View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7186_low_5 (Length: 372)
Name: NF7186_low_5
Description: NF7186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7186_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 306; Significance: 1e-172; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 1 - 355
Target Start/End: Original strand, 35485080 - 35485435
Alignment:
| Q |
1 |
aatcaaactgaacaatttttctctgttcaattgattctctgaggaagataaatataaatagagctgcttgagctataaggttttcactaccttgcataga |
100 |
Q |
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| T |
35485080 |
aatcaaactgaacaatttttctctgttcaattgattctctgaggaagataaatataaatagagctgcttgagctataaggttttcactaccttgcataga |
35485179 |
T |
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| Q |
101 |
aacaccactaactaaccctaaacttatctcaaaaagaattattgagcttgttagaacaataagtgaatagttgatatttttaggggaataaacagttgaa |
200 |
Q |
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| T |
35485180 |
aacaccactaactaaccctaaacttatctcaaaaagaattattgagcttgttagaacaataagtgaatagttgatatttttaggggaataaacagttgaa |
35485279 |
T |
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| Q |
201 |
ttgtt-agtgtgaaccacaatcatctgttatttgattatttatttaggttaatcacaacnnnnnnnnnnnnnnaagcgaaatagtaataaaattaaaata |
299 |
Q |
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||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
35485280 |
ttgttaagtgtgaaccacaatcatctgttatttgattatttatttaggttaatcacaactttttaatttttttaagcgaaatagtaataaaattaaaata |
35485379 |
T |
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| Q |
300 |
aaaagggaacaaagataggaaagcaaaggacctgacacggtataaccacacaatca |
355 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35485380 |
aaaagggaacaaagataggaaagcaaaggacctgacacggtataaccacacaatca |
35485435 |
T |
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