View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7184_low_12 (Length: 223)
Name: NF7184_low_12
Description: NF7184
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7184_low_12 |
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Alignment Details
Target: chr2 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 22858592 - 22858416
Alignment:
| Q |
1 |
acaaaccggcaacaactatttgaatcgtaacagtaactggaacgtagcgtgttaaatttgacggaaacataaacgaaaaaaggttcgttcccgaactcgg |
100 |
Q |
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| T |
22858592 |
acaaaccggcaacaactatttgaatcgtaacagtaactggaacgtagcgtgttaaatttgacggaaacataaacgaaaaaaggttcgttcccgaactcgg |
22858493 |
T |
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| Q |
101 |
aat---cttccttcttcagcgttaccatcatctctttcttctcttcaagccaagaatatttgtagcacactccaatt |
174 |
Q |
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||| ||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22858492 |
aatcttcttccttcttcggcgtcaccatcatcgctttcttctcttcaagccaagaatatttgtagcacactccaatt |
22858416 |
T |
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