View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7181_low_5 (Length: 229)

Name: NF7181_low_5
Description: NF7181
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7181_low_5
NF7181_low_5
[»] chr5 (46 HSPs)
chr5 (36-202)||(34719668-34719834)
chr5 (36-202)||(39407369-39407535)
chr5 (34-202)||(27450592-27450760)
chr5 (34-202)||(26298272-26298440)
chr5 (34-202)||(26299808-26299976)
chr5 (34-202)||(34857308-34857476)
chr5 (36-210)||(34723663-34723830)
chr5 (34-202)||(19716144-19716307)
chr5 (31-202)||(39409098-39409255)
chr5 (31-202)||(34724765-34724924)
chr5 (35-202)||(27196039-27196206)
chr5 (37-202)||(10493949-10494114)
chr5 (41-202)||(3801375-3801536)
chr5 (83-202)||(32945032-32945151)
chr5 (41-171)||(1225319-1225449)
chr5 (35-167)||(36523713-36523849)
chr5 (35-140)||(28246693-28246799)
chr5 (41-202)||(38522872-38523033)
chr5 (41-196)||(3457794-3457953)
chr5 (41-202)||(10327898-10328059)
chr5 (97-195)||(5382843-5382941)
chr5 (41-202)||(15933128-15933292)
chr5 (41-171)||(20190626-20190756)
chr5 (39-169)||(30660951-30661081)
chr5 (44-167)||(20188944-20189067)
chr5 (37-115)||(28431030-28431108)
chr5 (44-171)||(2675987-2676114)
chr5 (39-169)||(14500750-14500880)
chr5 (39-153)||(26218013-26218127)
chr5 (39-153)||(41783291-41783405)
chr5 (57-202)||(27906082-27906227)
chr5 (136-202)||(28247473-28247539)
chr5 (73-202)||(39414181-39414311)
chr5 (73-166)||(1840734-1840827)
chr5 (41-202)||(18880160-18880321)
chr5 (41-166)||(19282161-19282286)
chr5 (41-202)||(31620836-31620997)
chr5 (35-203)||(1091086-1091253)
chr5 (46-153)||(11136067-11136173)
chr5 (41-119)||(32157031-32157109)
chr5 (60-95)||(34725175-34725210)
chr5 (73-202)||(29328044-29328172)
chr5 (83-194)||(40056382-40056493)
chr5 (75-169)||(33326462-33326556)
chr5 (69-187)||(17168469-17168589)
chr5 (35-195)||(24535969-24536129)
[»] chr1 (52 HSPs)
chr1 (34-202)||(38061189-38061357)
chr1 (35-202)||(28006312-28006479)
chr1 (35-202)||(5204480-5204647)
chr1 (50-202)||(7995948-7996100)
chr1 (35-202)||(40159641-40159808)
chr1 (35-202)||(47983217-47983384)
chr1 (37-202)||(29677530-29677695)
chr1 (39-202)||(7956290-7956453)
chr1 (35-202)||(15257182-15257349)
chr1 (73-202)||(24575909-24576038)
chr1 (35-194)||(50447303-50447462)
chr1 (41-202)||(39802778-39802939)
chr1 (44-171)||(35810689-35810816)
chr1 (41-171)||(42916156-42916286)
chr1 (41-171)||(46264986-46265116)
chr1 (46-196)||(48575097-48575247)
chr1 (73-202)||(31816568-31816697)
chr1 (110-202)||(6413276-6413368)
chr1 (43-202)||(45581019-45581178)
chr1 (41-202)||(24469828-24469989)
chr1 (41-202)||(32179826-32179987)
chr1 (41-202)||(47602873-47603034)
chr1 (100-171)||(15014342-15014413)
chr1 (43-202)||(20349116-20349275)
chr1 (41-167)||(7596361-7596487)
chr1 (37-167)||(27076561-27076691)
chr1 (41-202)||(36419069-36419230)
chr1 (43-193)||(45653451-45653601)
chr1 (41-202)||(15306461-15306622)
chr1 (41-202)||(31869562-31869723)
chr1 (44-171)||(25124927-25125054)
chr1 (44-171)||(42937045-42937172)
chr1 (41-202)||(36119040-36119200)
chr1 (115-202)||(7841665-7841751)
chr1 (57-164)||(14796572-14796679)
chr1 (57-164)||(14805446-14805553)
chr1 (39-150)||(43087529-43087640)
chr1 (112-202)||(12224586-12224676)
chr1 (39-153)||(19508494-19508608)
chr1 (41-151)||(37441248-37441358)
chr1 (73-202)||(23915608-23915737)
chr1 (75-202)||(7702837-7702964)
chr1 (44-171)||(23916781-23916908)
chr1 (80-202)||(44596524-44596646)
chr1 (39-146)||(13645247-13645354)
chr1 (100-171)||(15662976-15663047)
chr1 (39-202)||(21680667-21680830)
chr1 (44-139)||(40002865-40002960)
chr1 (39-136)||(8828303-8828400)
chr1 (57-143)||(33233620-33233706)
chr1 (64-108)||(15786879-15786923)
chr1 (73-169)||(51432247-51432343)
[»] chr4 (63 HSPs)
chr4 (36-202)||(1803461-1803622)
chr4 (31-195)||(24007921-24008085)
chr4 (35-202)||(12673039-12673206)
chr4 (35-202)||(40797792-40797959)
chr4 (35-202)||(46944555-46944722)
chr4 (35-202)||(51995040-51995207)
chr4 (35-202)||(80459-80626)
chr4 (39-202)||(9222143-9222304)
chr4 (35-162)||(25134536-25134663)
chr4 (35-195)||(55892003-55892163)
chr4 (69-196)||(13455697-13455824)
chr4 (63-194)||(34980523-34980654)
chr4 (52-195)||(51407967-51408110)
chr4 (39-155)||(44378216-44378332)
chr4 (35-195)||(28265691-28265848)
chr4 (44-189)||(19455182-19455327)
chr4 (73-202)||(49405646-49405775)
chr4 (44-171)||(36156336-36156463)
chr4 (44-202)||(48802486-48802645)
chr4 (41-175)||(15697121-15697255)
chr4 (37-139)||(50710844-50710946)
chr4 (35-164)||(25102646-25102775)
chr4 (41-174)||(43798262-43798395)
chr4 (35-187)||(39736645-39736797)
chr4 (41-202)||(9469745-9469906)
chr4 (41-202)||(11055237-11055398)
chr4 (41-202)||(19852946-19853107)
chr4 (41-202)||(21441549-21441710)
chr4 (41-202)||(50605976-50606137)
chr4 (41-202)||(53369840-53370001)
chr4 (43-202)||(22184473-22184632)
chr4 (41-195)||(36543749-36543903)
chr4 (41-202)||(45674803-45674964)
chr4 (41-202)||(48977544-48977705)
chr4 (73-153)||(7505529-7505609)
chr4 (41-169)||(22721296-22721423)
chr4 (73-171)||(24550077-24550176)
chr4 (44-171)||(48339141-48339268)
chr4 (43-159)||(56224115-56224231)
chr4 (59-202)||(12789563-12789706)
chr4 (41-196)||(44791260-44791415)
chr4 (41-164)||(49820950-49821073)
chr4 (75-202)||(50146929-50147056)
chr4 (73-167)||(6866149-6866243)
chr4 (72-202)||(26632935-26633065)
chr4 (39-153)||(52706183-52706297)
chr4 (41-202)||(27891355-27891515)
chr4 (44-169)||(43812101-43812226)
chr4 (41-202)||(52813569-52813730)
chr4 (75-167)||(52733747-52733838)
chr4 (73-184)||(9906385-9906496)
chr4 (115-202)||(9874219-9874306)
chr4 (73-196)||(48151143-48151266)
chr4 (112-202)||(4274567-4274657)
chr4 (121-194)||(28470867-28470939)
chr4 (44-196)||(32397715-32397867)
chr4 (122-169)||(16742380-16742427)
chr4 (69-148)||(26127561-26127640)
chr4 (43-115)||(41822079-41822153)
chr4 (41-115)||(16742423-16742497)
chr4 (43-108)||(38493082-38493147)
chr4 (73-150)||(49083297-49083374)
chr4 (87-160)||(50137407-50137480)
[»] chr7 (52 HSPs)
chr7 (35-202)||(18250004-18250171)
chr7 (35-202)||(26719782-26719949)
chr7 (35-202)||(46573623-46573790)
chr7 (35-202)||(17025372-17025539)
chr7 (35-202)||(18740229-18740396)
chr7 (35-202)||(33898955-33899122)
chr7 (35-202)||(35543567-35543731)
chr7 (35-202)||(21760594-21760761)
chr7 (39-202)||(36472410-36472573)
chr7 (37-192)||(49034245-49034400)
chr7 (35-202)||(33019269-33019435)
chr7 (35-165)||(30919389-30919519)
chr7 (41-202)||(7447849-7448010)
chr7 (35-184)||(32356928-32357077)
chr7 (41-187)||(29037806-29037952)
chr7 (69-202)||(31491816-31491949)
chr7 (41-202)||(5776141-5776302)
chr7 (41-202)||(36926972-36927133)
chr7 (41-202)||(37334251-37334412)
chr7 (41-171)||(42072056-42072186)
chr7 (41-171)||(45176218-45176348)
chr7 (73-202)||(33935513-33935642)
chr7 (41-202)||(43052845-43053006)
chr7 (100-171)||(37401608-37401679)
chr7 (43-169)||(22075038-22075164)
chr7 (40-202)||(28949769-28949931)
chr7 (41-202)||(44421912-44422074)
chr7 (39-153)||(45055699-45055813)
chr7 (41-151)||(48505850-48505960)
chr7 (41-202)||(5794947-5795108)
chr7 (73-154)||(23237576-23237657)
chr7 (73-202)||(33124700-33124829)
chr7 (73-169)||(10618926-10619022)
chr7 (39-153)||(40480110-40480225)
chr7 (81-152)||(48634460-48634531)
chr7 (39-153)||(11595856-11595970)
chr7 (41-202)||(665858-666019)
chr7 (100-171)||(27231581-27231652)
chr7 (73-164)||(37101148-37101238)
chr7 (41-151)||(26216245-26216355)
chr7 (41-202)||(222237-222398)
chr7 (41-202)||(3930727-3930888)
chr7 (41-202)||(20400969-20401130)
chr7 (44-171)||(3942152-3942279)
chr7 (73-196)||(23227016-23227139)
chr7 (73-196)||(23236169-23236292)
chr7 (126-193)||(46652653-46652720)
chr7 (73-159)||(17608717-17608803)
chr7 (41-150)||(33171597-33171706)
chr7 (100-171)||(37106858-37106929)
chr7 (41-139)||(15434216-15434314)
chr7 (75-145)||(37239840-37239910)
[»] chr3 (33 HSPs)
chr3 (35-202)||(12710664-12710831)
chr3 (35-196)||(40943523-40943684)
chr3 (35-196)||(30662148-30662309)
chr3 (35-194)||(20550221-20550380)
chr3 (41-202)||(26049551-26049712)
chr3 (35-145)||(54432259-54432369)
chr3 (37-192)||(15822370-15822525)
chr3 (40-194)||(48730856-48731010)
chr3 (41-202)||(9505132-9505293)
chr3 (44-171)||(54393485-54393612)
chr3 (44-171)||(33438773-33438900)
chr3 (41-195)||(39469549-39469703)
chr3 (41-181)||(41609856-41609996)
chr3 (41-149)||(46293277-46293385)
chr3 (41-169)||(52934780-52934908)
chr3 (37-95)||(49026583-49026641)
chr3 (41-174)||(26136301-26136434)
chr3 (41-202)||(32689137-32689298)
chr3 (73-202)||(52199429-52199558)
chr3 (39-150)||(5418644-5418755)
chr3 (112-171)||(45714735-45714794)
chr3 (41-159)||(44574494-44574612)
chr3 (41-153)||(50965371-50965484)
chr3 (41-153)||(51068506-51068619)
chr3 (73-196)||(31589622-31589745)
chr3 (41-167)||(28242551-28242677)
chr3 (83-150)||(25253712-25253779)
chr3 (40-202)||(19560785-19560947)
chr3 (73-150)||(1674629-1674706)
chr3 (57-202)||(23206319-23206463)
chr3 (74-119)||(29536598-29536643)
chr3 (41-169)||(1072753-1072881)
chr3 (44-120)||(53529683-53529759)
[»] chr6 (22 HSPs)
chr6 (37-202)||(3081729-3081894)
chr6 (35-202)||(13311984-13312153)
chr6 (37-202)||(7437268-7437433)
chr6 (37-194)||(18099780-18099937)
chr6 (44-171)||(5640294-5640421)
chr6 (41-202)||(4441312-4441473)
chr6 (73-174)||(18095519-18095620)
chr6 (41-196)||(6999235-6999390)
chr6 (44-167)||(10961842-10961965)
chr6 (83-202)||(17441168-17441287)
chr6 (44-166)||(27984937-27985059)
chr6 (44-167)||(9950806-9950929)
chr6 (41-169)||(11460058-11460178)
chr6 (39-153)||(33110424-33110538)
chr6 (41-202)||(1501816-1501977)
chr6 (41-151)||(10346689-10346799)
chr6 (41-194)||(8200610-8200752)
chr6 (73-167)||(32163541-32163635)
chr6 (39-146)||(22295882-22295989)
chr6 (73-187)||(21093270-21093384)
chr6 (75-136)||(30774040-30774101)
chr6 (110-174)||(16799763-16799827)
[»] scaffold0171 (1 HSPs)
scaffold0171 (54-202)||(21069-21216)
[»] chr2 (38 HSPs)
chr2 (37-202)||(40458885-40459050)
chr2 (43-202)||(11006985-11007142)
chr2 (46-169)||(13829851-13829974)
chr2 (35-159)||(1094419-1094543)
chr2 (72-202)||(27464583-27464713)
chr2 (42-171)||(32713038-32713168)
chr2 (41-194)||(10412408-10412561)
chr2 (44-171)||(38409613-38409740)
chr2 (41-202)||(3409199-3409360)
chr2 (35-202)||(29806879-29807035)
chr2 (42-171)||(34116215-34116344)
chr2 (44-171)||(11027879-11028006)
chr2 (41-171)||(26436322-26436452)
chr2 (44-153)||(2647034-2647143)
chr2 (41-202)||(27634639-27634800)
chr2 (46-171)||(30713129-30713254)
chr2 (41-202)||(33831463-33831624)
chr2 (41-194)||(36538624-36538777)
chr2 (37-169)||(2328335-2328467)
chr2 (43-188)||(12070539-12070684)
chr2 (73-202)||(44740494-44740623)
chr2 (41-151)||(34064673-34064783)
chr2 (44-169)||(27902483-27902607)
chr2 (41-202)||(41959111-41959272)
chr2 (113-184)||(31000880-31000951)
chr2 (83-202)||(33163991-33164110)
chr2 (100-202)||(17616294-17616396)
chr2 (41-150)||(2578047-2578156)
chr2 (102-171)||(20203756-20203825)
chr2 (75-196)||(24844683-24844804)
chr2 (85-194)||(41332243-41332352)
chr2 (77-128)||(17369074-17369125)
chr2 (94-174)||(28968841-28968921)
chr2 (123-202)||(9753156-9753235)
chr2 (83-202)||(16544016-16544135)
chr2 (41-119)||(39690138-39690216)
chr2 (87-152)||(17503437-17503502)
chr2 (43-96)||(18667721-18667774)
[»] scaffold0135 (1 HSPs)
scaffold0135 (39-202)||(32796-32957)
[»] scaffold0063 (1 HSPs)
scaffold0063 (72-187)||(51328-51443)
[»] chr8 (16 HSPs)
chr8 (73-184)||(1091727-1091838)
chr8 (37-192)||(22563970-22564125)
chr8 (41-202)||(453451-453612)
chr8 (112-202)||(43384833-43384923)
chr8 (73-167)||(27189128-27189222)
chr8 (41-181)||(11161540-11161680)
chr8 (44-167)||(33280023-33280146)
chr8 (44-171)||(34516109-34516236)
chr8 (112-202)||(12378391-12378481)
chr8 (39-150)||(34655001-34655112)
chr8 (39-153)||(43967476-43967590)
chr8 (41-202)||(3307902-3308063)
chr8 (113-202)||(39478090-39478179)
chr8 (50-169)||(23181132-23181251)
chr8 (73-152)||(9412585-9412664)
chr8 (35-89)||(39478052-39478106)
[»] scaffold0444 (1 HSPs)
scaffold0444 (39-155)||(825-941)
[»] scaffold0224 (1 HSPs)
scaffold0224 (41-171)||(7350-7480)
[»] scaffold0002 (1 HSPs)
scaffold0002 (73-187)||(96280-96394)
[»] scaffold0022 (1 HSPs)
scaffold0022 (41-202)||(124492-124653)
[»] scaffold0260 (1 HSPs)
scaffold0260 (43-202)||(11439-11598)
[»] scaffold0223 (1 HSPs)
scaffold0223 (83-202)||(14436-14555)
[»] scaffold0204 (1 HSPs)
scaffold0204 (44-171)||(26663-26790)
[»] scaffold0954 (1 HSPs)
scaffold0954 (73-154)||(243-324)
[»] scaffold0316 (1 HSPs)
scaffold0316 (41-202)||(19264-19425)
[»] scaffold0263 (1 HSPs)
scaffold0263 (76-149)||(17238-17311)
[»] scaffold0025 (1 HSPs)
scaffold0025 (83-202)||(11400-11519)


Alignment Details
Target: chr5 (Bit Score: 147; Significance: 1e-77; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 36 - 202
Target Start/End: Complemental strand, 34719834 - 34719668
Alignment:
Q  36 ctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttca 135  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  34719834 ctggttcatgaaccaaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaagttca 34719735  T
Q  136 tgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  34719734 tgaatcaagttcaacgaatcaattatcgaatcaaatctcgcactattttcgagttggttcgtttcat 34719668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 36 - 202
Target Start/End: Original strand, 39407369 - 39407535
Alignment:
Q  36 ctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttca 135  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  39407369 ctggttcatgaaccaaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttca 39407468  T
Q  136 tgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||    
T  39407469 tgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactatttttgagttggttcggttcat 39407535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 34 - 202
Target Start/End: Complemental strand, 27450760 - 27450592
Alignment:
Q  34 ggctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggtt 133  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27450760 ggctggttcatgaaccaaacgagtcgaaccacatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggtt 27450661  T
Q  134 catgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  27450660 catgaatcaaattcaacgaatcaattatcgaatcgaatctcgcactattttcgagttggttcggttcat 27450592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 34 - 202
Target Start/End: Original strand, 26298272 - 26298440
Alignment:
Q  34 ggctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggtt 133  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  26298272 ggctggttcatgaaccaaacgagtcgaaccatatttagtttaagttcaactcatttatttaacgagcttaattttaaactcaagtttgactcattaggtt 26298371  T
Q  134 catgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||| |||||    
T  26298372 catgaatcaagttcaacgaatcaattatcgaatcgaatctcacactatttttgagttggttcggttcat 26298440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 34 - 202
Target Start/End: Original strand, 26299808 - 26299976
Alignment:
Q  34 ggctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggtt 133  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  26299808 ggctggttcatgaatcaaacgagtcgaaccatatttagttcaagttcaattcatttatttaacgagcttaattttaaactcaagtttgactcattaggtt 26299907  T
Q  134 catgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  26299908 catgaatgaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgagttggttcggttcat 26299976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 34 - 202
Target Start/End: Original strand, 34857308 - 34857476
Alignment:
Q  34 ggctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggtt 133  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  34857308 ggctggttcatgaaccaaacgagtcgaaccatatttagtttaagtttaactcatttatttaacgagcttaattttaaactcaagttcgactcattagatt 34857407  T
Q  134 catgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    |||||||||||||||||||||||||||| |||| ||||||| |||||||||||| |||||||| |||||    
T  34857408 catgaatcaagttcaacgaatcaattattgaattgaatctcacactattttcgagttggttcggttcat 34857476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 36 - 210
Target Start/End: Complemental strand, 34723830 - 34723663
Alignment:
Q  36 ctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttca 135  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  34723830 ctggttcatgaaccaaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaaattcgactcattaggttca 34723731  T
Q  136 tgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcatcctacgtg 210  Q
    ||||||||||||||||||||||||||       |||||| |||||||||||| |||||||||||||| |||||||    
T  34723730 tgaatcaagttcaacgaatcaattat-------aatctcacactattttcgagttggttcgtttcattctacgtg 34723663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 34 - 202
Target Start/End: Original strand, 19716144 - 19716307
Alignment:
Q  34 ggctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggtt 133  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  19716144 ggctggttcatgaaccaaacgagtcaaaccatatttagttcaagttcaattcatttatttaacgagcttaattttaaacttaagttcgactcattaggtt 19716243  T
Q  134 catgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||||||||||||||||||||     ||||||||||||||||||||||| |||||||| |||||    
T  19716244 catgaatcaagttcaacgaatcaatt-----atcgaatctcgcactattttcgagttggttcggttcat 19716307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 31 - 202
Target Start/End: Original strand, 39409098 - 39409255
Alignment:
Q  31 tcaggctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattag 130  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  39409098 tcagactggttcatgaaccaaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattag 39409197  T
Q  131 gttcatgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||              ||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  39409198 gttcat--------------gaatcaattatcgaatcgaatctcgcactattttcgagttggttcggttcat 39409255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 31 - 202
Target Start/End: Complemental strand, 34724924 - 34724765
Alignment:
Q  31 tcaggctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattag 130  Q
    ||||||||||||||||||||||||| |||||||            ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  34724924 tcaggctggttcatgaaccaaacgagtcgaacc------------agttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattag 34724837  T
Q  131 gttcatgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||||| | |||||||| |||||    
T  34724836 gttcatgaatcaagttcaacgaatcaattatcaaatcgaatctcacactattttcaagttggttcggttcat 34724765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 35 - 202
Target Start/End: Original strand, 27196039 - 27196206
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    |||||||||||||||| |||| ||||| |||| |||| ||||||||||||| ||||| |||| ||||||||||| ||||||||||||||||||| |||||    
T  27196039 gctggttcatgaaccagacgagtcgaatcatacttagctcaagttcaactcctttatctaacgagcttaattttcaactcaagttcgactcatttggttc 27196138  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||| ||| || |||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||    
T  27196139 atgaaccaaatttaacgaatcaattatcgaatcgagtctcgaactattttcgagttggttcggttcat 27196206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 37 - 202
Target Start/End: Original strand, 10493949 - 10494114
Alignment:
Q  37 tggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcat 136  Q
    ||||||||||||||||||| |||||| ||| |||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||| ||||  |    
T  10493949 tggttcatgaaccaaacgagtcgaactatacttagttcaagttcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggtttgt 10494048  T
Q  137 gaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||| ||||||||||||| ||||||| ||||||||| ||  |||||||| || |||||||| |||||    
T  10494049 gaaccaagttcaacgaaccaattattgaatcgaatatcaaactatttttgagttggttcggttcat 10494114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 41 - 202
Target Start/End: Complemental strand, 3801536 - 3801375
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| ||||||||| | |||||||||||||||||||||| ||||| | ||||||||| | |||||||||| |||||| ||||||||||     
T  3801536 tcatgaacctaacgaatcgaaccatttatagttcaagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaac 3801437  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||| ||| ||||| |||| ||||||  || ||||| ||||| |||||||| |||||    
T  3801436 caagttcaatgaaccaattgtcgagtcgaattacgaactatattcgagttggttcggttcat 3801375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 83 - 202
Target Start/End: Complemental strand, 32945151 - 32945032
Alignment:
Q  83 ctcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactatt 182  Q
    ||||||||||| || |||||||||||  |||||||||||||||||| |||||||||| |||||| ||||||||||||| |||||||| | ||| ||||||    
T  32945151 ctcatttatttgacgagcttaatttttgactcaagttcgactcatttggttcatgaaccaagtttaacgaatcaattaccgaatcgagtttcgaactatt 32945052  T
Q  183 ttcgaattggttcgtttcat 202  Q
    ||||| |||||||| |||||    
T  32945051 ttcgagttggttcggttcat 32945032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 1225319 - 1225449
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||||||||| |||||  |||  ||||||||||||   |||||||||| || ||||||||||| ||||||||||||||||||| ||||||| ||     
T  1225319 tcatgaaccaaacgagtcgaattatacgtagttcaagttcggttcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcataaac 1225418  T
Q  141 caagttcaacgaatcaattatcgaatcgaat 171  Q
     |||||||||||| |||||||||||||||||    
T  1225419 taagttcaacgaaacaattatcgaatcgaat 1225449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 35 - 167
Target Start/End: Original strand, 36523713 - 36523849
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaag----cttaattttaaactcaagttcgactcattag 130  Q
    ||||||||||||||||||||| || ||| |||  ||| ||||||||| ||||||||||||||||     ||||||||| || |||||||||||||||| |    
T  36523713 gctggttcatgaaccaaacgaatcaaactatacatagctcaagttcagctcatttatttaacaaattaacttaatttttaaatcaagttcgactcatttg 36523812  T
Q  131 gttcatgaatcaagttcaacgaatcaattatcgaatc 167  Q
    ||||||||| ||||||||| ||||| |||||||||||    
T  36523813 gttcatgaaccaagttcaatgaatctattatcgaatc 36523849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 140
Target Start/End: Original strand, 28246693 - 28246799
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatattta-gttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggtt 133  Q
    ||||||||||||||||||||| ||||| |||| ||| |||||||||||||||||||||||||  || |||||||| ||||||||||||||||||| ||||    
T  28246693 gctggttcatgaaccaaacgagtcgaatcatacttaagttcaagttcaactcatttatttaatgagtttaattttcaactcaagttcgactcatttggtt 28246792  T
Q  134 catgaat 140  Q
    | |||||    
T  28246793 cgtgaat 28246799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 41 - 202
Target Start/End: Complemental strand, 38523033 - 38522872
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| ||||||||| | ||||||||||||| |||||||| ||||| | ||||||||| | |||||||| | |||||| ||||||||||     
T  38523033 tcatgaacccaacgaatcgaaccatctatagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtttggctcatttggttcatgaac 38522934  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||| | | |||||||||| || |||  || ||||| ||||| |||||||| |||||    
T  38522933 caagttcaatggaccaattatcgagtcaaattacgaactatattcgagttggttcggttcat 38522872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 41 - 196
Target Start/End: Original strand, 3457794 - 3457953
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaa----actcaagttcgactcattaggttcat 136  Q
    ||||||||||||||| ||  || |||| ||| |||||| ||||||||||||||||| | ||||||||| |    |||||||||||| ||||| ||||||     
T  3457794 tcatgaaccaaacgagtcagactatatatagctcaagtccaactcatttatttaacgaacttaatttttatttaactcaagttcgattcatttggttcaa 3457893  T
Q  137 gaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcg 196  Q
    ||||| |||||||||||  ||||| | |||||||||||  ||||||||||| ||||||||    
T  3457894 gaatcgagttcaacgaactaattaccaaatcgaatctcaaactattttcgagttggttcg 3457953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 10327898 - 10328059
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    |||||||| |||||| |||||| |||  ||| ||||||| || ||||||||||  | || ||||| ||  ||||||||| || ||||| |||||||||||    
T  10327898 tcatgaacaaaacgagtcgaactatacatagctcaagtttaattcatttatttgtcgagtttaatattcgactcaagtttgattcatttggttcatgaat 10327997  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    |||||||||||||||||||| |||||||| | | | || |||||||| |||||||| |||||    
T  10327998 caagttcaacgaatcaattaccgaatcgagttttgaacaattttcgagttggttcggttcat 10328059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 97 - 195
Target Start/End: Complemental strand, 5382941 - 5382843
Alignment:
Q  97 aagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttc 195  Q
    |||| |||||||||||||| ||||||||| || ||||||||||||||||||||||||| ||||| |||||||| ||||| ||| ||||| | |||||||    
T  5382941 aagcctaattttaaactcaggttcgactcgtttggttcatgaatcaagttcaacgaattaattaccgaatcgagtctcgaactcttttcaagttggttc 5382843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 15933128 - 15933292
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaatttta---aactcaagttcgactcattaggttcatg 137  Q
    ||||||||||||||| ||||||||| | ||| ||||||||  |||||||||||||| | ||||||  ||   | |||| |||| ||||||||||||||||    
T  15933128 tcatgaaccaaacgagtcgaaccatctatagctcaagttcggctcatttatttaacgaacttaatagtatttagctcatgttcaactcattaggttcatg 15933227  T
Q  138 aatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    || |||||||||||||| || | |||| |||||| ||| |||||  |||| |||||||| |||||    
T  15933228 aaccaagttcaacgaattaactgtcgagtcgaatttcgaactatactcgagttggttcggttcat 15933292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 20190756 - 20190626
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    |||||||||||||||||||||| | || ||| ||||||||| |||| |||   | | | ||||||||| | |||||||||| |||||| ||||||||||     
T  20190756 tcatgaaccaaacgattcgaactacatatagctcaagttcagctcaattaggcagcgaacttaattttgagctcaagttcggctcatttggttcatgaac 20190657  T
Q  141 caagttcaacgaatcaattatcgaatcgaat 171  Q
    ||||||| | |||||||||||||||||||||    
T  20190656 caagttcgatgaatcaattatcgaatcgaat 20190626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 39 - 169
Target Start/End: Complemental strand, 30661081 - 30660951
Alignment:
Q  39 gttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatga 138  Q
    ||||||||||||||||| |||||| |||| ||||||| |||| |||||| || ||||||| ||||||||| |||| || |||  ||||||  ||||||||    
T  30661081 gttcatgaaccaaacgagtcgaactatatatagttcatgttcgactcatataattaacaaacttaattttcaacttaaattcagctcatttagttcatga 30660982  T
Q  139 atcaagttcaacgaatcaattatcgaatcga 169  Q
    |  ||||||||  ||||||||||||||||||    
T  30660981 actaagttcaataaatcaattatcgaatcga 30660951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 44 - 167
Target Start/End: Original strand, 20188944 - 20189067
Alignment:
Q  44 tgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaa 143  Q
    |||||||||||| |||||| | || ||| ||||||||| |||| ||| || || | ||||||||| |  ||||||||| |||||| |||||||||| |||    
T  20188944 tgaaccaaacgagtcgaactacatatagctcaagttcagctcaattagttgacgaacttaatttttagttcaagttcggctcatttggttcatgaaccaa 20189043  T
Q  144 gttcaacgaatcaattatcgaatc 167  Q
    |||| |||||||||||||||||||    
T  20189044 gttcgacgaatcaattatcgaatc 20189067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 28431030 - 28431108
Alignment:
Q  37 tggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactca 115  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||| ||| ||||||||||  |||||||||| ||||||    
T  28431030 tggttcatgaaccaaacgatttgaaccttatttagttcaagttcagctcgtttatttaacgggcttaattttcaactca 28431108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 44 - 171
Target Start/End: Original strand, 2675987 - 2676114
Alignment:
Q  44 tgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaa 143  Q
    |||||||||||| |||||  | || |||||||||||||| | | ||| || || | ||||||||| | ||||||||||||||||| |||||||||| | |    
T  2675987 tgaaccaaacgagtcgaattacatatagttcaagttcaatttaattagttgacgaacttaattttcagctcaagttcgactcatttggttcatgaaccta 2676086  T
Q  144 gttcaacgaatcaattatcgaatcgaat 171  Q
    |||| ||||||||||| ||| |||||||    
T  2676087 gttcgacgaatcaattgtcggatcgaat 2676114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 169
Target Start/End: Complemental strand, 14500880 - 14500750
Alignment:
Q  39 gttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatga 138  Q
    |||| |||||||||||| |||| | |||| ||  |||||||||||||||| | ||||| | |||||| || | |||||||||| ||| || |||||||||    
T  14500880 gttcgtgaaccaaacgagtcgagctatatataactcaagttcaactcattcagttaacgaacttaatctttagctcaagttcggctcgtttggttcatga 14500781  T
Q  139 atcaagttcaacgaatcaattatcgaatcga 169  Q
    | |||||||||||||  ||||||||| ||||    
T  14500780 accaagttcaacgaactaattatcgagtcga 14500750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 153
Target Start/End: Original strand, 26218013 - 26218127
Alignment:
Q  39 gttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatga 138  Q
    |||| |||||||||||| |||||| |||| ||  ||||||| |||||||||| ||||| | |||||| || | |||||||||| ||| || |||||||||    
T  26218013 gttcgtgaaccaaacgagtcgaactatatataactcaagtttaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatga 26218112  T
Q  139 atcaagttcaacgaa 153  Q
    | |||||||||||||    
T  26218113 accaagttcaacgaa 26218127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 153
Target Start/End: Original strand, 41783291 - 41783405
Alignment:
Q  39 gttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatga 138  Q
    |||| |||||||||||  |||||| | || ||  |||||||||||||||||| ||||| | |||||| || | |||||||||| |||||| |||||||||    
T  41783291 gttcgtgaaccaaacgggtcgaactacatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcatttggttcatga 41783390  T
Q  139 atcaagttcaacgaa 153  Q
    | |||||||||||||    
T  41783391 accaagttcaacgaa 41783405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 202
Target Start/End: Original strand, 27906082 - 27906227
Alignment:
Q  57 tcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatca 156  Q
    |||||| |||| ||| ||||||||| |||||||| ||||| | ||||||||| | ||||||| |  ||| ||||||||||||| ||||||||||| || |    
T  27906082 tcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggatta 27906181  T
Q  157 attatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
      |||||| |||||| ||| |||||  |||| |||||||| |||||    
T  27906182 gatatcgagtcgaatgtcgaactataatcgagttggttcggttcat 27906227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 202
Target Start/End: Original strand, 28247473 - 28247539
Alignment:
Q  136 tgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    |||| |||||||||||||||||||||| |||| ||| ||| |||||||||||||||||||| |||||    
T  28247473 tgaaccaagttcaacgaatcaattatcaaatcaaatatcgaactattttcgaattggttcggttcat 28247539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 202
Target Start/End: Original strand, 39414181 - 39414311
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaa-gttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaat 171  Q
    ||||||||| |||||||||||||| | ||||||||| |||| || ||||  ||||||||||||||| | |||||||||||| | |||| ||||||  | |    
T  39414181 tcaagttcagctcatttatttaacgaacttaatttttaacttaaagttcagctcattaggttcatggaccaagttcaacgagttaattgtcgaattaagt 39414280  T
Q  172 ctcgcactattttcgaattggttcgtttcat 202  Q
     ||| |||||| |||| |||||||| |||||    
T  39414281 ttcgaactattgtcgagttggttcggttcat 39414311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 73 - 166
Target Start/End: Complemental strand, 1840827 - 1840734
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaat 166  Q
    ||||||||| ||||||||||| || | ||||||||| | |||||||||  |||||| |||||||||| |||||||||||| | |||| ||||||    
T  1840827 tcaagttcagctcatttatttcacgaacttaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacgagttaattgtcgaat 1840734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 18880160 - 18880321
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||| ||| ||||| | |||| |||| ||| ||||||||| |||||||| ||||| | ||||||||| | || |||| |  ||| |||||||||||||     
T  18880160 tcatgtacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagcttaagtccagctcgttaggttcatgaac 18880259  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||||| || |  |||||| |||||| ||| |||||  |||| |||||||| |||||    
T  18880260 caagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcat 18880321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 41 - 166
Target Start/End: Complemental strand, 19282286 - 19282161
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||| ||| ||| |||||| ||||  |||||||||||| ||||| || ||||| | | ||||||| | |||||||||  |||||| ||||||||||     
T  19282286 tcatgaatcaaccgagtcgaactatatacagttcaagttcagctcatctacttaacgaacctaattttcagctcaagttcagctcatttggttcatgaac 19282187  T
Q  141 caagttcaacgaatcaattatcgaat 166  Q
    |||||||||||| | |||| ||||||    
T  19282186 caagttcaacgagttaattgtcgaat 19282161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 31620836 - 31620997
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    |||| |||||||||| |||||  |||| ||  ||||||||| |||||||| ||||| | |||||| || | || |||||| ||||||||||||||||||     
T  31620836 tcattaaccaaacgagtcgaattatatgtaactcaagttcagctcatttaattaacgaacttaatattcagctgaagttcaactcattaggttcatgaac 31620935  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||| ||||| | |  |||| |||| |||||| ||| ||||| ||| | |||||||| |||||    
T  31620936 caaattcaatggactaattgtcgagtcgaatttcgaactatattcaagttggttcggttcat 31620997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 203
Target Start/End: Original strand, 1091086 - 1091253
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    ||||||||||||||||||  | |||||  ||   ||| |||||||||||||||||||||||  | |||| |||||| |||||||||||| ||||  |||     
T  1091086 gctggttcatgaaccaaataaatcgaattatgaatagctcaagttcaactcatttatttaatgaacttatttttaa-ctcaagttcgacccatttagttt 1091184  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcatc 203  Q
     ||||  |||||||||||||  ||||||||||||| ||| | ||| ||||  | |||||||| ||||||    
T  1091185 gtgaactaagttcaacgaattcattatcgaatcgagtcttgaactttttttaagttggttcggttcatc 1091253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 46 - 153
Target Start/End: Complemental strand, 11136173 - 11136067
Alignment:
Q  46 aaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagt 145  Q
    |||||||||| |||||| |||| ||  |||||||||||||||||| ||||| | |||||| || | |||||||||| ||| || ||||| |||| |||||    
T  11136173 aaccaaacgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttc-tgaaccaagt 11136075  T
Q  146 tcaacgaa 153  Q
    ||||||||    
T  11136074 tcaacgaa 11136067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 32157109 - 32157031
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagtt 119  Q
    ||||||||  ||||| ||||||||| | ||||||||||||| |||||||| ||||| | ||||||||| ||||||||||    
T  32157109 tcatgaacttaacgaatcgaaccatctatagttcaagttcagctcatttaattaacgaacttaattttcaactcaagtt 32157031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 95
Target Start/End: Original strand, 34725175 - 34725210
Alignment:
Q  60 aaccatatttagttcaagttcaactcatttatttaa 95  Q
    ||||||||||||||||||||||||||||||||||||    
T  34725175 aaccatatttagttcaagttcaactcatttatttaa 34725210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 202
Target Start/End: Original strand, 29328044 - 29328172
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatc 172  Q
    ||||||| | |||||||| ||||| | ||||||||| | ||||||| |  ||  ||||||||||||||||||||||||| || || |||||| ||||||     
T  29328044 tcaagttaagctcatttaattaacgaacttaattttcagctcaagtccagctg-ttaggttcatgaatcaagttcaacggattaaatatcgagtcgaatg 29328142  T
Q  173 tcgcactattttcgaattggttcgtttcat 202  Q
    ||| |||||  |||| || ||||| |||||    
T  29328143 tcgaactataatcgagtttgttcggttcat 29328172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 40056493 - 40056382
Alignment:
Q  83 ctcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactatt 182  Q
    |||||||||||||| | ||||||||| | ||||| ||  ||| ||| |||||||||| ||| ||||||||   |||| ||||||||||| ||  ||||||    
T  40056493 ctcatttatttaacgaacttaattttcatctcaaatttaacttatttggttcatgaaccaaattcaacgagataattgtcgaatcgaatttcaaactatt 40056394  T
Q  183 ttcgaattggtt 194  Q
     |||| ||||||    
T  40056393 atcgagttggtt 40056382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 169
Target Start/End: Original strand, 33326462 - 33326556
Alignment:
Q  75 aagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcga 169  Q
    ||||| ||||||||||||||||| |||||| ||| || | | ||| ||||||||   || || |||||| ||||| ||||||||||| |||||||    
T  33326462 aagtttaactcatttatttaacatgcttaactttcaatttatgtttgactcatttaatttataaatcaaattcaatgaatcaattattgaatcga 33326556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 17168589 - 17168469
Alignment:
Q  69 tagttcaagttcaactcatttatttaacaagcttaatttta--aactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaat 166  Q
    ||||||||||||||||| ||||| |||| |  ||||||||   | || ||||||| |||||| ||||  |||| |||||||||| ||| || ||||||||    
T  17168589 tagttcaagttcaactcgtttatataacgaagttaattttttgagcttaagttcggctcatttggtttgtgaaccaagttcaacaaattaaatatcgaat 17168490  T
Q  167 cgaatctcgcactattttcga 187  Q
    | | ||||  |||||||||||    
T  17168489 ctagtctcaaactattttcga 17168469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 195
Target Start/End: Original strand, 24535969 - 24536129
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    |||||||||||| |||||| | |||| ||| |  ||||| || |||||||| |||||||||| | ||||||||| | ||||| ||   |||||| | |||    
T  24535969 gctggttcatgatccaaactagtcgagccaaacatagtttaaattcaactcgtttatttaacgaacttaattttgagctcaaatttagctcatttgattc 24536068  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttc 195  Q
    ||||| ||  |||||| ||| ||||||| |||  | ||| | ||||||||| | |||||||    
T  24536069 atgaaccagattcaacaaattaattatcaaattaagtcttgaactattttcaagttggttc 24536129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 141; Significance: 4e-74; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 34 - 202
Target Start/End: Complemental strand, 38061357 - 38061189
Alignment:
Q  34 ggctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggtt 133  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  38061357 ggctggttcatgaaccaaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaacttaagttcgactcattaggtt 38061258  T
Q  134 catgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||    
T  38061257 cataaatcaagttcaacgaatcaattatcaaatcgaatctcgcactattttcgagttggttcggttcat 38061189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 35 - 202
Target Start/End: Original strand, 28006312 - 28006479
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    |||||||||||||| |||||| |||||||||| | |  |||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||| |||||    
T  28006312 gctggttcatgaactaaacgagtcgaaccatactcaactcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttc 28006411  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||| |||||||||||| |||||||||||||||||||||| ||||||||||| |||||||| |||||    
T  28006412 atgaaccaagttcaacgagtcaattatcgaatcgaatctcgaactattttcgagttggttcggttcat 28006479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 35 - 202
Target Start/End: Complemental strand, 5204647 - 5204480
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    ||||||||||||||||||||| |||||||||| | | ||||||||| ||||||||||||||| | ||||||||| ||||||||||||||||||| |||||    
T  5204647 gctggttcatgaaccaaacgagtcgaaccatactcaattcaagttcgactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttc 5204548  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    | ||| |||||||||||| |||||||||||||||||||||  ||||||||||| |||||||| |||||    
T  5204547 acgaaccaagttcaacgagtcaattatcgaatcgaatctcaaactattttcgagttggttcgattcat 5204480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 50 - 202
Target Start/End: Original strand, 7995948 - 7996100
Alignment:
Q  50 aaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaa 149  Q
    |||||| |||||||||| ||| |||||||| | |||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||| |||||||||    
T  7995948 aaacgagtcgaaccatacttaattcaagttgagctcatttatttaacgagcttaattttaaacttaagttcgactcattaggtttatgaaccaagttcaa 7996047  T
Q  150 cgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||| |||||    
T  7996048 cgaatcaattatcgaatcgaatctcgaactattttcaagttggttcggttcat 7996100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 35 - 202
Target Start/End: Complemental strand, 40159808 - 40159641
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    ||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||| | |||    
T  40159808 gctggttcatgaaccaaacgagtcgaaccatactaagttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttgattc 40159709  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||| ||||| ||| ||| ||||||||||||||||| ||  ||||||||||| |||||||| |||||    
T  40159708 atgaaccaagtccaatgaaccaattatcgaatcgaatatcaaactattttcgagttggttcggttcat 40159641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 35 - 202
Target Start/End: Original strand, 47983217 - 47983384
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    ||||||||||||||||||||| |||||||||| |||  | |||||||||||||||||||||| || |||  ||| ||||||||||||||||||| |||||    
T  47983217 gctggttcatgaaccaaacgagtcgaaccatacttaacttaagttcaactcatttatttaacgagtttagattttaactcaagttcgactcatttggttc 47983316  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
     |||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||||||| |||||    
T  47983317 gtgaaccaagttcaacaaatcaattatcgaatcgaatctcgaactattttcgagttggttcggttcat 47983384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 37 - 202
Target Start/End: Complemental strand, 29677695 - 29677530
Alignment:
Q  37 tggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcat 136  Q
    ||||||||||| ||||||| |||||| ||| |||||||||||||| |||||||||||||  ||||||||||| ||||||||||||||||||| ||||| |    
T  29677695 tggttcatgaagcaaacgagtcgaactatacttagttcaagttcagctcatttatttaaagagcttaattttcaactcaagttcgactcatttggttcgt 29677596  T
Q  137 gaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||| ||||||||||||| |||||||| |||||| | ||| ||||||||||| |||||||| |||||    
T  29677595 gaaccaagttcaacgaaccaattatcaaatcgagtatcgaactattttcgagttggttcggttcat 29677530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 39 - 202
Target Start/End: Original strand, 7956290 - 7956453
Alignment:
Q  39 gttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatga 138  Q
    ||||||||||||||||| ||||| |||| | ||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||  ||||||||    
T  7956290 gttcatgaaccaaacgagtcgaatcatactaagttcaagttcaactcatttatttaacaagcttaattttcaattcaagttcgactaattttgttcatga 7956389  T
Q  139 atcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    | ||||| ||| ||| |||||||||||| || | ||| ||||||||||| |||||||| |||||    
T  7956390 accaagtccaatgaaccaattatcgaattgagtatcgaactattttcgagttggttcggttcat 7956453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 35 - 202
Target Start/End: Complemental strand, 15257349 - 15257182
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    ||||||| ||||||||||||| ||||| |||| | ||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||    
T  15257349 gctggttgatgaaccaaacgagtcgaatcatactaagttcaaattcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttc 15257250  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||| ||||| ||| ||| ||||||||||||||| | ||  |||||||| || |||||||| |||||    
T  15257249 atgaaccaagtccaatgaaccaattatcgaatcgagtatcaaactatttttgagttggttcggttcat 15257182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 73 - 202
Target Start/End: Original strand, 24575909 - 24576038
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatc 172  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||  ||||| |||||||||| |||||||||||| |||||||||||||| ||||    
T  24575909 tcaagttcgactcatttatttaacaagcttaattttcaactcaagttcgtttcatttggttcatgaaccaagttcaacgagtcaattatcgaatcaaatc 24576008  T
Q  173 tcgcactattttcgaattggttcgtttcat 202  Q
    ||| ||||||||||| |||||||| |||||    
T  24576009 tcgaactattttcgagttggttcggttcat 24576038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 35 - 194
Target Start/End: Original strand, 50447303 - 50447462
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    ||||||||||||||||||||| ||||  || |  |||||||||||||||||||||||||||| | |||||||||||  ||||||||| |||||| |||||    
T  50447303 gctggttcatgaaccaaacgagtcgagtcaaacatagttcaagttcaactcatttatttaacgaacttaattttaagttcaagttcggctcatttggttc 50447402  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggtt 194  Q
    || || |||||| ||||||| |||||||||||||| ||||| ||||||||||| ||||||    
T  50447403 ataaaccaagtttaacgaattaattatcgaatcgagtctcgaactattttcgagttggtt 50447462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 41 - 202
Target Start/End: Complemental strand, 39802939 - 39802778
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||||||||| |||| | |||  ||| ||||||||  |||||||||||||| | ||||||||| ||||||||||||||||||| ||||||||||     
T  39802939 tcatgaaccaaacgaatcgagctatacatagctcaagttcggctcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaac 39802840  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    || ||||||||||| || |  |||| ||| ||||| ||||||||||| |||||||| |||||    
T  39802839 catgttcaacgaattaactgccgaaccgagtctcgaactattttcgagttggttcgattcat 39802778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 44 - 171
Target Start/End: Original strand, 35810689 - 35810816
Alignment:
Q  44 tgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaa 143  Q
    |||||||||||| |||||| | || ||||||||||||  |||| |||||| || | ||||||||| | |||||||||| |||||| |||||||||| |||    
T  35810689 tgaaccaaacgagtcgaactacatatagttcaagttcggctcaattatttgacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaa 35810788  T
Q  144 gttcaacgaatcaattatcgaatcgaat 171  Q
    |||||||||||||||| |||||||||||    
T  35810789 gttcaacgaatcaattgtcgaatcgaat 35810816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 42916286 - 42916156
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||||||||| |||| | |||| | ||||||||||| |||| ||| ||| | | ||||||||| | |||||||||| |||||| ||||||||||     
T  42916286 tcatgaaccaaacgagtcgacctatatatggttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcatgaac 42916187  T
Q  141 caagttcaacgaatcaattatcgaatcgaat 171  Q
    ||||||| |||||||||||||||||||||||    
T  42916186 caagttcgacgaatcaattatcgaatcgaat 42916156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 46265116 - 46264986
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||||||||| |||| | |||| ||||||||||||| |||| ||| ||| | | ||||||||| | |||||||||| ||||||  |||||||||     
T  46265116 tcatgaaccaaacgagtcgacctatatatagttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttagttcatgaac 46265017  T
Q  141 caagttcaacgaatcaattatcgaatcgaat 171  Q
    ||||||| |||||||||||||||||||||||    
T  46265016 caagttcgacgaatcaattatcgaatcgaat 46264986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 46 - 196
Target Start/End: Complemental strand, 48575247 - 48575097
Alignment:
Q  46 aaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagt 145  Q
    |||||||||  |||||| ||| |||  ||||||||||||||||||||| || | |||||||||||| |||||||||| || || |||||||||| |||||    
T  48575247 aaccaaacgggtcgaactatacttaactcaagttcaactcatttatttgacgaacttaattttaaattcaagttcgattcgtttggttcatgaaccaagt 48575148  T
Q  146 tcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcg 196  Q
    ||||||||| ||||| ||||| || ||||  ||||||||||| || |||||    
T  48575147 tcaacgaattaattaccgaattgagtctcatactattttcgagttagttcg 48575097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 73 - 202
Target Start/End: Original strand, 31816568 - 31816697
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatc 172  Q
    ||||||||  ||||||||||| || |||||||||||  ||| |||||| ||||||| |||||||||| |||||||||||||||||||| ||||| || |     
T  31816568 tcaagttcggctcatttatttgacgagcttaattttcgactgaagttcaactcatttggttcatgaaccaagttcaacgaatcaattaccgaattgagtt 31816667  T
Q  173 tcgcactattttcgaattggttcgtttcat 202  Q
    ||| ||||||||||| |||||||| |||||    
T  31816668 tcgaactattttcgagttggttcggttcat 31816697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 110 - 202
Target Start/End: Original strand, 6413276 - 6413368
Alignment:
Q  110 aactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||||||| ||||| |||||||||| || ||||||||||||||||||| |||||||||||| ||||||||||| |||||||| |||||    
T  6413276 aactcaagttcgattcatttggttcatgaaccaggttcaacgaatcaattatcaaatcgaatctcgaactattttcgagttggttcgattcat 6413368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 202
Target Start/End: Complemental strand, 45581178 - 45581019
Alignment:
Q  43 atgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatca 142  Q
    ||||||||||||| ||||||||||| ||| | | ||||| |||||||| ||||  | |||||||||   ||||||||| ||||||| |||||||||| ||    
T  45581178 atgaaccaaacgagtcgaaccatatatagctaatgttcatctcatttagttaatgaacttaattttccgctcaagttcaactcatttggttcatgaacca 45581079  T
Q  143 agttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||||   |||||||||||||| | ||| ||||||||| | |||||||| |||||    
T  45581078 agttcaacgagataattatcgaatcgagtttcgaactattttcaagttggttcggttcat 45581019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 202
Target Start/End: Complemental strand, 24469989 - 24469828
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| |||||| |||| ||| ||||||||| |||||||| ||||| | ||||||||| | ||||||| |  ||| |||||||||||||     
T  24469989 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 24469890  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||||| || || |||||| |||||| ||| |||||  |||| |||||||| |||||    
T  24469889 caagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcat 24469828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 32179826 - 32179987
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| |||||| |||| ||| ||||||||| |||||||| ||||| | ||||||||| | ||||||| |  ||||||||||| |||||     
T  32179826 tcatgaaccgaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcattaggtttatgaac 32179925  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||||| || || |||||| |||||| ||| |||||  |||| |||||||| |||||    
T  32179926 caagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcat 32179987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 202
Target Start/End: Complemental strand, 47603034 - 47602873
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| |||||| |||| ||| ||||||||| |||||||| ||||| | ||||||||| | ||||||| |  ||| |||||||||||||     
T  47603034 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 47602935  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||||| || || |||||| |||||| ||| |||||  |||| |||||||| |||||    
T  47602934 caagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcat 47602873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 15014342 - 15014413
Alignment:
Q  100 cttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaat 171  Q
    ||||||||| |||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||    
T  15014342 cttaattttcaactcaagttcggctcatttggttcatgaatcaagttcgacgaatcaattatcgaatcgaat 15014413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 43 - 202
Target Start/End: Original strand, 20349116 - 20349275
Alignment:
Q  43 atgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatca 142  Q
    ||||||||||||| |||||  |||| |||||||| |||| |||||||| ||||| | ||||||||| | || ||||||| |||||| |||  ||||||||    
T  20349116 atgaaccaaacgagtcgaattatatatagttcaaattcagctcatttaattaacgaacttaattttcatctgaagttcggctcatttggtatatgaatca 20349215  T
Q  143 agttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    |||||||||||| ||||||||| || ||| |   ||||| ||||| |||||||| |||||    
T  20349216 agttcaacgaattaattatcgagtcaaattttaaactatgttcgagttggttcggttcat 20349275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 41 - 167
Target Start/End: Original strand, 7596361 - 7596487
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||| ||||||| |||||| | || ||||||||||||| |||| ||| ||| | | ||||||||| | |||||||||| |||||| ||||||| ||     
T  7596361 tcatgaatcaaacgagtcgaactacatatagttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcataaac 7596460  T
Q  141 caagttcaacgaatcaattatcgaatc 167  Q
    ||||||| |||||||||||||||||||    
T  7596461 caagttcgacgaatcaattatcgaatc 7596487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 37 - 167
Target Start/End: Complemental strand, 27076691 - 27076561
Alignment:
Q  37 tggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcat 136  Q
    ||||||||||||||||||| | ||  || |  ||||||||||||||||| |||||||||| | ||||| ||| | |||||||||| ||||||  ||||||    
T  27076691 tggttcatgaaccaaacgaattgagtcaaacatagttcaagttcaactcgtttatttaacgaacttaactttgagctcaagttcggctcatttagttcat 27076592  T
Q  137 gaatcaagttcaacgaatcaattatcgaatc 167  Q
    | | |||||||||||||| ||||||||||||    
T  27076591 ggaccaagttcaacgaattaattatcgaatc 27076561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 36419069 - 36419230
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| |||||| |||| ||| ||||||||| |||||||| ||||| | |||||||||   ||||||| |  |||||||||||||||||     
T  36419069 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcggctcaagtccagctcattaggttcatgaac 36419168  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||| ||| || || |||||| |||||| ||| |||||  |||| |||||||| |||||    
T  36419169 caagttcgacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcat 36419230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 193
Target Start/End: Complemental strand, 45653601 - 45653451
Alignment:
Q  43 atgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatca 142  Q
    ||||| ||||||| |||||| |||| ||||||| |||||  |||||||  |||| | ||||| ||| | |||||||||| |||||| |||||||||| ||    
T  45653601 atgaatcaaacgagtcgaactatatatagttcatgttcagttcatttagctaacgaacttaacttttagctcaagttcggctcatttggttcatgaacca 45653502  T
Q  143 agttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggt 193  Q
    |||||||||||  |||| ||||||||| | | | ||||||||||| |||||    
T  45653501 agttcaacgaaataattgtcgaatcgagttttgaactattttcgagttggt 45653451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 15306461 - 15306622
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||||| ||| |||||| ||||  || ||||||||  |||||||||||||  | |||||||||   |||||||||  |||||| ||||||||||     
T  15306461 tcatgaaccaatcgagtcgaactatatacagctcaagttcggctcatttatttaatgaacttaattttccgctcaagttcagctcatttggttcatgaac 15306560  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||| |||| |||||||||||||| |  || |||||| || | |||||||| |||||    
T  15306561 caagttcaatgaattaattatcgaatcgagttccgaactattgtcaagttggttcggttcat 15306622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 31869562 - 31869723
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||||| ||| |||||  ||||  || ||||||||  |||||||||||||| | ||||||||| | || ||||||| |||||| ||||||||||     
T  31869562 tcatgaaccaaccgagtcgaattatatacagctcaagttcggctcatttatttaacgaacttaattttcagcttaagttcggctcatttggttcatgaac 31869661  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    |||||||||||| | |||| ||||||| | |  || |||||| ||||||| ||||| |||||    
T  31869662 caagttcaacgatttaattgtcgaatcaagttccgaactattgtcgaattagttcggttcat 31869723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 44 - 171
Target Start/End: Complemental strand, 25125054 - 25124927
Alignment:
Q  44 tgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaa 143  Q
    ||||||||||||   |||| | || ||| ||||||||| |||| ||| || || |  |||||||| | |||||||||| |||||| |||||||||| |||    
T  25125054 tgaaccaaacgagctgaactacatatagctcaagttcagctcaattagttcacgaaattaattttcagctcaagttcggctcatttggttcatgaaccaa 25124955  T
Q  144 gttcaacgaatcaattatcgaatcgaat 171  Q
    ||||||||||||||||||| ||||||||    
T  25124954 gttcaacgaatcaattatcaaatcgaat 25124927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 44 - 171
Target Start/End: Original strand, 42937045 - 42937172
Alignment:
Q  44 tgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaa 143  Q
    |||||||||||| | |||| |||  ||| ||||||||| |||| ||| || || | ||||||||||| |||||||||| |||||| | |||||||| |||    
T  42937045 tgaaccaaacgagttgaactatacatagctcaagttcagctcaattagttgacgaacttaattttaagctcaagttcggctcatttgattcatgaaccaa 42937144  T
Q  144 gttcaacgaatcaattatcgaatcgaat 171  Q
    |||| ||||||||||| | |||||||||    
T  42937145 gttcgacgaatcaattgttgaatcgaat 42937172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 36119040 - 36119200
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||||||||| |||||  |||| ||||||||||||| ||| |||| ||||||| ||| | ||| |||||||||||   ||||| ||||||| ||     
T  36119040 tcatgaaccaaacgaatcgaattatatatagttcaagttcagctcgtttagttaacaaacttca-tttgaactcaagttcagttcatttggttcataaac 36119138  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||| ||||   |||| ||||||||||| ||| ||||||||  | |||||||| |||||    
T  36119139 caagttcgacgagaaaattgtcgaatcgaatttcgaactattttttagttggttcggttcat 36119200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 7841665 - 7841751
Alignment:
Q  115 aagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    |||||||  ||||| |||||||||| |||||||||||||| |||||||||||||| ||||| | ||||||||| |||||||| |||||    
T  7841665 aagttcggttcatttggttcatgaaccaagttcaacgaattaattatcgaatcgagtctcg-aatattttcgagttggttcggttcat 7841751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 57 - 164
Target Start/End: Original strand, 14796572 - 14796679
Alignment:
Q  57 tcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatca 156  Q
    |||||| |||| ||||  |||||||||||||||||||||| | |||||||| ||  |||||||| ||| | | |||||||||| || ||||||||||| |    
T  14796572 tcgaactatatatagtcaaagttcaactcatttatttaacgaacttaatttaaagttcaagttcaacttaattggttcatgaaccacgttcaacgaatta 14796671  T
Q  157 attatcga 164  Q
    ||||||||    
T  14796672 attatcga 14796679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 57 - 164
Target Start/End: Original strand, 14805446 - 14805553
Alignment:
Q  57 tcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatca 156  Q
    |||||| |||| ||||  |||||||||||||||||||||| | |||||||| ||  |||||||| ||| | | |||||||||| || ||||||||||| |    
T  14805446 tcgaactatatatagtcaaagttcaactcatttatttaacgaacttaatttaaagttcaagttcaacttaattggttcatgaaccacgttcaacgaatta 14805545  T
Q  157 attatcga 164  Q
    ||||||||    
T  14805546 attatcga 14805553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 39 - 150
Target Start/End: Complemental strand, 43087640 - 43087529
Alignment:
Q  39 gttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatga 138  Q
    |||| |||||||||||| |||||| |||| ||  |||||||||||||||||| ||||| | |||||| || |  ||||||||| ||| || |||||||||    
T  43087640 gttcgtgaaccaaacgaatcgaactatatataactcaagttcaactcatttaattaacgaacttaatctttagttcaagttcggctcgtttggttcatga 43087541  T
Q  139 atcaagttcaac 150  Q
    | ||||||||||    
T  43087540 accaagttcaac 43087529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 202
Target Start/End: Complemental strand, 12224676 - 12224586
Alignment:
Q  112 ctcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    |||||||||| |||||| |||||||||| |||||||||||| | |||| |||||||||||  || |||||| |||| |||||||| |||||    
T  12224676 ctcaagttcggctcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgaattccgaactattgtcgagttggttcggttcat 12224586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 153
Target Start/End: Original strand, 19508494 - 19508608
Alignment:
Q  39 gttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatga 138  Q
    |||| |||||||||| | |||||| |||| ||  ||||| |||||||||||| ||||| | |||||| || | |||||||||| ||| || |||||||||    
T  19508494 gttcgtgaaccaaacaagtcgaactatatataactcaaggtcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatga 19508593  T
Q  139 atcaagttcaacgaa 153  Q
    | |||||||||||||    
T  19508594 accaagttcaacgaa 19508608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 37441358 - 37441248
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    |||| |||| ||||| |||||| |||| ||| ||||||||| |||||||| ||||| | ||||||||| | ||||||| |  ||| |||||||||||||     
T  37441358 tcattaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 37441259  T
Q  141 caagttcaacg 151  Q
    |||||||||||    
T  37441258 caagttcaacg 37441248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 73 - 202
Target Start/End: Complemental strand, 23915737 - 23915608
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatc 172  Q
    |||||||||||||||||||||||  | ||||||||| | || ||||||  |||||| |||||||||| ||||||||||||   |||| | ||||||| |     
T  23915737 tcaagttcaactcatttatttaatgaacttaattttcagctaaagttcagctcatttggttcatgaaccaagttcaacgagataattgttgaatcgagtt 23915638  T
Q  173 tcgcactattttcgaattggttcgtttcat 202  Q
    ||| ||| || |||| |||||||| |||||    
T  23915637 tcgaacttttgtcgagttggttcgattcat 23915608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 75 - 202
Target Start/End: Original strand, 7702837 - 7702964
Alignment:
Q  75 aagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctc 174  Q
    ||||||| |||||||| ||||| | ||||||||| | ||||||| |  ||| |||| |||||||| ||||||||||| || || |||||| |||||| ||    
T  7702837 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttagcttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 7702936  T
Q  175 gcactattttcgaattggttcgtttcat 202  Q
    | |||||  |||| |||||||| |||||    
T  7702937 gaactataatcgagttggttcggttcat 7702964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 44 - 171
Target Start/End: Original strand, 23916781 - 23916908
Alignment:
Q  44 tgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaa 143  Q
    |||||||||||| |||||| | || | | ||||||||| |||| ||| || || | ||||||||| | |||||||| | |||||| |||| ||||| |||    
T  23916781 tgaaccaaacgagtcgaactacatattgctcaagttcagctcaattagttgacgaacttaattttcagctcaagttaggctcatttggttaatgaaccaa 23916880  T
Q  144 gttcaacgaatcaattatcgaatcgaat 171  Q
    |||  | |||||||||||||||||||||    
T  23916881 gtttgatgaatcaattatcgaatcgaat 23916908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 202
Target Start/End: Original strand, 44596524 - 44596646
Alignment:
Q  80 caactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctcgcact 179  Q
    ||||||||||||||||| | ||||||||| |  ||||||||  |||||| |||||||||| ||| |||||||| | |||| ||||||||| |  |  |||    
T  44596524 caactcatttatttaacgaacttaattttcagttcaagttcagctcatttggttcatgaaccaaattcaacgagttaattgtcgaatcgagttccaaact 44596623  T
Q  180 attttcgaattggttcgtttcat 202  Q
    ||| |||| |||||||| |||||    
T  44596624 attgtcgagttggttcggttcat 44596646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 146
Target Start/End: Complemental strand, 13645354 - 13645247
Alignment:
Q  39 gttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatga 138  Q
    |||||||||||||| || |||||| |||| ||  |||| ||||||||||||| ||||| | |||||| || | |||||||||| ||| || | |||||||    
T  13645354 gttcatgaaccaaatgagtcgaactatatataactcaaattcaactcatttacttaacgaacttaatctttagctcaagttcggctcgtttgattcatga 13645255  T
Q  139 atcaagtt 146  Q
    | ||||||    
T  13645254 accaagtt 13645247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 15662976 - 15663047
Alignment:
Q  100 cttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaat 171  Q
    ||||||||| | |||||||||| |||||| ||| |||||| ||||||| ||||||||||||| |||| ||||    
T  15662976 cttaattttcagctcaagttcggctcatttggtacatgaaccaagttcgacgaatcaattattgaattgaat 15663047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 202
Target Start/End: Complemental strand, 21680830 - 21680667
Alignment:
Q  39 gttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatga 138  Q
    |||||||||| |||| | | |||| |||| ||||| | |||||  || ||||  |||| | ||||||||| | |||||||||| ||||||   ||||| |    
T  21680830 gttcatgaactaaacaagttgaactatatgtagtttatgttcagttcgtttagctaacgaacttaatttttagctcaagttcggctcatttcattcataa 21680731  T
Q  139 atcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    | ||||||||||||   |||||||||||||| | ||| |||||||||||  ||||||| |||||    
T  21680730 accaagttcaacgagataattatcgaatcgagtttcgaactattttcgagctggttcggttcat 21680667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 139
Target Start/End: Original strand, 40002865 - 40002960
Alignment:
Q  44 tgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaa 139  Q
    |||| ||||||| |||||| | || ||| |||||||||||||| ||| || || | ||||||||| |||||||||||| |||||| | ||||||||    
T  40002865 tgaatcaaacgagtcgaactacatatagctcaagttcaactcaattagttgacgaacttaattttcaactcaagttcggctcatttgattcatgaa 40002960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 8828400 - 8828303
Alignment:
Q  39 gttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcat 136  Q
    ||||||||| ||||||| |||||  || | ||| |||||||||||| ||||| ||||||  ||||||||| | ||||||||| | ||||| |||||||    
T  8828400 gttcatgaatcaaacgagtcgaattatgtctagctcaagttcaacttatttagttaacagacttaattttcagctcaagttcaattcatttggttcat 8828303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 143
Target Start/End: Complemental strand, 33233706 - 33233620
Alignment:
Q  57 tcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaa 143  Q
    ||||| ||||| ||| ||||||| ||||| |||| ||||| | ||||||||| | ||||||||| ||| ||| | ||||||||||||    
T  33233706 tcgaaacatatatagctcaagttaaactcgtttagttaacgaccttaattttcagctcaagttcaacttatttgattcatgaatcaa 33233620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 15786879 - 15786923
Alignment:
Q  64 atatttagttcaagttcaactcatttatttaacaagcttaatttt 108  Q
    |||||||| ||||||| ||| |||||||||||| |||||||||||    
T  15786879 atatttagctcaagttgaacgcatttatttaacgagcttaatttt 15786923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 169
Target Start/End: Complemental strand, 51432343 - 51432247
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcga 169  Q
    ||||||||| || ||||||||||| |  |||||||| | || || ||| ||||||| |||||||||| ||||| |||||| | |||| | |||||||    
T  51432343 tcaagttcagctaatttatttaacgattttaattttcagcttaatttcaactcatttggttcatgaaccaagtacaacgagttaattgttgaatcga 51432247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 119; Significance: 6e-61; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 36 - 202
Target Start/End: Original strand, 1803461 - 1803622
Alignment:
Q  36 ctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttca 135  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1803461 ctggtttatgaaccaaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttca 1803560  T
Q  136 tgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||||| ||||||||||||     ||||||||||||||| ||||||| |||||||| |||||    
T  1803561 tgaatcaagtttaacgaatcaatt-----atcgaatctcgcactcttttcgagttggttcggttcat 1803622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 24008085 - 24007921
Alignment:
Q  31 tcaggctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattag 130  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||  |||| ||||    
T  24008085 tcaggctggttcatgaaccaaacgagtcgaaccatatttagctcaagttcaactcatttatttaacgaacttaattttaaactcaagtttaactcgttag 24007986  T
Q  131 gttcatgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttc 195  Q
    ||||||||| |||||||||||||||||| ||| |||||||||||| ||||||||||| |||||||    
T  24007985 gttcatgaaccaagttcaacgaatcaatcatcaaatcgaatctcgaactattttcgagttggttc 24007921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 35 - 202
Target Start/End: Complemental strand, 12673206 - 12673039
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    ||||||||||||||||||||| |||||||||| | |  |||||||| ||||||||||||||  ||||||||||| ||||||||||||||||||| |||||    
T  12673206 gctggttcatgaaccaaacgagtcgaaccatactcaactcaagttcgactcatttatttaatgagcttaattttcaactcaagttcgactcatttggttc 12673107  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||| |||||||||||| |||||||||||||||||||||| ||||||||||| |||||||| |||||    
T  12673106 atgaaccaagttcaacgagtcaattatcgaatcgaatctcgaactattttcgagttggttcggttcat 12673039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 35 - 202
Target Start/End: Original strand, 40797792 - 40797959
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    ||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||    
T  40797792 gctggttcatgaaccaaacgagtcgaaccatactaagttcaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttc 40797891  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||| ||||||||| ||| ||||||||||||| | | ||| |||||||| || |||||||| |||||    
T  40797892 atgaaccaagttcaatgaaccaattatcgaatcaagtatcgaactatttttgagttggttcggttcat 40797959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 35 - 202
Target Start/End: Complemental strand, 46944722 - 46944555
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    ||||||||||||||||||||| |||||||||| | |  |||||||| ||| ||||||||||| ||||||| ||| ||||||||||||||||||| |||||    
T  46944722 gctggttcatgaaccaaacgagtcgaaccatactcaactcaagttcgacttatttatttaacgagcttaaatttcaactcaagttcgactcatttggttc 46944623  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||| ||||||||||||  ||||||||||||||||||||| |||||||| || |||||||| |||||    
T  46944622 atgaaccaagttcaacgagccaattatcgaatcgaatctcgaactatttttgagttggttcggttcat 46944555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 35 - 202
Target Start/End: Original strand, 51995040 - 51995207
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    ||||||||||||||||||||| ||||  || |  ||||||||||||||||| |||||||||||| ||||||||| | |||||||||| |||||| |||||    
T  51995040 gctggttcatgaaccaaacgagtcgagtcaaacatagttcaagttcaactcgtttatttaacaaacttaattttgagctcaagttcggctcatttggttc 51995139  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||| |||||||||||||| |||||||||||||| ||||| ||||||||||| |||||||| |||||    
T  51995140 atgaaccaagttcaacgaattaattatcgaatcgagtctcgaactattttcgagttggttcggttcat 51995207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 35 - 202
Target Start/End: Original strand, 80459 - 80626
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    ||||||||||||||||||||| |||||  |||  ||||||||||||  ||||||||||| || ||||||||||| ||||||||||||||||||| |||||    
T  80459 gctggttcatgaaccaaacgagtcgaattatacgtagttcaagttcggctcatttatttgacgagcttaattttcaactcaagttcgactcatttggttc 80558  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||| ||||||||||||| |||||| |||||| ||| ||| ||||||||||| |||| ||| |||||    
T  80559 atgaaccaagttcaacgaaacaattaccgaatcaaatttcgaactattttcgagttggatcggttcat 80626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 39 - 202
Target Start/End: Complemental strand, 9222304 - 9222143
Alignment:
Q  39 gttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatga 138  Q
    |||||||||||| |||| |||||||||| | ||||||||||||| ||||||||||||| ||||||||||  ||||||||||||||||||| |||   |||    
T  9222304 gttcatgaaccagacgagtcgaaccatactaagttcaagttcaattcatttatttaacgagcttaatttacaactcaagttcgactcatttggt--gtga 9222207  T
Q  139 atcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    | ||||||||||||| ||||| ||||||||| | ||| ||||||||||| |||||||| |||||    
T  9222206 accaagttcaacgaaccaattgtcgaatcgagtatcgaactattttcgagttggttcggttcat 9222143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 35 - 162
Target Start/End: Original strand, 25134536 - 25134663
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    ||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||| |||||    
T  25134536 gctggttcatgaaccaaacgagtcgaaccatactaagttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttc 25134635  T
Q  135 atgaatcaagttcaacgaatcaattatc 162  Q
    ||||| ||||| |||  || ||||||||    
T  25134636 atgaaccaagtccaataaaccaattatc 25134663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 35 - 195
Target Start/End: Complemental strand, 55892163 - 55892003
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    ||||||||||||||||||||| | |||| ||| || | ||||||||||||||||| ||| || | ||||||||||||| || ||||||||| || |||||    
T  55892163 gctggttcatgaaccaaacgaattgaactatacttggctcaagttcaactcatttgtttgacgaacttaattttaaacccaggttcgactcgtttggttc 55892064  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttc 195  Q
    ||||| |||||||||||||| ||||| |||||||| ||||| |||||||| || |||||||    
T  55892063 atgaaccaagttcaacgaattaattaccgaatcgagtctcgaactatttttgagttggttc 55892003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 69 - 196
Target Start/End: Original strand, 13455697 - 13455824
Alignment:
Q  69 tagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcg 168  Q
    ||||||||||||||||| |||||||||| | ||||||||| | |||||||| |||||||| ||||||| ||||||||||||||||| |||||||||||||    
T  13455697 tagttcaagttcaactcgtttatttaacgaacttaattttgagctcaagttggactcatttggttcataaatcaagttcaacgaattaattatcgaatcg 13455796  T
Q  169 aatctcgcactattttcgaattggttcg 196  Q
    ||||||  | ||||||| | ||||||||    
T  13455797 aatctcaaattattttcaagttggttcg 13455824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 63 - 194
Target Start/End: Complemental strand, 34980654 - 34980523
Alignment:
Q  63 catatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatc 162  Q
    ||||||||| |||| || |||||||||||||| | || |||||||| ||||||||||||| ||||| | |||||||||||||||||| ||||||||||||    
T  34980654 catatttagctcaaatttaactcatttatttagcgagtttaattttcaactcaagttcgattcatttgattcatgaatcaagttcaatgaatcaattatc 34980555  T
Q  163 gaatcgaatctcgcactattttcgaattggtt 194  Q
    ||||||| ||||  ||||||||||| ||||||    
T  34980554 gaatcgagtctcaaactattttcgagttggtt 34980523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 52 - 195
Target Start/End: Complemental strand, 51408110 - 51407967
Alignment:
Q  52 acgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacg 151  Q
    |||| |||||| ||| || ||||||||||||||||||| ||| || | ||||||||||||| || |||||||||||| |||||||||| |||||| ||||    
T  51408110 acgagtcgaactatacttggttcaagttcaactcatttgtttgacgaacttaattttaaacccaggttcgactcatttggttcatgaaccaagttgaacg 51408011  T
Q  152 aatcaattatcgaatcgaatctcgcactattttcgaattggttc 195  Q
    ||| ||||| |||||||| ||||| ||||||||||| |||||||    
T  51408010 aattaattaccgaatcgagtctcgaactattttcgagttggttc 51407967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 39 - 155
Target Start/End: Original strand, 44378216 - 44378332
Alignment:
Q  39 gttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatga 138  Q
    |||||||||||| |||| |||||  ||| |||| |||||||||||||||||||||||| ||||||||||| ||| ||| ||| ||||||| |||||||||    
T  44378216 gttcatgaaccagacgagtcgaattatacttagctcaagttcaactcatttatttaacgagcttaattttcaacccaaattcaactcatttggttcatga 44378315  T
Q  139 atcaagttcaacgaatc 155  Q
    | |||||||||||||||    
T  44378316 accaagttcaacgaatc 44378332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 195
Target Start/End: Complemental strand, 28265848 - 28265691
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    ||||| ||||||||||||||| |||||| | | || | ||||||||||||||||| ||| || | ||||||||||||||||  |||   || || |||||    
T  28265848 gctggctcatgaaccaaacgagtcgaactacacttggctcaagttcaactcatttgtttgacgaacttaattttaaactcagattc---tcgtttggttc 28265752  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttc 195  Q
    ||||| |||||||||||||| ||||| |||||||| ||||| ||||||||||| |||||||    
T  28265751 atgaaccaagttcaacgaattaattaccgaatcgagtctcgaactattttcgagttggttc 28265691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 44 - 189
Target Start/End: Complemental strand, 19455327 - 19455182
Alignment:
Q  44 tgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaa 143  Q
    |||||||||| | ||||||  ||| ||| ||||||||||||||||||  |||||| ||||||||| |||||||||||  |||||| | |||||||| |||    
T  19455327 tgaaccaaacaagtcgaactgtatatagctcaagttcaactcatttagataacaaacttaattttcaactcaagttcagctcatttgattcatgaaccaa 19455228  T
Q  144 gttcaacgaatcaattatcgaatcgaatctcgcactattttcgaat 189  Q
    ||||||||||| |||| || |||||| | ||| |||||||||||||    
T  19455227 gttcaacgaattaattgtcaaatcgagtttcgaactattttcgaat 19455182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 73 - 202
Target Start/End: Complemental strand, 49405775 - 49405646
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatc 172  Q
    ||||||||  ||||||||||| || |||||||||||  | |||||||||||||||| ||||||| || |||||||||||||||||||| |||||||| |     
T  49405775 tcaagttcggctcatttatttgacgagcttaattttcgattcaagttcgactcatttggttcataaaccaagttcaacgaatcaattaccgaatcgagtt 49405676  T
Q  173 tcgcactattttcgaattggttcgtttcat 202  Q
    ||| ||||||||||  |||||||| |||||    
T  49405675 tcgaactattttcgggttggttcggttcat 49405646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 44 - 171
Target Start/End: Complemental strand, 36156463 - 36156336
Alignment:
Q  44 tgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaa 143  Q
    |||||||||||| |||||| | || ||||||||||||| |||| ||| || || | ||||||||| | |||||||||| |||||| |||||| ||| |||    
T  36156463 tgaaccaaacgagtcgaactacatatagttcaagttcagctcaattagttgacgaacttaattttcagctcaagttcggctcatttggttcaagaaccaa 36156364  T
Q  144 gttcaacgaatcaattatcgaatcgaat 171  Q
    |||||||||||||||| |||||||||||    
T  36156363 gttcaacgaatcaattgtcgaatcgaat 36156336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 44 - 202
Target Start/End: Complemental strand, 48802645 - 48802486
Alignment:
Q  44 tgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaa 143  Q
    |||||||||||| |||||| ||   ||| ||||||||  ||||||||||| || |||||||||||  |||||||||||||||||| ||||||||||||||    
T  48802645 tgaaccaaacgagtcgaactattcatagctcaagttcggctcatttatttgacgagcttaattttcgactcaagttcgactcatttggttcatgaatcaa 48802546  T
Q  144 gttc-aacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    |||| ||  ||||||| | | |||||| | ||| ||||||||||| |||||||| |||||    
T  48802545 gttcaaaaaaatcaataaccaaatcgagtttcgaactattttcgagttggttcggttcat 48802486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 41 - 175
Target Start/End: Complemental strand, 15697255 - 15697121
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||||||||| ||| || || ||||||||| ||||| |||||| | ||||| | ||||||||| | |||||||||  || ||| |||||||||||    
T  15697255 tcatgaaccaaacgagtcggactatgtttagttcatgttcagctcattaagttaacgaacttaatttttagctcaagttcagcttatttggttcatgaat 15697156  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcg 175  Q
    ||||||||||||||||||| |||| |||| |||||    
T  15697155 caagttcaacgaatcaattgtcgagtcgagtctcg 15697121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 139
Target Start/End: Complemental strand, 50710946 - 50710844
Alignment:
Q  37 tggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcat 136  Q
    |||||||| |||||||||| |||||||||| | |||| |||||||||| ||||||||||| ||||||||||| ||||||| ||||||||||| | |||||    
T  50710946 tggttcataaaccaaacgagtcgaaccatactaagtttaagttcaacttatttatttaacgagcttaattttcaactcaatttcgactcatttgattcat 50710847  T
Q  137 gaa 139  Q
    |||    
T  50710846 gaa 50710844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 164
Target Start/End: Complemental strand, 25102775 - 25102646
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    |||||||||| |||||||||| | |||||||| |||||| || |||||||||||||||||||||| ||||| || ||||||| |||| |||||| |||||    
T  25102775 gctggttcataaaccaaacgagttgaaccatacttagtttaaattcaactcatttatttaacaagtttaatgttcaactcaatttcggctcatttggttc 25102676  T
Q  135 atgaatcaagttcaacgaatcaattatcga 164  Q
    ||||| |||   |||| ||||| |||||||    
T  25102675 atgaaccaaacgcaacaaatcatttatcga 25102646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 174
Target Start/End: Complemental strand, 43798395 - 43798262
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||||||||| |||||| |||  ||| |||||||||||||||||||||||  | ||| |||||  ||||||| |||||||||| |||||| |||     
T  43798395 tcatgaaccaaacgagtcgaactatacatagctcaagttcaactcatttatttaatgatcttcattttttactcaagctcgactcatttggttcaagaac 43798296  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctc 174  Q
    | |||||||||| | |||||||||||||| ||||    
T  43798295 cgagttcaacgagttaattatcgaatcgagtctc 43798262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 35 - 187
Target Start/End: Original strand, 39736645 - 39736797
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    |||||||||||||  |||  | ||||| ||||  ||| |||| || ||||| |||||||||||| ||||||||| || |||||||||||| ||| ||| |    
T  39736645 gctggttcatgaattaaataagtcgaatcatacatagctcaaatttaactcgtttatttaacaaacttaatttttaattcaagttcgacttatttggtcc 39736744  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcga 187  Q
     |||| ||| ||||||||||||||||||||||||| ||||  |||||||||||    
T  39736745 gtgaaccaaattcaacgaatcaattatcgaatcgagtctcaaactattttcga 39736797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 9469745 - 9469906
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| ||||||||| | ||||||||||||| |||||||| | ||| | ||||||||| | |||||||| | |||||| ||||||||||     
T  9469745 tcatgaacctaacgaatcgaaccatctatagttcaagttcagctcatttaatcaacgaacttaattttcagctcaagtttggctcatttggttcatgaac 9469844  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    |||||||||   | ||||| |||| ||||||  || ||||| ||||| |||||||| |||||    
T  9469845 caagttcaatagaccaattgtcgagtcgaattacgaactatattcgagttggttcggttcat 9469906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 202
Target Start/End: Complemental strand, 11055398 - 11055237
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||||| ||| |||||| ||||  || ||||||||  |||||||||||||| | |||||||||   |||||||||  |||||| ||||||||||     
T  11055398 tcatgaaccaatcgagtcgaactatatacagctcaagttcggctcatttatttaacgaacttaattttccgctcaagttcagctcatttggttcatgaac 11055299  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||| || | |||||||||||||| |  || |||||| |||| |||||||| |||||    
T  11055298 caagttcaatgagttaattatcgaatcgagttccgaactattgtcgagttggttcggttcat 11055237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 19852946 - 19853107
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| |||||| |||| ||| ||||||||| |||||||| ||||| | ||||||||| | ||||||| |  ||| |||||||||||||     
T  19852946 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccatctcgttaggttcatgaac 19853045  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||||| || || |||||| |||||| ||  |||||  |||| |||||||| |||||    
T  19853046 caagttcaacggattaaatatcgagtcgaatgtcaaactataatcgagttggttcgattcat 19853107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 21441549 - 21441710
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| |||||| |||| ||| ||||||||| |||||||| ||||| | ||||||||| | ||||||| |  ||| |||||||||||||     
T  21441549 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 21441648  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||||| || |  |||||| |||||| ||| |||||  |||| |||||||| |||||    
T  21441649 caagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcat 21441710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 50605976 - 50606137
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    |||| |||| ||||| |||||| |||| ||| ||||||||| |||||||| ||||| | ||||||||| | ||||||| |  ||| |||||||||||||     
T  50605976 tcataaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 50606075  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||||| || |  |||||| |||||| ||| |||||  ||||||||||||| |||||    
T  50606076 caagttcaacggattagatatcgagtcgaatgtcgaactataatcgaattggttcggttcat 50606137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 53369840 - 53370001
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| |||||| |||| ||| ||||||||| |||||||| ||||| | ||||||||| | ||||||| |  ||| |||||||||||||     
T  53369840 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 53369939  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||||| || || |||||| | |||| ||| |||||  |||| |||||||| |||||    
T  53369940 caagttcaacggattaaatatcgagttgaatgtcgaactataatcgagttggttcggttcat 53370001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 202
Target Start/End: Original strand, 22184473 - 22184632
Alignment:
Q  43 atgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatca 142  Q
    |||||||||  || |||||| ||||  |||||||||||| ||||||| |||||| | ||||||||| | |||||||||  ||| || |||||||||| ||    
T  22184473 atgaaccaactgagtcgaactatataaagttcaagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaacca 22184572  T
Q  143 agttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    |||||||||| | |||| ||||||||| || |  |||||| |||| |||||||| |||||    
T  22184573 agttcaacgagttaattgtcgaatcgagtcccaaactattgtcgagttggttcggttcat 22184632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 41 - 195
Target Start/End: Original strand, 36543749 - 36543903
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||| | ||||||||| | ||||||||||||| |||||||| ||||| | ||||||||| | |||||||| | || ||| ||||||||||     
T  36543749 tcatgaacctaacaaatcgaaccatctatagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtttggcttatttggttcatgaac 36543848  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttc 195  Q
    ||||||||| | | ||||| |||| ||||||  || ||||| ||||| |||||||    
T  36543849 caagttcaatggaccaattgtcgagtcgaattacgaactatattcgagttggttc 36543903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 45674803 - 45674964
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| |||||| |||| ||| |||||||||||||||||| ||||| |  |||||||| | ||||||| |  ||| |||||||||||||     
T  45674803 tcatgaacctaacgagtcgaactatatgtagctcaagttcaactcatttaattaacgaatttaattttcagctcaagtccagctcgttaggttcatgaac 45674902  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||| ||| || |  |||||| |||||| ||| |||||  |||| |||||||| |||||    
T  45674903 caagttcgacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcat 45674964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 48977544 - 48977705
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| |||||| |||| ||| ||||||||| |||||||| ||||| |  |||||||| | |||| || |  |||||||||||||||||     
T  48977544 tcatgaaccgaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaatttaattttcagctcatgtccagctcattaggttcatgaac 48977643  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
     ||||||||||||| || |||||| |||||| ||| | |||  |||| |||||||| |||||    
T  48977644 gaagttcaacgaattaaatatcgagtcgaatgtcgaattataatcgagttggttcggttcat 48977705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 7505529 - 7505609
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaa 153  Q
    |||||||||||||||||| ||||| |  |||||||| | |||||||||| |||||| ||||||||||||||||||||||||    
T  7505529 tcaagttcaactcatttagttaacgaatttaatttttagctcaagttcggctcatttggttcatgaatcaagttcaacgaa 7505609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 41 - 169
Target Start/End: Original strand, 22721296 - 22721423
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||||||||| |||||| |||| ||  |||||||||||||||||||||||| | ||||||||| | || ||||| | ||| || ||||||||||     
T  22721296 tcatgaaccaaacgagtcgaactatatataactcaagttcaactcatttatttaacgaacttaatttt-agcttaagtttgcctcgtttggttcatgaac 22721394  T
Q  141 caagttcaacgaatcaattatcgaatcga 169  Q
    ||||||||| |||  ||||| ||||||||    
T  22721395 caagttcaatgaactaattaccgaatcga 22721423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 73 - 171
Target Start/End: Original strand, 24550077 - 24550176
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcat-gaatcaagttcaacgaatcaattatcgaatcgaat 171  Q
    |||||||||||||||||| ||||||| ||||||||| | ||||||||| ||||| | |||| ||  ||||||||||||||||||||||| ||| ||||||    
T  24550077 tcaagttcaactcatttagttaacaaacttaatttttagctcaagttcaactcagttggtttataaaatcaagttcaacgaatcaattaccgagtcgaat 24550176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 44 - 171
Target Start/End: Complemental strand, 48339268 - 48339141
Alignment:
Q  44 tgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaa 143  Q
    |||||||||||| |||||| | || ||| | ||||||| |||| ||| || || | ||||||||| | ||||||||||||||||| | |||||||| |||    
T  48339268 tgaaccaaacgagtcgaactacatatagcttaagttcagctcaattagttgacgaacttaattttcagctcaagttcgactcatttgattcatgaaccaa 48339169  T
Q  144 gttcaacgaatcaattatcgaatcgaat 171  Q
    ||||||| ||||| || |||||||||||    
T  48339168 gttcaacaaatcagttgtcgaatcgaat 48339141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 43 - 159
Target Start/End: Original strand, 56224115 - 56224231
Alignment:
Q  43 atgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatca 142  Q
    ||||||||||| | |||||  |||| |||||||||||||||| ||||| ||||| |  |||||||| | |||||||||| |||||| |||| || || ||    
T  56224115 atgaaccaaacaaatcgaattatatatagttcaagttcaacttatttaattaacgaatttaattttcagctcaagttcggctcatttggtttattaacca 56224214  T
Q  143 agttcaacgaatcaatt 159  Q
    |||||||||||| ||||    
T  56224215 agttcaacgaattaatt 56224231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 59 - 202
Target Start/End: Complemental strand, 12789706 - 12789563
Alignment:
Q  59 gaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaat 158  Q
    |||| |||| ||| ||||||||| |||||||| ||||| | ||||||||| | |||||||||  ||| |||||||||| || ||||||||||| || |      
T  12789706 gaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagttcagctcgttaggttcataaaccaagttcaacggattaga 12789607  T
Q  159 tatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    |||||| |||||| ||| |||||  |||| |||||||| |||||    
T  12789606 tatcgagtcgaatgtcgaactataatcgagttggttcggttcat 12789563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 41 - 196
Target Start/End: Complemental strand, 44791415 - 44791260
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| |||||| |||| ||| |||| |||| |||||||| ||||| | ||||||||| |  |||||| |  ||| |||||||||||||     
T  44791415 tcatgaacctaacgagtcgaactatatgtagctcaaattcagctcatttaattaacgaacttaattttcagttcaagtgcagctcgttaggttcatgaac 44791316  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcg 196  Q
    ||||||||||| || |  |||||| |||||| ||| |||||  |||| ||||||||    
T  44791315 caagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcg 44791260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 41 - 164
Target Start/End: Original strand, 49820950 - 49821073
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| |||||| |||| ||| ||||||||| |||||||| ||||| | ||||||||| | || |||| |  ||| |||||||||||||     
T  49820950 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagcttaagtccagctcgttaggttcatgaac 49821049  T
Q  141 caagttcaacgaatcaattatcga 164  Q
    ||||||||||| || || ||||||    
T  49821050 caagttcaacggattaaatatcga 49821073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 75 - 202
Target Start/End: Complemental strand, 50147056 - 50146929
Alignment:
Q  75 aagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctc 174  Q
    ||||||| |||| ||| || || | ||||||||| | ||||||| ||  ||||| |||||||||| ||||||||||||||||||| |||||||||||  |    
T  50147056 aagttcagctcaattagttcacgaacttaattttcagctcaagtccggttcatttggttcatgaaccaagttcaacgaatcaattgtcgaatcgaattac 50146957  T
Q  175 gcactattttcgaattggttcgtttcat 202  Q
    | ||| |  ||||||||||||| |||||    
T  50146956 gaactttaatcgaattggttcggttcat 50146929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 167
Target Start/End: Complemental strand, 6866243 - 6866149
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatc 167  Q
    ||||||||| |||| ||| || || | ||||||||| | |||||||||| |||||| |||||||||| ||||||  |||||||||||||||||||    
T  6866243 tcaagttcagctcaattagttgacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagtttgacgaatcaattatcgaatc 6866149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 202
Target Start/End: Original strand, 26632935 - 26633065
Alignment:
Q  72 ttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaat 171  Q
    |||||||||  |||||||||||||| | ||||||||| | |||||||||  |||||| |||| ||||  |||||||||||| | |||| ||||||||| |    
T  26632935 ttcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatttggttaatgagccaagttcaacgagttaattgtcgaatcgagt 26633034  T
Q  172 ctcgcactattttcgaattggttcgtttcat 202  Q
      || |||||| |||| |||||||| |||||    
T  26633035 tacgaactattatcgagttggttcggttcat 26633065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 153
Target Start/End: Original strand, 52706183 - 52706297
Alignment:
Q  39 gttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatga 138  Q
    |||| |||| ||||||| |||||| |||| ||  |||||||||||||||||| ||||| | |||||| || | |||||||||| ||| || |||||||||    
T  52706183 gttcgtgaatcaaacgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatga 52706282  T
Q  139 atcaagttcaacgaa 153  Q
    | |||||| ||||||    
T  52706283 accaagtttaacgaa 52706297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 27891355 - 27891515
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||||| ||| |||||| ||||  | ||||| |||| ||||||||||||||||  || ||||| | |||||||||  ||||||  |||||||||     
T  27891355 tcatgaaccaaccgagtcgaactatataaaattcaaattcagctcatttatttaacaaatttgattttcagctcaagttcagctcatt-tgttcatgaac 27891453  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    |||||||||||| | |||| ||||||||| |  || |||||| |||| ||| |||| |||||    
T  27891454 caagttcaacgagttaattgtcgaatcgagttccgaactattgtcgagttgattcgattcat 27891515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 169
Target Start/End: Complemental strand, 43812226 - 43812101
Alignment:
Q  44 tgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaa 143  Q
    ||||| |||||| |||||| | || ||||||||||||| |||| ||| || || | ||||||||| |  | ||||||| | |||| |||||||||| |||    
T  43812226 tgaactaaacgagtcgaactacatctagttcaagttcagctcaattagtttacgaacttaattttcagtttaagttcggcccatttggttcatgaaccaa 43812127  T
Q  144 gttcaacgaatcaattatcgaatcga 169  Q
    |||| ||||||||||| |||||||||    
T  43812126 gttcgacgaatcaattgtcgaatcga 43812101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 52813569 - 52813730
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||||| ||| |||||| ||||  || ||||||||| ||||||| |||||| | ||||||||| | || ||||||  ||| || ||||||||||     
T  52813569 tcatgaaccaaccgaatcgaactatataaagctcaagttcagctcatttgtttaacgaacttaattttcagcttaagttcagctcgtttggttcatgaac 52813668  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    |||||||||||| | |||| || ||| || || |  |||||| |||| |||||||| |||||    
T  52813669 caagttcaacgagttaattgtcaaatagagtcccaaactattgtcgagttggttcggttcat 52813730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 52733838 - 52733747
Alignment:
Q  75 aagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatc 167  Q
    |||||||||| ||||||||||| | ||||||||| | ||||| ||| ||||||| ||||||||||| || |||||||| | ||||||||||||    
T  52733838 aagttcaacttatttatttaacgaacttaattttcagctcaa-ttcaactcatttggttcatgaattaaattcaacgagttaattatcgaatc 52733747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 73 - 184
Target Start/End: Complemental strand, 9906496 - 9906385
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatc 172  Q
    |||||||||||| |||||| |||  || |||||||| ||||||||||||| |||||    |||||||||||||||||||||  |||||  ||||| ||||    
T  9906496 tcaagttcaacttatttatataatgagtttaattttcaactcaagttcgaatcatttaagtcatgaatcaagttcaacgaactaattactgaatcaaatc 9906397  T
Q  173 tcgcactatttt 184  Q
    ||  ||||||||    
T  9906396 tcaaactatttt 9906385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 9874306 - 9874219
Alignment:
Q  115 aagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||| |||||| |||||||| | ||| |||||||||| |||||  ||||||||||| | |||||||| || |||||||| |||||    
T  9874306 aagttcggctcatttggttcatgtaccaatttcaacgaattaattactgaatcgaatcttgaactatttttgagttggttcggttcat 9874219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 196
Target Start/End: Complemental strand, 48151266 - 48151143
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatc 172  Q
    |||||||| ||| ||||||||||| | ||||||||| | |||||||||  |||||| ||||  |||| |||||||||| |   |||| ||||||||| |     
T  48151266 tcaagttcgacttatttatttaacgaacttaattttcagctcaagttcagctcatttggtttgtgaaccaagttcaacaagataattgtcgaatcgagtt 48151167  T
Q  173 tcgcactattttcgaattggttcg 196  Q
    ||| |||||| |||| ||||||||    
T  48151166 tcgaactattgtcgagttggttcg 48151143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 202
Target Start/End: Complemental strand, 4274657 - 4274567
Alignment:
Q  112 ctcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    |||||||||| |||||| | ||||||||||| |||||||||   |||| ||||||| | | ||| ||||||||||| |||||||| |||||    
T  4274657 ctcaagttcggctcatttgtttcatgaatcaggttcaacgagataattgtcgaatcaagtttcgaactattttcgagttggttcggttcat 4274567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 28470867 - 28470939
Alignment:
Q  121 gactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggtt 194  Q
    |||||||| |||||||||| |||||||||||||| ||||| |||||||| | ||| ||| ||||||| ||||||    
T  28470867 gactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagt-tcgtacttttttcgagttggtt 28470939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 196
Target Start/End: Complemental strand, 32397867 - 32397715
Alignment:
Q  44 tgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaa 143  Q
    |||| ||||||| |||| | | || ||||||||||||| |||| ||| || || | ||||||||| |  ||||||||| || ||| | |||||||| |||    
T  32397867 tgaatcaaacgagtcgagctacatatagttcaagttcagctcaattagttgacgaacttaatttttagttcaagttcggcttatttgattcatgaaccaa 32397768  T
Q  144 gttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcg 196  Q
    ||||  |||||||||| |||| ||||||  || ||| |  |||||||||||||    
T  32397767 gttcggcgaatcaattgtcgagtcgaattacgaactttaatcgaattggttcg 32397715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 16742427 - 16742380
Alignment:
Q  122 actcattaggttcatgaatcaagttcaacgaatcaattatcgaatcga 169  Q
    ||||||| |||||||||| |||||||||||||||||||  ||||||||    
T  16742427 actcatttggttcatgaaccaagttcaacgaatcaattgccgaatcga 16742380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 148
Target Start/End: Complemental strand, 26127640 - 26127561
Alignment:
Q  69 tagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttca 148  Q
    ||||||||||| ||||||||||||||||||  |||||||| || | || ||||||||| | | |||||||| ||| ||||    
T  26127640 tagttcaagtttaactcatttatttaacaaatttaatttttaagtgaatttcgactcaattgattcatgaaccaaattca 26127561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 115
Target Start/End: Original strand, 41822079 - 41822153
Alignment:
Q  43 atgaaccaaacgattcgaac--catatttagttcaagttcaactcatttatttaacaagcttaattttaaactca 115  Q
    ||||||||||||| ||||||   |||| ||||| ||||||| |||||||| ||||||| ||||||||| ||||||    
T  41822079 atgaaccaaacgaatcgaactatatatatagtttaagttcagctcatttagttaacaaacttaattttcaactca 41822153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 115
Target Start/End: Complemental strand, 16742497 - 16742423
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactca 115  Q
    ||||||||||| ||| |||||| ||||  |  ||||||||| |||||||||||||| | ||||||||| ||||||    
T  16742497 tcatgaaccaatcgaatcgaactatatacaactcaagttcagctcatttatttaacgaacttaattttcaactca 16742423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 38493147 - 38493082
Alignment:
Q  43 atgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaatttt 108  Q
    ||||||||||||| || ||  |||| ||  |||||||||||||||||| ||||||| |||||||||    
T  38493147 atgaaccaaacgagtcaaattatatataactcaagttcaactcatttaattaacaaacttaatttt 38493082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 49083374 - 49083297
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaac 150  Q
    |||||| || |||||||| ||||| |  |||||||| |  |||||||| |||||||||||| ||||| ||||||||||    
T  49083374 tcaagtacagctcatttaattaacgaatttaattttcagatcaagttcaactcattaggtttatgaaccaagttcaac 49083297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 50137407 - 50137480
Alignment:
Q  87 tttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaatta 160  Q
    |||||||||| || |||||||| | ||||||||||||||||  ||||||| || |||  ||||||||| |||||    
T  50137407 tttatttaacgagtttaattttcacctcaagttcgactcatctggttcataaaccaaaatcaacgaattaatta 50137480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 9e-57; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 35 - 202
Target Start/End: Complemental strand, 18250171 - 18250004
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    |||||||||||||||| |||| ||||| |||| ||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||| |||||    
T  18250171 gctggttcatgaaccagacgagtcgaatcatacttagttcaagttcaactcatttatttaacgagcataattttcaactcaagttcgactcatttggttc 18250072  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||| ||||||||||||||||||||||||||||| ||| | ||||||||||| |||||||| |||||    
T  18250071 atgaaccaagttcaacgaatcaattatcgaatcgagtcttgaactattttcgagttggttcggttcat 18250004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 35 - 202
Target Start/End: Original strand, 26719782 - 26719949
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    ||||||||||||| ||||||| |||||||||| | ||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||| |||||    
T  26719782 gctggttcatgaatcaaacgagtcgaaccatactaagttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttc 26719881  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||| ||||| ||| ||| ||||||||||||||| | ||| ||||||||||| |||||||| |||||    
T  26719882 atgaaccaagtccaatgaaccaattatcgaatcgagtatcgaactattttcgagttggttcgattcat 26719949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 35 - 202
Target Start/End: Complemental strand, 46573790 - 46573623
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    ||||||||||||||||||||| |||||||||| | |  |||||||| ||||||||||||||| ||||||||||| |||| |||||||||||||| |||||    
T  46573790 gctggttcatgaaccaaacgagtcgaaccatactcaactcaagttcgactcatttatttaacgagcttaattttcaacttaagttcgactcatttggttc 46573691  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||| |||||||||||| |||||||||||||||||||||| | |||||| || |||||||| |||||    
T  46573690 atgaaccaagttcaacgagtcaattatcgaatcgaatctcgaattatttttgagttggttcggttcat 46573623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 35 - 202
Target Start/End: Complemental strand, 17025539 - 17025372
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    |||||||||||||| |||||| |||||||||| | |  |||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||| |||||    
T  17025539 gctggttcatgaacaaaacgagtcgaaccatactcaactcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttc 17025440  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
     |||| |||||||||||| ||||||||||||||||| || | ||||||||||| |||||||| |||||    
T  17025439 gtgaaccaagttcaacgagtcaattatcgaatcgaaccttgaactattttcgagttggttcggttcat 17025372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 35 - 202
Target Start/End: Complemental strand, 18740396 - 18740229
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    |||||||||||||| |||||| |||||||||| | |  |||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||| |||||    
T  18740396 gctggttcatgaactaaacgagtcgaaccatactcaactcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttc 18740297  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||| |||||| || || ||||||||| |||||||||||| ||||||||||| |||||||| |||||    
T  18740296 atgaaccaagtttaatgagtcaattatcaaatcgaatctcgaactattttcgagttggttcggttcat 18740229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 35 - 202
Target Start/End: Complemental strand, 33899122 - 33898955
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    ||||||||||||||||||||| |||||||||| | | || |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||    
T  33899122 gctggttcatgaaccaaacgagtcgaaccatactaaatttaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttc 33899023  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||| ||||| ||| |||  |||| ||||||||||| ||| ||||||||||| |||||||| |||||    
T  33899022 atgaaccaagtccaatgaactaattctcgaatcgaatatcgaactattttcgagttggttcggttcat 33898955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 35 - 202
Target Start/End: Complemental strand, 35543731 - 35543567
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    |||||||||||||||| |||| ||||| |||| |||||||||||||||||||||||||   | ||||||||||| |||||||||||||||||||  ||||    
T  35543731 gctggttcatgaaccagacgagtcgaatcatacttagttcaagttcaactcatttatt---cgagcttaattttcaactcaagttcgactcatttagttc 35543635  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||| |||||||||||||||||||||||||| || ||||  ||||||||||| |||||||| |||||    
T  35543634 atgaaccaagttcaacgaatcaattatcgaatggagtctcaaactattttcgagttggttcgattcat 35543567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 35 - 202
Target Start/End: Complemental strand, 21760761 - 21760594
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    ||||||||||||| | ||||| ||||||||||   || |||||||||||||||||||||||| || ||| |||| ||||||||||||||||||| |||||    
T  21760761 gctggttcatgaatctaacgagtcgaaccatacgaagctcaagttcaactcatttatttaacgagtttagttttcaactcaagttcgactcatttggttc 21760662  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
     ||||  |||||||||||||||||||||||||||| | ||| ||||||||||| |||||||| |||||    
T  21760661 gtgaacaaagttcaacgaatcaattatcgaatcgagtttcgaactattttcgagttggttcggttcat 21760594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 39 - 202
Target Start/End: Original strand, 36472410 - 36472573
Alignment:
Q  39 gttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatga 138  Q
    ||||||||||||||||| |||||||||  |  |||||||||||||| ||||||||||| ||||||||||| |||||||||||| |||||| |||||||||    
T  36472410 gttcatgaaccaaacgagtcgaaccatgctcggttcaagttcaacttatttatttaacgagcttaattttcaactcaagttcggctcatttggttcatga 36472509  T
Q  139 atcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    | |||||||||||||||| |||||||||||| | ||    ||||||||| |||||||| |||||    
T  36472510 accaagttcaacgaatcatttatcgaatcgagtatcaagttattttcgagttggttcggttcat 36472573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 37 - 192
Target Start/End: Complemental strand, 49034400 - 49034245
Alignment:
Q  37 tggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcat 136  Q
    |||||||| || |||| || |||||  |||| |||||||||||| |||||||||||| || ||||||||||| ||||||||||||||||||| |||||||    
T  49034400 tggttcataaatcaaatgagtcgaattatatgtagttcaagttcgactcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcat 49034301  T
Q  137 gaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattgg 192  Q
    ||| ||||||||||||| |||||| |||||||||| ||| ||||||||||| ||||    
T  49034300 gaaccaagttcaacgaaacaattaccgaatcgaatttcgaactattttcgagttgg 49034245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 35 - 202
Target Start/End: Original strand, 33019269 - 33019435
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    ||||||||||||||||||| | |||||| ||| | ||||||| ||||||| ||| ||||||| || |||||||| ||||||||||||||| ||| | |||    
T  33019269 gctggttcatgaaccaaacaagtcgaactatagtaagttcaaattcaacttatt-atttaacgagtttaattttcaactcaagttcgacttatttgattc 33019367  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
     |||| ||||||||||||| ||||||||||||||| | ||| |||||||| || |||||||| |||||    
T  33019368 gtgaaccaagttcaacgaaccaattatcgaatcgagtatcgaactatttttgagttggttcggttcat 33019435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 35 - 165
Target Start/End: Original strand, 30919389 - 30919519
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    ||||||||||||||| ||||| ||||||||||   || ||||||||||||||||||| |||| || ||| |||| ||||||||||||||||||| |||||    
T  30919389 gctggttcatgaacctaacgagtcgaaccatacgaagctcaagttcaactcatttatctaacgagtttagttttcaactcaagttcgactcatttggttc 30919488  T
Q  135 atgaatcaagttcaacgaatcaattatcgaa 165  Q
     | || |||||||||||||||||||||||||    
T  30919489 gtaaaccaagttcaacgaatcaattatcgaa 30919519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 7447849 - 7448010
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| ||||||||| | |||||||||||||||||||||| ||||| | ||||||||| | |||||||||| |||||| ||||||||||     
T  7447849 tcatgaacctaacgaatcgaaccatctatagttcaagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaac 7447948  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||| ||| ||||| |||| ||||||   | ||||| ||||| |||||||| |||||    
T  7447949 caagttcaatgaaccaattgtcgagtcgaattatgaactatattcgagttggttcggttcat 7448010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 184
Target Start/End: Original strand, 32356928 - 32357077
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    |||||||||||||||||| || ||||   |||  ||||| ||||||||||| |||| ||||| | ||| ||||| ||||||| |||| ||||||  ||||    
T  32356928 gctggttcatgaaccaaatgagtcgagttatacatagtttaagttcaactcgtttacttaacgaactttattttcaactcaaattcggctcatttagttc 32357027  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactatttt 184  Q
    |||||||||||||||||||| |||||||||||||| ||||| ||||||||    
T  32357028 atgaatcaagttcaacgaattaattatcgaatcgagtctcgaactatttt 32357077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 41 - 187
Target Start/End: Complemental strand, 29037952 - 29037806
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||| ||||||| ||||||||||| ||||| || |||||||||||| ||||||   ||||||||| |||||||||||| |||||| ||||||||||     
T  29037952 tcatgaatcaaacgagtcgaaccatatatagtttaaattcaactcatttgtttaacggacttaattttcaactcaagttcgtctcatttggttcatgaac 29037853  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcga 187  Q
     ||||||| | ||| ||||| |||||||| ||||  |||||||||||    
T  29037852 aaagttcagcaaattaattaccgaatcgagtctcaaactattttcga 29037806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 69 - 202
Target Start/End: Original strand, 31491816 - 31491949
Alignment:
Q  69 tagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcg 168  Q
    |||||||||||||||| ||||||||||| | |||||| || |  | |||||||||||||| ||||||||  ||||||||||||||| |||||||||||||    
T  31491816 tagttcaagttcaactaatttatttaacgaacttaatattgagtttaagttcgactcatttggttcatgtgtcaagttcaacgaattaattatcgaatcg 31491915  T
Q  169 aatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||  |||||||| || ||| |||| |||||    
T  31491916 aatctcaaactatttttgagttgattcggttcat 31491949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 202
Target Start/End: Complemental strand, 5776302 - 5776141
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| |||||| |||| ||| ||||||||| |||||||| ||||| | ||||||||| | ||||||| |  ||| |||||||||||||     
T  5776302 tcatgaaccgaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 5776203  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||||| || || |||||| |||||| ||| |||||  |||| |||||||| |||||    
T  5776202 caagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcat 5776141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 36926972 - 36927133
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    |||||| || ||||| |||||| |||| ||| |||||||||||||||||| ||||| | ||||||||| | ||||||| | |||| |||||||||||||     
T  36926972 tcatgagcctaacgagtcgaactatatgtagctcaagttcaactcatttaattaacgaacttaatttttagctcaagtccaactcgttaggttcatgaac 36927071  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||||| || |  |||||| |||||| ||| |||||  |||| |||||||| |||||    
T  36927072 caagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcat 36927133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 37334251 - 37334412
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| || || |||||| |||| ||| ||||||||| |||||||| ||||| | ||||||||| | ||||||| |  ||| |||||||||||||     
T  37334251 tcatgaacctaatgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 37334350  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||||| || || ||||||||||||| ||| |||||  |||| |||||||| |||||    
T  37334351 caagttcaacggattaaatatcgaatcgaatgtcgaactataatcgagttggttcggttcat 37334412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 42072056 - 42072186
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| |||||| |||| ||| ||||||||| |||||||| ||||| | ||||||||| | ||||||| |  ||| ||||||||||||||    
T  42072056 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaat 42072155  T
Q  141 caagttcaacgaatcaattatcgaatcgaat 171  Q
    ||||||||||| || |  |||||||||||||    
T  42072156 caagttcaacggattagatatcgaatcgaat 42072186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 45176218 - 45176348
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| |||||  |||| ||| |||||||||||||||||| ||||| | ||||||||| | || ||||||  ||| || ||||||||||     
T  45176218 tcatgaacctaacgagtcgaattatatgtagctcaagttcaactcatttaattaacgaacttaattttcagctaaagttcagctcgtttggttcatgaac 45176317  T
Q  141 caagttcaacgaatcaattatcgaatcgaat 171  Q
    ||||||||||| || ||||||||| ||||||    
T  45176318 caagttcaacggattaattatcgagtcgaat 45176348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 73 - 202
Target Start/End: Original strand, 33935513 - 33935642
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatc 172  Q
    ||||||||| ||||||| |||||| | ||||||||| | |||||||||  ||| || |||||||||| |||||||||||| | |||||||||||||| ||    
T  33935513 tcaagttcatctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattatcgaatcgagtc 33935612  T
Q  173 tcgcactattttcgaattggttcgtttcat 202  Q
     |  |||||| |||| |||||||| |||||    
T  33935613 ccaaactattgtcgagttggttcgattcat 33935642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 43052845 - 43053006
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||| | ||||| |||||| |||| ||| ||||||||| ||||| || ||||| | |||||||||   ||||||| |  |||||||||||||||||     
T  43052845 tcatgaatctaacgagtcgaactatatgtagctcaagttcagctcatctaattaacgaacttaattttcggctcaagtccagctcattaggttcatgaac 43052944  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||||| || || |||||| |||||| ||| |||||  |||| |||||||| |||||    
T  43052945 caagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcat 43053006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 37401679 - 37401608
Alignment:
Q  100 cttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaat 171  Q
    ||||||||| |||||||||| | |||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  37401679 cttaattttcaactcaagtttggctcatttggttcatgaatcaagttcaacaaatcaattttcgaatcgaat 37401608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 43 - 169
Target Start/End: Original strand, 22075038 - 22075164
Alignment:
Q  43 atgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatca 142  Q
    ||||||||| ||| |||||| ||||  || ||||||||| |||||||||||||| | ||||||||| | |||||||||  |||||| ||||| |||| ||    
T  22075038 atgaaccaatcgagtcgaactatatacagatcaagttcagctcatttatttaacgaacttaattttcagctcaagttcagctcatttggttcgtgaacca 22075137  T
Q  143 agttcaacgaatcaattatcgaatcga 169  Q
     ||||||||| | |||| |||||||||    
T  22075138 cgttcaacgagttaattgtcgaatcga 22075164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 28949931 - 28949769
Alignment:
Q  40 ttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaa 139  Q
    |||||||||| ||||| |||||| |||| ||| ||||||||| |||||||| ||||| | ||||||||| | ||||| | |  ||| |||||||||||||    
T  28949931 ttcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaatttttagctcaattccagctcgttaggttcatgaa 28949832  T
Q  140 tcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
     ||||||||||| || |  |||||| |||||| ||| |||||  |||| ||| |||| |||||    
T  28949831 ccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttgattcggttcat 28949769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 41 - 202
Target Start/End: Complemental strand, 44422074 - 44421912
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaa-ttttaaactcaagttcgactcattaggttcatgaa 139  Q
    ||||||||||| ||| |||||| ||||  || ||||||||| ||||||| |||||| | ||||| |||| | |||||||||  ||| || ||||||||||    
T  44422074 tcatgaaccaaccgagtcgaactatataaagctcaagttcagctcatttgtttaacgaacttaaattttcagctcaagttcagctcgtttggttcatgaa 44421975  T
Q  140 tcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
     |||||||||||| | |||| ||||||||| || |  |||||| |||| |||||||| |||||    
T  44421974 ccaagttcaacgagttaattgtcgaatcgagtcccaaactattgtcgagttggttcggttcat 44421912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 153
Target Start/End: Original strand, 45055699 - 45055813
Alignment:
Q  39 gttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatga 138  Q
    |||| |||| ||||||| |||||| |||| ||  |||||||||||||||||| ||||| | |||||| || | |||||||||| ||| || |||||||||    
T  45055699 gttcgtgaatcaaacgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatga 45055798  T
Q  139 atcaagttcaacgaa 153  Q
    | |||||||||||||    
T  45055799 accaagttcaacgaa 45055813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 48505960 - 48505850
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||| ||| ||||| |||||| |||| ||| ||||||||| |||||||| ||||| | ||||||||| | ||||||| |  |||||||||||||||||     
T  48505960 tcatgtacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcattaggttcatgaac 48505861  T
Q  141 caagttcaacg 151  Q
    |||||||||||    
T  48505860 caagttcaacg 48505850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 41 - 202
Target Start/End: Complemental strand, 5795108 - 5794947
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| | |||| |||| ||| ||||||||| |||||||| ||||| | ||||||||| | ||||||| |  ||| |||||||||||||     
T  5795108 tcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 5795009  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||||| || |  |||||| |||||| ||| |||||  |||  |||||||| |||||    
T  5795008 caagttcaacggattagatatcgagtcgaatgtcgaactataatcgggttggttcggttcat 5794947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 23237657 - 23237576
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaat 154  Q
    |||||||||||||||||| ||||| | ||||||| | |||||||||||| || |||||||||||||| ||||| ||||||||    
T  23237657 tcaagttcaactcatttaattaacgaacttaattcttaactcaagttcggctaattaggttcatgaaccaagtccaacgaat 23237576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 202
Target Start/End: Original strand, 33124700 - 33124829
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatc 172  Q
    |||| |||| |||||||||||||| | ||||||||| | ||||||||| | ||||| ||||||| || |||||||||||| | |||| ||||||||| |     
T  33124700 tcaaattcagctcatttatttaacgaacttaattttcagctcaagttcaattcatttggttcataaaccaagttcaacgagttaattgtcgaatcgagtt 33124799  T
Q  173 tcgcactattttcgaattggttcgtttcat 202  Q
    ||  |||||| |||| |||||||| |||||    
T  33124800 tcaaactattgtcgagttggttcggttcat 33124829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 73 - 169
Target Start/End: Original strand, 10618926 - 10619022
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcga 169  Q
    ||||||||| |||||||||||||| | ||||||||| | |||||||||  ||||||  ||||||||| |||||||||||| | |||| |||||||||    
T  10618926 tcaagttcagctcatttatttaacgaacttaattttcagctcaagttcagctcatttagttcatgaaccaagttcaacgagttaattgtcgaatcga 10619022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 39 - 153
Target Start/End: Complemental strand, 40480225 - 40480110
Alignment:
Q  39 gttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactc-attaggttcatg 137  Q
    |||| |||||||||||| |||||| |||| ||  |||||||||||||||||| ||||| | |||||| || | |||||||||| |||  || ||||||||    
T  40480225 gttcgtgaaccaaacgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgttttggttcatg 40480126  T
Q  138 aatcaagttcaacgaa 153  Q
    || |||||||||||||    
T  40480125 aaccaagttcaacgaa 40480110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 81 - 152
Target Start/End: Original strand, 48634460 - 48634531
Alignment:
Q  81 aactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacga 152  Q
    |||||||||||||||| | ||||||||| | ||||||||| ||||||| |||||||||| ||||||||||||    
T  48634460 aactcatttatttaacgaacttaatttttagctcaagttcaactcatttggttcatgaaccaagttcaacga 48634531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 153
Target Start/End: Complemental strand, 11595970 - 11595856
Alignment:
Q  39 gttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatga 138  Q
    |||| |||||||||| | |||||| |||| ||  ||||| |||||||||||| ||||| | |||||| || | |||||||||| ||| || |||||||||    
T  11595970 gttcgtgaaccaaacaagtcgaactatatataactcaaggtcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatga 11595871  T
Q  139 atcaagttcaacgaa 153  Q
    | |||||||||||||    
T  11595870 accaagttcaacgaa 11595856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 41 - 202
Target Start/End: Complemental strand, 666019 - 665858
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| |||| | |||| ||| |||| |||| |||||||| ||||| | ||||||||| | ||||||| |  ||| |||||||||||||     
T  666019 tcatgaacctaacgagtcgagctatatgtagctcaaattcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 665920  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||| || |||| || || |||||| |||||| ||| |||||  |||| |||||||| |||||    
T  665919 caaatttaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcat 665858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 27231652 - 27231581
Alignment:
Q  100 cttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaat 171  Q
    ||||||||| |  ||||||||| |||||| | | |||||||||||||| |||||||||||||||||||||||    
T  27231652 cttaattttcagttcaagttcggctcatttgatacatgaatcaagttcgacgaatcaattatcgaatcgaat 27231581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 73 - 164
Target Start/End: Complemental strand, 37101238 - 37101148
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcga 164  Q
    ||||||| |||| ||||||||||||| ||||||||| ||||||||||| ||||||| | ||| |||||| ||||||||  || |||||||||    
T  37101238 tcaagttaaacttatttatttaacaaacttaattttcaactcaagttc-actcatttgattcgtgaatcgagttcaacagattaattatcga 37101148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 26216245 - 26216355
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| |||||| |||| ||| ||||||||| ||| |||| ||||| | ||||||||| | ||||||| |  ||| |||||||||| ||     
T  26216245 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcctttaattaacgaacttaattttcagctcaagtccagctcgttaggttcataaac 26216344  T
Q  141 caagttcaacg 151  Q
    |||||||||||    
T  26216345 caagttcaacg 26216355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 202
Target Start/End: Complemental strand, 222398 - 222237
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||||| ||| |||||| ||||  || ||||||||| ||||||| |||||| |  |||||||| |  ||||||||  ||| || ||||||||||     
T  222398 tcatgaaccaaccgagtcgaactatataaagctcaagttcagctcatttgtttaacgaatttaattttcagttcaagttcagctcgtttggttcatgaac 222299  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||| |||||||| | |||| ||||||| | || |  |||||| |||| |||||||| |||||    
T  222298 caaattcaacgagttaattgtcgaatcaagtcccaaactattgtcgagttggttcggttcat 222237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 202
Target Start/End: Complemental strand, 3930888 - 3930727
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||| ||| ||||| | |||| |||| ||| ||||||||| |||||||| ||||| | ||||||||| | ||||||| |  ||| ||||||||||| |     
T  3930888 tcatgtacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatggac 3930789  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||||| || |  |||||| |||||| ||| |||||  |||| ||| |||| |||||    
T  3930788 caagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttgtttcggttcat 3930727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 20400969 - 20401130
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    |||| |||||||||| |||||| |||| ||  ||||||||| |||||||| ||||  | |||||| || | |||||||||   ||| ||||||||||||     
T  20400969 tcattaaccaaacgagtcgaactatatgtaactcaagttcagctcatttaattaaagaacttaatatttagctcaagttcagttcagtaggttcatgaac 20401068  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||| ||||| | |  ||||| ||| |||||| ||| ||||| ||||| |||||||| |||||    
T  20401069 caaattcaatggactaattaccgagtcgaatttcgaactatattcgagttggttcggttcat 20401130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 171
Target Start/End: Original strand, 3942152 - 3942279
Alignment:
Q  44 tgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaa 143  Q
    ||||||||||||  ||||| | || ||| ||||||||| |||| ||| || || | ||||||||| | |||||||  |  ||||| |||||||||| |||    
T  3942152 tgaaccaaacgagccgaactacatatagctcaagttcagctcaattaattcacgaacttaattttcagctcaagtctggttcatttggttcatgaaccaa 3942251  T
Q  144 gttcaacgaatcaattatcgaatcgaat 171  Q
    |||||| ||||||| | |||||||||||    
T  3942252 gttcaatgaatcaactgtcgaatcgaat 3942279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 196
Target Start/End: Complemental strand, 23227139 - 23227016
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatc 172  Q
    ||||||||  |||||||||||||| | ||||||||| | |||||||||  |||||| | |||||| | |||||||||| |   |||| ||||||||| |     
T  23227139 tcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatttgattcatgtaccaagttcaacaagataattgtcgaatcgagtt 23227040  T
Q  173 tcgcactattttcgaattggttcg 196  Q
    ||| |||||| |||| ||||||||    
T  23227039 tcgaactattgtcgagttggttcg 23227016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 196
Target Start/End: Complemental strand, 23236292 - 23236169
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatc 172  Q
    ||||||||  |||||||||||||| | ||||||||| | |||||||||  |||||| | |||||| | |||||||||| |   |||| ||||||||| |     
T  23236292 tcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatttgattcatgtaccaagttcaacaagataattgtcgaatcgagtt 23236193  T
Q  173 tcgcactattttcgaattggttcg 196  Q
    ||| |||||| |||| ||||||||    
T  23236192 tcgaactattgtcgagttggttcg 23236169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 193
Target Start/End: Complemental strand, 46652720 - 46652653
Alignment:
Q  126 attaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggt 193  Q
    |||||||||||||| ||||| ||||  || |||||||||||||||| ||| ||||| |||||||||||    
T  46652720 attaggttcatgaaccaagtccaacagattaattatcgaatcgaatttcgaactatattcgaattggt 46652653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 159
Target Start/End: Original strand, 17608717 - 17608803
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaatt 159  Q
    |||||||||||||| ||| || || | ||||||||| |  ||||||||| |||||| ||||||| || ||||||| |||||||||||    
T  17608717 tcaagttcaactcaattagttgacgaacttaattttcagatcaagttcggctcatttggttcatcaaccaagttcgacgaatcaatt 17608803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 150
Target Start/End: Complemental strand, 33171706 - 33171597
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||||| ||| || ||| ||||  |  ||||||||  |||||||||||||  | ||||||||| | |||||||||  |||||| ||||||| |||    
T  33171706 tcatgaaccaaccgagtcaaactatatacaactcaagttcggctcatttatttaatgaacttaatttttagctcaagttcagctcatttggttcataaat 33171607  T
Q  141 caagttcaac 150  Q
    ||||||||||    
T  33171606 caagttcaac 33171597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 37106858 - 37106929
Alignment:
Q  100 cttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaat 171  Q
    ||||||||| | |||||||||| |||||| ||| ||| ||  |||||| |||||| ||||||||||||||||    
T  37106858 cttaatttttagctcaagttcggctcatttggtacattaactaagttcgacgaattaattatcgaatcgaat 37106929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 139
Target Start/End: Original strand, 15434216 - 15434314
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaa 139  Q
    ||||||| | ||||| |||||| | || ||| ||||||||| |||||||| ||||| | ||||||||| | ||||||| |  ||| |||||||||||||    
T  15434216 tcatgaagctaacgagtcgaactagatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaa 15434314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 145
Target Start/End: Original strand, 37239840 - 37239910
Alignment:
Q  75 aagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagt 145  Q
    |||||||||||||||  ||||||| ||| ||||||| ||||| |||  |||||| |||||||||| |||||    
T  37239840 aagttcaactcatttgattaacaaacttgattttaagctcaaattcatctcatttggttcatgaaccaagt 37239910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 112; Significance: 9e-57; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 35 - 202
Target Start/End: Original strand, 12710664 - 12710831
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    ||||||||||||||||||||| |||||||||| | |  |||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||| |||||    
T  12710664 gctggttcatgaaccaaacgagtcgaaccatactcaactcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttc 12710763  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||| |||||||||||| |||||||||||||||||||||| ||||||||||| |||||||| |||||    
T  12710764 atgaaccaagttcaacgagtcaattatcgaatcgaatctcgaactattttcgagttggttcggttcat 12710831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 35 - 196
Target Start/End: Original strand, 40943523 - 40943684
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    ||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||    
T  40943523 gctggttcatgaaccaaacgagtcgaaccatactaagttcaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttc 40943622  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcg 196  Q
    ||||| ||||| ||| ||| |||||||| |||||| | ||| ||||||||||| ||||||||    
T  40943623 atgaaccaagtccaatgaaccaattatcaaatcgagtatcgaactattttcgagttggttcg 40943684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 35 - 196
Target Start/End: Complemental strand, 30662309 - 30662148
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    ||||||||||||||||||||| |||||| ||| | |  |||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||| | |||    
T  30662309 gctggttcatgaaccaaacgagtcgaactatactcaactcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttgattc 30662210  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcg 196  Q
    ||||| |||||||||||| |||||||||||||||||||||  ||||||||||| ||||||||    
T  30662209 atgaaccaagttcaacgagtcaattatcgaatcgaatctcaaactattttcgagttggttcg 30662148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 35 - 194
Target Start/End: Complemental strand, 20550380 - 20550221
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    ||||||||||||| ||||||| |||||||||| ||||||||||| ||||||||||||||||| |  |||||||| |||||| |||||||||||| |||||    
T  20550380 gctggttcatgaatcaaacgagtcgaaccatacttagttcaagtacaactcatttatttaacgaatttaattttcaactcatgttcgactcatttggttc 20550281  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggtt 194  Q
     |||| |||||||||| |||||||||||||||||| | ||| ||||||||||| ||||||    
T  20550280 gtgaaccaagttcaacaaatcaattatcgaatcgagtatcgaactattttcgagttggtt 20550221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 41 - 202
Target Start/End: Complemental strand, 26049712 - 26049551
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| ||||| |||| | |  |||||||| ||| ||||||||||| ||||||||||| ||||||||||||||||||| | ||||||||     
T  26049712 tcatgaacctaacgaatcgaatcatactcaactcaagttcgactaatttatttaacgagcttaattttcaactcaagttcgactcatttgattcatgaac 26049613  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||||   |||||||||||||||||||||  ||||||||||| |||||||| |||||    
T  26049612 caagttcaacaggtcaattatcgaatcgaatctcaaactattttcgagttggttcggttcat 26049551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 145
Target Start/End: Complemental strand, 54432369 - 54432259
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    ||||||||||||||||||||| ||||||| || | ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||  ||||    
T  54432369 gctggttcatgaaccaaacgagtcgaaccgtactaagttcaagttcaactcatttatttaacgagcttaatttttaactcaagttcgactcatttagttc 54432270  T
Q  135 atgaatcaagt 145  Q
    ||||| |||||    
T  54432269 atgaaccaagt 54432259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 37 - 192
Target Start/End: Complemental strand, 15822525 - 15822370
Alignment:
Q  37 tggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcat 136  Q
    ||||||||||| ||||||| || ||  |||  || |||||||||  ||||||||||| || ||||||||||| ||||||||||| ||||| | || ||||    
T  15822525 tggttcatgaatcaaacgagtctaattatacgtaattcaagttcggctcatttatttgacgagcttaattttcaactcaagttctactcaattggatcat 15822426  T
Q  137 gaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattgg 192  Q
    ||| ||||||||||||| |||||| |||||||||| ||| ||||||||||||||||    
T  15822425 gaaccaagttcaacgaaacaattaccgaatcgaatttcgaactattttcgaattgg 15822370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 194
Target Start/End: Complemental strand, 48731010 - 48730856
Alignment:
Q  40 ttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaa 139  Q
    ||||||||  |||||| |||||| ||| ||| || | |||||||||||||||||| | || ||||||||  ||| ||||| |||| ||| ||||||||||    
T  48731010 ttcatgaattaaacgaatcgaactatacttaatttatgttcaactcatttatttatcgagtttaattttgcacttaagtttgacttatttggttcatgaa 48730911  T
Q  140 tcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggtt 194  Q
    ||||||| ||||||| ||||| | |||||||||||| ||||||||||| ||||||    
T  48730910 tcaagtttaacgaattaattagcaaatcgaatctcgaactattttcgagttggtt 48730856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 41 - 202
Target Start/End: Complemental strand, 9505293 - 9505132
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||||| |||  ||||| |||| ||  ||||||||| |||||||||||||| | ||||||||| | ||||||||| ||||||| ||||||||||     
T  9505293 tcatgaaccaaccgaaccgaactatatatatctcaagttcagctcatttatttaacgaacttaattttcagctcaagttcaactcatttggttcatgaac 9505194  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    |||||||||||| | |||| ||||||||| |  || |||||| |||| |||||||| |||||    
T  9505193 caagttcaacgagttaattgtcgaatcgagttccgaactattgtcgagttggttcggttcat 9505132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 44 - 171
Target Start/End: Complemental strand, 54393612 - 54393485
Alignment:
Q  44 tgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaa 143  Q
    |||||||||||| |||||| | || ||||||||||||  |||| |||||| || | ||||||||| | |||||||||| |||||| |||| ||||| |||    
T  54393612 tgaaccaaacgagtcgaactacatatagttcaagttcggctcaattatttgacgaacttaattttcagctcaagttcggctcatttggtttatgaaccaa 54393513  T
Q  144 gttcaacgaatcaattatcgaatcgaat 171  Q
    |||||||||||||||| |||||||||||    
T  54393512 gttcaacgaatcaattgtcgaatcgaat 54393485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 44 - 171
Target Start/End: Complemental strand, 33438900 - 33438773
Alignment:
Q  44 tgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaa 143  Q
    |||||||||| | |||||| | || |||||||| || | |||| ||| || || | ||||||||| | ||||||||||||||||| |||||||||| |||    
T  33438900 tgaaccaaacaagtcgaactacatatagttcaactttagctcaattagttgacgaacttaattttcagctcaagttcgactcatttggttcatgaaccaa 33438801  T
Q  144 gttcaacgaatcaattatcgaatcgaat 171  Q
    |||||||||||||||| |||||||||||    
T  33438800 gttcaacgaatcaattgtcgaatcgaat 33438773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 41 - 195
Target Start/End: Complemental strand, 39469703 - 39469549
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| |||||| || | || |||||||| | |||||||| ||||| | ||||||||| | |||||||||| |||||| | ||||||||     
T  39469703 tcatgaacctaacgaatcgaacaatctataattcaagtttagctcatttaattaacgaacttaattttcagctcaagttcggctcatttgattcatgaac 39469604  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttc 195  Q
    ||||||||| | | |||||||||||||||||  || ||||| ||||| |||||||    
T  39469603 caagttcaatggaccaattatcgaatcgaattacgaactatattcgagttggttc 39469549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 41 - 181
Target Start/End: Original strand, 41609856 - 41609996
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| |||||| |||| ||| ||||||||| |||||||| ||||| | ||||||||| | ||||||| |  ||| |||||||||||||     
T  41609856 tcatgaacccaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 41609955  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactat 181  Q
    ||||||||||| || || |||||| |||||| ||| |||||    
T  41609956 caagttcaacggattaaatatcgagtcgaatgtcgaactat 41609996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 41 - 149
Target Start/End: Complemental strand, 46293385 - 46293277
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||||||||| |||||| || | ||||| |||||||||||||||| ||||| | ||||||||| | |||||||||| |||||| ||||||||||     
T  46293385 tcatgaaccaaacgaatcgaactatttatagtttaagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaac 46293286  T
Q  141 caagttcaa 149  Q
    ||| |||||    
T  46293285 caaattcaa 46293277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 41 - 169
Target Start/End: Original strand, 52934780 - 52934908
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||||| ||| |||||| |||| ||| ||||||||  |||||||||||||| | |||||||||   |||||||||  |||||| ||||||||||     
T  52934780 tcatgaaccaatcgagtcgaactatatatagatcaagttcggctcatttatttaacgaacttaattttctgctcaagttcagctcatttggttcatgaac 52934879  T
Q  141 caagttcaacgaatcaattatcgaatcga 169  Q
    ||||||||| || | ||||||||||||||    
T  52934880 caagttcaatgagttaattatcgaatcga 52934908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 49026583 - 49026641
Alignment:
Q  37 tggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaa 95  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  49026583 tggttcatgaaccaaacgagtcgaaccatatttagttcaagttcaactcgtttatttaa 49026641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 41 - 174
Target Start/End: Original strand, 26136301 - 26136434
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||||||||| || ||| |||| ||||| | ||||||||||||| |||||||| | ||||||| |||||||||||| |||| |  |||||| ||     
T  26136301 tcatgaaccaaacgagtcaaactatatgtagtttatgttcaactcatttgtttaacaaacataattttgaactcaagttcggctcacttagttcataaac 26136400  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctc 174  Q
    |||||||||| ||  ||||| |||||||| ||||    
T  26136401 caagttcaacaaactaattaacgaatcgagtctc 26136434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 32689137 - 32689298
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||  ||||| |||||| |||| ||| ||||||||| |||||||| ||||| | ||||||||| | ||||||| |  ||| |||||||||||||     
T  32689137 tcatgaacttaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 32689236  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||||| || |  |||||| |||||| ||| |||||  |||| |||||||| |||||    
T  32689237 caagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcat 32689298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 73 - 202
Target Start/End: Original strand, 52199429 - 52199558
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatc 172  Q
    ||||||||| ||||||| |||||| | ||||||||| | |||||||||  ||| || |||||||||| |||||||||||||| |||| ||||||||| ||    
T  52199429 tcaagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgaattaattgtcgaatcgagtc 52199528  T
Q  173 tcgcactattttcgaattggttcgtttcat 202  Q
     |  |||||| |||| |||||||| |||||    
T  52199529 ccaaactattgtcgagttggttcgattcat 52199558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 39 - 150
Target Start/End: Original strand, 5418644 - 5418755
Alignment:
Q  39 gttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatga 138  Q
    |||| ||||||||| || |||||| |||| ||  |||||||||||||||||| ||||| | |||||| || | |||||||||||||| || |||||||||    
T  5418644 gttcgtgaaccaaatgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcgactcgtttggttcatga 5418743  T
Q  139 atcaagttcaac 150  Q
    |  |||||||||    
T  5418744 actaagttcaac 5418755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 45714735 - 45714794
Alignment:
Q  112 ctcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaat 171  Q
    ||||||||||||||||| | || ||||||||||||||||||||||||| |||||||||||    
T  45714735 ctcaagttcgactcatttgatttatgaatcaagttcaacgaatcaattgtcgaatcgaat 45714794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 159
Target Start/End: Original strand, 44574494 - 44574612
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    |||||||||||||||  ||||| |||| ||| ||||||||  |||||||| | ||| | ||| ||||| |||||||||||  ||||||||||||| |||     
T  44574494 tcatgaaccaaacgagccgaactatatgtagctcaagttcggctcatttaataaacgaacttgatttttaactcaagttcagctcattaggttcacgaac 44574593  T
Q  141 caagttcaacgaatcaatt 159  Q
     ||||||||||||| ||||    
T  44574594 taagttcaacgaattaatt 44574612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 41 - 153
Target Start/End: Original strand, 50965371 - 50965484
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaa-ttttaaactcaagttcgactcattaggttcatgaa 139  Q
    |||||| |||| ||| ||||||||||| ||| ||||||||| |||||||||||||| | ||||| |||| | ||||| |||  |||||||||||||||||    
T  50965371 tcatgagccaatcgagtcgaaccatatatagctcaagttcagctcatttatttaacgaacttaatttttcagctcaaattcagctcattaggttcatgaa 50965470  T
Q  140 tcaagttcaacgaa 153  Q
     ||| || ||||||    
T  50965471 ccaaatttaacgaa 50965484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 41 - 153
Target Start/End: Original strand, 51068506 - 51068619
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaa-ttttaaactcaagttcgactcattaggttcatgaa 139  Q
    |||||| |||| ||| ||||||||||| ||| ||||||||| |||||||||||||| | ||||| |||| | ||||| |||  |||||||||||||||||    
T  51068506 tcatgagccaatcgagtcgaaccatatatagctcaagttcagctcatttatttaacgaacttaatttttcagctcaaattcagctcattaggttcatgaa 51068605  T
Q  140 tcaagttcaacgaa 153  Q
     ||| || ||||||    
T  51068606 ccaaatttaacgaa 51068619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 73 - 196
Target Start/End: Original strand, 31589622 - 31589745
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatc 172  Q
    ||||||||||| | |||||||||||| ||||||||| |||||||||| |||| ||| |||| ||||| ||||| ||| ||||  |||| |||||| |||     
T  31589622 tcaagttcaacccgtttatttaacaaacttaattttcaactcaagtttgacttatttggtttatgaaccaagtccaatgaattgattaccgaatcaaatt 31589721  T
Q  173 tcgcactattttcgaattggttcg 196  Q
    | | | |||||| || ||||||||    
T  31589722 ttgaattattttggagttggttcg 31589745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 167
Target Start/End: Original strand, 28242551 - 28242677
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||||| ||| |||||| ||||  || |||||||||  ||||||||||||| |  |||||||| | ||||| |||  |||||| ||||||||||     
T  28242551 tcatgaaccaaccgagtcgaactatatacagctcaagttcagatcatttatttaacgaatttaattttcagctcaaattcagctcatttggttcatgaac 28242650  T
Q  141 caagttcaacgaatcaattatcgaatc 167  Q
    ||| |||||||| | |||| |||||||    
T  28242651 caaattcaacgagttaattgtcgaatc 28242677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 25253712 - 25253779
Alignment:
Q  83 ctcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaac 150  Q
    |||||||||||||| | ||||||||| | |||||||||  |||||| |||||||||| ||||||||||    
T  25253712 ctcatttatttaacgaacttaatttttagctcaagttcagctcatttggttcatgaaccaagttcaac 25253779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 19560947 - 19560785
Alignment:
Q  40 ttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaa 139  Q
    ||||||||| || ||| || ||| |||| ||  ||||||||  ||||||||||||||   ||||| | | |||||||||||  ||  ||  |||||||||    
T  19560947 ttcatgaacaaatcgagtcaaactatatataactcaagttcggctcatttatttaacggacttaactcttaactcaagttcagcttgtttcgttcatgaa 19560848  T
Q  140 tcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
     |||||||||||||| |||| |||| ||||||  || ||||| ||||| |||||||| |||||    
T  19560847 ccaagttcaacgaattaattgtcgagtcgaattccgaactatattcgagttggttcggttcat 19560785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 150
Target Start/End: Original strand, 1674629 - 1674706
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaac 150  Q
    ||||||||| || ||||||||||||  |  |||||| | || |||||| ||||||| |||||||||| ||||||||||    
T  1674629 tcaagttcagcttatttatttaacatacaaaattttcagcttaagttcaactcatttggttcatgaaccaagttcaac 1674706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 202
Target Start/End: Complemental strand, 23206463 - 23206319
Alignment:
Q  57 tcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatca 156  Q
    |||||| |||| ||| | ||||||| |||||||| |||| || ||||||||| | ||||||| |  ||| |||||||||||||  |||||||||  || |    
T  23206463 tcgaactatatgtagcttaagttcagctcatttaattaagaa-cttaattttcagctcaagtccagctcgttaggttcatgaacaaagttcaacagatta 23206365  T
Q  157 attatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    | |||| | |||||| ||| |||||  |||| |||||||| |||||    
T  23206364 aatatcaagtcgaatgtcgaactataatcgagttggttcggttcat 23206319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 29536598 - 29536643
Alignment:
Q  74 caagttcaactcatttatttaacaagcttaattttaaactcaagtt 119  Q
    ||||||||||| ||||||||||| || |||||||| ||||||||||    
T  29536598 caagttcaacttatttatttaacgagtttaattttcaactcaagtt 29536643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 169
Target Start/End: Complemental strand, 1072881 - 1072753
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||| |||||||||  ||||| |||| ||  |||||||||  |||||   ||||||| |||||||||   |||||  || ||||||| ||||||||||     
T  1072881 tcatggaccaaacgaggcgaactatatataactcaagttcagttcattatattaacaaacttaattttcggctcaaactcaactcatttggttcatgaac 1072782  T
Q  141 caagttcaacgaatcaattatcgaatcga 169  Q
      ||| |||||||||||||||||| ||||    
T  1072781 ttagtccaacgaatcaattatcgagtcga 1072753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 53529759 - 53529683
Alignment:
Q  44 tgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttc 120  Q
    |||||||||||| |||||| | || ||||||||||||| |||| ||| || || | ||||||||| | |||||||||    
T  53529759 tgaaccaaacgagtcgaacaacatatagttcaagttcagctcaattagttgacgaacttaattttcagctcaagttc 53529683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 2e-48; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 37 - 202
Target Start/End: Complemental strand, 3081894 - 3081729
Alignment:
Q  37 tggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcat 136  Q
    ||||||||||||||||||| |||||| ||| |||||||||||||| |||||||| ||||| ||||||||||| ||||||||||||||||||| ||||| |    
T  3081894 tggttcatgaaccaaacgagtcgaactatacttagttcaagttcagctcatttaattaacgagcttaattttcaactcaagttcgactcatttggttcgt 3081795  T
Q  137 gaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||| ||||||||||||| ||||||||||||||| | ||| |||||||||||  ||||||| |||||    
T  3081794 gaaccaagttcaacgaaccaattatcgaatcgagtatcgaactattttcgagctggttcggttcat 3081729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 35 - 202
Target Start/End: Original strand, 13311984 - 13312153
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    ||||||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||| |||||    
T  13311984 gctggttcatgaaccaaacgagttgaaccatactaagttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttc 13312083  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcga--atctcgcactattttcgaattggttcgtttcat 202  Q
    ||||| ||||| ||| ||| |||||||||||||||  || ||| ||||||||||| |||||||| |||||    
T  13312084 atgaaccaagtccaatgaaccaattatcgaatcgagtatatcgaactattttcgagttggttcggttcat 13312153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 37 - 202
Target Start/End: Original strand, 7437268 - 7437433
Alignment:
Q  37 tggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcat 136  Q
    ||||||||||||||||||| |||||| ||| |||||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||||| ||||| |    
T  7437268 tggttcatgaaccaaacgagtcgaactatacttagttcaagttcagctcatttatttaacgagcttaattttcaactaaagttcgactcatttggttcgt 7437367  T
Q  137 gaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||| ||||||||||||| | ||||||||||||| | ||| ||||||||||| || ||||| |||||    
T  7437368 gaaccaagttcaacgaacccattatcgaatcgagtatcgaactattttcgagttagttcggttcat 7437433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 37 - 194
Target Start/End: Original strand, 18099780 - 18099937
Alignment:
Q  37 tggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcat 136  Q
    ||||||||||||||||||| | |||| ||   ||| ||||||||| |||||||||||||| | ||||||| | ||||||| ||||||||||| ||||| |    
T  18099780 tggttcatgaaccaaacgaattgaactatgcatagctcaagttcatctcatttatttaacgaacttaattgttaactcaaattcgactcatttggttcgt 18099879  T
Q  137 gaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggtt 194  Q
    ||| ||||||||||||||| ||||||||||||| ||||  ||| ||||||| ||||||    
T  18099880 gaaccaagttcaacgaatccattatcgaatcgagtctcaaacttttttcgagttggtt 18099937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 44 - 171
Target Start/End: Complemental strand, 5640421 - 5640294
Alignment:
Q  44 tgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaa 143  Q
    |||||||||||| |||||| |||| ||||||||||||| |||| ||| || || | ||||||||| |  ||||||||| |||||| |||||||||| |||    
T  5640421 tgaaccaaacgagtcgaactatatatagttcaagttcagctcaattagttgacgaacttaattttcagttcaagttcggctcatttggttcatgaaccaa 5640322  T
Q  144 gttcaacgaatcaattatcgaatcgaat 171  Q
    |||| |||||||||||||||||||||||    
T  5640321 gttcgacgaatcaattatcgaatcgaat 5640294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 41 - 202
Target Start/End: Complemental strand, 4441473 - 4441312
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||||| ||| |||||| ||||  |||||||||||| |||||||||||||| | ||||||||| |||||||||||  ||||||  |||| ||||     
T  4441473 tcatgaaccaaccgaatcgaactatatacagttcaagttcagctcatttatttaacgaacttaattttcaactcaagttcagctcatttagttcgtgaac 4441374  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||||||   |||| ||||||||| | ||| |||||| |||| |||||||| |||||    
T  4441373 caagttcaacgagctaattgtcgaatcgagtttcgaactattgtcgagttggttcggttcat 4441312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 73 - 174
Target Start/End: Original strand, 18095519 - 18095620
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatc 172  Q
    ||||||||| |||||||||||||| | ||||||||| ||||||||||||||| ||| ||||| |||| ||||||||||||||| ||||||||||||| ||    
T  18095519 tcaagttcatctcatttatttaacgaacttaatttttaactcaagttcgacttatttggttcgtgaaccaagttcaacgaatccattatcgaatcgagtc 18095618  T
Q  173 tc 174  Q
    ||    
T  18095619 tc 18095620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 41 - 196
Target Start/End: Original strand, 6999235 - 6999390
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||||| ||| |||||| ||||  ||||||||||||  |||||| |||||||| ||||||||| | |||||||||  ||||||  |||||| ||     
T  6999235 tcatgaaccaaccgagtcgaactatataaagttcaagttcagttcatttgtttaacaaacttaattttcagctcaagttcagctcatttagttcattaac 6999334  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcg 196  Q
    |||||||||||||| |||||||||||||| ||||  |||||| |||| ||| ||||    
T  6999335 caagttcaacgaattaattatcgaatcgagtctcaaactattgtcgagttgcttcg 6999390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 44 - 167
Target Start/End: Complemental strand, 10961965 - 10961842
Alignment:
Q  44 tgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaa 143  Q
    |||||||||||| |||||| | || ||||||||||||| |||| ||| || || | ||||||||| | ||||| ||||||||||| |||||||||| |||    
T  10961965 tgaaccaaacgagtcgaactacatatagttcaagttcagctcaattagttgacgaacttaattttcagctcaaattcgactcatttggttcatgaaccaa 10961866  T
Q  144 gttcaacgaatcaattatcgaatc 167  Q
    |||||||||||||||| |||||||    
T  10961865 gttcaacgaatcaattgtcgaatc 10961842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 83 - 202
Target Start/End: Original strand, 17441168 - 17441287
Alignment:
Q  83 ctcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactatt 182  Q
    ||||||||||| || ||||||||||| ||||||||||| ||||||| ||||||||||  ||||||||||||| ||||| | |||||| | ||| ||||||    
T  17441168 ctcatttatttgacgagcttaattttcaactcaagttcaactcatttggttcatgaactaagttcaacgaattaattaccaaatcgagtttcgaactatt 17441267  T
Q  183 ttcgaattggttcgtttcat 202  Q
    ||||  |||||||| |||||    
T  17441268 ttcgggttggttcggttcat 17441287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 166
Target Start/End: Complemental strand, 27985059 - 27984937
Alignment:
Q  44 tgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaa 143  Q
    ||||| |||||| |||||| | || ||||||||||||| |||| ||| || |||| ||||||||| |  ||||||||| |||||| ||||||| || |||    
T  27985059 tgaactaaacgagtcgaactacatctagttcaagttcagctcaattagtttacaaacttaattttcagttcaagttcggctcatttggttcataaaccaa 27984960  T
Q  144 gttcaacgaatcaattatcgaat 166  Q
    |||| ||||||||||| ||||||    
T  27984959 gttcgacgaatcaattgtcgaat 27984937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 44 - 167
Target Start/End: Complemental strand, 9950929 - 9950806
Alignment:
Q  44 tgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaa 143  Q
    |||||||||||| | |||| | || ||| ||||||||| |||| ||| || || | ||||||||| |||||||||||| |||||| |||||||||| |||    
T  9950929 tgaaccaaacgagttgaactacatatagctcaagttcagctcaattagttgacgaacttaattttcaactcaagttcggctcatttggttcatgaaccaa 9950830  T
Q  144 gttcaacgaatcaattatcgaatc 167  Q
    |||| | |||||| || |||||||    
T  9950829 gttcgatgaatcatttgtcgaatc 9950806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 41 - 169
Target Start/End: Complemental strand, 11460178 - 11460058
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    |||| |||||| ||| |||||| ||||| |  ||||||||| |||||||||||||||| ||||||| | | |||||        |||| ||||||||||     
T  11460178 tcataaaccaaccgagtcgaactatattcaactcaagttcagctcatttatttaacaaacttaattctcagctcaa--------catttggttcatgaac 11460087  T
Q  141 caagttcaacgaatcaattatcgaatcga 169  Q
    |||||||||||||||||||||||||||||    
T  11460086 caagttcaacgaatcaattatcgaatcga 11460058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 153
Target Start/End: Original strand, 33110424 - 33110538
Alignment:
Q  39 gttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatga 138  Q
    |||| |||||||||||| |||||| |||| ||  |||||||| ||||||||| ||||| | |||||| || | || ||||||| ||| || |||||||||    
T  33110424 gttcgtgaaccaaacgagtcgaactatatataactcaagttcgactcatttagttaacgaacttaatctttagcttaagttcggctcgtttggttcatga 33110523  T
Q  139 atcaagttcaacgaa 153  Q
    | |||||||||||||    
T  33110524 accaagttcaacgaa 33110538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 1501816 - 1501977
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||||| ||| |||||| ||||  || | |||||   |||||||||||||| | ||||||||| | ||||||||||  ||||| ||||||||||     
T  1501816 tcatgaaccaaccgagtcgaactatatacagcttaagtttggctcatttatttaacgaacttaattttcagctcaagttcggttcatttggttcatgaac 1501915  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
     ||||||||||| | |||| || |||||| | ||| || ||| |||| |||||||| |||||    
T  1501916 gaagttcaacgagttaattgtcaaatcgagtttcgaacaattgtcgagttggttcggttcat 1501977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 10346689 - 10346799
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||  ||||| |||||| |||| ||  ||||||||| |||||||| ||||| | ||||||||| | ||||||| |  ||| |||||||||||||     
T  10346689 tcatgaacttaacgagtcgaactatatgtaactcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 10346788  T
Q  141 caagttcaacg 151  Q
    |||||||||||    
T  10346789 caagttcaacg 10346799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 194
Target Start/End: Original strand, 8200610 - 8200752
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| |||||| |||| ||| |||||||||||||||||| ||||| | ||||||||| | |||            ||||||||||||||    
T  8200610 tcatgaacctaacgagtcgaactatatgtagctcaagttcaactcatttaattaacgaacttaattttcagctcg-----------ttaggttcatgaat 8200698  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggtt 194  Q
    ||||||||||| || || |||||| |||||| ||| |||||  |||| ||||||    
T  8200699 caagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggtt 8200752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 167
Target Start/End: Original strand, 32163541 - 32163635
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatc 167  Q
    ||||||| | |||||||| ||||| | ||||||||| ||||||||||   ||||||||||||||||| || ||||||| | | |||| |||||||    
T  32163541 tcaagttaagctcatttagttaacgaacttaattttcaactcaagtttagctcattaggttcatgaaccatgttcaaccagttaattgtcgaatc 32163635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 22295882 - 22295989
Alignment:
Q  39 gttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatga 138  Q
    |||||||||||||| || | |||| |||| ||  |||| |||||| |||||| ||||| | |||||| || | |||||||||| ||| || |||||||||    
T  22295882 gttcatgaaccaaaagagttgaactatatataactcaaattcaacacatttacttaacgaacttaatctttagctcaagttcggctcgtttggttcatga 22295981  T
Q  139 atcaagtt 146  Q
    | ||||||    
T  22295982 accaagtt 22295989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 187
Target Start/End: Complemental strand, 21093384 - 21093270
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatc 172  Q
    ||||||| |||||| || |||||| || || ||||| ||||||||||||| ||||| | || | |||  ||||||||||||| ||| |  ||||||||||    
T  21093384 tcaagtttaactcagttgtttaacgagattgattttcaactcaagttcgagtcatttgatttacgaactaagttcaacgaattaatcaaagaatcgaatc 21093285  T
Q  173 tcgcactattttcga 187  Q
    ||  |||| ||||||    
T  21093284 tcaaactactttcga 21093270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 30774040 - 30774101
Alignment:
Q  75 aagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcat 136  Q
    ||||||| ||||||||||||||  ||||||| || ||||||| || |||||||| |||||||    
T  30774040 aagttcatctcatttatttaacgtgcttaatattcaactcaaatttgactcatttggttcat 30774101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 16799827 - 16799763
Alignment:
Q  110 aactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctc 174  Q
    |||||||||||  |||||| |||| || || ||| ||||||| |||||||||| |||||||||||    
T  16799827 aactcaagttcatctcatttggttgataaaccaaattcaacggatcaattatcaaatcgaatctc 16799763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 54 - 202
Target Start/End: Original strand, 21069 - 21216
Alignment:
Q  54 gattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaa 153  Q
    |||||||| |||| |||| |||||||||||||||||||||||  ||||||||||| |||||||||||||||| || |||||||||| |||||||||||||    
T  21069 gattcgaatcatacttagctcaagttcaactcatttatttaatgagcttaattttcaactcaagttcgactcttt-ggttcatgaaccaagttcaacgaa 21167  T
Q  154 tcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    |||||||||||||||| ||||| ||||||||||| |||||||| |||||    
T  21168 tcaattatcgaatcgagtctcgaactattttcgagttggttcggttcat 21216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 1e-43; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 37 - 202
Target Start/End: Original strand, 40458885 - 40459050
Alignment:
Q  37 tggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcat 136  Q
    ||||||||||||||||||| |||||| ||| |||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||| ||||| |    
T  40458885 tggttcatgaaccaaacgagtcgaactatacttagttcaagttcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgt 40458984  T
Q  137 gaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||| |||||||||| || ||||||| ||||||| | ||  ||||||||| | |||||||| |||||    
T  40458985 gaaccaagttcaacaaaccaattattgaatcgagtatcaaactattttcaagttggttcggttcat 40459050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 43 - 202
Target Start/End: Complemental strand, 11007142 - 11006985
Alignment:
Q  43 atgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatca 142  Q
    ||||||||||||| |||||  ||| ||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||| |||| ||    
T  11007142 atgaaccaaacgagtcgaattatacttatttcaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaacca 11007043  T
Q  143 agttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||||||||||||||| |||||   ||  ||||||||||| |||||||| |||||    
T  11007042 agttcaacgaatcaattatcggatcga--gtcaaactattttcgagttggttcggttcat 11006985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 46 - 169
Target Start/End: Original strand, 13829851 - 13829974
Alignment:
Q  46 aaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagt 145  Q
    |||||||||| |||||||||| | | ||||||||||||||||||| ||||| || |||||||| ||||||||||| ||||||| |||| ||||| |||||    
T  13829851 aaccaaacgagtcgaaccatactcaattcaagttcaactcatttaattaacgagtttaatttttaactcaagttcaactcatttggtttatgaaccaagt 13829950  T
Q  146 tcaacgaatcaattatcgaatcga 169  Q
    ||||||||||||||||||||||||    
T  13829951 tcaacgaatcaattatcgaatcga 13829974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 35 - 159
Target Start/End: Original strand, 1094419 - 1094543
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    |||||||||||| |||||||| |||||||||| | |  |||||||| ||||||||||| ||| ||||||||||| ||||||||||||||||||| |||||    
T  1094419 gctggttcatgatccaaacgagtcgaaccatactcaactcaagttcgactcatttattcaacgagcttaattttcaactcaagttcgactcatttggttc 1094518  T
Q  135 atgaatcaagttcaacgaatcaatt 159  Q
    ||||| ||| ||||| || ||||||    
T  1094519 atgaaccaaattcaatgagtcaatt 1094543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 202
Target Start/End: Complemental strand, 27464713 - 27464583
Alignment:
Q  72 ttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaat 171  Q
    ||||||| |||||| ||||||||   | ||||||||| || |||||||||||||||| |||||||||| ||| |||||| |||||||||||||||| | |    
T  27464713 ttcaagtccaactcctttatttagggaacttaattttcaattcaagttcgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcaagt 27464614  T
Q  172 ctcgcactattttcgaattggttcgtttcat 202  Q
    |||| ||||||||||| |||||||| |||||    
T  27464613 ctcgaactattttcgagttggttcggttcat 27464583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 42 - 171
Target Start/End: Complemental strand, 32713168 - 32713038
Alignment:
Q  42 catgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatc 141  Q
    |||||| ||||||| |||||||||| | |||| |||||||| | ||||||||||| ||||||||||| |||  | |||||||||||| ||||||||||||    
T  32713168 catgaatcaaacgagtcgaaccatactcagtttaagttcaaattatttatttaacgagcttaattttcaacatatgttcgactcatttggttcatgaatc 32713069  T
Q  142 aag-ttcaacgaatcaattatcgaatcgaat 171  Q
    ||| |||||||||||| ||||| ||| ||||    
T  32713068 aagtttcaacgaatcatttatcaaattgaat 32713038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 194
Target Start/End: Original strand, 10412408 - 10412561
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    |||||||||||| || ||| |  |||| ||| |||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||   ||| | |||     
T  10412408 tcatgaaccaaatgagtcggattatatatagctcaagtccaactcatttatttaacgagcttaatttttaactcaagttcgactcatctagtttacgaac 10412507  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggtt 194  Q
    | | || ||||||  ||||| |||||||||||||| ||||||||||| ||||||    
T  10412508 cgaatttaacgaactaattaccgaatcgaatctcgaactattttcgagttggtt 10412561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 44 - 171
Target Start/End: Complemental strand, 38409740 - 38409613
Alignment:
Q  44 tgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaa 143  Q
    ||||||||||||  ||||| |||| ||||| ||||||| |||| ||| || |||| ||||||||| | |||||||||| |||||| |||||||||| |||    
T  38409740 tgaaccaaacgagccgaactatatatagttaaagttcagctcaattagttcacaaacttaattttcagctcaagttcggctcatttggttcatgaaccaa 38409641  T
Q  144 gttcaacgaatcaattatcgaatcgaat 171  Q
     ||| ||||||||||| |||||||||||    
T  38409640 attcgacgaatcaattgtcgaatcgaat 38409613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 202
Target Start/End: Complemental strand, 3409360 - 3409199
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||| ||| ||| |||||| ||||  || |||| |||| |||||||||||||| | ||||||||| | |||||||||   ||||| ||||||||||     
T  3409360 tcatgaatcaatcgagtcgaactatatacagctcaaattcagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaac 3409261  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    |||||||||||| | |||| ||||||||| | ||| |||||| |||| |||||||| |||||    
T  3409260 caagttcaacgagttaattgtcgaatcgagtttcgaactattgtcgagttggttcggttcat 3409199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 202
Target Start/End: Original strand, 29806879 - 29807035
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttc 134  Q
    ||||||||||||||| ||||| ||||||||||   || ||||||||||||||||||||||||  | ||| |           ||||| |||||| |||||    
T  29806879 gctggttcatgaacctaacgagtcgaaccatacgaagctcaagttcaactcatttatttaacgggtttagt-----------gttcggctcatttggttc 29806967  T
Q  135 atgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
     | || ||||||||||||||||||||||||||||| ||| | |||||||||||||||||||| |||||    
T  29806968 gtaaaccaagttcaacgaatcaattatcgaatcgagtcttgaactattttcgaattggttcggttcat 29807035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 42 - 171
Target Start/End: Complemental strand, 34116344 - 34116215
Alignment:
Q  42 catgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatc 141  Q
    |||||||||||||| |||||| | || ||| ||||||||| |||| ||||||| | | ||||||||||| |||||||||| |||||| ||||||||||      
T  34116344 catgaaccaaacgagtcgaactacatatagctcaagttcagctcaattatttagcgaacttaattttaagctcaagttcggctcatttggttcatgaact 34116245  T
Q  142 aagttcaacgaatcaattatcgaatcgaat 171  Q
    |||||| || ||||||||||  ||||||||    
T  34116244 aagttcgacaaatcaattattaaatcgaat 34116215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 44 - 171
Target Start/End: Original strand, 11027879 - 11028006
Alignment:
Q  44 tgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaa 143  Q
    |||||||||||| |||||| | || ||| ||||||||| |||| ||| || || | ||||||||| |  ||||||||| |||||| |||||||||| |||    
T  11027879 tgaaccaaacgagtcgaactacatatagctcaagttcagctcaattagttgacgaacttaatttttagttcaagttcggctcatttggttcatgaaccaa 11027978  T
Q  144 gttcaacgaatcaattatcgaatcgaat 171  Q
    |||| |||||||||||||||||| ||||    
T  11027979 gttcgacgaatcaattatcgaattgaat 11028006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 26436322 - 26436452
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| |||||| |||| ||| ||||||||| |||||||| ||||| | ||||||||| | |||| ||||  ||| |||||||||||||     
T  26436322 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcacgttcagctcgttaggttcatgaac 26436421  T
Q  141 caagttcaacgaatcaattatcgaatcgaat 171  Q
    ||||||||||| || || |||||| ||||||    
T  26436422 caagttcaacggattaaatatcgagtcgaat 26436452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 44 - 153
Target Start/End: Complemental strand, 2647143 - 2647034
Alignment:
Q  44 tgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaa 143  Q
    |||||||||||| |||||| |||| ||  |||||||||||| ||||| ||||| | ||||||||| | |||||||||| ||| || |||||||||| |||    
T  2647143 tgaaccaaacgagtcgaactatatataactcaagttcaacttatttagttaacgaacttaatttttagctcaagttcggctcgtttggttcatgaaccaa 2647044  T
Q  144 gttcaacgaa 153  Q
    ||||||||||    
T  2647043 gttcaacgaa 2647034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 27634639 - 27634800
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| || ||| |||| ||| ||||||||| |||||||| ||||| | ||||||||| | ||||||| |  ||| |||||||||||||     
T  27634639 tcatgaacctaacgagtcaaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 27634738  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
     |||||||||| || || |||||| |||||| ||| |||||  |||| |||||||| |||||    
T  27634739 taagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcat 27634800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 46 - 171
Target Start/End: Original strand, 30713129 - 30713254
Alignment:
Q  46 aaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagt 145  Q
    |||||||||| ||||||   || ||| |||||||||||||| ||| || || | ||||| ||| | |||| ||||| |||||| |||||||||| |||||    
T  30713129 aaccaaacgagtcgaactgcatatagctcaagttcaactcaattagttgacgaacttaaatttcagctcatgttcggctcatttggttcatgaaccaagt 30713228  T
Q  146 tcaacgaatcaattatcgaatcgaat 171  Q
    || |||||||||||||||||||||||    
T  30713229 tcgacgaatcaattatcgaatcgaat 30713254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 33831463 - 33831624
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| |||||| |||| ||| ||||||||| |||||||| ||||| | ||||||||| | ||||||| |  ||| |||||||||||||     
T  33831463 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 33831562  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||| ||||||| || |  |||||| |||||| ||| |||||  |||| |||||||| |||||    
T  33831563 caaattcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcat 33831624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 41 - 194
Target Start/End: Original strand, 36538624 - 36538777
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| |||||| |||| ||| ||||||| | |||||||| ||||| | ||||||||| | ||||||| | |||| |||||||||||||     
T  36538624 tcatgaacctaacgagtcgaactatatgtagctcaagtttagctcatttaattaacgaacttaattttcagctcaagtccaactcgttaggttcatgaac 36538723  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggtt 194  Q
    ||||||||||| || |  |||||| |||||| ||| |||||  |||| ||||||    
T  36538724 caagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggtt 36538777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 2328467 - 2328335
Alignment:
Q  37 tggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcat 136  Q
    ||||||||||| || |||| |||||| |||| || |||||||||||||||||||||| |   | |||||||| |||||||||| ||||||||    ||||    
T  2328467 tggttcatgaatcacacgagtcgaactatatataattcaagttcaactcatttatttgaagggtttaattttcaactcaagtttgactcatttaaatcat 2328368  T
Q  137 gaatcaagttcaacgaatcaattatcgaatcga 169  Q
    |||| ||||| ||||||| ||||| ||||||||    
T  2328367 gaataaagtttaacgaattaattaccgaatcga 2328335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 188
Target Start/End: Complemental strand, 12070684 - 12070539
Alignment:
Q  43 atgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatca 142  Q
    ||||| ||||||| |||||| |||  ||||| ||||| |||| |||| |||||| |  |||||||| ||||||||||||| |||||  ||| | ||||||    
T  12070684 atgaagcaaacgagtcgaactatacatagtttaagtttaacttatttgtttaacgaatttaattttcaactcaagttcgattcatttagttgacgaatca 12070585  T
Q  143 agttcaacgaatcaattatcgaatcgaatctcgcactattttcgaa 188  Q
    | |||||||||| ||||| ||||| || ||||  ||||||||||||    
T  12070584 aattcaacgaattaattaccgaattgagtctcaaactattttcgaa 12070539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 202
Target Start/End: Complemental strand, 44740623 - 44740494
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatc 172  Q
    ||||||||| ||||||| |||||| | ||||||||| | |||||||||  ||| || |||||||||| |||||||||||| | |||| ||||||||| ||    
T  44740623 tcaagttcagctcatttgtttaacgaacttaatttttagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtc 44740524  T
Q  173 tcgcactattttcgaattggttcgtttcat 202  Q
     |  |||||| |||| |||||||| |||||    
T  44740523 ccaaactattgtcgagttggttcggttcat 44740494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 34064673 - 34064783
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| |||||| |||| ||| ||||||||| |||||||| ||||| | ||||||||| | ||||||| |  ||| |||||||||||||     
T  34064673 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 34064772  T
Q  141 caagttcaacg 151  Q
     ||||||||||    
T  34064773 taagttcaacg 34064783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 169
Target Start/End: Complemental strand, 27902607 - 27902483
Alignment:
Q  44 tgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaa 143  Q
    |||||||||||| |||||| | || ||| |||||||||||||| ||| || || |  |||||||| | ||||||||||  |||||  ||||||||| |||    
T  27902607 tgaaccaaacgagtcgaactacatatagctcaagttcaactcaattagttgacgat-ttaattttcagctcaagttcggttcattttgttcatgaaccaa 27902509  T
Q  144 gttcaacgaatcaattatcgaatcga 169  Q
    |||| ||||||||||| |||||||||    
T  27902508 gttcgacgaatcaattgtcgaatcga 27902483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 41959111 - 41959272
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    |||| |||| ||||| |||||| |||| ||| | | ||||| |||||||| ||||| | ||||||||| | ||||||| |  ||| ||||||||||||||    
T  41959111 tcattaacctaacgagtcgaactatatgtagcttatgttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaat 41959210  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||||| || |  |||||| |||||| ||| |||||  |||| ||| |||| |||||    
T  41959211 caagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttgattcggttcat 41959272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 31000880 - 31000951
Alignment:
Q  113 tcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactatttt 184  Q
    |||||||| | ||||| ||||||||||||||||||| ||||| ||||| |||||||||||||  ||||||||    
T  31000880 tcaagttcaaatcatttggttcatgaatcaagttcatcgaattaattaccgaatcgaatctcaaactatttt 31000951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 83 - 202
Target Start/End: Complemental strand, 33164110 - 33163991
Alignment:
Q  83 ctcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactatt 182  Q
    |||||||| ||||| | ||||||||| | ||||||| |  ||| ||||||||||||| ||||||||||| || |  |||||| |||||| ||| |||||     
T  33164110 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactata 33164011  T
Q  183 ttcgaattggttcgtttcat 202  Q
     ||||||||||||| |||||    
T  33164010 atcgaattggttcggttcat 33163991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 202
Target Start/End: Original strand, 17616294 - 17616396
Alignment:
Q  100 cttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgttt 199  Q
    ||||||||| | |||||||||| |||||| |||||||| ||||| ||||||||   |||| ||||||||| | ||  ||||||||||| |||||||| ||    
T  17616294 cttaatttttagctcaagttcggctcatttggttcatgtatcaaattcaacgagataattgtcgaatcgagtttctaactattttcgagttggttcgatt 17616393  T
Q  200 cat 202  Q
    |||    
T  17616394 cat 17616396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 150
Target Start/End: Original strand, 2578047 - 2578156
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||| ||| ||| |||| | |||| ||| | ||||| |||||||||||||||| |  |||||||| | |||||||||  |||||| | |||||||||    
T  2578047 tcatgaatcaaccgagtcgatcgatatatagcttaagtttaactcatttatttaacgaatttaattttcagctcaagttcagctcatttgattcatgaat 2578146  T
Q  141 caagttcaac 150  Q
    ||||||||||    
T  2578147 caagttcaac 2578156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 171
Target Start/End: Complemental strand, 20203825 - 20203756
Alignment:
Q  102 taattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaat 171  Q
    ||||||| | |||| ||| |||||||| |||||||||| ||||||||||||||||||| | |||||||||    
T  20203825 taattttcagctcaggtttgactcatttggttcatgaaccaagttcaacgaatcaattgttgaatcgaat 20203756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 196
Target Start/End: Complemental strand, 24844804 - 24844683
Alignment:
Q  75 aagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctc 174  Q
    ||||||| |||||||||||| | |  |||||||| | |||||||||  |||||| |||||||||| ||||||||||||   ||||  |||||||| | ||    
T  24844804 aagttcagctcatttatttatcgaatttaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacgagataattgccgaatcgagtttc 24844705  T
Q  175 gcactattttcgaattggttcg 196  Q
    | |||||| |||| ||||||||    
T  24844704 gaactattatcgagttggttcg 24844683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 194
Target Start/End: Original strand, 41332243 - 41332352
Alignment:
Q  85 catttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactatttt 184  Q
    |||||||||||||| ||||||||| | ||||| ||| ||||| | |||| ||||| |||||||||| | | |||| ||||||||| | ||| ||||| ||    
T  41332243 catttatttaacaaacttaattttcagctcaaattcaactcaattggtttatgaaccaagttcaacaagttaattgtcgaatcgagtttcgaactatatt 41332342  T
Q  185 cgaattggtt 194  Q
    ||| ||||||    
T  41332343 cgagttggtt 41332352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 17369125 - 17369074
Alignment:
Q  77 gttcaactcatttatttaacaagcttaattttaaactcaagttcgactcatt 128  Q
    |||||||||||||| |||||||  |||||||| |||||||||||||||||||    
T  17369125 gttcaactcatttacttaacaaatttaattttcaactcaagttcgactcatt 17369074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 174
Target Start/End: Original strand, 28968841 - 28968921
Alignment:
Q  94 aacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctc 174  Q
    ||||||||||||||| ||||||| || |||||||| |||||| |||   | |||||||| | |||||||||||||| ||||    
T  28968841 aacaagcttaattttcaactcaaatttgactcatttggttcacgaactgaattcaacgagttaattatcgaatcgagtctc 28968921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 202
Target Start/End: Original strand, 9753156 - 9753235
Alignment:
Q  123 ctcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    |||||| |||||||||| |||  | |||||||||||| ||||||||||||||| ||| | ||||| |||| ||| |||||    
T  9753156 ctcatttggttcatgaaccaaacttaacgaatcaattgtcgaatcgaatctcgaactttgttcgacttggctcggttcat 9753235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 202
Target Start/End: Original strand, 16544016 - 16544135
Alignment:
Q  83 ctcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactatt 182  Q
    |||||||||||||| | ||||||||| ||||||| ||| | | ||| ||||  |||| |||||||||| |||  ||||||||||||| ||| | ||| ||    
T  16544016 ctcatttatttaacgaacttaatttttaactcaaattcaaattatttggttggtgaaccaagttcaacaaatacattatcgaatcgagtcttgaactttt 16544115  T
Q  183 ttcgaattggttcgtttcat 202  Q
    | ||| ||| |||| |||||    
T  16544116 tccgagttgcttcggttcat 16544135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 119
Target Start/End: Original strand, 39690138 - 39690216
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagtt 119  Q
    ||||||||||||||| |||||| | || ||| |||||||||||||| ||| || || | ||||||||| | ||||||||    
T  39690138 tcatgaaccaaacgagtcgaactacatatagctcaagttcaactcaattagttgacgaacttaattttcagctcaagtt 39690216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 17503437 - 17503502
Alignment:
Q  87 tttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacga 152  Q
    |||| ||||||| ||||||||| ||||||| ||||| ||||| | || ||||| ||||||||||||    
T  17503437 tttagttaacaaacttaattttcaactcaaattcgattcatttgtttaatgaaccaagttcaacga 17503502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 18667721 - 18667774
Alignment:
Q  43 atgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaac 96  Q
    ||||||||||||| |||||| |||| ||  |||||||||||| |||||||||||    
T  18667721 atgaaccaaacgagtcgaactatatataactcaagttcaacttatttatttaac 18667774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 39 - 202
Target Start/End: Complemental strand, 32957 - 32796
Alignment:
Q  39 gttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatga 138  Q
    |||||||||||| |||| |||||||||| | ||||||||||||| ||||||||||||| ||||||||||  ||||||||||||||||||| |||   |||    
T  32957 gttcatgaaccagacgagtcgaaccatactaagttcaagttcaattcatttatttaacgagcttaatttacaactcaagttcgactcatttggt--gtga 32860  T
Q  139 atcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    | ||||||||||||| ||||| ||||||||| | ||| ||||||||||| |||||||| |||||    
T  32859 accaagttcaacgaaccaattgtcgaatcgagtatcgaactattttcgagttggttcggttcat 32796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 72 - 187
Target Start/End: Complemental strand, 51443 - 51328
Alignment:
Q  72 ttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaat 171  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||| |||  ||||||||||||| | ||| |||| |||||    
T  51443 ttcaagttcaactcatttatttaacaagcttaattttaaaatcacgttcgactcatttggttcacgaactaagttcaacgaattatttaccgaaccgaat 51344  T
Q  172 ctcgcactattttcga 187  Q
    |||| |||||||||||    
T  51343 ctcgaactattttcga 51328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 184
Target Start/End: Original strand, 1091727 - 1091838
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatc 172  Q
    ||||||||||||||||| ||| || | |||||||||||||||| ||||||||| || ||||||||||||||||||||||||| |||||||||||||| ||    
T  1091727 tcaagttcaactcatttgtttgacgaacttaattttaaactcaggttcgactcgtttggttcatgaatcaagttcaacgaattaattatcgaatcgagtc 1091826  T
Q  173 tcgcactatttt 184  Q
    ||  ||||||||    
T  1091827 tcaaactatttt 1091838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 37 - 192
Target Start/End: Original strand, 22563970 - 22564125
Alignment:
Q  37 tggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcat 136  Q
    ||||||||||||||||||| |||||  |||| ||||||||||||   ||||| |||| || ||||||||||| ||||||||||||| | ||| |||||||    
T  22563970 tggttcatgaaccaaacgagtcgaattatatgtagttcaagttcggttcattcatttgacgagcttaattttcaactcaagttcgatttatttggttcat 22564069  T
Q  137 gaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattgg 192  Q
    ||| ||||||||||||| |||||| |||||| ||| ||  | ||||||||| ||||    
T  22564070 gaaccaagttcaacgaaacaattaccgaatcaaatttcaaattattttcgagttgg 22564125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 453451 - 453612
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| |||||| |||| ||| |||||||||||||||||| ||||| | ||||||||| ||||||||| |  ||| |||||||||||||     
T  453451 tcatgaacctaacgagtcgaactatatgtagctcaagttcaactcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaac 453550  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||||| || |  |||||| |||||| ||| |||||  |||| |||||||| |||||    
T  453551 caagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcat 453612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 112 - 202
Target Start/End: Original strand, 43384833 - 43384923
Alignment:
Q  112 ctcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||| ||||||| |||||||||| ||| |||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  43384833 ctcaagttcaactcatttggttcatgaaccaacttcaacgaattaattatcgaatcgaatctcgaactattttcgagttggttcggttcat 43384923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 73 - 167
Target Start/End: Complemental strand, 27189222 - 27189128
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatc 167  Q
    |||||||||||||| ||| || || | ||||||||| | ||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||    
T  27189222 tcaagttcaactcaattagttgacgaacttaattttcagctcaagttcgactcatttggttcatgaaccaagttcgacgaatcaattatcgaatc 27189128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 41 - 181
Target Start/End: Original strand, 11161540 - 11161680
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| |||||| |||| ||| ||||||||| |||||||| ||||| | ||||||||| | ||||||| |  ||| |||||||||||||     
T  11161540 tcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 11161639  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactat 181  Q
    ||||||||||| || || |||||| |||||| ||| |||||    
T  11161640 caagttcaacggattaaatatcgagtcgaatgtcgaactat 11161680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 44 - 167
Target Start/End: Complemental strand, 33280146 - 33280023
Alignment:
Q  44 tgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaa 143  Q
    |||||||||||| || ||| | || ||||||||||||| |||| ||| || || | ||||||||||| ||||  |||| |||||| |||||||||| |||    
T  33280146 tgaaccaaacgagtctaactacatatagttcaagttcagctcaattagttgacgaacttaattttaagctcatattcggctcatttggttcatgaaccaa 33280047  T
Q  144 gttcaacgaatcaattatcgaatc 167  Q
    |||| |||||||||||||||||||    
T  33280046 gttcgacgaatcaattatcgaatc 33280023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 44 - 171
Target Start/End: Original strand, 34516109 - 34516236
Alignment:
Q  44 tgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaa 143  Q
    |||||||||||| |||||| | || ||||||||||||| |||| ||| |  || | ||||||||| | |||||||||| |||||| |||| |||||||||    
T  34516109 tgaaccaaacgagtcgaactacatatagttcaagttcagctcaattaatcgacgaacttaattttcagctcaagttcggctcatttggttgatgaatcaa 34516208  T
Q  144 gttcaacgaatcaattatcgaatcgaat 171  Q
    |||||| ||||||||| |||||| ||||    
T  34516209 gttcaatgaatcaattgtcgaattgaat 34516236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 202
Target Start/End: Original strand, 12378391 - 12378481
Alignment:
Q  112 ctcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||| ||||||||| |||||||| || || ||||| |||||    
T  12378391 ctcaagttcaactcatttggttcgtgaaccaagttcaacgaatcaattatcgaaccgaatctcggactatttttgagtttgttcggttcat 12378481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 150
Target Start/End: Original strand, 34655001 - 34655112
Alignment:
Q  39 gttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatga 138  Q
    |||| |||||||||||| |||||| |||| ||  ||||||| |||||||||| ||||||| |||||| || | |||||||||||||| || |||||||||    
T  34655001 gttcgtgaaccaaacgagtcgaactatatataactcaagtttaactcatttagttaacaaacttaatctttagctcaagttcgactcgtttggttcatga 34655100  T
Q  139 atcaagttcaac 150  Q
    |  |||||||||    
T  34655101 actaagttcaac 34655112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 153
Target Start/End: Original strand, 43967476 - 43967590
Alignment:
Q  39 gttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatga 138  Q
    |||| |||||||||||| |||||| |||| ||  |||||||||||||||||| ||||| | |||||| || | |||||||||| ||| || |||||||||    
T  43967476 gttcgtgaaccaaacgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatga 43967575  T
Q  139 atcaagttcaacgaa 153  Q
    | ||| |||||||||    
T  43967576 accaaattcaacgaa 43967590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 3307902 - 3308063
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    |||| |||||| ||| |||||| ||||  || ||||||||  |||||||||||||| | |||||||||   |||||||||| |||||| ||||||||||     
T  3307902 tcataaaccaatcgagtcgaactatatacagctcaagttcggctcatttatttaacgaacttaattttctgctcaagttcggctcatttggttcatgaac 3308001  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
     |||||| |||| | |||| ||||||||| |  || |||||| |||| |||||||| |||||    
T  3308002 taagttctacgagttaattgtcgaatcgagttccgaactattgtcgagttggttcggttcat 3308063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 113 - 202
Target Start/End: Original strand, 39478090 - 39478179
Alignment:
Q  113 tcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    |||||||| ||||||| |||||||||| ||||| ||| ||| ||||||||||||||| | ||| ||||||||||| |||||||| |||||    
T  39478090 tcaagttcaactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcat 39478179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 169
Target Start/End: Original strand, 23181132 - 23181251
Alignment:
Q  50 aaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaa 149  Q
    |||||| |||||| | || ||||||||||||| |||| ||| || || | ||||||||| |  ||||||||| |||||| |||||||||| ||| ||| |    
T  23181132 aaacgagtcgaactacatctagttcaagttcagctcaattagtttacgaacttaattttcagttcaagttcggctcatttggttcatgaaccaaattcga 23181231  T
Q  150 cgaatcaattatcgaatcga 169  Q
    |||||||||| |||||||||    
T  23181232 cgaatcaattgtcgaatcga 23181251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 152
Target Start/End: Complemental strand, 9412664 - 9412585
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacga 152  Q
    |||| |||| ||||||||| |||| |  |||||| | |||||||||||  |||||| |||||||||| ||||||||||||    
T  9412664 tcaaattcagctcatttatgtaacgaatttaattctcaactcaagttcagctcatttggttcatgaaccaagttcaacga 9412585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 39478052 - 39478106
Alignment:
Q  35 gctggttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcattt 89  Q
    |||| |||||||| ||||||| ||||||||||   ||||||||||||||||||||    
T  39478052 gctgtttcatgaatcaaacgagtcgaaccataccaagttcaagttcaactcattt 39478106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 39 - 155
Target Start/End: Complemental strand, 941 - 825
Alignment:
Q  39 gttcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatga 138  Q
    |||||||||||| |||| |||||  ||| |||| |||||||||||||||||||||||| ||||||||||| ||| ||| ||| ||||||| |||||||||    
T  941 gttcatgaaccagacgagtcgaattatacttagctcaagttcaactcatttatttaacgagcttaattttcaacccaaattcaactcatttggttcatga 842  T
Q  139 atcaagttcaacgaatc 155  Q
    | |||||||||||||||    
T  841 accaagttcaacgaatc 825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 7480 - 7350
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||||||||| |||| | |||| | ||||||||||| |||| ||| ||| | | ||||||||| | |||||||||| |||||| ||||||||||     
T  7480 tcatgaaccaaacgagtcgacctatatatggttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcatgaac 7381  T
Q  141 caagttcaacgaatcaattatcgaatcgaat 171  Q
    ||||||| |||||||||||||||||||||||    
T  7380 caagttcgacgaatcaattatcgaatcgaat 7350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 73 - 187
Target Start/End: Original strand, 96280 - 96394
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatc 172  Q
    |||||||||||||||||||||||| ||||||||||| |||| ||||| |||||||| |||||| |||| |||||||| |||| | ||| |||| ||||||    
T  96280 tcaagttcaactcatttatttaacgagcttaattttgaacttaagttggactcatttggttcacgaattaagttcaatgaattatttaacgaaccgaatc 96379  T
Q  173 tcgcactattttcga 187  Q
    ||| |||||||||||    
T  96380 tcgaactattttcga 96394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 202
Target Start/End: Complemental strand, 124653 - 124492
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||||||||| |||||  || | |||||||| |||| |||||||| ||||||| ||||||  | | ||||||||||||||||| ||||||||||     
T  124653 tcatgaaccaaacgaatcgaaatatctatagttcaaattcagctcatttaattaacaaacttaataatcagctcaagttcgactcatttggttcatgaac 124554  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||| | | ||||| |||| || ||| ||| ||||| ||||| |||||||| |||||    
T  124553 caagttcaatggaccaattgtcgagtcaaatttcgaactatattcgagttggttcggttcat 124492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 43 - 202
Target Start/End: Original strand, 11439 - 11598
Alignment:
Q  43 atgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatca 142  Q
    ||||||||||||| |||||  |||| |||||||| |||| |||||||| ||||| | ||||||||| | || ||||||| |||||| |||  ||||||||    
T  11439 atgaaccaaacgagtcgaattatatatagttcaaattcagctcatttaattaacgaacttaattttcatctgaagttcggctcatttggtatatgaatca 11538  T
Q  143 agttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    |||||||||||| ||||||||| || ||| |   ||||| ||||| |||||||| |||||    
T  11539 agttcaacgaattaattatcgagtcaaattttaaactatgttcgagttggttcggttcat 11598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 83 - 202
Target Start/End: Original strand, 14436 - 14555
Alignment:
Q  83 ctcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactatt 182  Q
    ||||||||||| || |||||||||||  |||||||||| | ||||| |||||||||| ||||||||| |||||||||| |||||||| | ||| ||||||    
T  14436 ctcatttatttgacgagcttaattttcgactcaagttcaaatcatttggttcatgaaccaagttcaatgaatcaattaccgaatcgagtttcgaactatt 14535  T
Q  183 ttcgaattggttcgtttcat 202  Q
    ||||  |||||||| |||||    
T  14536 ttcgggttggttcggttcat 14555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 44 - 171
Target Start/End: Complemental strand, 26790 - 26663
Alignment:
Q  44 tgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaa 143  Q
    |||||||||||| |||||| | || ||| | ||||||| |||| ||| || || | ||||||||| | ||||||||||||||||| | |||||||| |||    
T  26790 tgaaccaaacgagtcgaactacatatagcttaagttcagctcaattagttgacgaacttaattttcagctcaagttcgactcatttgattcatgaaccaa 26691  T
Q  144 gttcaacgaatcaattatcgaatcgaat 171  Q
    ||||||| ||||| || |||||||||||    
T  26690 gttcaacaaatcagttgtcgaatcgaat 26663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 324 - 243
Alignment:
Q  73 tcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaat 154  Q
    |||||||||||||||||| ||||| | ||||||| | |||||||||||| || |||||||||||||| ||||| ||||||||    
T  324 tcaagttcaactcatttaattaacgaacttaattcttaactcaagttcggctaattaggttcatgaaccaagtccaacgaat 243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 19264 - 19425
Alignment:
Q  41 tcatgaaccaaacgattcgaaccatatttagttcaagttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaat 140  Q
    ||||||||| ||||| |||||  |||| ||| ||||||||| |||||||| ||||| | ||||||||| | ||||||| |  ||| |||||||||||||     
T  19264 tcatgaacctaacgagtcgaattatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 19363  T
Q  141 caagttcaacgaatcaattatcgaatcgaatctcgcactattttcgaattggttcgtttcat 202  Q
    ||||||||| | || |  |||||| |||||| ||| |||||  |||| |||||||| |||||    
T  19364 caagttcaaaggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcat 19425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 17238 - 17311
Alignment:
Q  76 agttcaactcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaa 149  Q
    ||||||||||||||||||||| ||||||||||| || ||||| |||||||||| |||||| |||| ||||||||    
T  17238 agttcaactcatttatttaacgagcttaattttgaattcaagctcgactcatttggttcacgaattaagttcaa 17311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 202
Target Start/End: Original strand, 11400 - 11519
Alignment:
Q  83 ctcatttatttaacaagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctcgcactatt 182  Q
    |||||||||||||| | ||||||||| |||| ||||||  |||||| ||||||||||  |||||| ||||   |||| ||||||||| |  |  ||||||    
T  11400 ctcatttatttaacgaacttaatttttaacttaagttcacctcatttggttcatgaactaagttcgacgaggtaattgtcgaatcgagttccaaactatt 11499  T
Q  183 ttcgaattggttcgtttcat 202  Q
     |||| |||||||| |||||    
T  11500 atcgagttggttcggttcat 11519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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