View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7180_high_17 (Length: 225)
Name: NF7180_high_17
Description: NF7180
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7180_high_17 |
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Alignment Details
Target: chr7 (Bit Score: 164; Significance: 8e-88; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 46061154 - 46060947
Alignment:
| Q |
1 |
tagaaaagtaagcaaaaattatgtgattaagactaagatacatgtagggaagggcgcaagaggtaaaacaaggaaataatgttagaaaccacatggtttg |
100 |
Q |
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| T |
46061154 |
tagacaagtaagcaaaaatgatgtgattaagactaagatacatgtagggaagggcgcaagaggtaaaacaaggaaataatgttagaaaccacatggtttg |
46061055 |
T |
|
| Q |
101 |
ttgttaaaatctgctgcacataattatcgcatatgagactcattaacattgtggatcatgttaat-nnnnnnnncctgtggatgaaacaataagacacat |
199 |
Q |
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| T |
46061054 |
tttttaaaatctgctgcacataattatcgcatatgagactcattaacattgtggatcatgttaataaaaaaaaacctgtggatgaaacaataagacacat |
46060955 |
T |
|
| Q |
200 |
acctatac |
207 |
Q |
| |
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|||||||| |
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| T |
46060954 |
acctatac |
46060947 |
T |
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