View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7185_high_1 (Length: 367)
Name: NF7185_high_1
Description: NF7185
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7185_high_1 |
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Alignment Details
Target: chr6 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 17 - 324
Target Start/End: Complemental strand, 1783397 - 1783091
Alignment:
| Q |
17 |
aagaagaagttagtaaagtcttaaaaattggaatgtgaatataagannnnnnnagagtatcatgtgccataacatttgataatgttgactaaaagagata |
116 |
Q |
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| T |
1783397 |
aagaagaagttagtaaagtcttaaaaattggaatgtgaatataagatttttt-agagtatcatgtgccataacatttgataatgttgactaaaagagata |
1783299 |
T |
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| Q |
117 |
ccttgaactaaattttattttattttaaattagtcatatattcaaaatatgcagattttggagctaggcattgtgttacattcagtcattttagggatat |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1783298 |
ccttgaactaaattttattttattttaaattagtcatatattcaaaatatgcagattttggagctaggcattgtgttacattcagtcattttagggatat |
1783199 |
T |
|
| Q |
217 |
ctcttggggtgtcaagaagtcctaaaacaatcaaaccattggtggcagtattaacttttcatcaatgctttgaaggaataggacttggtggctgcatttc |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1783198 |
ctcttggggtgtcaagaagtcctaaaacaatcaaaccattggtggcagtattaacttttcatcaatgctttgaaggaataggacttggtggctgcatttc |
1783099 |
T |
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| Q |
317 |
tcaggtac |
324 |
Q |
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|||||||| |
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| T |
1783098 |
tcaggtac |
1783091 |
T |
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