttaggtctcctctcatcattcaatctttgttt 20391553  T
Q  213 accgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttca 312  Q
     || ||||||||||| ||||| || ||||||  |||||  || || || |||   || ||||||||||| ||||| ||||||||||| ||||||||||||    
T  20391554 ccctttgtcagcaggagcactgtagggcttcggacgaccttgctgacctttgttcctccgctcactcataaccttataatgagctttggtatcctcttca 20391653  T
Q  313 taaatcctacaactgcttaccaattcagaaaa 344  Q
    ||||| ||||| ||||| ||||||||||||||    
T  20391654 taaattctacagctgctcaccaattcagaaaa 20391685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 362
Target Start/End: Complemental strand, 29300939 - 29300590
Alignment:
Q  13 tcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtac 112  Q
    |||||||||||||||||| | || || || |||||||| || |||||||    ||| ||  ||||||||||||| || || ||| | |||||  ||  ||    
T  29300939 tcttcattgcagttatagtagacaatgtccccacgcttacattcagctagtgtgtgtcctctctgaccacacctaaaacacttcctttcatctctaccac 29300840  T
Q  113 aaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgctt 212  Q
    || |||| |||||||||||| ||||||||||||| ||||||||||| ||||  ||| |||||| ||||||||||||| | ||||||||||   | |||||    
T  29300839 aagcattgctcttgtggcctctttcaccacacttaaaacaaacaatttcagcgggaacatctcccctcttgggcctcctatcatcattcatcttctgctt 29300740  T
Q  213 accgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttca 312  Q
     || ||||||||||| ||||| || || ||   ||||||||  |||||||| || || | ||||||||| ||||||||||||||||| || ||||| |||    
T  29300739 ccctttgtcagcaggagcactgtaaggtttaggacgactctaatgtcccttacccctcctctcactcattaccttgtaatgagcttttgtgtcctcctca 29300640  T
Q  313 taaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    || ||||| || |||||||| || ||||| ||   ||| |||||||||||    
T  29300639 tatatcctgcagctgcttactaactcagagaaaactctaatcttctgata 29300590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 37 - 344
Target Start/End: Complemental strand, 6606958 - 6606651
Alignment:
Q  37 atatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggccttttt 136  Q
    ||||| ||||||||||| ||||||| |   || |||||||  ||||| | |||||| |||||||| ||   | | |||||||||||||||||||| || |    
T  6606958 atatccccacgcttgcattcagctatcgtatgccccttctttccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtggcccttct 6606859  T
Q  137 caccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactata 236  Q
    ||||||||||| | |||||||| ||||||||| ||||||| ||||| || ||| |||||||||||||||| ||||  ||  |||||  |||  |||| ||    
T  6606858 caccacacttgtagcaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctttgctctcctctgtcaataggaacactgta 6606759  T
Q  237 cggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaat 336  Q
     ||||||  ||| |  || || ||||||   || ||||||||| | ||||| |||||||| ||||||||||| |||||||| |||||||| || ||||||    
T  6606758 gggcttcggacgtccttgctgacccttgttcctccgctcactcctaaccttataatgagccttcgtatcctcctcataaattctacaactactcaccaat 6606659  T
Q  337 tcagaaaa 344  Q
    ||||||||    
T  6606658 tcagaaaa 6606651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 320
Target Start/End: Original strand, 22043092 - 22043402
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    ||||||||||| |||||  |||| || ||||||  |||||||||||||||||  |  ||||||||||  |||||||  |  ||||||||    || |  |    
T  22043092 ccctcttcattacagttgaagcacacaatatcattacgcttgcaatcagctacaatatgacccttcttgccacaccgaacacatttcttgatctcttctg 22043191  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatg 209  Q
     |||||||||||||||||||||||| |||||||| |||||||||  ||| ||||| ||||||||  || |||| |||| | | |||||   || ||| ||    
T  22043192 gacaaacattactcttgtggcctttctcaccacaattgaaacaagtaatctcagttggagcatccttcttcttaggccgcctatcatcgaccattctctg 22043291  T
Q  210 cttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctct 309  Q
     || || ||||||| |||||||||||| |||||     ||||||| || ||||||    | |||||| |||  |||||||||||||| || ||||||||     
T  22043292 tttgcccttgtcagtaggggcactataaggcttagggtgactctgctggcccttggtcttccgctcattcacaaccttgtaatgagccttggtatcctcc 22043391  T
Q  310 tcataaatcct 320  Q
    |||||||||||    
T  22043392 tcataaatcct 22043402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 111 - 366
Target Start/End: Original strand, 22523876 - 22524131
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgc 210  Q
    |||| |||||||| |||||||||| || |||||  |  | || ||||| |||  |||||||||| || || | |||| | |||||||||| | ||| ||     
T  22523876 acaagcattactcctgtggcctttctcgccacaagtatagcacacaatctcaacaggagcatctttcttcctaggccgcctctcatcattaactctttgt 22523975  T
Q  211 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 310  Q
    || || || |||||||||||||| || |||||   ||||||||| || || |||||| | |||||| |||  | |||||||||||| || |||||||| |    
T  22523976 tttcccttatcagcaggggcactgtaaggctttggacgactctgctgacctttgccttttcgctcattcacaatcttgtaatgagccttagtatcctcct 22524075  T
Q  311 cataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
     ||||||||| |||||||| ||||  || |||||||| |  |||||||| ||||||    
T  22524076 tataaatcctgcaactgctcaccagctcggaaaagttacggatcttctggtaacca 22524131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 46 - 173
Target Start/End: Complemental strand, 30310624 - 30310497
Alignment:
Q  46 cgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacact 145  Q
    ||||||||||||||||  |  ||||||||||  ||||||| ||  ||||||||    || | || |||||||||||||||||||||||| || ||||| |    
T  30310624 cgcttgcaatcagctacaatatgacccttcttgccacaccagacacatttcttgatctcttcaggacaaacattactcttgtggcctttctcgccacagt 30310525  T
Q  146 tgaaacaaacaatatcagtaggagcatc 173  Q
    |||||||||||||||| | |||||||||    
T  30310524 tgaaacaaacaatatccgcaggagcatc 30310497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 366
Target Start/End: Complemental strand, 21970793 - 21970711
Alignment:
Q  284 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    |||| ||||| ||||| ||||| || |||||||||||||| || || ||||| |||||||||||||| |||||||||||||||    
T  21970793 ccttataatgggctttggtatcatcctcataaatcctacagctactcaccaactcagaaaagtttctaatcttctgataacca 21970711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 366
Target Start/End: Complemental strand, 22004323 - 22004241
Alignment:
Q  284 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    |||| ||||||||||| ||||| ||||||||||||||||| || || ||||| | |||||||||| | |||||||||||||||    
T  22004323 ccttataatgagctttggtatcatcttcataaatcctacagctactcaccaacttagaaaagtttataatcttctgataacca 22004241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 323
Target Start/End: Original strand, 18860049 - 18860152
Alignment:
Q  220 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 319  Q
    ||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| ||||||||||||||||| ||||    
T  18860049 tcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcc 18860148  T
Q  320 taca 323  Q
    ||||    
T  18860149 taca 18860152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 242
Target Start/End: Original strand, 32603511 - 32603642
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgc 210  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||||| || | |||||||||  || |||| || | | | |||||   || ||| |||    
T  32603511 acaaacattactcttgtggcctttcccaccacagttgaaacaaacaatttccgaaggagcatccttcttcttaggtcgcctatcatcgaccattctctgc 32603610  T
Q  211 ttaccgttgtcagcaggggcactatacggctt 242  Q
    || || || ||||||||||||||||| |||||    
T  32603611 ttgcccttatcagcaggggcactataaggctt 32603642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 220 - 320
Target Start/End: Complemental strand, 22126268 - 22126168
Alignment:
Q  220 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 319  Q
    ||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| ||||||||||||||||| ||||    
T  22126268 tcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcc 22126169  T
Q  320 t 320  Q
    |    
T  22126168 t 22126168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 242
Target Start/End: Original strand, 15536744 - 15536880
Alignment:
Q  106 ttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatc 205  Q
    |||| ||||||||||||||||||||||| ||| ||||| || ||||||| ||| || | |||||||||  || |||| |||| | | |||||   || ||    
T  15536744 ttaggacaaacattactcttgtggccttcttcgccacaattaaaacaaataatctccgaaggagcatccttcttcttaggccgcctatcatcgaccattc 15536843  T
Q  206 tatgcttaccgttgtcagcaggggcactatacggctt 242  Q
    | ||||| || || || |||||||||||||| |||||    
T  15536844 tctgcttgcccttatcggcaggggcactataaggctt 15536880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 314
Target Start/End: Complemental strand, 19481390 - 19481287
Alignment:
Q  211 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 310  Q
    ||||| |||||||| |||||||| ||||||||   ||||||||| |||||||| ||  | | |||| |||  |||||||| | ||| |||||||||||||    
T  19481390 ttacccttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttacccttcctctcattcactaccttgtagtaagccttcgtatcctctt 19481291  T
Q  311 cata 314  Q
    ||||    
T  19481290 cata 19481287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 21391276 - 21391214
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatc 173  Q
    |||| ||||||||||||||||||| ||||||||    ||||||||||| |||| |||||||||    
T  21391276 acaagcattactcttgtggcctttctcaccacaagaaaaacaaacaatctcagcaggagcatc 21391214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 21780602 - 21780540
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatc 173  Q
    |||| ||||||||||||||||||| ||||||||    ||||||||||| |||| |||||||||    
T  21780602 acaagcattactcttgtggcctttctcaccacaagaaaaacaaacaatctcagcaggagcatc 21780540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 320
Target Start/End: Complemental strand, 22117478 - 22117384
Alignment:
Q  226 ggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcct 320  Q
    |||||||| ||||||||   |||||| || |||||||||||  | | |||| |||  |||||||| ||||| ||||||||||||||||| |||||    
T  22117478 ggggcactgtacggcttaggacgactttgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcct 22117384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 366
Target Start/End: Original strand, 22990520 - 22990666
Alignment:
Q  220 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 319  Q
    |||||||| ||||| || |||||   |||||| || || || |||||| | |||||| |||  | |||||||||||| || ||||| || ||||||||||    
T  22990520 tcagcaggagcactgtaaggctttggacgactttgctgacctttgcctttccgctcattcacaatcttgtaatgagccttagtatcttcctcataaatcc 22990619  T
Q  320 tacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    | |||||||| ||||  |||||||| || |  |||||||| ||||||    
T  22990620 tgcaactgctcaccagctcagaaaaattacggatcttctggtaacca 22990666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 153
Target Start/End: Original strand, 22031403 - 22031510
Alignment:
Q  45 acgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacac 144  Q
    |||||||||||||||||  |  ||||||||||  ||||||| ||  ||||||||    || |||| ||||||||| ||||| ||||| |||||||||||     
T  22031403 acgcttgcaatcagctacaatatgacccttcttgccacaccggacacatttctttatctctttaggacaaacattgctcttatggcc-ttttcaccacaa 22031501  T
Q  145 ttgaaacaa 153  Q
    |||||||||    
T  22031502 ttgaaacaa 22031510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 329
Target Start/End: Complemental strand, 22421134 - 22421090
Alignment:
Q  285 cttgtaatgagctttcgtatcctcttcataaatcctacaactgct 329  Q
    |||||||||||| || |||||||| ||||||||||| ||||||||    
T  22421134 cttgtaatgagccttagtatcctcctcataaatcctgcaactgct 22421090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 16 - 366
Target Start/End: Complemental strand, 953 - 603
Alignment:
Q  16 tcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaa 115  Q
    ||||||||||||||  | || || || |||||||| ||||||||||    ||  || |||||||||||||||||||| |||||||||||  ||  |||||    
T  953 tcattgcagttataataaacaatgtccccacgcttacaatcagctagagtgtatcctttctgaccacacctgaagcacttcttctcatctctatcacaaa 854  T
Q  116 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttacc 215  Q
    | |||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||| |||||||||| || || | ||||||    
T  853 cgttactcttgtggcctttttcaccacacttgaagcaaacaatctcggtaggagcatctctcctcttgggcctcctctcatcatttaacctcttcttacc 754  T
Q  216 gttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataa 315  Q
     ||||||||||| ||| |||||||||||  |||||||||||||||||| ||||| || ||||||||||||||||||||||||||  | ||||| ||||||    
T  753 cttgtcagcaggagcattatacggcttcggacgactctgttgtcccttacctctgcgttcactcatcaccttgtaatgagctttgttgtcctcctcataa 654  T
Q  316 atcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    ||||| || || |||||||| ||||| || |||||| | ||||||||||||    
T  653 atcctgcagctacttaccaaatcagagaaatttctttttttctgataacca 603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 158; Significance: 5e-84; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 73 - 366
Target Start/End: Complemental strand, 555 - 262
Alignment:
Q  73 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcat 172  Q
    |||||||||||||||||||| |||||||||||  ||  ||||||| |||| ||||||||||| || |||||||||||||||||||||||  |||||||||    
T  555 ttctgaccacacctgaagcacttcttctcatctgtatcacaaacactacttttgtggcctttctcgccacacttgaaacaaacaatatctataggagcat 456  T
Q  173 ctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacg 272  Q
    ||||||||||||||||  |||||||||| || || |||||||| ||||||| ||| |||||||||||||||  |||||| || |||||||| ||||||||    
T  455 ctctcctcttgggccttctctcatcatttaacctctgcttacccttgtcagaaggagcactatacggcttcggacgactgtgctgtcccttacctctacg 356  T
Q  273 ctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
     | ||||||||||||||||||||||||| | ||||| ||||||||||| |||||||||||||| ||||| |||||| | |||||||||||||||    
T  355 tttactcatcaccttgtaatgagctttcctgtcctcctcataaatcctgcaactgcttaccaaatcagagaagtttttaatcttctgataacca 262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 155; Significance: 3e-82; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 73 - 366
Target Start/End: Original strand, 42989 - 43282
Alignment:
Q  73 ttctgaccacacctgaagcatttcttctcatccttagt-acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagca 171  Q
    ||||||| |||||| ||||| ||||||||||| |  || |||||||||||||||||||||||| |||| ||||||||||||||  || ||||||||||||    
T  42989 ttctgactacacctaaagcacttcttctcatc-tcggtcacaaacattactcttgtggcctttctcacaacacttgaaacaaattatctcagtaggagca 43087  T
Q  172 tctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctac 271  Q
    ||||||||||| |||||| ||||||||||||| || || ||||| |||||||||||||||||||||||||||  ||||||||  |||||||||||||  |    
T  43088 tctctcctcttaggcctcctctcatcattcaacctctgtttacccttgtcagcaggggcactatacggcttcggacgactctactgtcccttgcctcggc 43187  T
Q  272 gctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    ||| |||||||||||||||||||||||| |||||||| ||||| ||| |||| ||||||||||| ||||| ||||||||||| ||||||||||||    
T  43188 gcttactcatcaccttgtaatgagcttttgtatcctcatcatagatcttacagctgcttaccaaatcagagaagtttcttattttctgataacca 43282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 154; Significance: 1e-81; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 2 - 335
Target Start/End: Original strand, 40278 - 40611
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    |||| ||||||||||| ||||||||||| ||||| | ||||| |||||||||||| ||||||| ||||||||||| ||||||||||||||| ||||| ||    
T  40278 tgatatggccctcttcgttgcagttataacatacaacatcacaacgcttgcaatccgctaacatgtgacccttctaaccacacctgaagcacttcttatc 40377  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    ||| || |||||||||||||||||||||||||| || ||||||||  |||| || || |||| ||||||||||||||| || |||||| |||||||||||    
T  40378 atctttggtacaaacattactcttgtggcctttctcgccacacttataacagactatctcagcaggagcatctctcctattcggcctcctctcatcattc 40477  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    | ||| ||||| || ||||||||||||||||| ||||| ||   |||||||||||||||| | ||||| ||||||||||||||||| ||||||||||| |    
T  40478 agtctttgctttcccttgtcagcaggggcactgtacggtttaggacgactctgttgtcccatacctcttcgctcactcatcaccttataatgagcttttg 40577  T
Q  302 tatcctcttcataaatcctacaactgcttaccaa 335  Q
    | ||||||| ||| || || ||||  ||||||||    
T  40578 tgtcctctttatagattctgcaacgacttaccaa 40611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 173
Target Start/End: Complemental strand, 17431 - 17262
Alignment:
Q  4 atgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcat 103  Q
    ||||| |||||||||||||||||| ||||||| |||||| || | ||||| |||||||     ||||||||||  ||||| | ||| ||| ||||   ||    
T  17431 atgtgaccctcttcattgcagttaaagcatacaatatcatcatgtttgcactcagctagtgcatgacccttcttcccacatcggaaacatctcttggtat 17332  T
Q  104 ccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatc 173  Q
    ||  || |||| |||||||||||||||| || ||||||||    ||||||||||| || |||||||||||    
T  17331 ccccaggacaagcattactcttgtggcccttctcaccacaagaaaaacaaacaatctctgtaggagcatc 17262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 154; Significance: 1e-81; HSPs: 4)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 40 - 341
Target Start/End: Complemental strand, 11952 - 11651
Alignment:
Q  40 tcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcac 139  Q
    ||||||||||||||||||||||    ||| || |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| || |    
T  11952 tcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggcctttctcgc 11853  T
Q  140 cacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacgg 239  Q
    |||||||| ||||||| || |||||||||||||||||||||||||||||| |||||||||| | ||| ||||| || ||||||||||| |||||||| ||    
T  11852 cacacttgtaacaaacgatctcagtaggagcatctctcctcttgggcctcctctcatcattaagtctctgctttcctttgtcagcaggagcactatatgg 11753  T
Q  240 cttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattca 339  Q
     ||   ||||||||| |||||||| ||||| | ||||||||||||||| |||||||| || || ||||||||||| ||||| || ||||||||||| |||    
T  11752 tttaggacgactctgctgtcccttacctcttctctcactcatcaccttataatgagccttagtgtcctcttcatatatcctgcagctgcttaccaaatca 11653  T
Q  340 ga 341  Q
    ||    
T  11652 ga 11651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 16 - 362
Target Start/End: Complemental strand, 2022 - 1676
Alignment:
Q  16 tcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaa 115  Q
    ||||||||||||||||| || |  || || ||||| |||||||||||   ||| || |||||||||||||||||||| ||||||||||| |||  |||||    
T  2022 tcattgcagttatagcaaacaacgtctccccgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacaaa 1923  T
Q  116 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttacc 215  Q
    ||||||||||||||||||| |||||||||||| | |||||||| |||| |||||||||| |||||||||||||| ||||||||||||  || || || ||    
T  1922 cattactcttgtggcctttctcaccacacttgtagcaaacaatttcagcaggagcatctatcctcttgggcctcctctcatcattcagcctctgttttcc 1823  T
Q  216 gttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataa 315  Q
     ||||||||||| |||||||| || ||   | ||||||| |||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||||||     
T  1822 tttgtcagcaggagcactatatggtttaggatgactctgctgtcccttacctctgcgctcactcatcaccttgtaatgagctttagtatcttcttcatat 1723  T
Q  316 atcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    ||| | |  || || ||||| ||||| ||  ||||||||||||||||    
T  1722 atcatgctgctactcaccaaatcagagaaaattcttatcttctgata 1676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 4 - 362
Target Start/End: Original strand, 70594 - 70952
Alignment:
Q  4 atgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcat 103  Q
    ||||||||||| ||||| |||||||| || || ||||| ||||||||||| ||||| ||||  ||||| || ||||| || ||||| || ||||||||||    
T  70594 atgtggccctcctcattacagttataacaaacaatatctccacgcttgcattcagccaacacatgacctttatgaccgcatctgaaacacttcttctcat 70693  T
Q  104 ccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaa 203  Q
    | || || || ||||||| ||||||||||||  ||||||||||| ||||||||| ||||  |||||||||||||| | | |||| | |||||||||||||    
T  70694 ctttggtgcagacattacccttgtggcctttcgcaccacacttgtaacaaacaacatcaacaggagcatctctccccctaggccgcctctcatcattcaa 70793  T
Q  204 tctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgta 303  Q
    ||| || || || |||||||||||  || | || ||||||   |||||    || |||||    ||   ||| ||||||||||| || ||||| || |||    
T  70794 tctttgttttcctttgtcagcaggaacaatgtagggcttcgggcgactactctgacccttattcctcttctcgctcatcaccttatagtgagcctttgta 70893  T
Q  304 tcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    ||||| ||||||||| |||| || || ||||||||||| || ||||| |||||||||||    
T  70894 tcctcctcataaatcatacagctactcaccaattcagagaaatttctgatcttctgata 70952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 242
Target Start/End: Complemental strand, 122141 - 122020
Alignment:
Q  121 ctcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgt 220  Q
    ||||||||||||||||||||||| |||||||||  ||| ||||  ||||||||  || |||| |||| | | |||||   || ||| || || || || |    
T  122141 ctcttgtggcctttttcaccacaattgaaacaagtaatctcagctggagcatccttcttcttaggccgcctatcatcgaccattctctgtttgcccttat 122042  T
Q  221 cagcaggggcactatacggctt 242  Q
    |||||||||||||||| |||||    
T  122041 cagcaggggcactatagggctt 122020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 153; Significance: 5e-81; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 10 - 362
Target Start/End: Original strand, 54275 - 54627
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    |||||||||||||||||||| || || | ||||||||||||||||| |||||    ||| |||||||||||||||||||| || ||||||||||| ||||    
T  54275 ccctcttcattgcagttataacaaacaacatcaccacgcttgcaataagctagagtgtgtcccttctgaccacacctgaaacacttcttctcatctttag 54374  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatg 209  Q
    ||||||||||||||||||||||||| || ||||||||| ||||||| || |||| | |||||| ||  || ||||||||| ||||||||||||| || ||    
T  54375 tacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaagagcatttcatctattgggcctcctctcatcattcaacctctg 54474  T
Q  210 cttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctct 309  Q
    ||| || ||||||||||| ||||||||||||||   ||||||||| ||||| ||||  || || |||||||||||||| |||||||||||| | |||||     
T  54475 cttccctttgtcagcaggagcactatacggctttggacgactctgatgtcctttgctccttcgatcactcatcaccttataatgagctttcatgtcctcc 54574  T
Q  310 tcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    ||||| || || || || |||||||||||||| |||||||| |||||||||||    
T  54575 tcatagattctgcagctacttaccaattcagagaagtttctgatcttctgata 54627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 152; Significance: 2e-80; HSPs: 2)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 13 - 362
Target Start/End: Original strand, 5671 - 6017
Alignment:
Q  13 tcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtac 112  Q
    |||||||| || || ||||| || | ||| |||||||| |||||||||||   ||| || |||||||||||||| ||||| |||||||||||   |  ||    
T  5671 tcttcattacaattgtagcaaacaacatccccacgcttacaatcagctaaagtgtgtcctttctgaccacacctaaagcacttcttctcatctcgatcac 5770  T
Q  113 aaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgctt 212  Q
    | || ||||||||||||||||| |||||||||||||| ||||  || |||||||||||||||||||||||  ||||| |||||||||||||||| |||||    
T  5771 acacgttactcttgtggcctttctcaccacacttgaagcaaattatctcagtaggagcatctctcctcttaagcctcctctcatcattcaatctctgctt 5870  T
Q  213 accgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttca 312  Q
    ||| ||||||||||||   ||||||||||||  |||||| ||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||    
T  5871 acccttgtcagcaggg---ctatacggcttcggacgactatgttgtcccttacctctgcgctcactcatcaccttgtaataagctttcgtatcctcttca 5967  T
Q  313 taaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    || ||||| || || |||||||||||||| || || |||||||| |||||    
T  5968 tatatcctgcagctacttaccaattcagagaaattccttatcttttgata 6017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 17 - 345
Target Start/End: Complemental strand, 11812 - 11484
Alignment:
Q  17 cattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaac 116  Q
    |||||||||| || || || || || ||||||||||  ||||||||   ||||||||||||||||||||||||||| ||| | |||||  |   ||| ||    
T  11812 cattgcagttgtaacagacaatgtccccacgcttgctttcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacatac 11713  T
Q  117 attactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccg 216  Q
    |||||||||||||||||| | |||||||||| | || ||||| |||   || |||||||||||||||||| || | ||||||  ||   | ||||| ||     
T  11712 attactcttgtggcctttcttaccacacttgtatcatacaatctcatctggtgcatctctcctcttgggcttcctatcatcacccatcttctgctttcct 11613  T
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 316  Q
    ||||||||| | ||| | || |||||   |||| ||||||||||||| || || | ||||||||| | ||||||||||||||| || || ||||||||||    
T  11612 ttgtcagcaagagcaatgtaaggcttaggacgattctgttgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcataaa 11513  T
Q  317 tcctacaactgcttaccaattcagaaaag 345  Q
    ||||||| ||| | ||||| || ||||||    
T  11512 tcctacacctgttaaccaactccgaaaag 11484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 146; Significance: 8e-77; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 13 - 366
Target Start/End: Original strand, 51882 - 52235
Alignment:
Q  13 tcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtac 112  Q
    |||||||  ||||||||| | || | ||||||| ||||||||| ||||||   ||| || |||| ||||||||| ||||| |||||||||||   |  ||    
T  51882 tcttcatcacagttatagaaaacaacatcaccatgcttgcaataagctaaagtgtgtcctttcttaccacacctaaagcacttcttctcatctcgatcac 51981  T
Q  113 aaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgctt 212  Q
    | |||||||||||||||||||| ||||||||||||||||| | ||| ||||||||||||||||||||| | |||||| ||||||||||||  || || ||    
T  51982 atacattactcttgtggcctttctcaccacacttgaaacagataatctcagtaggagcatctctcctcctaggcctcctctcatcattcagcctctgttt 52081  T
Q  213 accgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttca 312  Q
    ||| ||||||||||| ||||||||| | |||  ||| ||||| |||||||| ||||| |||||||||||||| || |||||||| || ||||||||||||    
T  52082 acctttgtcagcaggagcactatacagtttcggacggctctgctgtcccttacctctgcgctcactcatcactttataatgagcctttgtatcctcttca 52181  T
Q  313 taaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    ||||||||||| |||||||||||||||||||  || |||||||| |||||||||    
T  52182 taaatcctacagctgcttaccaattcagaaatattccttatcttttgataacca 52235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 145; Significance: 3e-76; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 2 - 314
Target Start/End: Complemental strand, 4933 - 4621
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    |||| |||||||| || ||||||||||| ||||| | |||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||    
T  4933 tgatatggccctcctcgttgcagttataacatacaacatcaccacgcttgcaatcagctaacatgtgacccttctgtccacacctgaagcacttcttctc 4834  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    ||| || |||||||||||||||||||||||||| |  ||||||||  |||| || || |||| ||||||||||||||| || |||||| |||||||||||    
T  4833 atctttggtacaaacattactcttgtggcctttctggccacacttataacagactatctcagcaggagcatctctcctatttggcctcctctcatcattc 4734  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    | ||| ||||| || ||||||  ||||||||| ||||| ||   ||||||||| |||||||| ||||| ||||||||||||||||| ||||||| ||| |    
T  4733 agtctttgctttcccttgtcaaaaggggcactgtacggtttaggacgactctgctgtcccttacctcttcgctcactcatcaccttataatgaggttttg 4634  T
Q  302 tatcctcttcata 314  Q
    | ||||| |||||    
T  4633 tgtcctcctcata 4621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 2 - 355
Target Start/End: Complemental strand, 17568 - 17215
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    |||| ||||||||||| ||||| || || ||||| | |||||||||| || |||| |||||   ||||||||| ||| ||||||| ||||| ||||||||    
T  17568 tgatatggccctcttcgttgcaattgtaacatacaacatcaccacgcatgtaatccgctaatgtgtgacccttttgatcacacctaaagcacttcttctc 17469  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    |||||| |||||||||||||||||||||||||| || ||||||||  ||||||| || |||| ||||||||||||||| || |||||| |||||||||||    
T  17468 atccttggtacaaacattactcttgtggcctttctcgccacacttataacaaactatctcagcaggagcatctctcctattcggcctcctctcatcattc 17369  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    | ||| || || || ||||||||||||||||| ||||| ||   ||||||||| |||||||| ||||| ||||||||||||||||| ||||||||||| |    
T  17368 agtctttgttttcccttgtcagcaggggcactgtacggtttaggacgactctgctgtcccttacctcttcgctcactcatcaccttataatgagcttttg 17269  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatct 355  Q
    | ||||| ||||| ||||| ||||   ||||||| ||||| ||| |||| ||||    
T  17268 tgtcctcctcatagatcctgcaacgatttaccaaatcagagaagattctaatct 17215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 142; Significance: 2e-74; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 73 - 362
Target Start/End: Original strand, 319534 - 319823
Alignment:
Q  73 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcat 172  Q
    |||||||||||||||||||| ||||||||||| |||  ||| |||||||||||||||||||| || ||||||||| | ||||||||  ||| ||||||||    
T  319534 ttctgaccacacctgaagcacttcttctcatctttatcacagacattactcttgtggcctttctcgccacacttgtagcaaacaatcccagcaggagcat 319633  T
Q  173 ctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacg 272  Q
    ||||||| ||||||||| ||||||||||||  || |||||| | ||||||||||| |||||||||||||||  ||||||||| ||||| ||||| || ||    
T  319634 ctctcctattgggcctcctctcatcattcagcctctgcttatccttgtcagcaggagcactatacggcttcggacgactctgctgtcctttgccccttcg 319733  T
Q  273 ctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
     ||||| ||||||||||||||||||||||| ||||| |||||||| || || || |||||||||||||| |||||  |||||||||||||    
T  319734 atcacttatcaccttgtaatgagctttcgtgtcctcctcataaattctgcagctacttaccaattcagagaagttctttatcttctgata 319823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 325927 - 326151
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    |||| ||||||||||||||||||||||| || || | ||| || ||||| |||| ||||||   ||| || |||||||||||| ||||||| ||||||||    
T  325927 tgatatggccctcttcattgcagttataacaaacaacatctccccgcttacaattagctaatgtgtgtcctttctgaccacacttgaagcacttcttctc 326026  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    ||| |||  ||| ||||||||||||||| |||| || ||||||||| | |||||||| |||| ||||||||||||||| || |||||| |||||||||||    
T  326027 atctttatcacagacattactcttgtggtctttctcgccacacttgtagcaaacaatctcagcaggagcatctctcctatt-ggcctcctctcatcattc 326125  T
Q  202 aatctatgcttaccgttgtcagcagg 227  Q
    |  || |||||||| |||| ||||||    
T  326126 agcctctgcttacccttgttagcagg 326151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 225
Target Start/End: Complemental strand, 200526 - 200338
Alignment:
Q  37 atatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggccttttt 136  Q
    ||||||||||||||||| || |||| |   || || ||||  ||||| | |||||| |||||||||||   | | |||||||||||||||||||| || |    
T  200526 atatcaccacgcttgcattccgctatcgtatgccctttcttcccacatcggaagcacttcttctcatcaccattgcaaacattactcttgtggcccttct 200427  T
Q  137 caccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagca 225  Q
    ||||||||||| | |||||||| ||| ||||| | ||||| ||||| || ||| |||||||||||||||| | ||| || |||||||||    
T  200426 caccacacttgtagcaaacaatctcattaggaacttctcttctcttaggtctcctctcatcattcaatctttacttccctttgtcagca 200338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 141; Significance: 7e-74; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 2 - 362
Target Start/End: Original strand, 22342 - 22702
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    |||| |||||||||||||||||||||||||| || | ||||||||||||||||||| |||    ||| || |||||||||||| ||||||||||||||||    
T  22342 tgatatggccctcttcattgcagttatagcaaacaacatcaccacgcttgcaatcaactagggtgtgtcctttctgaccacacttgaagcatttcttctc 22441  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    |||||||||| |||||||||||||||||||||| || ||||||||| ||||||| || |||  ||||||||||||||| ||||||||| |||||||||||    
T  22442 atccttagtaaaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcaacaggagcatctctcctattgggcctcctctcatcattc 22541  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    | ||| || || || ||||| ||||||||||| || || ||   | ||||||  |||||||| || || ||| ||||||||||| | ||||||||||| |    
T  22542 agtctttgatttcctttgtcggcaggggcactgtatggtttaggaagactctactgtcccttaccccttcgcccactcatcaccatataatgagcttttg 22641  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    | ||||| ||||| || || || || |||||||| ||||| ||  ||||||||||||||||    
T  22642 tgtcctcctcatagattctgcagctacttaccaaatcagagaaaattcttatcttctgata 22702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 141; Significance: 7e-74; HSPs: 4)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 16 - 344
Target Start/End: Complemental strand, 39403 - 39075
Alignment:
Q  16 tcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaa 115  Q
    ||||||||||||||||| || | ||| || ||||| |||| ||||||   ||| || |||||||||||||||||||| ||||||||||| |||  |||||    
T  39403 tcattgcagttatagcaaacaacatctccccgcttacaattagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacaaa 39304  T
Q  116 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttacc 215  Q
    ||||||||||||||||||| |||||||||||| | |||||||| |||| ||||||||||||||||||||||||| ||||||||||||  || ||||| ||    
T  39303 cattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctctgctttcc 39204  T
Q  216 gttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataa 315  Q
     ||||||||||| |||||||| || ||   | ||||||| |||||||| ||||| || |||||||||||||||||||||||||| ||||| || |||||     
T  39203 cttgtcagcaggagcactatatggtttaggaagactctgctgtcccttacctcttcgttcactcatcaccttgtaatgagctttagtatcttcctcatat 39104  T
Q  316 atcctacaactgcttaccaattcagaaaa 344  Q
    ||||| || || || ||||| ||||||||    
T  39103 atcctgcagctactcaccaactcagaaaa 39075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 37 - 157
Target Start/End: Complemental strand, 180888 - 180768
Alignment:
Q  37 atatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggccttttt 136  Q
    ||||| ||||||||||||||||| ||||  |||||||||||||| || ||||| |||||||||||||| | ||| ||| |||||||||||||||| ||      
T  180888 atatctccacgcttgcaatcagccaacacatgacccttctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattactcttgtggcccttca 180789  T
Q  137 caccacacttgaaacaaacaa 157  Q
    ||||||| ||| |||||||||    
T  180788 caccacatttgtaacaaacaa 180768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 242
Target Start/End: Original strand, 14652 - 14884
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    ||||||||||| || ||  ||||||| ||||||  |||||||||||||||||  |  |||| |||||  ||||||| ||  ||||||||    || | |     
T  14652 ccctcttcattacaattgaagcatacgatatcattacgcttgcaatcagctacaatatgactcttcttgccacaccggacacatttcttgatctcttcaa 14751  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatg 209  Q
     ||||||||||||||||||||| || || |||||||||||||||||||| || | |||||||||  || |||| |||| | | |||||   || ||| ||    
T  14752 gacaaacattactcttgtggccattctcgccacacttgaaacaaacaatctccgcaggagcatccttcttcttaggccgcatatcatcgaccattctctg 14851  T
Q  210 cttaccgttgtcagcaggggcactatacggctt 242  Q
     || || || ||||||||||||||||| |||||    
T  14852 tttgcccttatcagcaggggcactataaggctt 14884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 362
Target Start/End: Complemental strand, 180648 - 180563
Alignment:
Q  277 ctcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    |||||||||||||||||||| ||||||||||| |||||||| || || || || |||| ||| || ||  |||| |||||||||||    
T  180648 ctcatcaccttgtaatgagccttcgtatcctcctcataaattctgcagctactcaccatttctgagaaaattctgatcttctgata 180563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 137; Significance: 2e-71; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 2 - 362
Target Start/End: Complemental strand, 164485 - 164125
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    |||| ||||| ||||||||||||||||| || || | || |||||||||||||||| ||||   ||| || ||||||||||||||||| || ||||||||    
T  164485 tgatatggccttcttcattgcagttataacaaacaacattaccacgcttgcaatcaactaaagtgtgtcctttctgaccacacctgaaacacttcttctc 164386  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    |||||||| |||||||||||||||||||||||| || ||||||||| ||||||| || |||| |||||| |||||||| ||||||||| |||||||||||    
T  164385 atccttagaacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaggagcgtctctcctattgggcctcctctcatcattc 164286  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    || || || || || ||||||||||||||||| || |  ||   ||||||||| ||||| || ||||| || ||||||||||||||||||||||||||||    
T  164285 aacctctgttttcccttgtcagcaggggcactgtatgatttaggacgactctgctgtcctttacctcttcgttcactcatcaccttgtaatgagctttcg 164186  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    | | ||| ||||| ||||| || || || ||||| || || ||  |||| |||||||||||    
T  164185 tgttctcctcatatatcctgcagctactcaccaactcggagaaaattctgatcttctgata 164125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 30549 - 30487
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatc 173  Q
    |||| |||| |||||||||||||| |||||||| || ||||| ||||| |||| |||||||||    
T  30549 acaagcattgctcttgtggcctttctcaccacaattaaaacagacaatctcagcaggagcatc 30487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 136; Significance: 7e-71; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 16 - 366
Target Start/End: Complemental strand, 12482 - 12134
Alignment:
Q  16 tcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaa 115  Q
    |||||||||||||| || || || || |||||||| |||||| ||||   ||| || |||||| ||||||| ||||| ||||||||||| |||  | |||    
T  12482 tcattgcagttataacaaacaatgtccccacgcttacaatcatctaatgtgtgtcctttctgagcacacctaaagcacttcttctcatctttacgaaaaa 12383  T
Q  116 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttacc 215  Q
    ||||||||||||||||||| || ||||||||||| ||| |  ||    ||    |||||||||||||||||||  |||||||||||| ||| ||||||||    
T  12382 cattactcttgtggcctttctcgccacacttgaagcaatctctact--taccctcatctctcctcttgggcctactctcatcattcagtctctgcttacc 12285  T
Q  216 gttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataa 315  Q
     ||||||||||| ||||| |||||||||  |||||| || | ||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||    
T  12284 cttgtcagcaggagcactgtacggcttcggacgactatgctatcccttgcctctacgatcactcatcaccttgtaatgatctttcgtatcctcctcataa 12185  T
Q  316 atcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    |||||||| ||||||||||| ||||  ||||||||||| ||||||||||||    
T  12184 atcctacagctgcttaccaaatcagtgaagtttcttattttctgataacca 12134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 16 - 366
Target Start/End: Complemental strand, 20662 - 20314
Alignment:
Q  16 tcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaa 115  Q
    |||||||||||||| || || || || |||||||| |||||| ||||   ||| || |||||| ||||||| ||||| ||||||||||| |||  | |||    
T  20662 tcattgcagttataacaaacaatgtccccacgcttacaatcatctaatgtgtgtcctttctgagcacacctaaagcacttcttctcatctttacgaaaaa 20563  T
Q  116 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttacc 215  Q
    ||||||||||||||||||| || ||||||||||| ||| |  ||    ||    |||||||||||||||||||  |||||||||||| ||| ||||||||    
T  20562 cattactcttgtggcctttctcgccacacttgaagcaatctctact--taccctcatctctcctcttgggcctactctcatcattcagtctctgcttacc 20465  T
Q  216 gttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataa 315  Q
     ||||||||||| ||||| |||||||||  |||||| || | ||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||    
T  20464 cttgtcagcaggagcactgtacggcttcggacgactatgctatcccttgcctctacgatcactcatcaccttgtaatgatctttcgtatcctcctcataa 20365  T
Q  316 atcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    |||||||| ||||||||||| ||||  ||||||||||| ||||||||||||    
T  20364 atcctacagctgcttaccaaatcagtgaagtttcttattttctgataacca 20314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1056 (Bit Score: 134; Significance: 1e-69; HSPs: 1)
Name: scaffold1056
Description:

Target: scaffold1056; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 10 - 366
Target Start/End: Original strand, 1949 - 2303
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    ||||||||||  || ||||||||||| | ||| |||||||| |||||||||||    || || ||||| |||||||| ||||| ||||||||||| |  |    
T  1949 ccctcttcatcacaattatagcatacaacatc-ccacgcttacaatcagctaaagtatgtcctttctgtccacacctaaagcacttcttctcatc-tcgg 2046  T
Q  110 t-acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctat 208  Q
    | ||| |||||||||||||||||||| |||||||||||||| |||| ||| |||||||||||||||| |||||| |||||| ||||||||||||  || |    
T  2047 tcacacacattactcttgtggcctttctcaccacacttgaagcaaataatttcagtaggagcatctcacctcttaggcctcctctcatcattcagcctct 2146  T
Q  209 gcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctc 308  Q
    | ||||| ||||||||||  |||||| |||| |||  ||||||||  | |||||| ||||| |||||||||||||| || ||||||||||| ||||||||    
T  2147 gtttacctttgtcagcagaagcacta-acggtttcggacgactctactatcccttacctctgcgctcactcatcactttataatgagcttttgtatcctc 2245  T
Q  309 ttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    |||||| || ||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  2246 ttcatagattctacagctgcttactaattcagaaaaatttcttatcttctgataacca 2303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 134; Significance: 1e-69; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 2 - 359
Target Start/End: Original strand, 8834 - 9191
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    |||| ||||| ||||| |||||||| ||||| || || ||||||||||||||||||||||    ||| || ||||||||||||||||| || ||||||||    
T  8834 tgatatggccttcttcgttgcagttgtagcaaacaatgtcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctc 8933  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    ||| |||||||||||||||||||||||||| || || ||||||||  |||||||||| |||  ||||||||||||||||||||| ||  |||||||||||    
T  8934 atctttagtacaaacattactcttgtggccattctcgccacacttataacaaacaatctcatcaggagcatctctcctcttgggtcttctctcatcattc 9033  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    |   | ||||| || ||||||||||| |||||||||||||||  ||||||||| ||||| ||||  || || |||||||||||||  ||||||| |||||    
T  9034 agcttctgcttccctttgtcagcaggagcactatacggcttcggacgactctgctgtcctttgctccttcgatcactcatcacctaataatgagatttcg 9133  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctg 359  Q
    | ||||| ||||| ||  | || || |||||||||||||| |||||| | ||||||||    
T  9134 tgtcctcctcatagattatgcagctacttaccaattcagagaagtttttgatcttctg 9191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 133; Significance: 4e-69; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 10 - 366
Target Start/End: Complemental strand, 43495 - 43139
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    ||||||||||  || |||||||| || | ||| |||||||| |||||||||||   ||| || ||||| |||||||| ||||| |||||||||||   |     
T  43495 ccctcttcatcacaattatagcaaacaacatccccacgcttacaatcagctaaagtgtgtcctttctgtccacacctaaagcacttcttctcatctcgat 43396  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatg 209  Q
     ||| ||||||||||||||||| ||||||| |||||||||||| ||||| ||| ||||||||||||||||||| |||||| ||||||||||||  || ||    
T  43395 cacacacattactcttgtggcccttttcacgacacttgaaacagacaatctcattaggagcatctctcctcttaggcctcctctcatcattcagcctctg 43296  T
Q  210 cttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctct 309  Q
     ||||| |||| || ||| ||||||||| | ||   |||||||||||||||||| ||||| ||||||||||||||||||||||||  ||| |||||||||    
T  43295 tttacctttgttagaaggagcactatacagttttggacgactctgttgtcccttacctctgcgctcactcatcaccttgtaatgacatttggtatcctct 43196  T
Q  310 tcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    | ||| |||||||| ||||||||||| || || || || |||||||| |||||||||    
T  43195 taatatatcctacagctgcttaccaaatctgagaaattccttatcttttgataacca 43139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 133; Significance: 4e-69; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 2 - 362
Target Start/End: Complemental strand, 53507 - 53147
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    |||| |||||||||||||| |||||||| ||||| |  |||||||||||||||||| |||  | ||| || || |||||||||||||| |||||||||||    
T  53507 tgatatggccctcttcattacagttataacataccacgtcaccacgcttgcaatcaactaggatgtgtcctttttgaccacacctgaatcatttcttctc 53408  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    ||||||||||||||||||||||||||||||||| || ||||||||| ||||||| ||  ||| | ||||||||||||| ||||||||| |||||||||||    
T  53407 atccttagtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatcccagcaagagcatctctcctattgggcctcctctcatcattc 53308  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    ||||| ||||| || ||||||||||||||||| || || ||   ||||   || ||||||||  |||| ||||||||||||||||| |||||||| || |    
T  53307 aatctctgctttcccttgtcagcaggggcactgtatggtttaggacgaacttgatgtcccttatctcttcgctcactcatcaccttataatgagccttgg 53208  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    | || || ||||| ||||| || || || ||||| || || ||| |||| ||||| |||||    
T  53207 tgtcttcctcatatatcctgcagctactcaccaaatccgagaagattctaatcttttgata 53147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 16 - 299
Target Start/End: Complemental strand, 354 - 71
Alignment:
Q  16 tcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaa 115  Q
    |||||||||||||| || || || || |||||||| ||||||||||    ||| |  |||||||||||| ||||||| |||||||||||  ||  ||| |    
T  354 tcattgcagttataacaaacaatgtccccacgcttacaatcagctagtgtgtgtcttttctgaccacacatgaagcacttcttctcatctctatcacaga 255  T
Q  116 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttacc 215  Q
    ||||||||||||||||||| || ||||||||||| |||||||||||||||||||| ||||| |||||||||||| |||||||||| || || ||||||||    
T  254 cattactcttgtggcctttctcgccacacttgaagcaaacaatatcagtaggagcctctctgctcttgggcctcctctcatcatttaacctctgcttacc 155  T
Q  216 gttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttt 299  Q
     ||||||||||| ||| | |||||||||  ||||||||| |||||||||||||| || ||||||||||||||||||||||||||    
T  154 cttgtcagcaggagcattttacggcttcggacgactctgctgtcccttgcctctgcgttcactcatcaccttgtaatgagcttt 71  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 131; Significance: 7e-68; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 79 - 341
Target Start/End: Original strand, 29824 - 30086
Alignment:
Q  79 ccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcc 178  Q
    ||||||| ||| || ||||||||||| |   |||||||||||||||||||||| |||||||||||||||||| | || || ||| |||||||||||||||    
T  29824 ccacaccggaaacacttcttctcatcatggttacaaacattactcttgtggcccttttcaccacacttgaaatagactatctcaataggagcatctctcc 29923  T
Q  179 tcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcact 278  Q
    || | |||||| |||||||||||| ||| |||||||| ||||||||||| |||||| |||| |||  ||||||||| |||||||||||||||||||||||    
T  29924 tcctaggcctcctctcatcattcagtctctgcttacctttgtcagcaggagcactagacggtttcggacgactctgctgtcccttgcctctacgctcact 30023  T
Q  279 catcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcaga 341  Q
    ||||||||| |||||||| || |||||||||||||| || |||||||| || ||||| |||||    
T  30024 catcaccttataatgagcctttgtatcctcttcatagattctacaactactcaccaaatcaga 30086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 73 - 362
Target Start/End: Complemental strand, 558 - 269
Alignment:
Q  73 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcat 172  Q
    |||||||||||||||||||| ||||||||||| || |||||||||||||| ||||||||||| || |||||||| || ||||| || |||||||||||||    
T  558 ttctgaccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatctcagtaggagcat 459  T
Q  173 ctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacg 272  Q
    ||||||||||||| ||  ||||||||||||  |  ||||| || ||||||||||||| ||| ||||||||   |||||||||||||||||| || || ||    
T  458 ctctcctcttgggtcttctctcatcattcagccgttgctttcccttgtcagcagggggactgtacggcttaggacgactctgttgtcccttacccctccg 359  T
Q  273 ctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    ||||||||||||||||||||||||||| | ||| || || || || || || ||||||||||| ||||||||  |||| |||||||||||    
T  358 ctcactcatcaccttgtaatgagcttttgaatcttcctcgtagattctgcagctgcttaccaactcagaaaaagttctgatcttctgata 269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 2 - 362
Target Start/End: Original strand, 2851 - 3205
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    |||| |||||||| ||||||||||||||||| ||||| || || ||||| |||||||||||   ||| |||||||| |||||||||||| | ||||||||    
T  2851 tgatatggccctcctcattgcagttatagcaaactatgtctccccgcttacaatcagctaatgtgtgtcccttctgtccacacctgaagaacttcttctc 2950  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    ||| |||  |||||||||||||||||||||||| | |||||||||| | |||||||| |||  ||||||||||||||||||||||||| |||||||||||    
T  2951 atctttatcacaaacattactcttgtggcctttcttaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctctcatcattc 3050  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    || || || || || ||||||||||| ||||||||||| ||   | ||||||| ||||  || |||||      || ||||||||||||||||||||| |    
T  3051 aacctctgttttcctttgtcagcaggagcactatacggtttaggatgactctgctgtcatttacctct------acacatcaccttgtaatgagctttag 3144  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    |||| |||||||| ||||| || || || ||||| ||||| ||  ||||||||||||||||    
T  3145 tatcttcttcatatatcctgcagctactcaccaaatcagagaaaattcttatcttctgata 3205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530 (Bit Score: 126; Significance: 7e-65; HSPs: 1)
Name: scaffold1530
Description:

Target: scaffold1530; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 77 - 362
Target Start/End: Original strand, 799 - 1084
Alignment:
Q  77 gaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctct 176  Q
    |||||||||||||| | ||||||||||| |||  ||| |||||||||||||||||||| |  ||||||||| | |||||||| |||| ||||||||||||    
T  799 gaccacacctgaagtacttcttctcatctttatcacagacattactcttgtggcctttctagccacacttgtagcaaacaatctcagcaggagcatctct 898  T
Q  177 cctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctca 276  Q
    |||||| |||||| |||||||||||||||| |||||||| ||||||||||| |||||||| || ||   |||||||||||||||||| ||||| ||||||    
T  899 cctcttaggcctcctctcatcattcaatctctgcttacccttgtcagcaggagcactatatggtttaggacgactctgttgtcccttacctctgcgctca 998  T
Q  277 ctcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    |||||||||||||||||||| ||  ||||||| ||||| || || || || || ||||| ||||| ||  |||| |||||||||||    
T  999 ctcatcaccttgtaatgagccttattatcctcctcatatattctgcagctactcaccaactcagagaaaattctaatcttctgata 1084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1299 (Bit Score: 126; Significance: 7e-65; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 73 - 362
Target Start/End: Complemental strand, 1861 - 1572
Alignment:
Q  73 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcat 172  Q
    |||||||||||||||||||| ||||||||||| || |||||||||||||| ||||||||||| || ||||||||  | ||||  || |||| || |||||    
T  1861 ttctgaccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttatagcaaattatttcagcagtagcat 1762  T
Q  173 ctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacg 272  Q
    ||||||||||||||||  |||||||||||| ||  ||||| || ||||||||||||||||| ||||||||   ||||||||||| |||||| || || ||    
T  1761 ctctcctcttgggccttctctcatcattcagtcgttgctttcccttgtcagcaggggcactgtacggcttaggacgactctgttttcccttacccctccg 1662  T
Q  273 ctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    ||||||||||||||||||||||||||| | ||| || ||||| || || || ||||||||||| ||||||||  |||| |||||||||||    
T  1661 ctcactcatcaccttgtaatgagcttttgaatcttcctcatagattctgcagctgcttaccaactcagaaaaagttctgatcttctgata 1572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 125; Significance: 3e-64; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 2 - 362
Target Start/End: Complemental strand, 5293 - 4933
Alignment:
Q  2 tgatgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctc 101  Q
    |||| |||||||| ||||||||||||||||| || | ||| |  ||||| |||||||||||   ||| ||||||||||||||||||||||| ||||||||    
T  5293 tgatatggccctcctcattgcagttatagcaaacaacatctctccgcttacaatcagctaaagtgtgtcccttctgaccacacctgaagcacttcttctc 5194  T
Q  102 atccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattc 201  Q
    |||||||  ||| ||||||||||||||||||||||| ||||||||| | |||||||| |||| |||||||||||||||| | |||| | |||||| ||||    
T  5193 atccttatcacagacattactcttgtggcctttttcgccacacttgtagcaaacaatctcagcaggagcatctctcctcctaggccacctctcattattc 5094  T
Q  202 aatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcg 301  Q
    |  || ||||| || ||||||||||| |||||||| || ||   ||||||||  | ||| || ||||| || |||||||||||||||||||||||||| |    
T  5093 agcctttgctttcccttgtcagcaggagcactatatggtttaggacgactctactttcctttacctcttcgttcactcatcaccttgtaatgagctttag 4994  T
Q  302 tatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    | || || ||||| ||| | || || || ||||||||||| ||  |||| |||||||||||    
T  4993 tgtcttcctcatatatcatgcagctactcaccaattcagagaaaattctaatcttctgata 4933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517 (Bit Score: 122; Significance: 2e-62; HSPs: 1)
Name: scaffold1517
Description:

Target: scaffold1517; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 13 - 362
Target Start/End: Complemental strand, 1560 - 1211
Alignment:
Q  13 tcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtac 112  Q
    |||||||||||||| ||||| || || || |||| ||| || |||||||    ||| ||||||| ||||||||| || |||||| || ||||  ||  ||    
T  1560 tcttcattgcagttgtagcaaacaatgtccccacacttacattcagctagggtgtgtcccttctaaccacacctaaaacatttcctcacatctctaccac 1461  T
Q  113 aaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgctt 212  Q
    || |||| ||||||||||||||||||||||||||| |||| ||||| |||| ||||||||||||||||||||||||| | |||||||||| | | || ||    
T  1460 aagcattgctcttgtggcctttttcaccacacttgtaacagacaatctcagcaggagcatctctcctcttgggcctcctatcatcattcattttctgttt 1361  T
Q  213 accgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttca 312  Q
     || ||||||||||| ||||| || |||||   ||||||||| |||||||| ||||| | ||||||||||||||||||||||||||| || || || |||    
T  1360 tcccttgtcagcaggagcactgtaaggcttaggacgactctgctgtcccttacctctcctctcactcatcaccttgtaatgagcttttgtgtcttcctca 1261  T
Q  313 taaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    || |||||||| ||||||||||| ||||| |||  ||| |||||||||||    
T  1260 tatatcctacagctgcttaccaactcagagaagactctgatcttctgata 1211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1426 (Bit Score: 121; Significance: 6e-62; HSPs: 1)
Name: scaffold1426
Description:

Target: scaffold1426; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 10 - 362
Target Start/End: Complemental strand, 1683 - 1331
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    |||||| |||||||||| ||||| |  || || ||||||||||| ||||||||   ||| ||||||||||||||||||||||| ||| ||||||| |||     
T  1683 ccctctccattgcagttgtagcagataatgtccccacgcttgcattcagctaaactgtgtcccttctgaccacacctgaagcacttcctctcatctttac 1584  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatg 209  Q
     |||||||||||||||||| ||||| |||||||||||| |||||||||| |||| |||||||||||||||||| |||||| | |||||| |||   | ||    
T  1583 cacaaacattactcttgtgtcctttctcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcactcatcttctg 1484  T
Q  210 cttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctct 309  Q
    ||| || ||||||||||| ||||| || ||||| | |||| |||| |||||||| || || | ||||||||| |  |||||||||||||| || || |||    
T  1483 ctttcctttgtcagcaggagcactgtaaggcttatgacgattctgctgtcccttacccctcctctcactcattatgttgtaatgagctttggtgtcttct 1384  T
Q  310 tcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    |||||||| ||||| ||| | ||||| ||||| |||  |||||||| ||||||    
T  1383 tcataaattctacacctgttaaccaactcagagaagactcttatctgctgata 1331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 121; Significance: 6e-62; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 7 - 362
Target Start/End: Complemental strand, 9851 - 9498
Alignment:
Q  7 tggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatcct 106  Q
    |||||||| ||||||||||||||||| || | ||| || ||||| |||||| |||    ||| || |||||||||||||||||||| |||||||||||||    
T  9851 tggccctcctcattgcagttatagcaaacaacatctccccgcttacaatcaactagggtgtgtcctttctgaccacacctgaagcacttcttctcatcct 9752  T
Q  107 tagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatct 206  Q
    ||  ||| ||||||||||||||||| || |||||||||||| | ||||||||||||| ||||||||||||||| || |||||| ||||||||||||  ||    
T  9751 tatcacagacattactcttgtggcccttctcaccacacttgtagcaaacaatatcagcaggagcatctctcctgtttggcctcctctcatcattcatcct 9652  T
Q  207 atgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcc 306  Q
     ||||| || || |||||| | |||||||| || ||   | ||||||| ||||| || ||||| || |||||||||||||||||| |||| || ||||||    
T  9651 ttgctttcccttatcagcaagagcactatatggtttaggatgactctgctgtcctttacctcttcgttcactcatcaccttgtaaagagccttagtatcc 9552  T
Q  307 tcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    || ||||  ||||| || || || ||||| ||||| ||| ||||||||||||||||    
T  9551 tcctcat--atcctgcagctactcaccaactcagagaagattcttatcttctgata 9498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 345
Target Start/End: Complemental strand, 23742 - 23686
Alignment:
Q  289 taatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaag 345  Q
    |||||||| || |||||||| ||||||||||| |||||||||||||  |||||||||    
T  23742 taatgagccttggtatcctcctcataaatcctgcaactgcttaccagctcagaaaag 23686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 121; Significance: 6e-62; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 10 - 362
Target Start/End: Original strand, 689 - 1041
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    |||||| |||||||||| ||||| || || || |||||||| || ||||||||   ||||||||||||||| ||||||||||| ||| ||||||| |||     
T  689 ccctctccattgcagttgtagcagacaatgtccccacgcttacattcagctaaattgtgacccttctgaccgcacctgaagcacttcctctcatctttac 788  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatg 209  Q
     ||||||||| ||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||| |||||| | |||||| ||||  | |     
T  789 cacaaacattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcaatcaacttcta 888  T
Q  210 cttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctct 309  Q
    ||| || ||||||||||| ||||| || |||||   |||| |||| |||||||| || || | ||||||||| | ||||||||||||||| || || |||    
T  889 ctttcctttgtcagcaggagcactgtaaggcttaggacgattctgctgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttct 988  T
Q  310 tcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    |||||||| || || ||| | ||||| ||||| ||| |||| |||| ||||||    
T  989 tcataaattctgcatctgttaaccaactcagagaagattctgatctgctgata 1041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 119; Significance: 1e-60; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 16 - 362
Target Start/End: Original strand, 5287 - 5633
Alignment:
Q  16 tcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaa 115  Q
    |||||||||||||| || || |  || || ||||| |||| ||||||   ||| || |||| ||||||||||||||| ||||||||||| |||  ||| |    
T  5287 tcattgcagttataacaaacaacgtctccccgcttacaattagctaatgtgtgtcctttctaaccacacctgaagcacttcttctcatctttatcacaga 5386  T
Q  116 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttacc 215  Q
    |||||||| |||||||||| || || |||||| | |||||||| |||| |||||||||||||||| |||||||| ||||||||||||| || || || ||    
T  5387 cattactcctgtggcctttctcgccgcacttgtagcaaacaatctcagcaggagcatctctcctcgtgggcctcctctcatcattcaacctctgttttcc 5486  T
Q  216 gttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataa 315  Q
     || |||||||| |||||||| || ||   ||||||||||||||| || ||||| || |||||||||||||||||||||||||| ||||| ||||||||     
T  5487 cttatcagcaggagcactatatggtttaggacgactctgttgtcctttacctcttcgttcactcatcaccttgtaatgagctttagtatcttcttcatat 5586  T
Q  316 atcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    ||||| || || || ||||| ||||| ||  ||||||||||||||||    
T  5587 atcctgcagctactcaccaactcagagaaaattcttatcttctgata 5633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 10 - 362
Target Start/End: Original strand, 11205 - 11557
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    ||||||||||||||||| ||||| || || || |||||||| || |||||||    ||| ||||||||||||||||||||||| ||| |||||||  ||     
T  11205 ccctcttcattgcagttgtagcagacaatgtccccacgcttacattcagctagtgcgtgtcccttctgaccacacctgaagcacttcctctcatctctac 11304  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatg 209  Q
     |||| |||| ||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||| || ||| | |||||||||||  | ||    
T  11305 cacaagcattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggactcctatcatcattcaaaatctg 11404  T
Q  210 cttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctct 309  Q
    ||| || ||||||||||| |||||||| |||||   |||| |||| || ||||| || || | ||||||||| | ||||||||||||||| || || ||     
T  11405 ctttcctttgtcagcaggagcactataaggcttaggacgaatctgctgacccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcc 11504  T
Q  310 tcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    ||||||||||| || ||| ||||||| ||||| |||  ||| |||| ||||||    
T  11505 tcataaatcctgcagctgtttaccaactcagagaagactctgatctgctgata 11557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 4 - 366
Target Start/End: Original strand, 5824 - 6186
Alignment:
Q  4 atgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcat 103  Q
    ||||| ||||||||||  || ||||| || || | ||| ||||||||||||||||||||   ||| || ||||| ||||| ||||| || ||||||| ||    
T  5824 atgtgtccctcttcatcacaattataacaaacaacatccccacgcttgcaatcagctaatgtgtgtcctttctgtccacatctgaaacacttcttcttat 5923  T
Q  104 ccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaa 203  Q
    |   |  ||| |||||||||||||||||||| ||||||||||||||| | ||| | ||| |||| |||||||||||| | |||||| ||||||||||||     
T  5924 ctcaatcacacacattactcttgtggcctttctcaccacacttgaaatagacagtctcattaggggcatctctcctcctaggcctcctctcatcattcag 6023  T
Q  204 tctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgta 303  Q
      | || || || ||||||||||| ||||||||||| |||  ||||||||| || ||||| ||||| |||||||||||||| || |||||||||||||||    
T  6024 catctgttttcctttgtcagcaggagcactatacggtttcggacgactctgctgacccttacctctgcgctcactcatcactttataatgagctttcgta 6123  T
Q  304 tcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    ||||||||||| || ||| | ||||||||||| || || || || |||||||| |||||||||    
T  6124 tcctcttcatatattctaaagctgcttaccaaatccgagaaattccttatcttttgataacca 6186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 111; Significance: 6e-56; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 16 - 362
Target Start/End: Complemental strand, 9091 - 8745
Alignment:
Q  16 tcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaa 115  Q
    ||||||||||||||||| || | ||| || ||||| |||| ||||||   ||| || |||||||||||||||||||| |||||||||||||||  ||| |    
T  9091 tcattgcagttatagcaaacaacatctccccgcttacaattagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatccttatcacaga 8992  T
Q  116 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttacc 215  Q
    ||||||||||||||| ||| |||||||||||| | |||||||| | || || |||||||||||||||||||||| ||||||||||||  || ||||| ||    
T  8991 cattactcttgtggcttttctcaccacacttgtagcaaacaatcttagcagaagcatctctcctcttgggcctcctctcatcattcagcctctgctttcc 8892  T
Q  216 gttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataa 315  Q
     ||||| ||||| |||||||| || || | || |||||| | ||| || ||||| || |||||||| ||||||| ||||||||| ||||| || |||||     
T  8891 cttgtctgcaggagcactatatggtttatgacaactctgctatcctttacctcttcgttcactcataaccttgtcatgagctttagtatcttcctcatat 8792  T
Q  316 atcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    ||||| || || || ||||| ||||| ||  |||| | |||||||||    
T  8791 atcctgcagctactcaccaactcagagaaaattctaaccttctgata 8745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 110; Significance: 2e-55; HSPs: 4)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 17 - 242
Target Start/End: Original strand, 115797 - 116022
Alignment:
Q  17 cattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaac 116  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||| || ||||||||    
T  115797 cattgcaattatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgtccacacctgaagcacttcttctcatctttggtacaaac 115896  T
Q  117 attactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccg 216  Q
    |||||| ||||||||||| || |||||||| || ||||| || |||| |||||  ||||| | |||||||||  |||||||||||| ||  ||||| ||     
T  115897 attacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctcttcccttgggccttctctcatcattcagtcgttgctttccc 115996  T
Q  217 ttgtcagcaggggcactatacggctt 242  Q
    ||  |||||||||| || ||||||||    
T  115997 ttaccagcaggggcgctgtacggctt 116022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 37 - 157
Target Start/End: Complemental strand, 93943 - 93823
Alignment:
Q  37 atatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggccttttt 136  Q
    ||||| |||||||||||||| || ||||  ||||| |||||||| || ||||| |||||||||||||| | ||| ||| |||||||||||||||| ||      
T  93943 atatctccacgcttgcaatccgccaacacatgacctttctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattactcttgtggcccttca 93844  T
Q  137 caccacacttgaaacaaacaa 157  Q
    ||||||| ||| |||||||||    
T  93843 caccacatttgtaacaaacaa 93823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 362
Target Start/End: Complemental strand, 93703 - 93618
Alignment:
Q  277 ctcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    |||||||||||||||||||| ||||||||||| |||||||| || || || || |||||||| || ||  |||| |||||||||||    
T  93703 ctcatcaccttgtaatgagccttcgtatcctcctcataaattctgcagctactcaccaattctgagaaaattctgatcttctgata 93618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 320
Target Start/End: Complemental strand, 107643 - 107543
Alignment:
Q  220 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 319  Q
    ||||| |||||||| ||||||||   |||||||||||||||||||||  | | |||| |||  | || ||| ||||| ||||||||||||||||| ||||    
T  107643 tcagcgggggcactgtacggcttaggacgactctgttgtcccttgcccttcctctcattcactatctcgtagtgagccttcgtatcctcttcatagatcc 107544  T
Q  320 t 320  Q
    |    
T  107543 t 107543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 109; Significance: 9e-55; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 10 - 362
Target Start/End: Complemental strand, 514429 - 514077
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    |||||| |||||||||| ||||| || || || |||| ||| || |||| |||   ||| ||||||||||||||||||||||| ||| |||| || |||     
T  514429 ccctctccattgcagttgtagcagacaatgtccccacacttacattcagttaagctgtgtcccttctgaccacacctgaagcacttcctctcgtctttac 514330  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatg 209  Q
     ||||||||| |||||||||||||| |||||||||||| |||||||||| |||| |||||||||||||||||| |||||| | ||||||||||   | |     
T  514329 cacaaacattgctcttgtggcctttctcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattcatcttctt 514230  T
Q  210 cttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctct 309  Q
    ||| || ||||||||||| ||||| || |||||   |||| |||| |||||||| || || | ||||||||| | ||||||||||||||| || || |||    
T  514229 ctttcctttgtcagcaggagcactttaaggcttaggacgattctgctgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttct 514130  T
Q  310 tcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    |||||||| ||||| ||| ||||||| ||||| |||  ||| |||| ||||||    
T  514129 tcataaattctacacctgtttaccaactcagagaagactctgatctgctgata 514077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 347
Target Start/End: Original strand, 442154 - 442217
Alignment:
Q  284 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtt 347  Q
    |||||||||||||||| ||||| || ||||| || ||||| ||||| |||| ||||||||||||    
T  442154 ccttgtaatgagctttagtatcttcctcatagattctacagctgctcaccagttcagaaaagtt 442217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 108; Significance: 4e-54; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 115 - 366
Target Start/End: Complemental strand, 1243 - 992
Alignment:
Q  115 acattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttac 214  Q
    ||||||| ||||||||||||||||||||| || ||||| ||||| | ||||||||||||||||||| | |||||| |||||||||||| ||| |||||||    
T  1243 acattacccttgtggcctttttcaccacatttaaaacagacaatcttagtaggagcatctctcctcctaggcctcctctcatcattcagtctctgcttac 1144  T
Q  215 cgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcata 314  Q
    | |||||| |||| ||||||||||| |||  ||||||||| |||||||| ||||| ||||||||||||||||| ||||||||||| || ||||| |||||    
T  1143 ccttgtcaacaggagcactatacggtttcggacgactctgctgtcccttacctctgcgctcactcatcaccttataatgagcttttgtgtcctcctcata 1044  T
Q  315 aatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
     || || || || || ||||| ||||| || || |||||||| || ||||||    
T  1043 tattctgcagctactcaccaaatcagagaaattccttatcttttggtaacca 992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 108; Significance: 4e-54; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 115 - 366
Target Start/End: Complemental strand, 28256 - 28005
Alignment:
Q  115 acattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttac 214  Q
    ||||||| ||||||||||||||||||||| || ||||| ||||| | ||||||||||||||||||| | |||||| |||||||||||| ||| |||||||    
T  28256 acattacccttgtggcctttttcaccacatttaaaacagacaatcttagtaggagcatctctcctcctaggcctcctctcatcattcagtctctgcttac 28157  T
Q  215 cgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcata 314  Q
    | |||||| |||| ||||||||||| |||  ||||||||| |||||||| ||||| ||||||||||||||||| ||||||||||| || ||||| |||||    
T  28156 ccttgtcaacaggagcactatacggtttcggacgactctgctgtcccttacctctgcgctcactcatcaccttataatgagcttttgtgtcctcctcata 28057  T
Q  315 aatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
     || || || || || ||||| ||||| || || |||||||| || ||||||    
T  28056 tattctgcagctactcaccaaatcagagaaattccttatcttttggtaacca 28005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 106; Significance: 6e-53; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 121 - 362
Target Start/End: Complemental strand, 33337 - 33096
Alignment:
Q  121 ctcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgt 220  Q
    |||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||| ||||||||||||  || || || || ||||    
T  33337 ctcttgtggcctttttcaccacacttgaaacaaacaatttcaacaggagcatctctcctcttgggcctcctctcatcattcatcctctgttttcctttgt 33238  T
Q  221 cagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcct 320  Q
    ||||||| ||||| || || ||   ||||||||| |||||||| || || ||||||||||||||||||||||||||||| || || || ||||| |||||    
T  33237 cagcaggagcactgtatggtttaggacgactctgctgtcccttaccccttcgctcactcatcaccttgtaatgagctttggtgtcttcctcatatatcct 33138  T
Q  321 acaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
     || ||||||||||| ||||| ||  |||| ||||| |||||    
T  33137 gcagctgcttaccaactcagagaaaattctaatcttttgata 33096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 10 - 176
Target Start/End: Complemental strand, 930 - 764
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    |||||||||||||||||||| || || |||||||||||||||||||||||||    ||| || |||||||||||||||||||| ||||||||||| ||||    
T  930 ccctcttcattgcagttataacaaacaatatcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctttag 831  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctct 176  Q
    |||||||||||||||| |||||||| |  ||||||||| |||||||||| |||| ||||||||||||    
T  830 tacaaacattactcttatggcctttcttgccacacttgtaacaaacaatctcagcaggagcatctct 764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 217 - 362
Target Start/End: Complemental strand, 3920 - 3775
Alignment:
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 316  Q
    ||||||||||| |||||||||||||||  ||||||||| ||||| ||||  || || ||||||||||||||||||||||||||||| ||||| ||||| |    
T  3920 ttgtcagcaggagcactatacggcttcggacgactctgctgtcctttgctccttcgatcactcatcaccttgtaatgagctttcgtgtcctcctcataga 3821  T
Q  317 tcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    | || || || |||||||||||||| ||||| || |||||||||||    
T  3820 ttctgcagctacttaccaattcagagaagttcctgatcttctgata 3775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 94; Significance: 8e-46; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 17 - 314
Target Start/End: Original strand, 41970 - 42267
Alignment:
Q  17 cattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaac 116  Q
    |||||||||| || || || || || ||||||||||| ||||||||   ||||||||||||||||||||||||||| ||| | |||||  |   ||||||    
T  41970 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 42069  T
Q  117 attactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccg 216  Q
    |||||||||||||||||| |||||||||||| | |||||||| |||  ||||||||||||||||||||||||| | ||||||  ||   | ||||| ||     
T  42070 attactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcct 42169  T
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcata 314  Q
    ||||||||||| ||||| || |||||   |||| ||||||||||||| || || | ||||||||| | ||| ||||||||||| || || ||||||||    
T  42170 ttgtcagcaggagcactgtaaggcttaggacgattctgttgtcccttacccctcctctcactcataatcttataatgagctttggtgtcttcttcata 42267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 94; Significance: 8e-46; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 13 - 362
Target Start/End: Original strand, 251850 - 252199
Alignment:
Q  13 tcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtac 112  Q
    ||||| |||||||| ||||| || || || |||||||| || |||||||    ||| || |||||||||||||| || |||||| |||||||  ||  ||    
T  251850 tcttcgttgcagttttagcaaacaatgtctccacgcttacattcagctagtgtgtgtcctttctgaccacacctaaaacatttcctctcatctctaccac 251949  T
Q  113 aaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgctt 212  Q
    || |||  || ||||||||||||||||||||||||||||| ||||| |||  | ||||||||||||||||||||||| | ||||||||||   |||| ||    
T  251950 aagcatagcttttgtggcctttttcaccacacttgaaacacacaatctcaacaagagcatctctcctcttgggcctcctatcatcattcatcttatgttt 252049  T
Q  213 accgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttca 312  Q
     ||  || ||||||| ||||| || || ||   |||| | ||||||||||| || || | ||||||||||||||||||||||||||| || || || |||    
T  252050 tcctgtggcagcaggagcactgtaaggtttaggacgattatgttgtcccttacccctcctctcactcatcaccttgtaatgagctttggtgtcttcctca 252149  T
Q  313 taaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    || ||||| || ||||||||||||||||| ||  |||| |||||||||||    
T  252150 tatatcctgcagctgcttaccaattcagagaaaattctaatcttctgata 252199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 229827 - 229765
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatc 173  Q
    ||||||||| |||||||||||||| |||||||| |||||||||||||| || | |||||||||    
T  229827 acaaacattgctcttgtggcctttctcaccacaattgaaacaaacaatctccgcaggagcatc 229765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1845 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold1845
Description:

Target: scaffold1845; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 85 - 362
Target Start/End: Complemental strand, 1305 - 1028
Alignment:
Q  85 ctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgg 184  Q
    |||||||| ||| |||||||  ||  ||||||||| |||||||||||||| |||||||||||| |||||||||| |||| ||||||||||||||||||||    
T  1305 ctgaagcacttcctctcatctctaccacaaacattgctcttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgg 1206  T
Q  185 gcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcac 284  Q
    | ||| | ||||||||||   | ||||| || ||||||||||| ||||| || |||||   |||| |||  |||||||| || || | ||||||||| |     
T  1205 gtctcctatcatcattcatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattcttctgtccctttcccctcctctcactcattat 1106  T
Q  285 cttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    ||||||||||||||| || || ||||| |||||||| |||||| ||||||| ||||| |||  ||| |||| ||||||    
T  1105 cttgtaatgagctttggtgtcttcttcgtaaatcctgcaactgtttaccaactcagagaagaatctgatctgctgata 1028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2165 (Bit Score: 89; Significance: 8e-43; HSPs: 1)
Name: scaffold2165
Description:

Target: scaffold2165; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 10 - 362
Target Start/End: Complemental strand, 879 - 527
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    |||||| |||| ||||||||||| || || || |||||||| || ||||||||   ||| ||||| ||||||||||||||||| ||| |||| || |||     
T  879 ccctctccatttcagttatagcagacaatgtccccacgcttacattcagctaaactgtgtcccttttgaccacacctgaagcacttcctctcgtctttac 780  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatg 209  Q
     ||||||||| |||||||||||||| |||||| ||||| |||||||||| |||| |||||||||||||||||| |||||| | ||||||||||   | ||    
T  779 cacaaacattgctcttgtggcctttctcaccaaacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattcatcttctg 680  T
Q  210 cttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctct 309  Q
    ||| || ||||||  ||| ||||| || |||||   |||| |||| |||||||| || || | || |||||| | |||||||| | |||| || || |||    
T  679 ctttcctttgtcaataggagcactgtaaggcttaggacgattctgctgtcccttacccctcctctaactcattatcttgtaataaactttggtgtcttct 580  T
Q  310 tcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    |||||||| ||||| ||| | ||||| ||||| |||  ||| |||| ||||||    
T  579 tcataaattctacacctgttaaccaactcagagaagactctaatctgctgata 527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 89; Significance: 8e-43; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 17 - 341
Target Start/End: Complemental strand, 67177 - 66853
Alignment:
Q  17 cattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaac 116  Q
    |||||||||| ||||| || || || ||| |||| || |||||||    ||| ||||| |||||||||||||| |||||| ||||||   ||  ||||||    
T  67177 cattgcagttgtagcagacaatgtccccaagcttacattcagctaggttgtgtcccttttgaccacacctgaaacatttcctctcatgtctaccacaaac 67078  T
Q  117 attactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccg 216  Q
    ||| ||||||||||||||||||||||||||  |||||||||| || | ||||||||||||||||||||| ||| | ||||||||||   | | ||| ||     
T  67077 attgctcttgtggcctttttcaccacacttataacaaacaatctcggaaggagcatctctcctcttgggtctcctatcatcattcatcatctactttcct 66978  T
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 316  Q
    |||||| |||| ||||| || |||||   |||| |||| ||||||||||| || | ||||||||| | ||||||||||||||| || || || |||||||    
T  66977 ttgtcaacaggagcactgtaaggcttaggacgattctgctgtcccttgcccctcctctcactcattatcttgtaatgagctttggtgtcttcctcataaa 66878  T
Q  317 tcctacaactgcttaccaattcaga 341  Q
    |||| || ||| ||||||| |||||    
T  66877 tcctgcagctgtttaccaaatcaga 66853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 43 - 314
Target Start/End: Complemental strand, 23966 - 23695
Alignment:
Q  43 ccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccac 142  Q
    ||||||||||| ||||||||   ||||||||||||||||||||||||||| ||| | |||||  |   ||| |||||||||||||||||||| |||||||    
T  23966 ccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacatacattactcttgtggcctttctcaccac 23867  T
Q  143 acttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggctt 242  Q
    ||||| | |||||||| |||  ||||||||||||||||||||||||| | ||||||  ||   | ||||| || ||||||||||| ||||| || |||||    
T  23866 acttgtatcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggctt 23767  T
Q  243 ctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcata 314  Q
       |||||||||||||||||| || || | ||||||||| | ||| ||||||| ||| || || ||||||||    
T  23766 aggacgactctgttgtcccttacccctcctctcactcataatcttataatgagttttggtgtcttcttcata 23695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 171 - 356
Target Start/End: Complemental strand, 775 - 591
Alignment:
Q  171 atctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctcta 270  Q
    |||||||||||| |||||| |||||||||||| ||| |  ||||| ||||||||||| ||||| ||||| |||  ||||||||| |||||||| ||||||    
T  775 atctctcctcttaggcctcctctcatcattcagtctctatttacctttgtcagcaggagcactgtacggtttcggacgactctgctgtcccttacctcta 676  T
Q  271 cgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatctt 356  Q
    | ||||||||||||||| |  |||||||| ||||||||||||||||||||||| ||||| || |||| |||||| || ||||||||    
T  675 cactcactcatcaccttat-gtgagcttttgtatcctcttcataaatcctacagctgctcactaattaagaaaaattccttatctt 591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 4060 - 3999
Alignment:
Q  115 acattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctct 176  Q
    |||||||||||||  || ||||||||| |||||||||| ||||| |||||||||||||||||    
T  4060 acattactcttgtttcccttttcaccaaacttgaaacagacaatctcagtaggagcatctct 3999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 111 - 344
Target Start/End: Complemental strand, 16584 - 16351
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgc 210  Q
    |||| |||||||||||||||| || |||||||||||| | |||||||  |||| ||||| |||| || |  | |||||| ||||||||||||  || |||    
T  16584 acaagcattactcttgtggcccttctcaccacacttgtagcaaacaacctcagcaggagtatctttctttctaggcctcctctcatcattcaccctttgc 16485  T
Q  211 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 310  Q
    ||||| || |||||||| |||||||| |||||   ||||||||| || | ||| || || ||||||||||| ||||||||||||||||| ||||| || |    
T  16484 ttacctttatcagcaggagcactataaggctttggacgactctgctgactcttacccctccgctcactcataaccttgtaatgagctttggtatcttcct 16385  T
Q  311 cataaatcctacaactgcttaccaattcagaaaa 344  Q
    |||| ||||| ||||| || ||||||||||||||    
T  16384 catagatcctgcaacttctcaccaattcagaaaa 16351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1914 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold1914
Description:

Target: scaffold1914; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 70 - 320
Target Start/End: Complemental strand, 1246 - 996
Alignment:
Q  70 cccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggag 169  Q
    |||||||| ||||| ||||| || |||||||||||||| |||||||| ||||||||||| ||||| || |||||||| || || || || |||| || ||    
T  1246 cccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcatactatctcagcagaag 1147  T
Q  170 catctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctct 269  Q
    || |  || |  | |||||| |||||||||| | ||| |||||||| || ||||| |||||||||||||| ||   |||| |||| |||||||| |||||    
T  1146 cacccttcttactcggcctcctctcatcattaagtctctgcttacccttatcagccggggcactatacggtttaggacgattctgatgtcccttacctct 1047  T
Q  270 acgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcct 320  Q
     ||||||||| ||||||| ||||||||||| || ||||| ||||| |||||    
T  1046 tcgctcactcttcaccttataatgagctttggtgtcctcctcatagatcct 996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 73 - 335
Target Start/End: Complemental strand, 30339 - 30077
Alignment:
Q  73 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcat 172  Q
    |||| ||||||||| || |||||| ||| |||  ||  |||| |||| ||||||||||||||||||||||||||  |||||||||| |||| ||||||||    
T  30339 ttcttaccacacctaaaacatttcctcttatctctaccacaagcattgctcttgtggcctttttcaccacacttataacaaacaatctcagcaggagcat 30240  T
Q  173 ctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacg 272  Q
    || |||||||||||||| | ||||||||||   | || || || ||||||||||| ||||| || || ||   |||| |||||| |||||| || || |     
T  30239 ctttcctcttgggcctcctgtcatcattcatcttctgtttccctttgtcagcaggagcactgtaaggtttaggacgattctgttatcccttacccctcct 30140  T
Q  273 ctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaa 335  Q
    ||||||||| | || |||||||||||| || ||||| ||||| ||||| || |||||||||||    
T  30139 ctcactcattatctagtaatgagcttttgtgtcctcctcatatatcctgcagctgcttaccaa 30077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 136 - 344
Target Start/End: Original strand, 7911 - 8119
Alignment:
Q  136 tcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactat 235  Q
    |||||||||||| |||||||||| ||||||||| |||| || ||||| || ||| |||||||||||||||| ||||  || |||||| |||| ||||| |    
T  7911 tcaccacacttgtaacaaacaatctcagtaggaacatcccttctcttaggtctcctctcatcattcaatctctgctctcctttgtcaacaggagcactgt 8010  T
Q  236 acggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaa 335  Q
    | ||||||  |||||  || || ||||||   || ||||||||| | ||||| |||||||| ||||||||||| |||||||| |||||||| || |||||    
T  8011 agggcttcggacgaccttgctgacccttgttcctccgctcactcctaaccttataatgagccttcgtatcctcctcataaattctacaactactcaccaa 8110  T
Q  336 ttcagaaaa 344  Q
    |||||||||    
T  8111 ttcagaaaa 8119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 37 - 211
Target Start/End: Original strand, 1194 - 1368
Alignment:
Q  37 atatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggccttttt 136  Q
    ||||||||||||||||| ||||||| |   || |||||||  ||||| | |||||| |||||||| ||   | | |||||||||||||||||||| || |    
T  1194 atatcaccacgcttgcattcagctatcgtatgccccttctttccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtggcccttct 1293  T
Q  137 caccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgct 211  Q
    ||||||||||| |||||||||| ||||||||| |||| || ||||| || ||| |||||||||||||||| ||||    
T  1294 caccacacttgtaacaaacaatctcagtaggaacatcccttctcttaggtctcctctcatcattcaatctctgct 1368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 149 - 314
Target Start/End: Original strand, 2198 - 2363
Alignment:
Q  149 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacg 248  Q
    ||||||| || |||| ||||||||||||||| ||  ||||| ||||||||||||| || ||||| || ||||||| ||||||||| ||||| ||   |||    
T  2198 aacaaactatctcagcaggagcatctctcctattccgcctcctctcatcattcaacctttgctttcctttgtcagtaggggcactgtacggtttaggacg 2297  T
Q  249 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcata 314  Q
    |||||| |||||||| ||||| ||||||||||||||||| ||||||||||| || ||||| |||||    
T  2298 actctgctgtcccttacctcttcgctcactcatcaccttataatgagcttttgtgtcctcctcata 2363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 233
Target Start/End: Complemental strand, 5218 - 4998
Alignment:
Q  13 tcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtac 112  Q
    ||||| |||||||| ||||| || || || |||||||| || |||||||    ||| || ||||||||||||||||| |||||| ||||||   ||  ||    
T  5218 tcttcgttgcagttgtagcagacaatgtctccacgcttacattcagctagggtgtgtcctttctgaccacacctgaaacatttcctctcatttctaccac 5119  T
Q  113 aaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgctt 212  Q
    || ||||  | ||||||||||||||| ||| |||  |||||||||| |||| ||||||||||||||||||||||||| | ||||||||||  || |||||    
T  5118 aagcattgtttttgtggcctttttcatcactcttttaacaaacaatttcagcaggagcatctctcctcttgggcctcctatcatcattcatcctctgctt 5019  T
Q  213 accgttgtcagcaggggcact 233  Q
     || ||||||||||| |||||    
T  5018 ccctttgtcagcaggagcact 4998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 242
Target Start/End: Original strand, 36726 - 36958
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    |||||||| ||||| ||| |||| || ||||||| |||||||||||||||||||   ||||||||||  ||||||| ||| ||||||||| | ||||  |    
T  36726 ccctcttccttgcaattaaagcacacaatatcactacgcttgcaatcagctaacgtatgacccttcttgccacaccggaaacatttcttcacctcctctg 36825  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatg 209  Q
     ||||||||| |||||||||||||| |||||||| |||||||| || || || | |||||||||  || |||| |||| | | |||||   || ||| ||    
T  36826 gacaaacattgctcttgtggcctttctcaccacaattgaaacagacgatctccgcaggagcatccttcttcttaggccgcctatcatcgaccattctctg 36925  T
Q  210 cttaccgttgtcagcaggggcactatacggctt 242  Q
     || || || ||||||||||||||||| |||||    
T  36926 tttgcccttatcagcaggggcactatagggctt 36958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 366
Target Start/End: Complemental strand, 850 - 755
Alignment:
Q  271 cgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    ||||||||||||||||| ||||||||||| ||||| || |||||||||||||| || || ||||| |||||||||||||| |||||||||||||||    
T  850 cgctcactcatcaccttataatgagctttggtatcatcctcataaatcctacagctactcaccaactcagaaaagtttctaatcttctgataacca 755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 366
Target Start/End: Original strand, 25949 - 26044
Alignment:
Q  271 cgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    ||||||||||||||||| ||||||||||| ||||| || |||||||||||||| || || ||||| |||||||||||||| |||||||||||||||    
T  25949 cgctcactcatcaccttataatgagctttggtatcatcctcataaatcctacagctactcaccaactcagaaaagtttctaatcttctgataacca 26044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0605 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 206
Target Start/End: Original strand, 1535 - 1704
Alignment:
Q  37 atatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggccttttt 136  Q
    ||||| ||| ||||||| ||||| ||||| ||||| |||||||| || ||||| |||||||||||||| |  || ||| |||||||||||||||| ||      
T  1535 atatctccaagcttgcattcagccaacaaatgaccattctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggcccttaa 1634  T
Q  137 caccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatct 206  Q
    ||||||| ||| ||||||||| ||||  |||||||| ||||| ||| |||  | ||||||||||||||||    
T  1635 caccacatttgtaacaaacaacatcaacaggagcatttctccccttaggctgcctctcatcattcaatct 1704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0605; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 1771 - 1836
Alignment:
Q  273 ctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattc 338  Q
    ||| ||||||||||| |||||||| || |||||||| |||||||| ||||| || || ||||||||    
T  1771 ctcgctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaattc 1836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 217 - 365
Target Start/End: Original strand, 1 - 149
Alignment:
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 316  Q
    |||||| |||| |||||||| ||||||  |||||  || || ||||||   || |||||| || | ||||| || |||||| ||||||||||||||||||    
T  1 ttgtcaacaggagcactatagggcttcggacgaccttgctgacccttgttcctccgctcattcctaaccttatagtgagctctcgtatcctcttcataaa 100  T
Q  317 tcctacaactgcttaccaattcagaaaagtttcttatcttctgataacc 365  Q
    ||||||  |||||||||||||||||||| ||||| ||||||||||||||    
T  101 tcctactgctgcttaccaattcagaaaaatttctaatcttctgataacc 149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 43 - 158
Target Start/End: Original strand, 12058 - 12173
Alignment:
Q  43 ccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccac 142  Q
    ||||||||||| ||||||||   ||||||||||||||||||||||||||| ||| | |||||  |   |||||||||||||||||||||||| |||||||    
T  12058 ccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccac 12157  T
Q  143 acttgaaacaaacaat 158  Q
    ||||| | ||||||||    
T  12158 acttgtagcaaacaat 12173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 4 - 173
Target Start/End: Original strand, 101 - 270
Alignment:
Q  4 atgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcat 103  Q
    ||||| ||||||||||| |||||  |||| || ||||||  |||||||||||||||||  |  |||||||||| |||||||| ||  ||||||||    |    
T  101 atgtgaccctcttcattacagttgaagcacacaatatcattacgcttgcaatcagctacaatatgacccttcttaccacaccagacacatttcttgatct 200  T
Q  104 ccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatc 173  Q
    | | || ||||||||||||||||||||||||  | ||||| ||||||||||||||||| | |||||||||    
T  201 cttcaggacaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagcatc 270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 54; Significance: 6e-22; HSPs: 3)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 37 - 242
Target Start/End: Complemental strand, 3941 - 3736
Alignment:
Q  37 atatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggccttttt 136  Q
    ||||||||||||||||| ||||||| |   || |||||||  ||||| | |||||| |||||||| ||   | | || |||||||||||||||||  | |    
T  3941 atatcaccacgcttgcattcagctatcgcatgccccttctttccacatcggaagcacttcttctcctcaccattgcagacattactcttgtggcccctct 3842  T
Q  137 caccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactata 236  Q
    | ||||||||| | |||||||| |||  || | ||||||||||||| || ||| |||||||||||||||| || || || ||||||||||| ||||||||    
T  3841 cgccacacttgtagcaaacaatctcaacagaaacatctctcctcttaggtctcctctcatcattcaatctttgtttccccttgtcagcaggagcactata 3742  T
Q  237 cggctt 242  Q
     |||||    
T  3741 gggctt 3736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 161
Target Start/End: Complemental strand, 7861 - 7704
Alignment:
Q  4 atgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcat 103  Q
    ||||| ||||||||||| |||||  |||| || ||||||  ||  |||||||||||||  |  ||||||||||  ||||||| ||  ||||||||    |    
T  7861 atgtgaccctcttcattacagttgaagcacacaatatcattacttttgcaatcagctataatatgacccttcttgccacaccggacacatttcttgatct 7762  T
Q  104 ccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatc 161  Q
    | | || ||||||||||||||||||||||||  | ||||| |||||||||||||||||    
T  7761 cttcaggacaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatc 7704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 323
Target Start/End: Complemental strand, 7582 - 7542
Alignment:
Q  283 accttgtaatgagctttcgtatcctcttcataaatcctaca 323  Q
    ||||||||||||||| | |||||||||||||| ||||||||    
T  7582 accttgtaatgagctctggtatcctcttcatagatcctaca 7542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 4 - 173
Target Start/End: Complemental strand, 13206 - 13037
Alignment:
Q  4 atgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcat 103  Q
    ||||| ||||||||||| |||||  |||| || ||||||  |||||||||||||||||  |  |||||||||| |||||||| ||  ||||||||    |    
T  13206 atgtgaccctcttcattacagttgaagcacacaatatcattacgcttgcaatcagctacaatatgacccttcttaccacaccagacacatttcttgatct 13107  T
Q  104 ccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatc 173  Q
    | | || ||||||||||||||||||||||||  | ||||| ||||||||||||||||| | |||||||||    
T  13106 cttcaggacaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagcatc 13037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 111 - 366
Target Start/End: Original strand, 7202 - 7457
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgc 210  Q
    |||| |||||||||| |||||||| ||||||||  |  | |||||||| |||  |||||||||| || |  | |||||| |||||||||||| ||| |||    
T  7202 acaagcattactcttatggcctttctcaccacaagtatagcaaacaatctcaacaggagcatctttctttctaggcctcctctcatcattcattctttgc 7301  T
Q  211 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 310  Q
    ||||| || |||||||| ||||| || |||||    ||||| || || | ||||||| | |||||| |||  |||||||||||||| || ||||| || |    
T  7302 ttacccttatcagcaggagcactgtaaggctttggtcgactttgctgactcttgcctttccgctcattcacaaccttgtaatgagccttagtatcttcct 7401  T
Q  311 cataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    |||| ||||| |||||||| ||||  |||||||| || |  |||||||| ||||||    
T  7402 catatatcctgcaactgctcaccagctcagaaaaattacggatcttctggtaacca 7457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 111 - 366
Target Start/End: Original strand, 14332 - 14587
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgc 210  Q
    |||| |||||||||| |||||||| ||||||||  |  | |||||||| |||  |||||||||| || |  | |||||| |||||||||||| ||| |||    
T  14332 acaagcattactcttatggcctttctcaccacaagtatagcaaacaatctcaacaggagcatctttctttctaggcctcctctcatcattcattctttgc 14431  T
Q  211 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 310  Q
    ||||| || |||||||| ||||| || |||||    ||||| || || | ||||||| | |||||| |||  |||||||||||||| || ||||| || |    
T  14432 ttacccttatcagcaggagcactgtaaggctttggtcgactttgctgactcttgcctttccgctcattcacaaccttgtaatgagccttagtatcttcct 14531  T
Q  311 cataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    |||| ||||| |||||||| ||||  |||||||| || |  |||||||| ||||||    
T  14532 catatatcctgcaactgctcaccagctcagaaaaattacggatcttctggtaacca 14587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 111 - 366
Target Start/End: Complemental strand, 57589 - 57334
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgc 210  Q
    |||| |||||||||| |||||||| || |||||  |  |  ||||||| |||  |||||||||| || |  | |||||| |||||||||||| ||| |||    
T  57589 acaagcattactcttatggcctttctcgccacaagtatagtaaacaatctcaacaggagcatctttctttctaggcctcctctcatcattcattctttgc 57490  T
Q  211 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 310  Q
    ||||| || |||||||| ||||| || |||||   |||||| || || || |||||| | |||||| |||  |||||||||||||| || ||||| || |    
T  57489 ttacccttatcagcaggagcactgtaaggctttggacgactttgctgacctttgcctttccgctcattcacaaccttgtaatgagccttagtatcttcct 57390  T
Q  311 cataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    |||| || ||||||||||| ||||  ||||||||||| |  |||||||| ||||||    
T  57389 catatattctacaactgctcaccagctcagaaaagttacggatcttctggtaacca 57334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1881 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold1881
Description:

Target: scaffold1881; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 46 - 326
Target Start/End: Complemental strand, 520 - 240
Alignment:
Q  46 cgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacact 145  Q
    |||||||||||| |||  |  ||||||||||  ||||||| ||  ||||||||    |||| || ||||||||| |||||||||||||| || ||||| |    
T  520 cgcttgcaatcatctacaatatgacccttcttgccacaccggacacatttcttgatctcctcaggacaaacattgctcttgtggcctttctcgccacaat 421  T
Q  146 tgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttcta 245  Q
    ||||||||||||| || |||||||||||  || |||| |||| | | |||||   || ||| || || || || |||||||||||| |||| |||||       
T  420 tgaaacaaacaatctccgtaggagcatccttcttcttaggccgcctatcatcgaccattctttgtttgcccttatcagcaggggcaatataaggcttagg 321  T
Q  246 acgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaact 326  Q
     |||||||| || ||||||    | |||||| |||  |||||||||||||| || |||||||||||||| || ||||||||    
T  320 gcgactctgctggcccttggtcttccgctcattcacaaccttgtaatgagccttggtatcctcttcatagattctacaact 240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 152
Target Start/End: Complemental strand, 28977 - 28862
Alignment:
Q  37 atatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggccttttt 136  Q
    ||||||||| ||||||| ||||||||   |||||||||||  ||||||| ||| ||||||||  | ||||||| ||||||||| |||||||||||||| |    
T  28977 atatcaccatgcttgcattcagctaatgtgtgacccttcttgccacaccggaaacatttctttacctccttaggacaaacattgctcttgtggcctttct 28878  T
Q  137 caccacacttgaaaca 152  Q
    | ||||| ||||||||    
T  28877 cgccacaattgaaaca 28862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 271 - 366
Target Start/End: Complemental strand, 30843 - 30748
Alignment:
Q  271 cgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    ||||||| ||| ||||||||||||||||| ||||||||||| || || ||||||||||| |||||||||||||| |  || ||| |||||||||||    
T  30843 cgctcacacataaccttgtaatgagctttggtatcctcttcgtagattctacaactgctcaccaattcagaaaattgcctaatcctctgataacca 30748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 204
Target Start/End: Complemental strand, 30983 - 30895
Alignment:
Q  116 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaat 204  Q
    |||||||||||||||| || |||||||||||| | |||||||| |||| |||| ||||||| ||||| |  ||| ||||||||||||||    
T  30983 cattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggaacatctcttctcttagttctcctctcatcattcaat 30895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 4 - 173
Target Start/End: Complemental strand, 10240 - 10071
Alignment:
Q  4 atgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcat 103  Q
    ||||| |||||||| ||||| ||  |||| || ||||||| | |||| |||||||||||    ||||||||||  ||||||| ||| ||||||||  | |    
T  10240 atgtgaccctcttccttgcaattgaagcacacaatatcactatgcttacaatcagctaatgtatgacccttcttgccacaccggaaacatttctttacct 10141  T
Q  104 cct-tagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatc 173  Q
    ||| ||| ||||||||| |||||||||||||| |||||||| |||||||| ||||| || |||||||||||    
T  10140 cctctag-acaaacattgctcttgtggcctttctcaccacaattgaaacagacaatctccgtaggagcatc 10071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 108 - 362
Target Start/End: Complemental strand, 1400 - 1146
Alignment:
Q  108 agtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatcta 207  Q
    ||||||| ||||||||||||| ||||| || || ||   | |||||||||  |||||||||   ||| |||||||||| | | ||||||||||||  ||     
T  1400 agtacaaccattactcttgtgacctttctctcctcatcggtaacaaacaacttcagtaggattctctttcctcttgggtcccctctcatcattcaccctc 1301  T
Q  208 tgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcct 307  Q
    |||| ||| || |||||||| | ||| || |||||   |||| ||||||| | ||| ||| | | ||||||||   |||||| |||||||||||||||||    
T  1300 tgctcacccttatcagcaggagtactgtaaggctttggacgattctgttgactcttacctttcctctcactcacagccttgtgatgagctttcgtatcct 1201  T
Q  308 cttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    | ||||| || || |||||||| |||| || ||||||||| |  |||||||||||    
T  1200 cctcatagattctgcaactgctcaccagtttagaaaagttaccgatcttctgata 1146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 111 - 242
Target Start/End: Original strand, 17489 - 17620
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgc 210  Q
    |||||||||||||||||||||||| |||||||| |||||||| ||||| || | |||||||||  || |||| |||| | | |||||   || ||||||     
T  17489 acaaacattactcttgtggcctttctcaccacaattgaaacagacaatctccgcaggagcatccttcttcttaggccgcctatcatcgaccattctatgt 17588  T
Q  211 ttaccgttgtcagcaggggcactatacggctt 242  Q
    || || || ||||||||||||||||| |||||    
T  17589 ttgcccttatcagcaggggcactatagggctt 17620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 3859 - 3953
Alignment:
Q  220 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcata 314  Q
    ||||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| |||||||||||||||||    
T  3859 tcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctcttcata 3953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 117 - 344
Target Start/End: Original strand, 104561 - 104788
Alignment:
Q  117 attactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccg 216  Q
    |||||||||||||||||| ||||||||  |  | |||||||| |||  |||||||||| || |  | |||| | |||||||| ||| ||| || || ||     
T  104561 attactcttgtggcctttctcaccacaagtatagcaaacaatctcaacaggagcatctttctttctaggccgcctctcatcaatcattctctgttttccc 104660  T
Q  217 ttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaa 316  Q
    || |||||||| |||||||| |||||   ||||||||| || || ||| || | |||||| |||  | |||||||||||  || |||||||| |||||||    
T  104661 ttatcagcaggagcactataaggctttggacgactctgctgacctttgacttttcgctcattcacaatcttgtaatgagtcttagtatcctcctcataaa 104760  T
Q  317 tcctacaactgcttaccaattcagaaaa 344  Q
    |||| |||||||| ||||  ||||||||    
T  104761 tcctgcaactgctcaccagctcagaaaa 104788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 362
Target Start/End: Original strand, 30336 - 30490
Alignment:
Q  208 tgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcct 307  Q
    ||||| || ||||||||||| ||||| || |||||   ||||||||| ||||||||||| || | |||||||||   ||||||||||||||| || || |    
T  30336 tgctttcctttgtcagcaggagcactgtaaggcttaggacgactctgctgtcccttgcccctcctctcactcattgtcttgtaatgagctttggtgtctt 30435  T
Q  308 cttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    |||||||||| || |||||| | ||||| ||||| |||  ||| |||| ||||||    
T  30436 cttcataaattctgcaactgttaaccaactcagagaagactctgatctgctgata 30490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 158
Target Start/End: Original strand, 30225 - 30310
Alignment:
Q  73 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaat 158  Q
    ||||||||||||||||| || ||| |||||||  ||  |||||| || || ||||||||||| |||||||||||| ||||||||||    
T  30225 ttctgaccacacctgaatcacttcctctcatctctaccacaaacgttgcttttgtggcctttctcaccacacttgtaacaaacaat 30310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 242
Target Start/End: Complemental strand, 9329 - 9195
Alignment:
Q  108 agtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatcta 207  Q
    ||||||| |||||||||||||||| || ||||||||  |  | |||||||| ||||||| || |||| || |  | |||||| ||||||||||||||||     
T  9329 agtacaagcattactcttgtggcccttctcaccacaagtatagcaaacaatctcagtagtagtatctttctttctaggcctcctctcatcattcaatctt 9230  T
Q  208 tgcttaccgttgtcagcaggggcactatacggctt 242  Q
    || ||||| || |||||||| |||||||| |||||    
T  9229 tgtttacccttatcagcaggagcactataaggctt 9195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 362
Target Start/End: Complemental strand, 9153 - 9075
Alignment:
Q  284 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    |||||||||||||||| ||||| || ||||| || || |||||||| |||| |||||||||||  |  |||||||||||    
T  9153 ccttgtaatgagctttagtatcttcctcatagattctgcaactgctcaccagttcagaaaagtaacggatcttctgata 9075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 110 - 199
Target Start/End: Original strand, 36156 - 36245
Alignment:
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcat 199  Q
    |||| |||||||||||||||||||| ||||||||| || | |||||||| | |||||| |||||||| ||||| || ||| |||||||||    
T  36156 tacagacattactcttgtggcctttctcaccacacctgtagcaaacaatcttagtaggggcatctcttctcttaggtctcctctcatcat 36245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 101 - 366
Target Start/End: Complemental strand, 216405 - 216140
Alignment:
Q  101 catccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcatt 200  Q
    ||||| ||| |||| |||||||||| |||||||| ||||||||  || | |||||||| |||| |  | ||||| || |  | |||||| | | ||||||    
T  216405 catccctaggacaagcattactcttatggcctttctcaccacaagtgtagcaaacaatctcagcaacatcatctttctttctaggcctccttttatcatt 216306  T
Q  201 caatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttc 300  Q
    |||||| |||||||| || |||||||| ||||| || |||||   |||||| || || ||||||||| | | |||| |||  |||||||||||||| ||     
T  216305 caatctttgcttacccttatcagcaggagcactgtaaggctttggacgactttgctgacccttgcctttcctctcattcacaaccttgtaatgagcctta 216206  T
Q  301 gtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    |||||||  ||||| ||  | |||||||| | ||  ||||||||||| |  |||||||| ||||||    
T  216205 gtatccttctcatatattatgcaactgctcagcagctcagaaaagttacggatcttctggtaacca 216140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 347
Target Start/End: Complemental strand, 13449 - 13213
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgc 210  Q
    |||| |||||||||| |||||||| ||||||||  || | |||||||| ||||||  | ||||| || |  | |||||| |||||||||||||||| |||    
T  13449 acaagcattactcttatggcctttctcaccacaagtgtagcaaacaatctcagtaacaacatctttctttctaggcctcctctcatcattcaatctttgc 13350  T
Q  211 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 310  Q
    ||||| || |||||||| |||||  | | |||   || ||| || || ||||||||| | | |||| |||  |||| |||| |||| || ||||| || |    
T  13349 ttacccttatcagcaggagcactgcaagactttggacaactttgctgacccttgcctttcctctcattcacaacctcgtaacgagccttagtatcttcct 13250  T
Q  311 cataaatcctacaactgcttaccaattcagaaaagtt 347  Q
    |||| || ||||||||||| ||||  |||||||||||    
T  13249 catatattctacaactgctcaccagctcagaaaagtt 13213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 362
Target Start/End: Complemental strand, 9922 - 9846
Alignment:
Q  286 ttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    |||||||| ||||| |||||||||||||| || || |||||||| || ||||||| |||||| |  |||||||||||    
T  9922 ttgtaatgtgctttggtatcctcttcatagattctgcaactgctcactaattcagtaaagttacggatcttctgata 9846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1274 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1274
Description:

Target: scaffold1274; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 347
Target Start/End: Original strand, 20 - 182
Alignment:
Q  184 ggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatca 283  Q
    |||||| |||||||||||||||| |||||||| || |||||||| ||||| || |||||   |||||| || ||  |||||||| | | |||| |||  |    
T  20 ggcctcctctcatcattcaatctttgcttacccttatcagcaggagcactgtaaggctttggacgactttgctg-accttgcctttcctctcattcacaa 118  T
Q  284 ccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtt 347  Q
    |||||||||||||||| ||||| || ||||| ||  | |||||||| ||||  |||||||||||    
T  119 ccttgtaatgagctttggtatcttcctcatagattttgcaactgctcaccagctcagaaaagtt 182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 158
Target Start/End: Original strand, 1 - 112
Alignment:
Q  47 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacactt 146  Q
    ||||||||||||||||    ||||||||||  ||||||| ||| ||||||||| | ||||| | ||||||||| || ||||||||||| ||||||||  |    
T  1 gcttgcaatcagctaaagtatgacccttcttgccacaccggaaacatttcttcacctcctttggacaaacattgcttttgtggcctttctcaccacaaat 100  T
Q  147 gaaacaaacaat 158  Q
    |||||| |||||    
T  101 gaaacagacaat 112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 259
Target Start/End: Original strand, 12322 - 12421
Alignment:
Q  160 tcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtc 259  Q
    ||||||||||||||||||||||  |||||| ||||||||||||  || || ||| | ||||||||||| ||||||||||  |||  ||||||||| ||||    
T  12322 tcagtaggagcatctctcctctaaggcctcctctcatcattcagcctctgtttatctttgtcagcaggagcactatacgatttcggacgactctgctgtc 12421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 366
Target Start/End: Original strand, 18174 - 18429
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgc 210  Q
    |||| |||||||||| |||||||| ||||||||  || | |||||||| |||| || ||||||| || |  | |||||| |||||||||| | ||| |||    
T  18174 acaagcattactcttatggcctttctcaccacaagtgtagcaaacaatctcagcagtagcatctttctttcttggcctcctctcatcattaactctttgc 18273  T
Q  211 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 310  Q
    ||||| || |||||||| ||| | || |||||   |||||| |  || || || ||| | | |||| |||   |||||||||||||||| ||||| ||||    
T  18274 ttacccttatcagcaggagcattgtaaggctttggacgacttttctgacctttacctttcctctcattcacagccttgtaatgagctttggtatcttctt 18373  T
Q  311 cataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    ||||||| || ||||| || ||||  ||| ||||||| |  |||||||| ||||||    
T  18374 cataaattctgcaactactcaccagctcaaaaaagttacggatcttctggtaacca 18429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 220 - 366
Target Start/End: Original strand, 11466 - 11612
Alignment:
Q  220 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 319  Q
    ||||||||||||||||| |||||   |||||| || || ||||||||| | | |||| |||  |||||||||||||| || ||||| || ||||| || |    
T  11466 tcagcaggggcactataaggcttgggacgactttgctgacccttgcctttcctctcattcacaaccttgtaatgagccttagtatcttcctcatatattc 11565  T
Q  320 tacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    | |||||||| ||||  ||||||||||| |  |||||||| ||||||    
T  11566 tgcaactgctcaccagctcagaaaagttacggatcttctggtaacca 11612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 173
Target Start/End: Complemental strand, 10278 - 10152
Alignment:
Q  47 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacactt 146  Q
    |||||||||||||||  |  |||||||||| |||||||| ||  ||||||||    || | || ||||||||||||||||||||||||  | ||| | ||    
T  10278 gcttgcaatcagctacaatatgacccttcttaccacaccggacacatttcttgatctcttcaggacaaacattactcttgtggcctttcccgccatagtt 10179  T
Q  147 gaaacaaacaatatcagtaggagcatc 173  Q
    ||||||||||||||| | |||||||||    
T  10178 gaaacaaacaatatccgcaggagcatc 10152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 173
Target Start/End: Complemental strand, 12933 - 12807
Alignment:
Q  47 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacactt 146  Q
    |||||||||||||||  |  |||||||||| |||||||| ||  ||||||||    || | || ||||||||||||||||||||||||  | ||| | ||    
T  12933 gcttgcaatcagctacaatatgacccttcttaccacaccggacacatttcttgatctcttcaggacaaacattactcttgtggcctttcccgccatagtt 12834  T
Q  147 gaaacaaacaatatcagtaggagcatc 173  Q
    ||||||||||||||| | |||||||||    
T  12833 gaaacaaacaatatccgcaggagcatc 12807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1423 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold1423
Description:

Target: scaffold1423; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 173
Target Start/End: Complemental strand, 452 - 291
Alignment:
Q  12 ctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagta 111  Q
    |||||||||||||||| | |||||||||||| || | ||||| |||||||     ||||||||||  ||||| | ||| ||| ||||  |||||  || |    
T  452 ctcttcattgcagttaaaacatactatatcatcatgtttgcactcagctagtgcatgacccttctttccacagcggaaacatctcttggcatcccaagga 353  T
Q  112 caaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatc 173  Q
    ||| ||||||||||||||||||| ||||||||  | ||||| ||||| || | |||||||||    
T  352 caagcattactcttgtggcctttctcaccacaagtaaaacagacaatctctgcaggagcatc 291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1423; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 334
Target Start/End: Complemental strand, 179 - 130
Alignment:
Q  285 cttgtaatgagctttcgtatcctcttcataaatcctacaactgcttacca 334  Q
    |||||||||||| || |||||||| ||||||||||| |||||||| ||||    
T  179 cttgtaatgagccttagtatcctcatcataaatcctgcaactgctcacca 130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 2252 - 2313
Alignment:
Q  283 accttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaa 344  Q
    |||||||||||||||||||||||||| ||||| || || ||||| || ||||||||||||||    
T  2252 accttgtaatgagctttcgtatcctcctcatagattctgcaactactcaccaattcagaaaa 2313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 8633 - 8798
Alignment:
Q  4 atgtggccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcat 103  Q
    ||||| |||||||||||||||||| ||||||| |||||| || | ||||| |||||||     ||||||||||  ||||| |  || ||| ||||   ||    
T  8633 atgtgaccctcttcattgcagttaaagcatacaatatcatcatgtttgcactcagctagagcatgacccttctttccacagcgaaaacatctcttggtat 8732  T
Q  104 ccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggag 169  Q
    || ||| |||| |||||||||||||||| || ||||||||    ||||||||||| ||||||||||    
T  8733 ccctaggacaagcattactcttgtggcccttctcaccacaagaaaaacaaacaatctcagtaggag 8798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 242
Target Start/End: Original strand, 99 - 248
Alignment:
Q  93 tttcttctcatccttagtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttc 192  Q
    ||||||| | |||| || ||||||||| |||||||||||||| |||||||| |||||||| ||||| || | |||||||||  || |||| |||| | |     
T  99 tttcttcacctcctcaggacaaacattgctcttgtggcctttctcaccacaattgaaacagacaatctctgcaggagcatccttcttcttaggccgccta 198  T
Q  193 tcatcattcaatctatgcttaccgttgtcagcaggggcactatacggctt 242  Q
    |||||   || ||| || || || || ||||||||||||||||| |||||    
T  199 tcatcgaccattctctgttttcccttatcagcaggggcactatagggctt 248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 362
Target Start/End: Original strand, 17703 - 17819
Alignment:
Q  246 acgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaag 345  Q
    ||||||||| |||||||| || || | ||||||||| | ||| ||||||||||| || || ||||||||||| || |||||| ||||||| ||||| |||    
T  17703 acgactctgctgtcccttacccctcctctcactcattatcttataatgagctttggtgtcttcttcataaattctgcaactgtttaccaactcagagaag 17802  T
Q  346 tttcttatcttctgata 362  Q
      ||| |||| ||||||    
T  17803 actctgatctgctgata 17819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2059 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold2059
Description:

Target: scaffold2059; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 242
Target Start/End: Complemental strand, 744 - 613
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgc 210  Q
    ||||||||||||||||||| |||| |||||||| |||||||||  ||| ||||  |||||||| ||| |||| |||| | | |||||   || ||| ||     
T  744 acaaacattactcttgtggtctttctcaccacaattgaaacaagtaatctcagctggagcatccctcttcttaggccgcctatcatcgaccattctctgt 645  T
Q  211 ttaccgttgtcagcaggggcactatacggctt 242  Q
    || || || ||||||||||||||||| |||||    
T  644 ttgcccttatcagcaggggcactataaggctt 613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 362
Target Start/End: Original strand, 5589 - 5668
Alignment:
Q  283 accttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    ||||||||||||||||||||||| || ||||| || || |||||||| |||| |||||||||||  |  |||||||||||    
T  5589 accttgtaatgagctttcgtatcttcctcatagattctgcaactgctcaccagttcagaaaagtcacggatcttctgata 5668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 14108 - 13945
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    |||||||||||||| ||  |||| || ||||||  |||||||||||||||||  |   |||||||||  ||||||||||  ||||||||    || |  |    
T  14108 ccctcttcattgcaattgaagcacacaatatcattacgcttgcaatcagctactatacgacccttcttgccacacctgacacatttctttatctcttctg 14009  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatc 173  Q
     ||||||||| |||||||||||||| |||||||| || ||||| ||||| || | |||||||||    
T  14008 gacaaacattgctcttgtggcctttctcaccacaattaaaacagacaatctccgcaggagcatc 13945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 11432 - 11269
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    |||||||||||||| ||  | || || ||||||  |||||||||||||||||  |  ||||||||||  ||||||| ||  ||||||||    || |  |    
T  11432 ccctcttcattgcaattgaatcacacaatatcattacgcttgcaatcagctactatatgacccttcttgccacaccggacacatttctttatctcttctg 11333  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatc 173  Q
     ||||||||| |||||||||||||| |||||||| || ||||| ||||| || |||||||||||    
T  11332 gacaaacattgctcttgtggcctttctcaccacaattaaaacagacaatctccgtaggagcatc 11269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 15117 - 14954
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    |||||||||||||| ||  | || || ||||||  |||||||||||||||||  |  ||||||||||  ||||||| ||  ||||||||    || |  |    
T  15117 ccctcttcattgcaattgaatcacacaatatcattacgcttgcaatcagctactatatgacccttcttgccacaccggacacatttctttatctcttctg 15018  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatc 173  Q
     ||||||||| |||||||||||||| |||||||| || ||||| ||||| || |||||||||||    
T  15017 gacaaacattgctcttgtggcctttctcaccacaattaaaacagacaatctccgtaggagcatc 14954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 345
Target Start/End: Original strand, 48059 - 48293
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgc 210  Q
    |||| ||||||||||||||||||| ||||||||  |  | || ||||| |||  |||||||||| || |  | || | | ||||||||  || ||| ||     
T  48059 acaagcattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatctttctttctagggcgcctctcatcaaccattctctgt 48158  T
Q  211 ttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctctt 310  Q
    ||||| || |||||||| ||||| || |||||   ||||||||| || || ||| || | |||||| |||  | |||||||||||  || |||||||| |    
T  48159 ttacccttatcagcaggagcactgtaaggcttaggacgactctgctgacctttggcttttcgctcattcacaatcttgtaatgagtcttggtatcctcct 48258  T
Q  311 cataaatcctacaactgcttaccaattcagaaaag 345  Q
    ||||||| || |||||||| ||||| |||||||||    
T  48259 cataaattctgcaactgctcaccaactcagaaaag 48293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 345
Target Start/End: Complemental strand, 55441 - 55212
Alignment:
Q  116 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttacc 215  Q
    ||||||||||||||||||| ||||||||  |  | || ||||| |||  |||||||||| || |  | || | | ||||||||  || ||| || |||||    
T  55441 cattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatctttctttctagggcgcctctcatcaaccattctctgtttacc 55342  T
Q  216 gttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataa 315  Q
     || |||||||| ||||| || | |||   ||||||||| || || ||| || | |||||| |||  | |||||||||||  || |||||||| ||||||    
T  55341 cttatcagcaggagcactgtaagtcttaggacgactctgctgacctttgtcttttcgctcattcacaatcttgtaatgagtcttggtatcctcctcataa 55242  T
Q  316 atcctacaactgcttaccaattcagaaaag 345  Q
    || || |||||||| ||||| |||||||||    
T  55241 attctgcaactgctcaccaactcagaaaag 55212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 12958 - 13079
Alignment:
Q  13 tcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtac 112  Q
    |||||||| ||||| ||||| || | ||| |||||||| |||||||||||   ||| || |||||||||||||| ||||| |||||||| ||      ||    
T  12958 tcttcattacagttgtagcaaacaacatccccacgcttacaatcagctaaagtgtgtcctttctgaccacacctaaagcacttcttctcgtcacggtcac 13057  T
Q  113 aaacattactcttgtggccttt 134  Q
    | ||||||||||||||||||||    
T  13058 atacattactcttgtggccttt 13079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 150
Target Start/End: Original strand, 3131 - 3232
Alignment:
Q  49 ttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacacttga 148  Q
    ||||||||||||||   |||||||||||  ||||||| ||| || |||| | | |||| || |||| || |||||||||||||||| |||||||| ||||    
T  3131 ttgcaatcagctaatgtgtgacccttcttgccacaccggaaacacttctccacctcctcaggacaagcagtactcttgtggcctttctcaccacaattga 3230  T
Q  149 aa 150  Q
    ||    
T  3231 aa 3232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 12162 - 12214
Alignment:
Q  116 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtagga 168  Q
    |||||||||||||||| || |||||||||||| | |||||||| |||||||||    
T  12162 cattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtagga 12214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 314
Target Start/End: Original strand, 5262 - 5530
Alignment:
Q  46 cgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacact 145  Q
    ||||||||||||||||  |  ||||||||||  ||||||| ||  ||||||||    || | || ||||||||||||||| ||||| || || ||||| |    
T  5262 cgcttgcaatcagctacaatatgacccttcttgccacaccagacacatttcttgatctcttcaggacaaacattactcttatggcccttctcgccacagt 5361  T
Q  146 tgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgcttaccgttgtcagcaggggcactatacggcttcta 245  Q
    ||||||||||||| || | |||||||||  || |||| |||| | | |||||   || ||| || || || || |||||| |||||||||| |||||       
T  5362 tgaaacaaacaatctccgcaggagcatccttcttcttaggccgcctatcatcgaccattctctgtttgcccttatcagcaagggcactataaggcttagg 5461  T
Q  246 acgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcata 314  Q
     |||||||| || ||||||    | |||||| |||  |||||||||||||| || |||||||| |||||    
T  5462 gcgactctgctggcccttggtcttccgctcattcacaaccttgtaatgagccttagtatcctcatcata 5530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 4574 - 4498
Alignment:
Q  67 tgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccaca 143  Q
    |||||||||| |||||| |  || ||| ||||| |||||  || |||| ||||||||||||||||||||||||||||    
T  4574 tgacccttcttaccacaacgaaaacatctcttcacatccccaggacaagcattactcttgtggcctttttcaccaca 4498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 344
Target Start/End: Original strand, 26678 - 26914
Alignment:
Q  108 agtacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatcta 207  Q
    ||||||| ||||||||||||||||||| ||||||||  |  | |||||||  |||| || || |||| || |  | |||||| |||||||||||| |||     
T  26678 agtacaagcattactcttgtggcctttctcaccacaagtatagcaaacaacctcagcagtagtatctttctttctaggcctcctctcatcattcactctt 26777  T
Q  208 tgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcct 307  Q
    |||||||| ||  ||||||| ||||| || |||||   |||| | |  || | ||| ||| | | ||||  ||  ||||||||||||||||||||||  |    
T  26778 tgcttacccttaccagcaggagcactgtaaggctttggacgaatttactgactcttaccttttctctcatgcacaaccttgtaatgagctttcgtatatt 26877  T
Q  308 cttcataaatcctacaactgcttaccaattcagaaaa 344  Q
    | ||||| || || |||||||| |||| |||||||||    
T  26878 cctcatagattctgcaactgctcaccagttcagaaaa 26914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 113 - 172
Target Start/End: Original strand, 445 - 504
Alignment:
Q  113 aaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcat 172  Q
    ||||||| |||||||||||||| |||||||| || ||||| ||||| |||| ||||||||    
T  445 aaacattgctcttgtggcctttctcaccacaattaaaacagacaatctcagcaggagcat 504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 153
Target Start/End: Original strand, 369 - 512
Alignment:
Q  10 ccctcttcattgcagttatagcatactatatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttag 109  Q
    ||||| || ||||| ||| |||| || || ||| || ||||||||||| ||||   |||||||||||  ||||||| ||| || | |||| | |||| |     
T  369 ccctcctctttgcaattaaagcacacgatgtcagcatgcttgcaatcaactaatgtgtgacccttcttgccacaccggaaacactccttcacctcctcac 468  T
Q  110 tacaaacattactcttgtggcctttttcaccacacttgaaacaa 153  Q
     |||| || |||||||||||||||| |||||||| |||||||||    
T  469 gacaagcagtactcttgtggcctttctcaccacaattgaaacaa 512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 366
Target Start/End: Original strand, 15911 - 15994
Alignment:
Q  283 accttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    |||||||||||||| || |||||||| ||||| || || |||||||| ||||| |||||||| || |  |||||||| ||||||    
T  15911 accttgtaatgagccttagtatcctcctcatagattctgcaactgctcaccaactcagaaaaattacggatcttctggtaacca 15994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 149
Target Start/End: Original strand, 114 - 217
Alignment:
Q  46 cgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacact 145  Q
    ||||||||||||||||  |  |||||||||| |||||||| ||  ||||||||    ||   || |||||||||||||||||||||||| |||||||| |    
T  114 cgcttgcaatcagctacaacatgacccttcttaccacaccggacacatttcttgatctctacaggacaaacattactcttgtggcctttctcaccacaat 213  T
Q  146 tgaa 149  Q
    ||||    
T  214 tgaa 217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 111 - 242
Target Start/End: Complemental strand, 139585 - 139454
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgc 210  Q
    |||||||||||||||||||||||| |||||||| ||||| |||  ||| ||||  |||| ||| ||| |||| |||| | | |||||   || ||| ||     
T  139585 acaaacattactcttgtggcctttctcaccacaattgaagcaagtaatctcagctggagtatccctcttcttaggccgcctatcatcgaccattctctgt 139486  T
Q  211 ttaccgttgtcagcaggggcactatacggctt 242  Q
    || || || ||||||||||||||||| |||||    
T  139485 ttgcccttatcagcaggggcactataaggctt 139454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 362
Target Start/End: Complemental strand, 13932 - 13778
Alignment:
Q  208 tgcttaccgttgtcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcct 307  Q
    ||||| || ||||||||||| ||||| || |||||   |||| |||| |||||||| || || | ||||||||| | ||| ||||||||||| || || |    
T  13932 tgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgctgtcccttacccctcctctcactcattatcttttaatgagctttggtgtctt 13833  T
Q  308 cttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 362  Q
    ||||||| || ||||| ||| | ||||| ||||| |||  ||| |||| ||||||    
T  13832 cttcatagattctacacctgttaaccaactcagagaagactctgatctgctgata 13778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 334
Target Start/End: Original strand, 15349 - 15463
Alignment:
Q  220 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 319  Q
    ||||||||||||||||| |||||    ||||||||||| |||||  || | |||||| |||  | |||||||||||  || |||||||| ||||| ||||    
T  15349 tcagcaggggcactataaggcttagggcgactctgttgacccttagctttccgctcattcacaatcttgtaatgagtcttggtatcctcctcatagatcc 15448  T
Q  320 tacaactgcttacca 334  Q
    | |||||||| ||||    
T  15449 tgcaactgctcacca 15463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 366
Target Start/End: Original strand, 2427 - 2573
Alignment:
Q  220 tcagcaggggcactatacggcttctaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcc 319  Q
    |||||| ||||||| || |||||   |||||||||||| |||||| |  | |||||| |||  | |||||||||||  || |||||||| || |||||||    
T  2427 tcagcaagggcactgtaaggcttaggacgactctgttgacccttggcctttcgctcattcacaatcttgtaatgagtcttggtatcctcctcgtaaatcc 2526  T
Q  320 tacaactgcttaccaattcagaaaagtttcttatcttctgataacca 366  Q
    | |||||||| ||||  |||||||||  ||  |||||||| ||||||    
T  2527 tgcaactgctcaccagctcagaaaagactcggatcttctggtaacca 2573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 369 - 431
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatc 173  Q
    |||| |||| |||||||||||||| |||||||| || ||||||||||| |||| |||| ||||    
T  369 acaagcattgctcttgtggcctttctcaccacaattaaaacaaacaatctcagcaggaacatc 431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 341
Target Start/End: Original strand, 541 - 599
Alignment:
Q  283 accttgtaatgagctttcgtatcctcttcataaatcctacaactgcttaccaattcaga 341  Q
    |||||||||||||| || || ||||| ||||||||||| |||||||| ||||| |||||    
T  541 accttgtaatgagccttagtgtcctcctcataaatcctgcaactgctcaccaactcaga 599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 153
Target Start/End: Original strand, 171447 - 171489
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccacacttgaaacaa 153  Q
    |||||||||||||||||||||||| |||||||| ||| |||||    
T  171447 acaaacattactcttgtggcctttctcaccacaattgtaacaa 171489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 4967 - 4874
Alignment:
Q  118 ttactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctatgct 211  Q
    ||||||||||| || || ||||||||| || ||||||| || |||| |||||  |||  | ||||||||||| |||| |||||||| |||||||    
T  4967 ttactcttgtgacccttctcaccacacctgtaacaaactatttcagcaggagtctcttccttcttgggcctcctctcgtcattcaacctatgct 4874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 152
Target Start/End: Complemental strand, 15618 - 15513
Alignment:
Q  47 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttttcaccacactt 146  Q
    ||||||||||||||||    ||||||||||  ||||||| ||| || |||||  | ||||  | ||||| ||| |||||||||||||| |||||||| ||    
T  15618 gcttgcaatcagctaatgtatgacccttcttgccacaccggaaacacttctttgcctcctctggacaaaaattgctcttgtggcctttctcaccacaatt 15519  T
Q  147 gaaaca 152  Q
    ||||||    
T  15518 gaaaca 15513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 17952 - 17920
Alignment:
Q  111 acaaacattactcttgtggcctttttcaccaca 143  Q
    |||||||||||||||||||||||| ||||||||    
T  17952 acaaacattactcttgtggcctttctcaccaca 17920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University