View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7180_low_16 (Length: 276)
Name: NF7180_low_16
Description: NF7180
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7180_low_16 |
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Alignment Details
Target: chr3 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 26492708 - 26492514
Alignment:
| Q |
1 |
ttcagcaacattattggttctctacaaaatgaaaccatctataagggaactctttcaagtggagttgagatagccgttgtatcctctgccgcgacttcat |
100 |
Q |
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| T |
26492708 |
ttcagcaacattattggttctctacaagatgaaaccatctataagggaactctttcaagtggagttgagatagccgttgtatcctctgccgcgacttcat |
26492609 |
T |
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| Q |
101 |
cactagactggtcaaaaaatatgcaagctcagttccgaaagaaggtattcaaaggcaacaaatatagcaaatgaatcacacattttctgatctgg |
195 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26492608 |
cactagactggtcaaaaaatatgcaagctcagttccgaaagaaggtattcaaaggcaacaaatatagcaaatgaatcacacattttctgatctgg |
26492514 |
T |
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