View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7182_low_16 (Length: 269)
Name: NF7182_low_16
Description: NF7182
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7182_low_16 |
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Alignment Details
Target: chr6 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 13 - 267
Target Start/End: Original strand, 8349361 - 8349615
Alignment:
| Q |
13 |
agaagagtagctaggtcattgtaatggccatttggacagttgaattgtttgtagtttcctgattttccatttgtaggacacattgatagatcatcacatg |
112 |
Q |
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| T |
8349361 |
agaagagtagctaggtcattgtaatggccatttggacagttgaattgtttgtagtttcctgattttccatttgtaggacacattgatagatcatcacatg |
8349460 |
T |
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| Q |
113 |
gtgtacattttactaggaatggtagaccatattgacatgctgatgtgaagattgatactgagagacttagaagaagcttgtatatttttcctttcctgca |
212 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8349461 |
gtgtacattttactaggaatggaagaccatattgacatgctgatgtgaagattgatactgagagacttagaagaagcttgtatatttttcctttcctgca |
8349560 |
T |
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| Q |
213 |
ataaagtaaaaattatcatcattaatcacatactctacagataagtctatttgag |
267 |
Q |
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|||||||||||||| | ||||||||||||||| |||| ||| |||| ||||||| |
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| T |
8349561 |
ataaagtaaaaattctaatcattaatcacataatctaaagaaaagttaatttgag |
8349615 |
T |
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