View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7179_low_40 (Length: 250)
Name: NF7179_low_40
Description: NF7179
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7179_low_40 |
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Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 47122582 - 47122823
Alignment:
| Q |
1 |
ttctctgactcaaatatcatcctccggataaatttatataatcctttaacaaattgttttatctcaaataaaattattttcttataaaaacttaaaaatc |
100 |
Q |
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| T |
47122582 |
ttctctgactccaatgtcatcctccggataaatttatataatcctttaacaaattgttttatctcaaataaaattattttcttataaaaacttaaaaatc |
47122681 |
T |
|
| Q |
101 |
cacatcaaattgaaaattaccttgcaagcctaagtacttataatcaaaatggtcaagaaatgatattcacacattcatataagagacgcttttgctacaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47122682 |
cacatcaaattgaaaattaccttgcaagcctaagtacttataatcaaaatggtcaagaaatgatattcacacattcatataagagacgcttttgctacaa |
47122781 |
T |
|
| Q |
201 |
gctacatttgctaatttatctttaaaatacatgtttcatctc |
242 |
Q |
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||||||||||||||||||||||||| |||||||||||||||| |
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| T |
47122782 |
gctacatttgctaatttatctttaatatacatgtttcatctc |
47122823 |
T |
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