View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7178_low_14 (Length: 305)
Name: NF7178_low_14
Description: NF7178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7178_low_14 |
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Alignment Details
Target: chr2 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 15 - 290
Target Start/End: Complemental strand, 45164262 - 45163987
Alignment:
| Q |
15 |
gacatcatacctattattccattacttttaccagtggagcttgttaagtttttatgccgacgaaagaagatatacaatacgaacacgaagattccagcaa |
114 |
Q |
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| T |
45164262 |
gacatcatacctattattccattacttttaccagtggagcttgttaagtttttatgccgacgaaagaagatatacaatacgaacacgaagattccagcaa |
45164163 |
T |
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| Q |
115 |
gaagagcagaacaagcaattagtcctactagaattctcttattcaaattccggtggtgcactattctaacatcctgatttcctgtatcattaattataag |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45164162 |
gaagagcagaacaagcaattagtcctactagaattctcttattcaaattccggtggtgcactattctaacatcctgatttcctgtatcattaattataag |
45164063 |
T |
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| Q |
215 |
acaattcaacagatcattaagcaccatattctaaatcaatgtatagataaattcacataaaataagagcctgtttg |
290 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
45164062 |
acaattcaacagatcattaagcaccatattctaaatcaatgtatagataaattcacataaaataagagcccgtttg |
45163987 |
T |
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