View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7180_low_20 (Length: 241)
Name: NF7180_low_20
Description: NF7180
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7180_low_20 |
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Alignment Details
Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 34289786 - 34289570
Alignment:
| Q |
1 |
ttcaaagtttccaagaaaacaactcaaggtcttcaagttggtcctctagaaatgatacctaaatttattcatcaagtaaacccaagtaacaaaaatagta |
100 |
Q |
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| T |
34289786 |
ttcaaagtttccaagaaaacaactcaaggtcttcaagttggtcctctagaaatgatacctaaatttattcatcaagtaaacccaagtaataaaaatagta |
34289687 |
T |
|
| Q |
101 |
aggtattttccacaactatactatatatagtctttatatataatactaatagcattatccacaatagttttttgagaagtctcttaccttataatatttt |
200 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |
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| T |
34289686 |
aggtattttccacaactatac----tatagtctttatatataatactaatagcattatccacaatag--ttttgagaaatctcttaccttataatatttt |
34289593 |
T |
|
| Q |
201 |
ctctgtttgcaggaagcaccagt |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
34289592 |
ctctgtttgcaggaagcaccagt |
34289570 |
T |
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