View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7186_high_12 (Length: 251)
Name: NF7186_high_12
Description: NF7186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7186_high_12 |
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Alignment Details
Target: chr8 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 43886675 - 43886438
Alignment:
| Q |
1 |
gcaacaccccagctgctgttaggattgaaggttttgactgtcttagaagagataggaggagcaactgcagtatctctgctgttgcctaatgcaattttga |
100 |
Q |
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| T |
43886675 |
gcaacaccccagctgctgttaggattgaaggttttgactgtcttagaagagataggaggagcaactgtagtatctctgctgttgcctaatgcaattttga |
43886576 |
T |
|
| Q |
101 |
agaacagataatagataatagagagaactcaataccaagaatcagcagaggagnnnnnnngtttcctttggaaagaggatctaatcttaataattcactg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
43886575 |
agaacagataatagataatagagagaactcaataccaagaatcagcagaggagtttttttgtttcctttggaaagaggatctaatcttaataattcactg |
43886476 |
T |
|
| Q |
201 |
ttgttagagttactgtatgatgtatatagctgtgatgt |
238 |
Q |
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|||||||||||||||||||||||| ||||||| ||||| |
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| T |
43886475 |
ttgttagagttactgtatgatgtaaatagctgcgatgt |
43886438 |
T |
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