View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7182_low_1 (Length: 916)
Name: NF7182_low_1
Description: NF7182
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7182_low_1 |
 | |
|
| [»] scaffold0144 (1 HSPs) |
| | |
|
| [»] scaffold0133 (3 HSPs) |
| | |
|
| [»] scaffold0256 (3 HSPs) |
| | |
|
| [»] scaffold0230 (1 HSPs) |
| | |
|
| [»] scaffold0511 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 751; Significance: 0; HSPs: 15)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 751; E-Value: 0
Query Start/End: Original strand, 19 - 885
Target Start/End: Complemental strand, 16658384 - 16657518
Alignment:
| Q |
19 |
gaaagggtaaaaacacattttgacttgaaaatatgggtgtgtgtttcggatgatttcagtttgatgaaaattttagagtccatcctagaaaacaccattg |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
16658384 |
gaaagggtaaaaacacattttgacttgaaaatatgggtgtgtgtttcggatgatttcagtttactgaaaattttagagtccatcatagaaaacaccattg |
16658285 |
T |
|
| Q |
119 |
gaaaaaacctagatctcttgtctttagagtcaaggnnnnnnnnggttcaagatattttgcaaaacaaaaggtatttgcttgttcttgatgatgtttggag |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16658284 |
gaaaaaacctagatctcttgtctttagagtcaaggaaaaaaaaggttcaagatattttgcaaaacaaaaggtatttgcttgttcttgatgatgtttggag |
16658185 |
T |
|
| Q |
219 |
tgaagaccaagagaaatggaataagttaaagtctttgttgcaacttggaaagaaaggtgcatcaattttggtcactaccagacttgagattgttgcatcc |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16658184 |
tgaagaccaagagaaatggaataagttaaagtctttgttgcaacttggaaagaaaggtgcatcaattttggtcactaccagacttgagattgttgcatcc |
16658085 |
T |
|
| Q |
319 |
atcatgggaactaaggttcatcctttagcacagttatttgatgatgacatctggtctttgttcaaacaacatgcttttggagcaaatagagaagggcgtg |
418 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16658084 |
atcatgggaactaaggttcatcctttagcacagttatctgatgatgacatctggtcgttgttcaaacaacatgcttttggagcaaatagagaagggcgtg |
16657985 |
T |
|
| Q |
419 |
cagagcttgtggaaataggccaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggaagccttttgcgctttaaaagcgatga |
518 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
16657984 |
cagatcttgtggaaataggccaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggaagccttttacgctttaaaagcgatga |
16657885 |
T |
|
| Q |
519 |
acatcaatggatttctgtggtggaaagtgagttttggaatttagctgatgataaccatgtcatgtctgctttgagattgagctactttaacttgaaattg |
618 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
16657884 |
acatcaatggatttctgtggtggaaagtgagttttggaatttagctgatgataaccatgtcatgtctgctttgagactgagctactttaacttgaaattg |
16657785 |
T |
|
| Q |
619 |
tcattgaggccatgttttactttttgtgctgtttttcctaaggatttagaaatggataaggaagaactcattcaactttggatggctaatggacttgttg |
718 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
16657784 |
tcattgaggccatgttttactttttgtgctgtttttcctaaggattttgaaatggataaggaagaactcattaaactttggatggctaatggacttgtta |
16657685 |
T |
|
| Q |
719 |
catctagaggaaacttacagatggagcatgttggtaatgaggtatggaatgaattataccaaaggtcattttttcaagaagttaaatcagattttgttgg |
818 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| || || |
|
|
| T |
16657684 |
tatctagaggaaacttacagatggagcatgttggtaatgaggtatggaatgaattatatcaaaggtcattttttcaagaagtcgaatcagatttagtagg |
16657585 |
T |
|
| Q |
819 |
taacattacattcaaaattcatgattttatccatgatttaggtcagtcttttatgggagaagaatgt |
885 |
Q |
| |
|
|||||||||||| ||||| |||||||| |||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
16657584 |
taacattacatttaaaatgcatgatttagtccatgatttagctcagtctattatgggagaagaatgt |
16657518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 690; E-Value: 0
Query Start/End: Original strand, 19 - 887
Target Start/End: Original strand, 16867791 - 16868657
Alignment:
| Q |
19 |
gaaagggtaaaaacacattttgacttgaaaatatgggtgtgtgtttcggatgatttcagtttgatgaaaattttagagtccatcctagaaaacaccattg |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
16867791 |
gaaagggtaaaaacacattttgacttgaaaatatgggtgtgt--ttcggacgatttcagtttgatgaaaattttagagtccatcacagaaaacaccattg |
16867888 |
T |
|
| Q |
119 |
gaaaaaacctagatctcttgtctttagagtcaaggnnnnnnnnggttcaagatattttgcaaaacaaaaggtatttgcttgttcttgatgatgtttggag |
218 |
Q |
| |
|
||||||| |||||||||||||||||||| | | ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
16867889 |
gaaaaaatctagatctcttgtctttagaaaccttgagaaaaaaggttcaagaaattttgcaaaacaaaaagtatttgcttgttcttgatgatgtttggag |
16867988 |
T |
|
| Q |
219 |
tgaagaccaagagaaatggaataagttaaagtctttgttgcaacttggaaagaaaggtgcatcaattttggtcactaccagacttgagattgttgcatcc |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16867989 |
tgaagaccaagagaaatggaataagttaaagtctttgttgcaacttggaaagaaaggtgcatcaattttggtcactaccagacttgagattgttgcatcc |
16868088 |
T |
|
| Q |
319 |
atcatgggaactaaggttcatcctttagcacagttatttgatgatgacatctggtctttgttcaaacaacatgcttttggagcaaatagagaagggcgtg |
418 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16868089 |
atcatgggaactaaggttcatcctttagcacagttatctgatgatgacatctgatcgttgttcaaacaacatgcttttggagcaaatagagaagggcgtg |
16868188 |
T |
|
| Q |
419 |
cagagcttgtggaaataggccaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggaagccttttgcgctttaaaagcgatga |
518 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16868189 |
cagagcttgtggaaataggccaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggaagccttttgcgctttaaaagcgatga |
16868288 |
T |
|
| Q |
519 |
acatcaatggatttctgtggtggaaagtgagttttggaatttagctgatgataaccatgtcatgtctgctttgagattgagctactttaacttgaaattg |
618 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
16868289 |
acatcaatggacttctgtggtggaaagtgagttttggaatttagcagatgataaccatgtcatgtctgctttgagactgagctactttaacttgaaattg |
16868388 |
T |
|
| Q |
619 |
tcattgaggccatgttttactttttgtgctgtttttcctaaggatttagaaatggataaggaagaactcattcaactttggatggctaatggacttgttg |
718 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
16868389 |
tcattgaggccatgttttactttttgtgctgtttttcctaaggattttgaaatggaaaaggaatttttcattcaactttggatggctaatggacttgtta |
16868488 |
T |
|
| Q |
719 |
catctagaggaaacttacagatggagcatgttggtaatgaggtatggaatgaattataccaaaggtcattttttcaagaagttaaatcagattttgttgg |
818 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||| || || |
|
|
| T |
16868489 |
catctagaggaaacttacagatggagcatgttggtaatgaggtatggaatgaattatatcaaaggtcattttttcaagaaatcaaatcagatttagtagg |
16868588 |
T |
|
| Q |
819 |
taacattacattcaaaattcatgattttatccatgatttaggtcagtcttttatgggagaagaatgtat |
887 |
Q |
| |
|
|||||||||||||||||| |||||||| |||||||||||| | ||||| |||| |||||||||||||| |
|
|
| T |
16868589 |
taacattacattcaaaatgcatgatttagtccatgatttagctaagtctgttattggagaagaatgtat |
16868657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 600; E-Value: 0
Query Start/End: Original strand, 19 - 885
Target Start/End: Complemental strand, 17069881 - 17069012
Alignment:
| Q |
19 |
gaaagggtaaaaacacattttgacttgaaaatatgggtgtgtgtttcggatgatttcagtttgatgaaaattttagagtccatcctagaaaacaccattg |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
17069881 |
gaaagggtaaaaacacattttgacttgaaaatatgggtgtgtgtttcggatgatttcagtttgatgaaaattttagagtccatcatagaaaacaccattg |
17069782 |
T |
|
| Q |
119 |
gaaaaaacctagatctcttgtctttagagtcaaggnnnnnnnnggttcaagatattttgcaaaacaaaaggtatttgcttgttcttgatgatgtttggag |
218 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||| |
|
|
| T |
17069781 |
gaaaaaatctagatctcttgtctttagagtcaaggcaaaaaaaggttcaagaaattttgcaaagcaaaaggtatttgcttgttcttgatgatgtgtggag |
17069682 |
T |
|
| Q |
219 |
tgaagaccaagagaaatggaataagttaaagtctttgttgcaacttggaaagaaaggtgcatcaattttggtcactaccagacttgagattgttgcatcc |
318 |
Q |
| |
|
||| ||||||| ||||||||||| || ||||||||||| | | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
17069681 |
tgatgaccaagtgaaatggaatagcttcaagtctttgttaccaaatggaaagaaaggtgcatcaattttagtcactaccagacttgacattgttgcatcc |
17069582 |
T |
|
| Q |
319 |
atcatgggaactaaggtt---catcctttagcacagttatttgatgatgacatctggtctttgttcaaacaacatgcttttggagcaaatagagaagggc |
415 |
Q |
| |
|
|||||||||||| | | | ||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
17069581 |
atcatgggaactcatgatgctcatcctttatcacggttatctgatgatgacatctggtctttgttcaaacaacatgcttttggagcaaagagagaagggc |
17069482 |
T |
|
| Q |
416 |
gtgcagagcttgtggaaataggccaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggaagccttttgcgctttaaaagcga |
515 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17069481 |
gtgcagagcttgtggaaataggccaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggaagccttttgcgctttaaaagcga |
17069382 |
T |
|
| Q |
516 |
tgaacatcaatggatttctgtggtggaaagtgagttttggaatttagctgatgataaccatgtcatgtctgctttgagattgagctactttaacttgaaa |
615 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||| | ||||||| |||||||||| |
|
|
| T |
17069381 |
tgaacatcaatggatttctgtggtggaaagtgagttttggaatttagacgatgagaaccctgtcatgtctgctttgagactaagctactataacttgaaa |
17069282 |
T |
|
| Q |
616 |
ttgtcattgaggccatgttttactttttgtgctgtttttcctaaggatttagaaatggataaggaagaactcattcaactttggatggctaatggacttg |
715 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||||||||||||||| | ||||| |||||| |||||||| |||||||||||||||||| ||| |
|
|
| T |
17069281 |
ttgtcattgaggccatgttttactttctgtgttgtttttcctaaggattttgtaatggtgaaggaaaggctcattcatctttggatggctaatggatttg |
17069182 |
T |
|
| Q |
716 |
ttgcatctagaggaaacttacagatggagcatgttggtaatgaggtatggaatgaattataccaaaggtcattttttcaagaagttaaatcagattttgt |
815 |
Q |
| |
|
|| |||||||||| || ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||| | |
|
|
| T |
17069181 |
ttacatctagaggtaatttacagatggagcatgttggtaatgagatatgggatgaattataccaaaggtcattttttcaagaagtcaaatcagatttagc |
17069082 |
T |
|
| Q |
816 |
tggtaacattacattcaaaattcatgattttatccatgatttaggtcagtcttttatgggagaagaatgt |
885 |
Q |
| |
|
|||||||||||||| ||||| |||||||| |||||||||||| | ||||| |||| |||||||||||| |
|
|
| T |
17069081 |
aggtaacattacatttaaaatgcatgatttagtccatgatttagctaagtctgttattggagaagaatgt |
17069012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 547; E-Value: 0
Query Start/End: Original strand, 19 - 885
Target Start/End: Complemental strand, 16797541 - 16796675
Alignment:
| Q |
19 |
gaaagggtaaaaacacattttgacttgaaaatatgggtgtgtgtttcggatgatttcagtttgatgaaaattttagagtccatcctagaaaacaccattg |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
16797541 |
gaaagggtaaaaacacattttgacttgaaaatatgggtgtgtgtttcggatgatttcagtttgatgaaaattttagagtctatcatagaaaacaccattg |
16797442 |
T |
|
| Q |
119 |
gaaaaaacctagatctcttgtctttagagtcaaggnnnnnnnnggttcaagatattttgcaaaacaaaaggtatttgcttgttcttgatgatgtttggag |
218 |
Q |
| |
|
||||||| ||||| ||||||||||||||||| | ||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||| |
|
|
| T |
16797441 |
gaaaaaatctagaactcttgtctttagagtccttgcgaaaaaaggttcaagaaattttgcaaaaccaaaggtatttgcttgttcttgatgatgtgtggag |
16797342 |
T |
|
| Q |
219 |
tgaagaccaagagaaatggaataagttaaagtctttgttgcaacttggaaagaaaggtgcatcaattttggtcactaccagacttgagattgttgcatcc |
318 |
Q |
| |
|
||| ||||||| ||||||||||| ||| ||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
16797341 |
tgatgaccaagtgaaatggaatacgttcaagtcattgttgccaaatggaaagaaaggtgcatcaattttggtcactaccagacttgacattgttgcatcc |
16797242 |
T |
|
| Q |
319 |
atcatgggaactaaggttcatcctttagcacagttatttgatgatgacatctggtctttgttcaaacaacatgcttttggagcaaatagagaagggcgtg |
418 |
Q |
| |
|
|||||||||||| | ||||||| |||| ||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |
|
|
| T |
16797241 |
atcatgggaacttatgttcatcatttaacacggttatctgatgatgacatctggtctttgttcaaacaacaagcttttggagcaaatagagaagagcgtg |
16797142 |
T |
|
| Q |
419 |
cagagcttgtggaaataggccaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggaagccttttgcgctttaaaagcgatga |
518 |
Q |
| |
|
|||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| || |
|
|
| T |
16797141 |
cagagcttgtggcaataggcaagaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggaagcagtttgcgctttacaagcgacga |
16797042 |
T |
|
| Q |
519 |
acatcaatggatttctgtggtggaaagtgagttttggaatttagctgatgataaccatgtcatgtctgctttgagattgagctactttaacttgaaattg |
618 |
Q |
| |
|
|||||||||||||||||| |||||||||| |||||||||||| || | | | | | | ||||||||||||||| | | ||||||||||||||||||||| |
|
|
| T |
16797041 |
acatcaatggatttctgtactggaaagtgaattttggaatttacctcaggttgatcgtatcatgtctgctttgacactaagctactttaacttgaaattg |
16796942 |
T |
|
| Q |
619 |
tcattgaggccatgttttactttttgtgctgtttttcctaaggatttagaaatggataaggaagaactcattcaactttggatggctaatggacttgttg |
718 |
Q |
| |
|
||||||||||||||||||||||| || |||||||||||||||||||| ||||||| |||||| | |||||||| |||||||||||||||||||||||| |
|
|
| T |
16796941 |
tcattgaggccatgttttactttctgcgctgtttttcctaaggattttgaaatggtgaaggaacatctcattcatctttggatggctaatggacttgtta |
16796842 |
T |
|
| Q |
719 |
catctagaggaaacttacagatggagcatgttggtaatgaggtatggaatgaattataccaaaggtcattttttcaagaagttaaatcagattttgttgg |
818 |
Q |
| |
|
|||||||||| || ||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||| ||||||||||| | || |
|
|
| T |
16796841 |
catctagaggtaatttacagatggagcatgttggtaatgggatatgggatgaattataccaaaggtcattttttcaagaagtcaaatcagatttagcagg |
16796742 |
T |
|
| Q |
819 |
taacattacattcaaaattcatgattttatccatgatttaggtcagtcttttatgggagaagaatgt |
885 |
Q |
| |
|
|||||||||||||||||| |||||||| | |||||||||| | ||||| |||||| |||||||||| |
|
|
| T |
16796741 |
taacattacattcaaaatgcatgatttagtgcatgatttagctaagtctgttatggtagaagaatgt |
16796675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 480; E-Value: 0
Query Start/End: Original strand, 34 - 900
Target Start/End: Complemental strand, 16788325 - 16787458
Alignment:
| Q |
34 |
cattttgacttgaaaatatgggtgtgtgtttcggatgatttcagtttgatgaaaattttagagtccatcctagaaaacaccattggaaaaaacctagatc |
133 |
Q |
| |
|
||||||||| ||||||||||| | | |||||| ||||||||||| ||||||| |||||||| || || ||||| |||| ||||||||||| | ||||| |
|
|
| T |
16788325 |
cattttgacctgaaaatatggatttttgtttcagatgatttcagcatgatgaaggttttagag-ccgtcatagaagacacaattggaaaaaatccagatc |
16788227 |
T |
|
| Q |
134 |
tcttgtctttagagtcaaggnnnnnnnnggttcaagatattttgcaaaacaaaaggtatttgcttgttcttgatgatgtttggagtgaagaccaagagaa |
233 |
Q |
| |
|
||| ||||| ||||||| | ||||||||| ||||| ||||||||||||||| | ||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
16788226 |
tctcatctttggagtcaatgcgaaagaaggttcaagaaatttt-caaaacaaaaggtatctacttgttcttgatgatgtgtggaatgaagaccaagagaa |
16788128 |
T |
|
| Q |
234 |
atggaataagttaaagtctttgttgcaacttggaaagaaaggtgcatcaattttggtcactaccagacttgagattgttgcatccatcatgggaactaag |
333 |
Q |
| |
|
|||||||||||| ||||||||||||||| || || ||||||||||||||||||||||||| | ||||||| ||||||||||||||||||| |||| | |
|
|
| T |
16788127 |
atggaataagttcaagtctttgttgcaatatgaaacgaaaggtgcatcaattttggtcactgcacgacttgacattgttgcatccatcatggcaacttat |
16788028 |
T |
|
| Q |
334 |
---gttcatcctttagcacagttatttgatgatgacatctggtctttgttcaaacaacatgcttttggagcaaatagagaagggcgtgcagagcttgtgg |
430 |
Q |
| |
|
| ||||| |||| ||| |||| |||| ||||||||||||||||||||||||||| ||||| ||| ||||||||||| |||||||||||||||| |
|
|
| T |
16788027 |
catgctcatcgtttaacacgcttatctgattctgacatctggtctttgttcaaacaacaagctttcagagaaaatagagaagaacgtgcagagcttgtgg |
16787928 |
T |
|
| Q |
431 |
aaataggccaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggaagccttttgcgctttaaaagcgatgaacatcaatggat |
530 |
Q |
| |
|
|||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||| |||||| |||||||||||||| |
|
|
| T |
16787927 |
aaataggcaagaagttagtgagaaaatgtgtgggttcaactcttgctgctaaagtattgggaagcagtttgcgatttacaagcgacgaacatcaatggat |
16787828 |
T |
|
| Q |
531 |
ttctgtggtggaaagtgagttttggaatttagctgatgataaccatgtcatgtctgctttgagattgagctactttaacttgaaattgtcattgaggcca |
630 |
Q |
| |
|
|||||| ||||||||||||||||||||||| |||| ||| | | | ||||||||| ||||||| | ||||||||||||||||||||||| ||||||||| |
|
|
| T |
16787827 |
ttctgtactggaaagtgagttttggaatttaactgaggatgatcctatcatgtctgttttgagactaagctactttaacttgaaattgtccttgaggcca |
16787728 |
T |
|
| Q |
631 |
tgttttactttttgtgctgtttttcctaaggatttagaaatggataaggaagaactcattcaactttggatggctaatggacttgttgcatctagaggaa |
730 |
Q |
| |
|
|||||||| || || ||||||||||| |||||||| ||||||| |||||| | |||||||| |||||||||||||||||||||||| |||||||||||| |
|
|
| T |
16787727 |
tgttttaccttctgcgctgtttttcccaaggattttgaaatggtgaaggaaaatctcattcatctttggatggctaatggacttgttacatctagaggaa |
16787628 |
T |
|
| Q |
731 |
acttacagatggagcatgttggtaatgaggtatggaatgaattataccaaaggtcattttttcaagaagttaaatcagattttgttggtaacattacatt |
830 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16787627 |
acttacagatggaggatgttggtaatgaggtatggaatgaattataccaaaggtcattttttcaagaagttaaatcagattttgttggtaacattacatt |
16787528 |
T |
|
| Q |
831 |
caaaattcatgattttatccatgatttaggtcagtcttttatgggagaagaatgtattccttatgatgtc |
900 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
16787527 |
caaaatgcatgattttatccatgatttaggtcagtcttttatgggagaagaatgtatttcttatgatgtc |
16787458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 433; E-Value: 0
Query Start/End: Original strand, 19 - 546
Target Start/End: Complemental strand, 16838053 - 16837525
Alignment:
| Q |
19 |
gaaagggtaaaaacacattttgacttgaaaatatgggtgtgtgtttcggatgatttcagtttgatgaaaattttagagtccatcctagaaaacaccattg |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
16838053 |
gaaagggtaaaaacacattttgacttgaaaatatgggtgtgtgtttcggatgatttcagtttgatgaaaattttagagtccatcatagaaaacaccattg |
16837954 |
T |
|
| Q |
119 |
gaaaaaac-ctagatctcttgtctttagagtcaaggnnnnnnnnggttcaagatattttgcaaaacaaaaggtatttgcttgttcttgatgatgtttgga |
217 |
Q |
| |
|
||||||| ||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
16837953 |
gaaaaaaatctagatctcttgtctttagagtccttgcgaaaaaaggttcaagaaattttgcaaaacaaaaggtatttgcttgttcttgatgatgtgtgga |
16837854 |
T |
|
| Q |
218 |
gtgaagaccaagagaaatggaataagttaaagtctttgttgcaacttggaaagaaaggtgcatcaattttggtcactaccagacttgagattgttgcatc |
317 |
Q |
| |
|
|||| ||||||| ||||||||||| ||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16837853 |
gtgatgaccaagtgaaatggaatacgttcaagtctttgttgccaaatggaaagaaaggtgcatcaattttggtcactaccagacttgagattgttgcatc |
16837754 |
T |
|
| Q |
318 |
catcatgggaactaaggttcatcctttagcacagttatttgatgatgacatctggtctttgttcaaacaacatgcttttggagcaaatagagaagggcgt |
417 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16837753 |
catcatgggaactaaggttcatcctttagcacagttatctgatgatgacatctggtcgttgttcaaacaacatgcttttggagcaaatagagaagggcgt |
16837654 |
T |
|
| Q |
418 |
gcagagcttgtggaaataggccaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggaagccttttgcgctttaaaagcgatg |
517 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16837653 |
gcagagcttgtggaaataggccaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggaagccttttgcgctttaaaagcgatg |
16837554 |
T |
|
| Q |
518 |
aacatcaatggatttctgtggtggaaagt |
546 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
16837553 |
aacatcaatggatttctgtggtggaaagt |
16837525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 430; E-Value: 0
Query Start/End: Original strand, 19 - 899
Target Start/End: Complemental strand, 16987829 - 16986946
Alignment:
| Q |
19 |
gaaagggtaaaaacacattttgacttgaaaatatgggtgtgtgtttcggatgatttcagtttgatgaaaattttagagtccatcctagaaaacaccattg |
118 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||| ||| | |||||||| |||| |
|
|
| T |
16987829 |
gaaagtgtaaagacacattttgacttgaaaatatgggtgtgtgtttctgatgatttcagtatgatgaaagttttagagtcgatcattgaaaacactattg |
16987730 |
T |
|
| Q |
119 |
gaaaaaacctagatctcttgtctttagagtcaaggnnnnnnnnggttcaagatattttgcaaaacaaaaggtatttgcttgttcttgatgatgtttggag |
218 |
Q |
| |
|
||||||| | | |||||| |||||||||||||| | |||||||| ||| | ||||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
16987729 |
gaaaaaatccacatctctcgtctttagagtcaatgcaaaaaaatgttcaagaaattctacaaaacaaaaggtatttacttgttcttgatgatgtgtggac |
16987630 |
T |
|
| Q |
219 |
tgaagaccaagagaaatggaataagttaaagtctttgttgcaacttggaaagaaaggtgcatcaattttggtcactaccagacttgagattgttgcatcc |
318 |
Q |
| |
|
|||||||| |||||||||||||||||| |||||| |||||||| | ||| ||||||||||||| |||||||||| ||||||||||| | |||||||||| |
|
|
| T |
16987629 |
tgaagaccgagagaaatggaataagttcaagtctgtgttgcaaaatagaacgaaaggtgcatcagttttggtcaccaccagacttgacaatgttgcatcc |
16987530 |
T |
|
| Q |
319 |
atcatgggaactaag---gttcatcctttagcacagttatttgatgatgacatctggtctttgttcaaacaacatgcttttggagcaaatagagaagggc |
415 |
Q |
| |
|
|||||||||||| | | ||||||||| | |||| ||||||| ||||||||||||||||||||||||| ||||| |||| |||| |||||| || |
|
|
| T |
16987529 |
atcatgggaacttatcctgctcatcctttggtcggcttatctgatgatcacatctggtctttgttcaaacaacaagctttcggagaaaatggagaagagc |
16987430 |
T |
|
| Q |
416 |
gtgcagagcttgtggaaataggccaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggaagccttttgcgctttaaaagcga |
515 |
Q |
| |
|
|||||||||||||||||||||| | ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||| | ||| || |
|
|
| T |
16987429 |
gtgcagagcttgtggaaataggtaagaagttggtgagaaaatttgtgggttcacctcttgctgctaaagtattgggaagcagtttgcaacgtgaaactga |
16987330 |
T |
|
| Q |
516 |
tgaacatcaatggatttctgtggtggaaagtgagttttggaatttagctgatgataaccatgtcatgtctgctttgagattgagctactttaacttgaaa |
615 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| ||||||||||| |||| ||| | | | |||| |||||||||||| | |||||||| ||| ||||| |
|
|
| T |
16987329 |
cgaacatcaatggatttctgtactggaaagtgagatttggaatttacctgaggatgatcctatcatttctgctttgagactaagctacttcaacatgaaa |
16987230 |
T |
|
| Q |
616 |
ttgtcattgaggccatgttttactttttgtgctgtttttcctaaggatttagaaatggataaggaagaactcattcaactttggatggctaatggacttg |
715 |
Q |
| |
|
|||||| | |||||||||||||| || ||||||||||||||||||||||| ||||||| |||||||| |||||||| |||||||||||||||||||||| |
|
|
| T |
16987229 |
ttgtcactaaggccatgttttaccttctgtgctgtttttcctaaggattttgaaatggtgaaggaagatctcattcatctttggatggctaatggacttg |
16987130 |
T |
|
| Q |
716 |
ttgcatctagaggaaacttacagatggagcatgttggtaatgaggtatggaatgaattataccaaaggtcattttttcaagaagttaaatcagattttgt |
815 |
Q |
| |
|
|| |||||||||| || ||||||||||||||||||||| |||||||||||||| |||||| ||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
16987129 |
ttacatctagaggtaatttacagatggagcatgttggtgatgaggtatggaatcaattatggcaaagatcattttttcaagaagttaaatctgatttaac |
16987030 |
T |
|
| Q |
816 |
tggtaacattacattcaaaattcatgattttatccatgatttaggtcagtcttttatgggagaagaatgtattccttatgatgt |
899 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||| ||| ||| |||||||||||||||||||| |||||||||| |
|
|
| T |
16987029 |
aggtaacattacattcaaaatgcatgattttatccatgatttagctcaatctattatgggagaagaatgtatttcttatgatgt |
16986946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 270 - 859
Target Start/End: Complemental strand, 16781223 - 16780631
Alignment:
| Q |
270 |
gaaaggtgcatcaattttggtcactaccagacttgagattgttgcatccatcatgggaactaag---gttcatcctttagcacagttatttgatgatgac |
366 |
Q |
| |
|
||||||| |||| ||||| ||||| || ||||||| |||||||||||||||||||||||| | | ||| | ||| | | |||| ||| || ||| |
|
|
| T |
16781223 |
gaaaggttcatctattttagtcacaacacgacttgatattgttgcatccatcatgggaactcaccctgctcaccatttggtaggtttatatgacgacgac |
16781124 |
T |
|
| Q |
367 |
atctggtctttgttcaaacaacatgcttttggagcaaatagagaagggcgtgcagagcttgtggaaataggccaaaagttagtgagaaaatgtgtgggtt |
466 |
Q |
| |
|
|| ||| | || || |||||||| ||||||||| | ||| | |||| || ||||||||||| | ||||||| | || |||||| |||||||||||||| |
|
|
| T |
16781123 |
atttggacattatttaaacaacacgcttttggacctaatggggaagagcctgcagagcttgcagcaataggcaaggagatagtgataaaatgtgtgggtt |
16781024 |
T |
|
| Q |
467 |
cacctcttgctgctaaagtattgggaagccttttgcgctttaaaagcgatgaacatcaatggatttctgtggtggaaagtgagttttggaatttagctga |
566 |
Q |
| |
|
|||| |||||||| || || ||||||||||||||||||||||||| || |||||||||||| ||||||| |||||||||| ||||||| ||| |||| |
|
|
| T |
16781023 |
caccacttgctgccaaggttttgggaagccttttgcgctttaaaaatgaggaacatcaatggctttctgtaaaggaaagtgagctttggaagttatctga |
16780924 |
T |
|
| Q |
567 |
tgataaccatgtcatgtctgctttgagattgagctactttaacttgaaattgtcattgaggccatgttttactttttgtgctgtttttcctaaggattta |
666 |
Q |
| |
|
||||||| | ||||||||||||||||| | ||||||||||| ||||| ||||| || ||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
16780923 |
ggataaccctatcatgtctgctttgagactaagctactttaatttgaatttgtccttaaggccgtgttttactttttgtgctgtttttcctaaggatttt |
16780824 |
T |
|
| Q |
667 |
gaaatggataaggaagaactcattcaactttggatggctaatggacttgttgcatctagaggaaacttacagatggagcatgttggtaatgaggtatgga |
766 |
Q |
| |
|
||||||| |||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16780823 |
gaaatggtgaaggaaaatctcattcaactttggatggctaatggacttgttacatctagaggaaacttacagatggagcatgttggtaatgaggtatgga |
16780724 |
T |
|
| Q |
767 |
atgaattataccaaaggtcattttttcaagaagttaaatcagattttgttggtaacattacattcaaaattcatgattttatccatgatttag |
859 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
16780723 |
atgaattataccaaaggtcattttttcaagaagttaaatcagattttgtaggtaacattacattcaaaatgcatgatttagtccatgatttag |
16780631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 19 - 887
Target Start/End: Original strand, 18872970 - 18873847
Alignment:
| Q |
19 |
gaaagggtaaaaacacattttgacttgaaaatatgggtgtgtgtttcggatgatttcagtttgatgaaaattttagagtccatcctagaaaacaccattg |
118 |
Q |
| |
|
||||||||| | ||||| ||| ||||||||||||||||||||||||| || ||||| ||| |||||||| |||| |||||||| ||||| |||| || |
|
|
| T |
18872970 |
gaaagggtagatacacactttaacttgaaaatatgggtgtgtgtttctgaggattttagtatgatgaaagttttgcagtccatcatagaatccaccgatg |
18873069 |
T |
|
| Q |
119 |
gaaaaaacctagatctcttgtctttagagtcaaggnnnnnnnnggttcaagatattttgcaaaacaaaaggtatttgcttgttcttgatgatgtttggag |
218 |
Q |
| |
|
||||||| | |||||||| ||||||||| |||| | |||| || ||||||||||||||||||||||| | ||||||||||||||||| |||| |
|
|
| T |
18873070 |
gaaaaaatccagatctctcgtctttagaatcaatgcaaaagaaggttaaaaatattttgcaaaacaaaaggtatctacttgttcttgatgatgtgtggaa |
18873169 |
T |
|
| Q |
219 |
tgaagaccaagagaaatggaataagttaaagtctttgttgcaacttggaaa------gaaaggtgcatcaattttggtcactaccagacttgagattgtt |
312 |
Q |
| |
|
|||||||||||||||||||||| |||| |||| ||| |||||| |||||| ||||||||||||| |||||||||| ||||||||||| |||||| |
|
|
| T |
18873170 |
tgaagaccaagagaaatggaatcagttcaagtattttctgcaacgtggaaatggcacgaaaggtgcatcagttttggtcacaaccagacttgacattgtt |
18873269 |
T |
|
| Q |
313 |
gcatccatcatgggaactaag---gttcatcctttagcacagttatttgatgatgacatctggtctttgttcaaacaacatgcttttggagcaaatagag |
409 |
Q |
| |
|
||||| |||||||||||| | | ||||| ||| | |||| |||||||| |||||||| |||||| |||||| | ||||||| | ||||||||| |
|
|
| T |
18873270 |
gcatcaatcatgggaacttatcctgctcatcatttgttaggcttatctgatgatgccatctggtatttgtttaaacaaaaagcttttgaaacaaatagag |
18873369 |
T |
|
| Q |
410 |
aagggcgtgcagagcttgtggaaataggccaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggaagccttttgcgctttaa |
509 |
Q |
| |
|
||| ||||||||||||||||| ||||||| | ||||||||||||||||||||||||| |||||||| || |||||| | |||||||||||||||||||| |
|
|
| T |
18873370 |
aagagcgtgcagagcttgtggcaataggcaaggagttagtgagaaaatgtgtgggttctcctcttgccgcaaaagtactaggaagccttttgcgctttaa |
18873469 |
T |
|
| Q |
510 |
aagcgatgaacatcaatggatttctgtggtggaaagtgagttttggaatttagctgatgataaccatgtcatgtctgctttgagattgagctactttaac |
609 |
Q |
| |
|
|| || |||||||||||| ||||||| ||||||| ||||||||| ||| | || || || | | ||||||||| |||||| | ||||||||||| |
|
|
| T |
18873470 |
aactgaggaacatcaatggctttctgtaaaggaaagtaagttttggagcttatccgaggacaatcctatcatgtctgtattgagactcagctactttaat |
18873569 |
T |
|
| Q |
610 |
ttgaaattgtcattgaggccatgttttactttttgtgctgtttttcctaaggatttagaaatggataaggaagaactcattcaactttggatggctaatg |
709 |
Q |
| |
|
|||||||| ||| |||||| ||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||| || || |||||| ||||||||| |
|
|
| T |
18873570 |
ttgaaattatcactgaggctgtgttttactttttgtgcggtttttcctaaggattttgaaatggtgaaggaagaactgatccatctttggttggctaatg |
18873669 |
T |
|
| Q |
710 |
gacttgttgcatctagaggaaacttacagatggagcatgttggtaatgaggtatggaatgaattataccaaaggtcattttttcaagaagttaaatcaga |
809 |
Q |
| |
|
|| | | | || ||||| ||| || |||||||||||||| | || || |||||||||||||| || ||||||||||||||||| ||| | || |
|
|
| T |
18873670 |
gattcatctcttccgttggaaatttagaggtggagcatgttggtcaagaagtgtggaatgaattatatgcgagatcattttttcaagaagtcaaaactga |
18873769 |
T |
|
| Q |
810 |
ttttgttggtaacattacattcaaaattcatgattttatccatgatttaggtcagtcttttatgggagaagaatgtat |
887 |
Q |
| |
|
| ||| | ||||||||||||| |||||||| || |||||||||| |||||| ||| |||||||||||||| |
|
|
| T |
18873770 |
taaaaagggtgaggttacattcaaaatgcatgatttaattcatgatttagctcagtccattacaggagaagaatgtat |
18873847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 19 - 887
Target Start/End: Original strand, 18805976 - 18806853
Alignment:
| Q |
19 |
gaaagggtaaaaacacattttgacttgaaaatatgggtgtgtgtttcggatgatttcagtttgatgaaaattttagagtccatcctagaaaacaccattg |
118 |
Q |
| |
|
||||||||| | ||||| ||| ||||||||||||||||||||||||| || ||||| ||| |||||||| |||| |||||||| ||||| | || ||| |
|
|
| T |
18805976 |
gaaagggtagatacacactttaacttgaaaatatgggtgtgtgtttctgaggattttagtatgatgaaagttttgcagtccatcatagaatccgccgttg |
18806075 |
T |
|
| Q |
119 |
gaaaaaacctagatctcttgtctttagagtcaaggnnnnnnnnggttcaagatattttgcaaaacaaaaggtatttgcttgttcttgatgatgtttggag |
218 |
Q |
| |
|
|||||| | |||||||| ||||||||| |||| | |||||| | ||||||||||||||||||||| | ||||||||||||||||| |||| |
|
|
| T |
18806076 |
gaaaaagtccagatctctcgtctttagaatcaatgcaaaaggaagttcaaaaaattttgcaaaacaaaaggtatctacttgttcttgatgatgtgtggaa |
18806175 |
T |
|
| Q |
219 |
tgaagaccaagagaaatggaataagttaaagtctttgttgcaacttggaaa------gaaaggtgcatcaattttggtcactaccagacttgagattgtt |
312 |
Q |
| |
|
|||||||||||||||||||||| |||| |||| ||| |||||| |||||| |||||||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
18806176 |
tgaagaccaagagaaatggaatcagttcaagtattttctgcaacgtggaaatggcacgaaaggtgcatcaattttggtcacaaccagacttgacattgtt |
18806275 |
T |
|
| Q |
313 |
gcatccatcatgggaactaag---gttcatcctttagcacagttatttgatgatgacatctggtctttgttcaaacaacatgcttttggagcaaatagag |
409 |
Q |
| |
|
||||| |||||||||||| | | ||||| ||| | |||| |||||||| ||||||| |||||| |||||| | ||||||| | ||||||||| |
|
|
| T |
18806276 |
gcatcaatcatgggaacttatcctgctcatcatttgttaggcttatctgatgatgcaatctggtatttgtttaaacaaaaagcttttgaaacaaatagag |
18806375 |
T |
|
| Q |
410 |
aagggcgtgcagagcttgtggaaataggccaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggaagccttttgcgctttaa |
509 |
Q |
| |
|
||| ||| ||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||| || |||||| | |||||||||||||||||||| |
|
|
| T |
18806376 |
aagagcgagcagagcttgtggcaataggcaaggagttagtgagaaaatgtgtgggttcacctcttgccgcaaaagtactaggaagccttttgcgctttaa |
18806475 |
T |
|
| Q |
510 |
aagcgatgaacatcaatggatttctgtggtggaaagtgagttttggaatttagctgatgataaccatgtcatgtctgctttgagattgagctactttaac |
609 |
Q |
| |
|
|| || |||||||||||| ||||||| ||||||| ||||||||| ||| | || || || | | ||||||||| ||||||| | ||||||||||| |
|
|
| T |
18806476 |
aactgaggaacatcaatggctttctgtaaaggaaagtaagttttggagcttatccgaggacaatcctatcatgtctgttttgagactcagctactttaat |
18806575 |
T |
|
| Q |
610 |
ttgaaattgtcattgaggccatgttttactttttgtgctgtttttcctaaggatttagaaatggataaggaagaactcattcaactttggatggctaatg |
709 |
Q |
| |
|
|||||||| ||| |||||| ||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||| || || |||||| ||||||||| |
|
|
| T |
18806576 |
ttgaaattatcactgaggctgtgttttactttttgtgcggtttttcctaaggattttgaaatggtgaaggaagaactgatccatctttggttggctaatg |
18806675 |
T |
|
| Q |
710 |
gacttgttgcatctagaggaaacttacagatggagcatgttggtaatgaggtatggaatgaattataccaaaggtcattttttcaagaagttaaatcaga |
809 |
Q |
| |
|
|| | | | || ||||| ||| || |||||||||||||| | || || |||||||||||||| || ||||||||||||||||| ||| | || |
|
|
| T |
18806676 |
gattcatctcttccgttggaaatttagaggtggagcatgttggtcaagaagtgtggaatgaattatatgcgagatcattttttcaagaagtaaaaactga |
18806775 |
T |
|
| Q |
810 |
ttttgttggtaacattacattcaaaattcatgattttatccatgatttaggtcagtcttttatgggagaagaatgtat |
887 |
Q |
| |
|
| ||| | ||||||||||||| |||||||| || |||||||||| |||||| ||| |||||||||||||| |
|
|
| T |
18806776 |
taaaaagggtgaggttacattcaaaatgcatgatttaattcatgatttagctcagtccattacaggagaagaatgtat |
18806853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 366 - 800
Target Start/End: Complemental strand, 16843828 - 16843397
Alignment:
| Q |
366 |
catctggtctttgttcaaacaacatgcttttggagcaaatagagaagggcgtgcagagcttgtggaaataggccaaaagttagtgagaaaatgtgtgggt |
465 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||||| | ||||||| |||||||| ||||| |||||| | || |||| ||||||||||||||| |
|
|
| T |
16843828 |
catctggtctttgttcaagcaacacgcttttggagctgaaagagaagaacgtgcagaccttgtaacaataggtaaggagatagttagaaaatgtgtgggt |
16843729 |
T |
|
| Q |
466 |
tcacctcttgctgctaaagtattgggaagccttttgcgctttaaaagcgatgaacatcaatggatttctgtggtggaaagtgagttttggaatttagctg |
565 |
Q |
| |
|
|| ||||||||||| |||||| | ||||||||| |||| ||||||| || ||| ||||||| ||||| | |||||||||| ||||||||||| ||| |
|
|
| T |
16843728 |
tcgcctcttgctgccaaagtactaggaagccttctgcggtttaaaactgaggaatgtcaatggctttctataaaggaaagtgagatttggaatttatctg |
16843629 |
T |
|
| Q |
566 |
atgataaccatgtcatgtctgctttgagattgagctactttaacttgaaattgtcattgaggccatgttttactttttgtgctgtttttcctaaggattt |
665 |
Q |
| |
|
|| |||| | || || ||||| | ||||||||| || | ||||| ||||||| |||||||||||| ||||||||||| |||||||| ||||| |
|
|
| T |
16843628 |
ataataaaatt---atatcagctttaaatctgagctactacaatctaaaattatcattgaagccatgttttacattttgtgctgtatttcctaaagattt |
16843532 |
T |
|
| Q |
666 |
agaaatggataaggaagaactcattcaactttggatggctaatggacttgttgcatctagaggaaacttacagatggagcatgttggtaatgaggtatgg |
765 |
Q |
| |
|
| ||||| |||||||| | ||||| ||||||||||| |||||| || || | || |||||||| ||| |||||||| | ||||| |||||||| ||| |
|
|
| T |
16843531 |
tgtaatggtgaaggaagatgtaattcatctttggatggcaaatggatttatttcctccagaggaaatttagagatggaggaggttggcaatgaggtgtgg |
16843432 |
T |
|
| Q |
766 |
aatgaattataccaaaggtcattttttcaagaagt |
800 |
Q |
| |
|
|||||| ||||||| || ||||||||||||||||| |
|
|
| T |
16843431 |
aatgaactataccagagatcattttttcaagaagt |
16843397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 162 - 296
Target Start/End: Complemental strand, 16844065 - 16843925
Alignment:
| Q |
162 |
ggttcaagatattttgcaaaacaaaaggtatttgcttgttcttgatgatgtttggagtgaagaccaagagaaatggaataagttaaagtctttgttgcaa |
261 |
Q |
| |
|
||||||| |||||||||||||||||||||||| ||||| ||||| |||||||||| |||||||||| | |||||| ||||||| | |||||| |||||| |
|
|
| T |
16844065 |
ggttcaaactattttgcaaaacaaaaggtatttacttgtccttgacgatgtttggaatgaagaccaacataaatgggataagttcatgtcttttttgcaa |
16843966 |
T |
|
| Q |
262 |
cttggaaa------gaaaggtgcatcaattttggtcactac |
296 |
Q |
| |
|
|||||| |||||||||||| ||||||||||||| |
|
|
| T |
16843965 |
tgtggaaatggaacaaaaggtgcatcagttttggtcactac |
16843925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 631 - 800
Target Start/End: Original strand, 18870507 - 18870676
Alignment:
| Q |
631 |
tgttttactttttgtgctgtttttcctaaggatttagaaatggataaggaagaactcattcaactttggatggctaatggacttgttgcatctagaggaa |
730 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||| ||||||| ||||||||||| || || |||||| || |||||||| | | | || | |||| |
|
|
| T |
18870507 |
tgttttaccttttgtgaggtttttcctaaggattttgaaatggtgaaggaagaactgatccatctttggttgactaatggattcatctcttccattggaa |
18870606 |
T |
|
| Q |
731 |
acttacagatggagcatgttggtaatgaggtatggaatgaattataccaaaggtcattttttcaagaagt |
800 |
Q |
| |
|
| ||| || |||||||||||||| |||| || |||||||||||||| | || ||||||||||||||||| |
|
|
| T |
18870607 |
atttagaggtggagcatgttggtcatgaagtgtggaatgaattatatgagagatcattttttcaagaagt |
18870676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 16781465 - 16781422
Alignment:
| Q |
34 |
cattttgacttgaaaatatgggtgtgtgtttcggatgatttcag |
77 |
Q |
| |
|
|||||||| |||||||||||||| |||||||| ||||||||||| |
|
|
| T |
16781465 |
cattttgatttgaaaatatgggtttgtgtttcagatgatttcag |
16781422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 108
Target Start/End: Complemental strand, 16844205 - 16844119
Alignment:
| Q |
22 |
agggtaaaaacacattttgacttgaaaatatgggtgtgtgtttcggatgatttcagtttgatgaaaattttagagtccatcctagaa |
108 |
Q |
| |
|
|||||||| || |||||| |||||||||||||| |||||||| |||||||| ||| ||||||| ||||| |||| ||| ||||| |
|
|
| T |
16844205 |
agggtaaatactcattttcctttgaaaatatgggtttgtgtttctgatgattttagtatgatgaagattttgcagtcgatcgtagaa |
16844119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0144 (Bit Score: 747; Significance: 0; HSPs: 1)
Name: scaffold0144
Description:
Target: scaffold0144; HSP #1
Raw Score: 747; E-Value: 0
Query Start/End: Original strand, 19 - 885
Target Start/End: Complemental strand, 37862 - 36996
Alignment:
| Q |
19 |
gaaagggtaaaaacacattttgacttgaaaatatgggtgtgtgtttcggatgatttcagtttgatgaaaattttagagtccatcctagaaaacaccattg |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
37862 |
gaaagggtaaaaacacattttgacttgaaaatatgggtgtgtgtttcggatgatttcagtttgatgaaaattttagagtccatcatagaaaacaccattg |
37763 |
T |
|
| Q |
119 |
gaaaaaacctagatctcttgtctttagagtcaaggnnnnnnnnggttcaagatattttgcaaaacaaaaggtatttgcttgttcttgatgatgtttggag |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37762 |
gaaaaaacctagatctcttgtctttagagtcaaggaaaaaaaaggttcaagatattttgcaaaacaaaaggtatttgcttgttcttgatgatgtttggag |
37663 |
T |
|
| Q |
219 |
tgaagaccaagagaaatggaataagttaaagtctttgttgcaacttggaaagaaaggtgcatcaattttggtcactaccagacttgagattgttgcatcc |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
37662 |
tgaagaccaagagaaatggaataagttaaagtctttgttgcaacttggaaagaaaggtgcatcaatattggtcactaccagacttcagattgttgcatcc |
37563 |
T |
|
| Q |
319 |
atcatgggaactaaggttcatcctttagcacagttatttgatgatgacatctggtctttgttcaaacaacatgcttttggagcaaatagagaagggcgtg |
418 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37562 |
atcatgggaactaaggttcatcctttagcacagttatctgatgatgacatctggtcgttgttcaaacaacatgcttttggagcaaatagagaagggcgtg |
37463 |
T |
|
| Q |
419 |
cagagcttgtggaaataggccaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggaagccttttgcgctttaaaagcgatga |
518 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37462 |
cagagcttgtggaaataggccaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggaagccttttgcgctttaaaagcgatga |
37363 |
T |
|
| Q |
519 |
acatcaatggatttctgtggtggaaagtgagttttggaatttagctgatgataaccatgtcatgtctgctttgagattgagctactttaacttgaaattg |
618 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
37362 |
acatcaatggatttctgtggtggaaagtgagttttggaatttagctgatgataaccaagtcatgtctgctttgagactgagctactttaacttgaaattg |
37263 |
T |
|
| Q |
619 |
tcattgaggccatgttttactttttgtgctgtttttcctaaggatttagaaatggataaggaagaactcattcaactttggatggctaatggacttgttg |
718 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| | |||||||||||||||||||||||||||||||||| |
|
|
| T |
37262 |
tcattgaggccatgttttactttttgtgctgtttttcctaaggattttaaaatggtgaaggaaaatctcattcaactttggatggctaatggacttgttg |
37163 |
T |
|
| Q |
719 |
catctagaggaaacttacagatggagcatgttggtaatgaggtatggaatgaattataccaaaggtcattttttcaagaagttaaatcagattttgttgg |
818 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| | || |
|
|
| T |
37162 |
catctagaggaaacttacagatggagcatgttggtaatgaggtatggaatgaattatatcaaaggtcattttttcaagaagtcgaatcagatttagcagg |
37063 |
T |
|
| Q |
819 |
taacattacattcaaaattcatgattttatccatgatttaggtcagtcttttatgggagaagaatgt |
885 |
Q |
| |
|
|||||||||||||||||| |||||||| |||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
37062 |
taacattacattcaaaatgcatgatttagtccatgatttagctcagtctattatgggagaagaatgt |
36996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133 (Bit Score: 531; Significance: 0; HSPs: 3)
Name: scaffold0133
Description:
Target: scaffold0133; HSP #1
Raw Score: 531; E-Value: 0
Query Start/End: Original strand, 19 - 888
Target Start/End: Complemental strand, 13224 - 12352
Alignment:
| Q |
19 |
gaaagggtaaaaacacattttgacttgaaaatatgggtgtgtgtttcggatgatttcagtttgatgaaaattttagagtccatcctagaaaacaccattg |
118 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||| ||||| ||||||||| |
|
|
| T |
13224 |
gaaagtgtaaagacacattttgacttgaaaatatgggtgtgtgtttctgatgatttcagtatgatgaaggttttagagtccatcatagaagacaccattg |
13125 |
T |
|
| Q |
119 |
gaaaaaacctagatctcttgtctttagagtcaaggnnnnnnnnggttcaagatattttgcaaaacaaaaggtatttgcttgttcttgatgatgtttggag |
218 |
Q |
| |
|
||||||| | | |||||| ||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
13124 |
gaaaaaatccaaatctctcctctttagagtcaatgcgaaaaaaggttcaagaaattttgcaaaacaaaaggtatttgcttgttcttgatgatgtgtggag |
13025 |
T |
|
| Q |
219 |
tgaagaccaagagaaatggaataagttaaagtctttgttgcaacttggaaagaaaggtgcatcaattttggtcactaccagacttgagattgttgcatcc |
318 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
13024 |
tgaagaccaagagaaatggaataagttcaagtcttcgttgcaacatggaaagaaaggtgcatcaattttggtcactaccagacttgacattgttgcatcc |
12925 |
T |
|
| Q |
319 |
atcatgggaacta---aggttcatcctttagcacagttatttgatgatgacatctggtctttgttcaaacaacatgcttttggagcaaatagagaagggc |
415 |
Q |
| |
|
|||||||||||| | | ||||| ||||||| |||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| || |
|
|
| T |
12924 |
atcatgggaacttctgatgctcatcatttagcaagcttatctgatgatgacatctggtctttgttcaaacaacaagcttttgtagcaaatagagaagagc |
12825 |
T |
|
| Q |
416 |
gtgcagagcttgtggaaataggccaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggaagccttttgcgctttaaaagcga |
515 |
Q |
| |
|
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||| ||| || |
|
|
| T |
12824 |
gtgcagagcttgtggcaataggcaaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattaggaagcagtttgtgctttacaagtga |
12725 |
T |
|
| Q |
516 |
tgaacatcaatggatttctgtggtggaaagtgagttttggaatttagctgatgataaccatgtcatgtctgctttgagattgagctactttaacttgaaa |
615 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||||| |||| |||| | | | | | ||||||||||||||||| | ||||| |||||||||||| |
|
|
| T |
12724 |
cgaacatcaatggatttctgtactagaaagtgagttttggagtttacctgaggttgatcctatcatgtctgctttgagactaagctattttaacttgaaa |
12625 |
T |
|
| Q |
616 |
ttgtcattgaggccatgttttactttttgtgctgtttttcctaaggatttagaaatggataaggaagaactcattcaactttggatggctaatggacttg |
715 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||| || |||| ||||||| |||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
12624 |
ttgtcattgaggccatgttttactttctgtgctgtttttcccaaagattatgaaatggtgaaggaaaatctcattcaactttggatggctaatggacttg |
12525 |
T |
|
| Q |
716 |
ttgcatctagaggaaacttacagatggagcatgttggtaatgaggtatggaatgaattataccaaaggtcattttttcaagaagttaaatcagattttgt |
815 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |
|
|
| T |
12524 |
ttacatctagaggaaacttacagatggagcatgttggtaatgaggtatggaatgaattataccaaaggtcattatttgaagaagttaaatcagattttgt |
12425 |
T |
|
| Q |
816 |
tggtaacattacattcaaaattcatgattttatccatgatttaggtcagtcttttatgggagaagaatgtatt |
888 |
Q |
| |
|
||||||||||| |||||||| ||||||||| |||||||||||| |||| |||||||||| ||||||||| |
|
|
| T |
12424 |
aggtaacattactttcaaaatgcatgattttgtccatgatttagcagtgtctattatgggagatgaatgtatt |
12352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133; HSP #2
Raw Score: 474; E-Value: 0
Query Start/End: Original strand, 19 - 899
Target Start/End: Complemental strand, 8882 - 7999
Alignment:
| Q |
19 |
gaaagggtaaaaacacattttgacttgaaaatatgggtgtgtgtttcggatgatttcagtttgatgaaaattttagagtccatcctagaaaacaccattg |
118 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||| | |||| ||| | ||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
8882 |
gaaagggtaaagacacattttgacttgaaaatatgggtgtgtgtttctggtgatatcaatgcgatgaaagttttagagtccatcatagaaaacaccattg |
8783 |
T |
|
| Q |
119 |
gaaaaaacctagatctcttgtctttagagtcaaggnnnnnnnnggttcaagatattttgcaaaacaaaaggtatttgcttgttcttgatgatgtttggag |
218 |
Q |
| |
|
||||||| | | |||||| |||||||||||||| | ||||||||| ||||||||||| || |||||||| ||||||||||||||||| |||| |
|
|
| T |
8782 |
gaaaaaatccacatctctcgtctttagagtcaatgcaacaaaaggttcaagaaattttgcaaaaaaataggtatttacttgttcttgatgatgtgtggac |
8683 |
T |
|
| Q |
219 |
tgaagaccaagagaaatggaataagttaaagtctttgttgcaacttggaaagaaaggtgcatcaattttggtcactaccagacttgagattgttgcatcc |
318 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |
|
|
| T |
8682 |
tgaagacaaagagaaatggaataagttaaagtctttgttgctaaatggaaagaaaggtgcatcaattttgatcactaccagacttgacattgttgcatcc |
8583 |
T |
|
| Q |
319 |
atcatgggaacta---aggttcatcctttagcacagttatttgatgatgacatctggtctttgttcaaacaacatgcttttggagcaaatagagaagggc |
415 |
Q |
| |
|
|||||||||||| | | ||||| ||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||| |||| |||||| || |
|
|
| T |
8582 |
atcatgggaacttctgatgctcatcatttagcaagcttatctgatgatgacatctggtctttgttcaaacaacaagcttttggagaaaatcgagaagagc |
8483 |
T |
|
| Q |
416 |
gtgcagagcttgtggaaataggccaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggaagccttttgcgctttaaaagcga |
515 |
Q |
| |
|
||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||| || |||| | |
|
|
| T |
8482 |
gtgcagagcttgtggcaataggcaaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggtagcagtttgtgctgtacaagcaa |
8383 |
T |
|
| Q |
516 |
tgaacatcaatggatttctgtggtggaaagtgagttttggaatttagctgatgataaccatgtcatgtctgctttgagattgagctactttaacttgaaa |
615 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||| |||| | | | | ||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
8382 |
cgaacatcaatggatttctgtactggaaagtgaattttggaatttgcctgaggttgattctatcatgtctgctttgagaataagctactttaacttgaaa |
8283 |
T |
|
| Q |
616 |
ttgtcattgaggccatgttttactttttgtgctgtttttcctaaggatttagaaatggataaggaagaactcattcaactttggatggctaatggacttg |
715 |
Q |
| |
|
||||||||||| ||||||||| |||| ||||||||||||||||||| ||| ||||||| ||||||| | |||||||| ||||||||||||||||| |||| |
|
|
| T |
8282 |
ttgtcattgagaccatgttttgctttctgtgctgtttttcctaagggttttgaaatggttaaggaaaatctcattcatctttggatggctaatggtcttg |
8183 |
T |
|
| Q |
716 |
ttgcatctagaggaaacttacagatggagcatgttggtaatgaggtatggaatgaattataccaaaggtcattttttcaagaagttaaatcagattttgt |
815 |
Q |
| |
|
|| ||||||||||||| |||||||||||||| |||||| |||||||||||||| |||| | ||||| ||||||||||||||||||||||| ||||| | |
|
|
| T |
8182 |
ttacatctagaggaaatttacagatggagcacgttggtgatgaggtatggaatcaattgtggcaaagatcattttttcaagaagttaaatctgatttagc |
8083 |
T |
|
| Q |
816 |
tggtaacattacattcaaaattcatgattttatccatgatttaggtcagtcttttatgggagaagaatgtattccttatgatgt |
899 |
Q |
| |
|
||||||||||||||| ||| |||||||||||||||||||||| ||||||| |||||| | ||||||||||| |||||||||| |
|
|
| T |
8082 |
aggtaacattacattccgaatgcatgattttatccatgatttagctcagtctattatggaaaaagaatgtatttcttatgatgt |
7999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133; HSP #3
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 352 - 885
Target Start/End: Complemental strand, 18094 - 17561
Alignment:
| Q |
352 |
ttatttgatgatgacatctggtctttgttcaaacaacatgcttttggagcaaatagagaagggcgtgcagagcttgtggaaataggccaaaagttagtga |
451 |
Q |
| |
|
|||| |||||||||||| ||||| || || |||||||||||| ||||| ||||| | || | ||| |||||||||| | |||||| | || |||||| |
|
|
| T |
18094 |
ttatatgatgatgacatttggtcattatttaaacaacatgctgttggaccaaatggggaggagcgcgcagagcttgcagcaataggtaaggagatagtga |
17995 |
T |
|
| Q |
452 |
gaaaatgtgtgggttcacctcttgctgctaaagtattgggaagccttttgcgctttaaaagcgatgaacatcaatggatttctgtggtggaaagtgagtt |
551 |
Q |
| |
|
||||||| |||||||||||||||||||| || || |||||||||||| ||||||||||||| || |||||||||||| ||||||| |||||||||| | |
|
|
| T |
17994 |
gaaaatgcgtgggttcacctcttgctgccaaggttttgggaagccttctgcgctttaaaagtgaggaacatcaatggctttctgtaaaggaaagtgaggt |
17895 |
T |
|
| Q |
552 |
ttggaatttagctgatgataaccatgtcatgtctgctttgagattgagctactttaacttgaaattgtcattgaggccatgttttactttttgtgctgtt |
651 |
Q |
| |
|
|||||||||| |||| ||||||| | | ||||||||||||||| | ||||||||||| ||||||| ||| |||||||| ||||||||||||||| ||||| |
|
|
| T |
17894 |
ttggaatttatctgaggataaccctataatgtctgctttgagactaagctactttaatttgaaatcgtccttgaggccctgttttactttttgtactgtt |
17795 |
T |
|
| Q |
652 |
tttcctaaggatttagaaatggataaggaagaactcattcaactttggatggctaatggacttgttgcatctagaggaaacttacagatggagcatgttg |
751 |
Q |
| |
|
|||||||||||||| ||||||| |||||| | |||||| | ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
17794 |
tttcctaaggattttgaaatggtgaaggaaaatatcattccattttggatggctaatggacttgttacatcaagaggaaacttacagatggagcatgttg |
17695 |
T |
|
| Q |
752 |
gtaatgaggtatggaatgaattataccaaaggtcattttttcaagaagttaaatcagattttgttggtaacattacattcaaaattcatgattttatcca |
851 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||| |||||||| |||| |
|
|
| T |
17694 |
gtaatgaggtatggaatgaattaaaccaaaggtcattctttcaagaagtcaaatcagattttgtaggtaacattacattcaaaatgcatgatttagtcca |
17595 |
T |
|
| Q |
852 |
tgatttaggtcagtcttttatgggagaagaatgt |
885 |
Q |
| |
|
|||||||| ||| || |||| |||||||||||| |
|
|
| T |
17594 |
tgatttagctcattccattattggagaagaatgt |
17561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 345; Significance: 0; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 270 - 885
Target Start/End: Original strand, 38939396 - 38940014
Alignment:
| Q |
270 |
gaaaggtgcatcaattttggtcactaccagacttgagattgttgcatccatcatgggaactaag---gttcatcctttagcacagttatttgatgatgac |
366 |
Q |
| |
|
|||||| ||||| ||||| ||||| || |||||||||||||||||||||||||||||||| | | ||| | ||| | | |||| |||||| ||| |
|
|
| T |
38939396 |
gaaaggggcatctattttagtcacaacacgacttgagattgttgcatccatcatgggaactcaccctgctcaccatttggtaggtttatatgatgacgac |
38939495 |
T |
|
| Q |
367 |
atctggtctttgttcaaacaacatgcttttggagcaaatagagaagggcgtgcagagcttgtggaaataggccaaaagttagtgagaaaatgtgtgggtt |
466 |
Q |
| |
|
|| ||||| || || |||||||||||||||||| || || | |||| || |||||||||||| | ||||||| | || ||||||||||||||||||||| |
|
|
| T |
38939496 |
atttggtcattatttaaacaacatgcttttggaccagatggggaagagcatgcagagcttgtagcaataggcaaggagatagtgagaaaatgtgtgggtt |
38939595 |
T |
|
| Q |
467 |
cacctcttgctgctaaagtattgggaagccttttgcgctttaaaagcgatgaacatcaatggatttctgtggtggaaagtgagttttggaatttagctga |
566 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||| ||||||| |||||||||| ||||||||||| |||| |
|
|
| T |
38939596 |
cacctcttgctgccaaagtattgggaagccttttgcgctttaaaagtgaggaacatcaatggttttctgtaaaggaaagtgagctttggaatttatctga |
38939695 |
T |
|
| Q |
567 |
tgataaccatgtcatgtctgctttgagattgagctactttaacttgaaattgtcattgaggccatgttttactttttgtgctgtttttcctaaggattta |
666 |
Q |
| |
|
||||||| | ||||||||||||||||| | ||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
38939696 |
ggataaccctatcatgtctgctttgagactaagctactttaatttgaaattgtccttgaggccatgttttaatttttgtgctgtttttcctaaggatttt |
38939795 |
T |
|
| Q |
667 |
gaaatggataaggaagaactcattcaactttggatggctaatggacttgttgcatctagaggaaacttacagatggagcatgttggtaatgaggtatgga |
766 |
Q |
| |
|
||||||| |||||| | ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38939796 |
gaaatggtgaaggaaaatctcattcaactttggatggctaatggacttgttacatcaagaggaaacttacagatggagcatgttggtaatgaggtatgga |
38939895 |
T |
|
| Q |
767 |
atgaattataccaaaggtcattttttcaagaagttaaatcagattttgttggtaacattacattcaaaattcatgattttatccatgatttaggtcagtc |
866 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||| |||||| |
|
|
| T |
38939896 |
atgaattataccaaaggtcattttttcaagaagtcaaatcagattttgtaggtaacattacattcaaaatgcatgatttaatccatgatttagctcagtc |
38939995 |
T |
|
| Q |
867 |
ttttatgggagaagaatgt |
885 |
Q |
| |
|
| | ||||||||||||||| |
|
|
| T |
38939996 |
tgtaatgggagaagaatgt |
38940014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 252; E-Value: 1e-139
Query Start/End: Original strand, 162 - 885
Target Start/End: Original strand, 7053189 - 7053921
Alignment:
| Q |
162 |
ggttcaagatattttgcaaaacaaaaggtatttgcttgttcttgatgatgtttggagtgaagaccaagagaaatggaataagttaaagtctttgttgca- |
260 |
Q |
| |
|
||||||||| ||||||||| |||||||||||| ||||| | ||||||||||||| ||||||||| | |||||| | ||||| |||| ||||||||| |
|
|
| T |
7053189 |
ggttcaagaagttttgcaaagcaaaaggtatttacttgtattagatgatgtttggaatgaagaccatggtaaatggtacaagttcaagtttttgttgcag |
7053288 |
T |
|
| Q |
261 |
-----acttggaaagaaaggtgcatcaattttggtcactaccagacttgagattgttgcatccatcatgggaactaaggt---tcatcctttagcacagt |
352 |
Q |
| |
|
| || || ||||||| |||||||||| |||||||| |||||||| ||||||||||| |||||||||||| | ||||| ||||| | | |
|
|
| T |
7053289 |
tctgcaattacaaggaaaggttcatcaattttagtcactacaagacttgaaattgttgcatctatcatgggaactcaaccccgtcatcttttagtaggtt |
7053388 |
T |
|
| Q |
353 |
tatttgatgatgacatctggtctttgttcaaacaacatgcttttggagcaaatagagaagggcgtgcagagcttgtggaaataggccaaaagttagtgag |
452 |
Q |
| |
|
||| |||||||||||| ||| ||||||||||||| | |||||||| ||||| |||||| || ||||||||||| ||||||| | || ||||||| |
|
|
| T |
7053389 |
tatctgatgatgacatttggcctttgttcaaacactgtacttttggaccaaatggagaagagcatgcagagcttgccacaataggcaaggagatagtgag |
7053488 |
T |
|
| Q |
453 |
aaaatgtgtgggttcacctcttgctgctaaagtattgggaagccttttgcgctttaaaagcgatgaacatcaatggatttctgtggtggaaagtgagttt |
552 |
Q |
| |
|
|||||||||||||||||||||||| || |||||||| ||||||||||| || |||||| | || ||||||||||| ||||| | |||||| ||||| |
|
|
| T |
7053489 |
aaaatgtgtgggttcacctcttgcagcaaaagtattaggaagccttttacgatttaaacgtgagaaacatcaatggctttctataaaggaaagcaagttt |
7053588 |
T |
|
| Q |
553 |
tggaatttagctgatgataaccatgtcatgtctgctttgagattgagctactttaacttgaaattgtcattgaggccatgttttactttttgtgctgttt |
652 |
Q |
| |
|
||||||||| |||| ||||| | |||||||||||||||| ||||||||| ||| ||||||||| |||||||||| |||||| ||||||||||||||| |
|
|
| T |
7053589 |
tggaatttatctgaggataatccaatcatgtctgctttgaggctgagctactataatttgaaattgccattgaggccttgtttttctttttgtgctgttt |
7053688 |
T |
|
| Q |
653 |
ttcctaaggatttagaaatggataaggaagaactcattcaactttggatggctaatggacttgttgcatctagaggaaacttacagatggagcatgttgg |
752 |
Q |
| |
|
|||| || ||||| || || |||||||| |||||||| ||||||||||||||||||||| || ||||||||||||| ||||||||||||| | |||| |
|
|
| T |
7053689 |
ttcccaaagattttgagatacataaggaatgcctcattcatctttggatggctaatggacttcttacatctagaggaaatttacagatggagcttcttgg |
7053788 |
T |
|
| Q |
753 |
taatgaggtatggaatgaattataccaaaggtcattttttcaagaagttaaatcagattttgttggtaacattacattcaaaattcatgattttatccat |
852 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||| | || || ||||||||||| ||||| |||||||| | ||| |
|
|
| T |
7053789 |
taatgaggtatggaatgaattatatcaaagatcattttttcaagaagttaaatctgatatagtagggaacattacatttaaaatgcatgatttggttcat |
7053888 |
T |
|
| Q |
853 |
gatttaggtcagtcttttatgggagaagaatgt |
885 |
Q |
| |
|
||||||| |||||| ||||||||||||||||| |
|
|
| T |
7053889 |
gatttagctcagtccattatgggagaagaatgt |
7053921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 77
Target Start/End: Original strand, 7053061 - 7053104
Alignment:
| Q |
34 |
cattttgacttgaaaatatgggtgtgtgtttcggatgatttcag |
77 |
Q |
| |
|
||||||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
7053061 |
cattttgacttgaaaatatgggtttgtgtttcagatgatttcag |
7053104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 38939154 - 38939209
Alignment:
| Q |
34 |
cattttgacttgaaaatatgggtgtgtgtttcggatgatttcagtttgatgaaaat |
89 |
Q |
| |
|
|||||||| |||||||||||||| |||||||| ||||||||||| |||||||||| |
|
|
| T |
38939154 |
cattttgatttgaaaatatgggtttgtgtttcagatgatttcagcatgatgaaaat |
38939209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 630 - 725
Target Start/End: Original strand, 25293660 - 25293755
Alignment:
| Q |
630 |
atgttttactttttgtgctgtttttcctaaggatttagaaatggataaggaagaactcattcaactttggatggctaatggacttgttgcatctag |
725 |
Q |
| |
|
||||||| ||||||||||| | ||||| || ||| | |||| |||||||||||| | | ||| |||||||||||||||||| || || ||||||| |
|
|
| T |
25293660 |
atgttttgctttttgtgctatgtttccaaaagatacaaaaatcgataaggaagaattgactcatctttggatggctaatggatttatttcatctag |
25293755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 307; Significance: 1e-172; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 307; E-Value: 1e-172
Query Start/End: Original strand, 163 - 885
Target Start/End: Complemental strand, 13378328 - 13377598
Alignment:
| Q |
163 |
gttcaagatattttgcaaaacaaaaggtatttgcttgttcttgatgatgtttggagtgaagaccaagagaaatggaataagttaaagtctttgttgcaac |
262 |
Q |
| |
|
|||||||| ||||||||| |||||||||||| ||||| || |||||||| |||| ||||||||| | |||||| | ||||| |||| |||||||||| |
|
|
| T |
13378328 |
gttcaagaagttttgcaaagcaaaaggtatttacttgtactagatgatgtgtggaatgaagaccatgttaaatgggaaaagttcaagtttttgttgcaat |
13378229 |
T |
|
| Q |
263 |
ttgg------aaagaaaggtgcatcaattttggtcactaccagacttgagattgttgcatccatcatgggaactaag---gttcatcctttagcacagtt |
353 |
Q |
| |
|
||| || |||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||| | | ||||| ||| | | || |
|
|
| T |
13378228 |
gtggcattacaaggaaaggatcatcaattttagtcactacgcgacttgagattgttgcatccatcatgggaactcaccctgctcatcatttggtaggatt |
13378129 |
T |
|
| Q |
354 |
atttgatgatgacatctggtctttgttcaaacaacatgcttttggagcaaatagagaagggcgtgcagagcttgtggaaataggccaaaagttagtgaga |
453 |
Q |
| |
|
| |||||| ||||| ||||||||||| |||| ||||||| ||||| | ||| | |||| |||||||||||||| | ||||||| | || |||||||| |
|
|
| T |
13378128 |
acatgatgaagacatttggtctttgtttaaactacatgctattggacctaatggggaagagcgtgcagagcttgcagcaataggcaaggagatagtgaga |
13378029 |
T |
|
| Q |
454 |
aaatgtgtgggttcacctcttgctgctaaagtattgggaagccttttgcgctttaaaagcgatgaacatcaatggatttctgtggtggaaagtgagtttt |
553 |
Q |
| |
|
|||||||||||||||||||||||||| || || ||||||||||||| |||||||||||| || |||||||||||| ||||||| ||||||| || ||| |
|
|
| T |
13378028 |
aaatgtgtgggttcacctcttgctgccaaggttttgggaagcctttcgcgctttaaaagtgaggaacatcaatggctttctgtaaaggaaagtaagcttt |
13377929 |
T |
|
| Q |
554 |
ggaatttagctgatgataaccatgtcatgtctgctttgagattgagctactttaacttgaaattgtcattgaggccatgttttactttttgtgctgtttt |
653 |
Q |
| |
|
|||||||| |||| ||||||| | ||||||||||||||||| | ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
13377928 |
ggaatttatctgaggataaccctatcatgtctgctttgagactaagctactttaatttgaaattgtccttgaggccatgttttactttttgtgctgtttt |
13377829 |
T |
|
| Q |
654 |
tcctaaggatttagaaatggataaggaagaactcattcaactttggatggctaatggacttgttgcatctagaggaaacttacagatggagcatgttggt |
753 |
Q |
| |
|
|||||||||||| ||||||| |||||| | ||||||| ||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||| |
|
|
| T |
13377828 |
tcctaaggattttgaaatggtgaaggaaaatctcattctactttggatggctaatggacttgttacatctagaggaaacttaca-acggagcatgttggt |
13377730 |
T |
|
| Q |
754 |
aatgaggtatggaatgaattataccaaaggtcattttttcaagaagttaaatcagattttgttggtaacattacattcaaaattcatgattttatccatg |
853 |
Q |
| |
|
|||||||||||| |||| |||| |||||| ||||||||||||||||||||||||||| | || |||||||| ||||||||||| |||||||| |||||| |
|
|
| T |
13377729 |
aatgaggtatgggatgagttatgccaaagatcattttttcaagaagttaaatcagatgtggtaggtaacataacattcaaaatgcatgatttagtccatg |
13377630 |
T |
|
| Q |
854 |
atttaggtcagtcttttatgggagaagaatgt |
885 |
Q |
| |
|
|||||| ||| || | ||||||||||||||| |
|
|
| T |
13377629 |
atttagctcaatccataatgggagaagaatgt |
13377598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 13378454 - 13378402
Alignment:
| Q |
37 |
tttgacttgaaaatatgggtgtgtgtttcggatgatttcagtttgatgaaaat |
89 |
Q |
| |
|
|||||||||||||||||||| |||||||| |||||||||||| ||| |||||| |
|
|
| T |
13378454 |
tttgacttgaaaatatgggtttgtgtttctgatgatttcagtatgaagaaaat |
13378402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0256 (Bit Score: 262; Significance: 1e-145; HSPs: 3)
Name: scaffold0256
Description:
Target: scaffold0256; HSP #1
Raw Score: 262; E-Value: 1e-145
Query Start/End: Original strand, 448 - 881
Target Start/End: Complemental strand, 9094 - 8661
Alignment:
| Q |
448 |
gtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggaagccttttgcgctttaaaagcgatgaacatcaatggatttctgtggtggaaagtg |
547 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||| || |||||||||||| | ||||| |||||||| |
|
|
| T |
9094 |
gtgagaaaatgtgtgggttcacctcttgctgccaaagtattgggaagtcttttgtgctttaaaagtgaggaacatcaatggctctctgtcaaggaaagtg |
8995 |
T |
|
| Q |
548 |
agttttggaatttagctgatgataaccatgtcatgtctgctttgagattgagctactttaacttgaaattgtcattgaggccatgttttactttttgtgc |
647 |
Q |
| |
|
|| ||||||||||| |||| ||| | | | ||||||||||||||||| | ||||||||||| ||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
8994 |
agctttggaatttaactgaggatgatcctatcatgtctgctttgagactaagctactttaatttgaaattgtccttgagaccatgttttactttttgtgc |
8895 |
T |
|
| Q |
648 |
tgtttttcctaaggatttagaaatggataaggaagaactcattcaactttggatggctaatggacttgttgcatctagaggaaacttacagatggagcat |
747 |
Q |
| |
|
|||||||||||| ||||| |||||| |||||| | ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
8894 |
tgtttttcctaaagattttaaaatggtgaaggaaaatctcattcaactttggatggctaatggacttgttacatctagaggaaatttacagatggagcat |
8795 |
T |
|
| Q |
748 |
gttggtaatgaggtatggaatgaattataccaaaggtcattttttcaagaagttaaatcagattttgttggtaacattacattcaaaattcatgatttta |
847 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||| |||||||| ||||||||||| |||||||| |||||||| |
|
|
| T |
8794 |
gttggtaatgaggtatggaatgaattaaaccaaaggtcattctttcaagaagtcaaatccgattttgtaggtaacattactttcaaaatgcatgatttag |
8695 |
T |
|
| Q |
848 |
tccatgatttaggtcagtcttttatgggagaaga |
881 |
Q |
| |
|
|||||||||||| ||| ||| ||||||||||||| |
|
|
| T |
8694 |
tccatgatttagctcaatctgttatgggagaaga |
8661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0256; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 9268 - 9208
Alignment:
| Q |
270 |
gaaaggtgcatcaattttggtcactaccagacttgagattgttgcatccatcatgggaact |
330 |
Q |
| |
|
|||||||||||| ||||| ||||| || ||||||| |||||||||||||||||||||||| |
|
|
| T |
9268 |
gaaaggtgcatctattttagtcacaacacgacttgatattgttgcatccatcatgggaact |
9208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0256; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 9510 - 9455
Alignment:
| Q |
34 |
cattttgacttgaaaatatgggtgtgtgtttcggatgatttcagtttgatgaaaat |
89 |
Q |
| |
|
|||||||| |||||||||||||| |||||||| ||||||||||| |||||||||| |
|
|
| T |
9510 |
cattttgatttgaaaatatgggtttgtgtttcagatgatttcagcatgatgaaaat |
9455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0230 (Bit Score: 250; Significance: 1e-138; HSPs: 1)
Name: scaffold0230
Description:
Target: scaffold0230; HSP #1
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 19 - 887
Target Start/End: Complemental strand, 5054 - 4176
Alignment:
| Q |
19 |
gaaagggtaaaaacacattttgacttgaaaatatgggtgtgtgtttcggatgatttcagtttgatgaaaattttagagtccatcctagaaaacaccattg |
118 |
Q |
| |
|
||||||||| | ||||| ||| ||||||||||||||||||||||||| || ||||| | | |||||||| |||| |||||||| ||||| |||| || |
|
|
| T |
5054 |
gaaagggtagatacacactttaacttgaaaatatgggtgtgtgtttctgaggattttaatatgatgaaagttttgcagtccatcatagaatccaccgatg |
4955 |
T |
|
| Q |
119 |
gaaaaaacctagatctcttgtctttagagtcaaggnnnnnnnnggttcaagatattttgcaaaacaaaaggtatttgcttgttcttgatgatgtttggag |
218 |
Q |
| |
|
||||||| | |||||||| ||||||||| |||| | |||| || ||||||||||||||||||| ||| | ||||||||||||||||| |||| |
|
|
| T |
4954 |
gaaaaaatccagatctctcgtctttagaatcaatgcaaaagaaggttaaaaatattttgcaaaacaaaagatatctacttgttcttgatgatgtgtggaa |
4855 |
T |
|
| Q |
219 |
tgaagaccaagagaaatggaataagttaaagtctttgttgcaacttggaaa------gaaaggtgcatcaattttggtcactaccagacttgagattgtt |
312 |
Q |
| |
|
|||||||||||||||||||||| |||| |||| ||| |||||| |||||| ||||||||||||| |||||||||| ||||||||||| |||||| |
|
|
| T |
4854 |
tgaagaccaagagaaatggaatcagttcaagtattttctgcaacgtggaaatggcacgaaaggtgcatcagttttggtcacaaccagacttgacattgtt |
4755 |
T |
|
| Q |
313 |
gcatccatcatgggaactaag---gttcatcctttagcacagttatttgatgatgacatctggtctttgttcaaacaacatgcttttggagcaaatagag |
409 |
Q |
| |
|
||||| |||||||||||| | | ||||| ||| | |||| |||||||| |||||||| |||||| |||||| | ||||||| | ||||||||| |
|
|
| T |
4754 |
gcatcaatcatgggaacttatcctgctcatcatttgttaggcttatctgatgatgccatctggtatttgtttaaacaaaaagcttttgaaacaaatagag |
4655 |
T |
|
| Q |
410 |
aagggcgtgcagagcttgtggaaataggccaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggaagcc-ttttgcgcttta |
508 |
Q |
| |
|
||| ||||||||||||||||| ||||||| | ||||||||||||||||||||||||| ||||||||||| |||||| | ||||||| |||||||||||| |
|
|
| T |
4654 |
aagagcgtgcagagcttgtggcaataggcaaggagttagtgagaaaatgtgtgggttcgcctcttgctgccaaagtactaggaagcctttttgcgcttta |
4555 |
T |
|
| Q |
509 |
aaagcgatgaacatcaatggatttctgtggtggaaagtgagttttggaatttagctgatgataaccatgtcatgtctgctttgagattgagctactttaa |
608 |
Q |
| |
|
|||| || |||||||||||| ||||||| ||||||| ||||||||| ||| | || || || | | |||||| || ||||||| | ||||||||||| |
|
|
| T |
4554 |
aaagtgaggaacatcaatggctttctgtaaaggaaagtaagttttggagcttatccgaggacaatcctatcatgtttgttttgagactcagctactttaa |
4455 |
T |
|
| Q |
609 |
cttgaaattgtcattgaggccatgttttactttttgtgctgtttttcctaaggatttagaaatggataaggaagaactcattcaactttggatggctaat |
708 |
Q |
| |
|
|| ||||| ||| ||||||| ||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||| || || |||||| |||||||| |
|
|
| T |
4454 |
tttaaaattatcactgaggccgtgttttactttttgtgcggtttttcctaaggattttgaaatggtgaaggaagaactgatccatctttggttggctaat |
4355 |
T |
|
| Q |
709 |
ggacttgttgcatctagaggaaacttacagatggagcatgttggtaatgaggtatggaatgaattataccaaaggtcattttttcaagaagttaaatcag |
808 |
Q |
| |
|
||| | | | || ||||| ||| || |||||||||||||| |||| || |||||||||||||| || ||||||||||||||||| ||| | | |
|
|
| T |
4354 |
ggattcatctcttccgttggaaatttagaggtggagcatgttggtcatgaagtgtggaatgaattatatgcgagatcattttttcaagaagtaaaaactg |
4255 |
T |
|
| Q |
809 |
attttgttggtaacattacattcaaaattcatgattttatccatgatttaggtcagtcttttatgggagaagaatgtat |
887 |
Q |
| |
|
|| ||| | ||||||||||||| |||||||| || |||||||||| |||||| ||| |||||||||||||| |
|
|
| T |
4254 |
ataaaaagggtgaggttacattcaaaatgcatgatttaattcatgatttagctcagtccattacaggagaagaatgtat |
4176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0511 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: scaffold0511
Description:
Target: scaffold0511; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 19 - 887
Target Start/End: Complemental strand, 9734 - 8857
Alignment:
| Q |
19 |
gaaagggtaaaaacacattttgacttgaaaatatgggtgtgtgtttcggatgatttcagtttgatgaaaattttagagtccatcctagaaaacaccattg |
118 |
Q |
| |
|
||||||||| | ||||| ||| ||||||||||||||||||||||||| || ||||| | | |||||||| |||| |||||||| ||||| |||| || |
|
|
| T |
9734 |
gaaagggtagatacacactttaacttgaaaatatgggtgtgtgtttctgaggattttaatatgatgaaagttttgcagtccatcatagaatccaccgatg |
9635 |
T |
|
| Q |
119 |
gaaaaaacctagatctcttgtctttagagtcaaggnnnnnnnnggttcaagatattttgcaaaacaaaaggtatttgcttgttcttgatgatgtttggag |
218 |
Q |
| |
|
||||||| | |||||||| ||||||||| |||| | |||| || ||||||||||||| ||||| ||| | ||||||||||||||||| |||| |
|
|
| T |
9634 |
gaaaaaatccagatctctcgtctttagaatcaatgcaaaagaaggttaaaaatattttgcaaaataaaagatatctacttgttcttgatgatgtgtggat |
9535 |
T |
|
| Q |
219 |
tgaagaccaagagaaatggaataagttaaagtctttgttgcaacttggaaa------gaaaggtgcatcaattttggtcactaccagacttgagattgtt |
312 |
Q |
| |
|
|||||||||||||||||||||| |||| |||| ||| |||||| |||||| ||||||||||||| |||||||||| ||||||||||| |||||| |
|
|
| T |
9534 |
tgaagaccaagagaaatggaatcagttcaagtattttctgcaacgtggaaatggcacgaaaggtgcatcagttttggtcacaaccagacttgacattgtt |
9435 |
T |
|
| Q |
313 |
gcatccatcatgggaactaag---gttcatcctttagcacagttatttgatgatgacatctggtctttgttcaaacaacatgcttttggagcaaatagag |
409 |
Q |
| |
|
||||| |||||||||||| | | ||||| ||| | |||| |||||||| |||||||| |||||| |||||| | ||||||| | ||||||||| |
|
|
| T |
9434 |
gcatcaatcatgggaacttatcctgctcatcatttgttaggcttatctgatgatgccatctggtatttgtttaaacaaaaagcttttgaaacaaatagag |
9335 |
T |
|
| Q |
410 |
aagggcgtgcagagcttgtggaaataggccaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggaagccttttgcgctttaa |
509 |
Q |
| |
|
||| ||||||||||||||||| ||||||| | ||||||||||||||||||||||||| |||||||| || |||||| | ||||| |||||||||||||| |
|
|
| T |
9334 |
aagagcgtgcagagcttgtggcaataggcaaggagttagtgagaaaatgtgtgggttcgcctcttgccgccaaagtactaggaagtcttttgcgctttaa |
9235 |
T |
|
| Q |
510 |
aagcgatgaacatcaatggatttctgtggtggaaagtgagttttggaatttagctgatgataaccatgtcatgtctgctttgagattgagctactttaac |
609 |
Q |
| |
|
||| || |||||||||||| ||||||| ||| ||| ||||||||| ||| | || || || | | ||||||||| ||||||| | ||||||||||| |
|
|
| T |
9234 |
aagtgaggaacatcaatggctttctgtaaaggacagtaagttttggagcttatccgaggacaatcctatcatgtctgttttgagactcagctactttaat |
9135 |
T |
|
| Q |
610 |
ttgaaattgtcattgaggccatgttttactttttgtgctgtttttcctaaggatttagaaatggataaggaagaactcattcaactttggatggctaatg |
709 |
Q |
| |
|
|||||||| ||| ||||||| ||||||||||||||||| ||||||||||||||||| ||||||| ||||||| ||| || || |||||| ||||||||| |
|
|
| T |
9134 |
ttgaaattatcactgaggccgtgttttactttttgtgcggtttttcctaaggattttgaaatggtgaaggaagcactgatccatctttggttggctaatg |
9035 |
T |
|
| Q |
710 |
gacttgttgcatctagaggaaacttacagatggagcatgttggtaatgaggtatggaatgaattataccaaaggtcattttttcaagaagttaaatcaga |
809 |
Q |
| |
|
|| | | | || ||||| ||| || |||||||||||||| | || || |||||||||||||| || ||||||||||||||||| ||| | || |
|
|
| T |
9034 |
gattcatctcttccgttggaaatttagaggtggagcatgttggtcaagaagtgtggaatgaattatatgcgagatcattttttcaagaagtaaaaactga |
8935 |
T |
|
| Q |
810 |
ttttgttggtaacattacattcaaaattcatgattttatccatgatttaggtcagtcttttatgggagaagaatgtat |
887 |
Q |
| |
|
| ||| | ||||||||||||| |||||||| || |||||||||| |||||| ||| |||||||||||||| |
|
|
| T |
8934 |
taaaaagggtgaggttacattcaaaatgcatgatttaattcatgatttagctcagtccattacaggagaagaatgtat |
8857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 30207146 - 30207085
Alignment:
| Q |
376 |
ttgttcaaacaacatgcttttggagcaaatagagaagggcgtgcagagcttgtggaaatagg |
437 |
Q |
| |
|
|||||||||||| |||| |||||| ||||||||||| |||||||||||||||||||||||| |
|
|
| T |
30207146 |
ttgttcaaacaatatgcatttggacaaaatagagaagagcgtgcagagcttgtggaaatagg |
30207085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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