View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7187_low_3 (Length: 218)

Name: NF7187_low_3
Description: NF7187
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7187_low_3
NF7187_low_3
[»] chr6 (20 HSPs)
chr6 (136-218)||(14846138-14846220)
chr6 (1-73)||(14846285-14846357)
chr6 (161-218)||(14174988-14175045)
chr6 (161-218)||(14179524-14179581)
chr6 (161-218)||(7515119-7515176)
chr6 (161-218)||(12170584-12170641)
chr6 (161-218)||(23128734-23128791)
chr6 (161-218)||(32327134-32327191)
chr6 (161-207)||(29319806-29319852)
chr6 (161-218)||(606320-606377)
chr6 (165-218)||(3913491-3913544)
chr6 (165-218)||(14801947-14802000)
chr6 (161-218)||(33053085-33053142)
chr6 (161-218)||(34018676-34018733)
chr6 (161-217)||(29255364-29255420)
chr6 (163-218)||(127787-127842)
chr6 (165-218)||(1523528-1523581)
chr6 (165-218)||(9380143-9380196)
chr6 (165-218)||(30776783-30776836)
chr6 (161-217)||(4010430-4010486)
[»] chr5 (24 HSPs)
chr5 (154-218)||(14726378-14726442)
chr5 (154-218)||(11976852-11976916)
chr5 (154-218)||(38007465-38007529)
chr5 (154-214)||(35850906-35850966)
chr5 (161-218)||(13007343-13007400)
chr5 (161-218)||(38597911-38597968)
chr5 (161-216)||(6012057-6012112)
chr5 (163-217)||(6217014-6217068)
chr5 (161-218)||(7930291-7930348)
chr5 (161-218)||(14082313-14082370)
chr5 (165-214)||(26878029-26878078)
chr5 (161-218)||(34945507-34945564)
chr5 (166-218)||(10722880-10722932)
chr5 (182-218)||(24229701-24229737)
chr5 (166-218)||(26825549-26825601)
chr5 (1-50)||(6012382-6012432)
chr5 (176-218)||(9113642-9113684)
chr5 (176-218)||(31391670-31391712)
chr5 (165-218)||(13422051-13422104)
chr5 (165-218)||(14211345-14211398)
chr5 (165-218)||(28540823-28540876)
chr5 (165-218)||(41630620-41630673)
chr5 (182-218)||(8096415-8096451)
chr5 (182-218)||(25980292-25980328)
[»] chr3 (32 HSPs)
chr3 (154-218)||(47041965-47042029)
chr3 (161-218)||(40556816-40556873)
chr3 (154-218)||(33579987-33580051)
chr3 (161-218)||(21533726-21533783)
chr3 (154-218)||(38545906-38545970)
chr3 (176-218)||(38860029-38860071)
chr3 (161-218)||(4711596-4711653)
chr3 (165-218)||(19619831-19619884)
chr3 (161-218)||(21431727-21431784)
chr3 (161-218)||(40487439-40487496)
chr3 (161-218)||(52923034-52923091)
chr3 (161-215)||(46304440-46304494)
chr3 (161-218)||(6954613-6954670)
chr3 (161-218)||(7448831-7448888)
chr3 (161-218)||(7456973-7457030)
chr3 (165-218)||(9998585-9998638)
chr3 (161-218)||(45568362-45568419)
chr3 (163-218)||(44959890-44959945)
chr3 (176-218)||(9173877-9173919)
chr3 (176-218)||(10229605-10229647)
chr3 (176-218)||(10233199-10233241)
chr3 (176-218)||(48650651-48650693)
chr3 (165-218)||(8914830-8914883)
chr3 (161-218)||(9797451-9797508)
chr3 (161-218)||(12050565-12050622)
chr3 (181-218)||(43017022-43017059)
chr3 (161-218)||(43488507-43488564)
chr3 (165-218)||(48199895-48199948)
chr3 (165-218)||(51303560-51303613)
chr3 (165-218)||(51923845-51923898)
chr3 (166-218)||(7546734-7546786)
chr3 (1-44)||(52923365-52923409)
[»] chr8 (27 HSPs)
chr8 (161-218)||(45445726-45445783)
chr8 (154-218)||(25190980-25191044)
chr8 (161-218)||(7883156-7883213)
chr8 (161-218)||(20553156-20553213)
chr8 (161-218)||(23230760-23230817)
chr8 (161-218)||(20559659-20559716)
chr8 (161-218)||(20571221-20571278)
chr8 (165-218)||(30568236-30568289)
chr8 (163-218)||(31013523-31013578)
chr8 (176-218)||(16928672-16928714)
chr8 (164-218)||(27110380-27110434)
chr8 (161-218)||(3673558-3673615)
chr8 (161-218)||(7677198-7677255)
chr8 (161-218)||(10377806-10377863)
chr8 (161-218)||(16247138-16247195)
chr8 (161-218)||(17693529-17693586)
chr8 (161-218)||(33214586-33214643)
chr8 (161-218)||(37971400-37971457)
chr8 (161-211)||(14544825-14544875)
chr8 (1-50)||(17693855-17693905)
chr8 (161-218)||(471081-471138)
chr8 (165-218)||(39657575-39657628)
chr8 (161-218)||(41684499-41684556)
chr8 (165-218)||(41896638-41896691)
chr8 (165-218)||(42046342-42046395)
chr8 (165-218)||(43833911-43833964)
chr8 (182-218)||(29939438-29939474)
[»] chr2 (23 HSPs)
chr2 (161-218)||(18763593-18763650)
chr2 (154-218)||(1415675-1415739)
chr2 (154-218)||(12677369-12677432)
chr2 (152-218)||(43397036-43397102)
chr2 (154-218)||(33923823-33923887)
chr2 (166-218)||(36692004-36692056)
chr2 (161-218)||(1421801-1421858)
chr2 (161-218)||(4778878-4778935)
chr2 (161-218)||(7646603-7646660)
chr2 (161-218)||(4100462-4100518)
chr2 (161-218)||(9169176-9169233)
chr2 (161-218)||(38445291-38445348)
chr2 (182-218)||(11985151-11985187)
chr2 (166-218)||(31210525-31210577)
chr2 (164-218)||(12554099-12554153)
chr2 (161-218)||(5427787-5427844)
chr2 (161-218)||(10929790-10929847)
chr2 (165-218)||(18107668-18107721)
chr2 (177-218)||(30399947-30399988)
chr2 (161-218)||(31128698-31128755)
chr2 (161-218)||(31788581-31788638)
chr2 (161-218)||(37876524-37876581)
chr2 (165-218)||(41694750-41694803)
[»] chr7 (21 HSPs)
chr7 (154-218)||(38798891-38798955)
chr7 (161-218)||(37837375-37837432)
chr7 (164-218)||(45349716-45349770)
chr7 (161-218)||(39171507-39171564)
chr7 (161-218)||(9450054-9450111)
chr7 (161-218)||(13796846-13796903)
chr7 (161-218)||(47590428-47590485)
chr7 (154-218)||(24770356-24770420)
chr7 (161-218)||(12141225-12141282)
chr7 (161-218)||(19296987-19297044)
chr7 (161-218)||(30756736-30756793)
chr7 (165-218)||(40993278-40993331)
chr7 (161-218)||(42978727-42978784)
chr7 (161-218)||(48316729-48316786)
chr7 (162-218)||(24069311-24069367)
chr7 (166-218)||(48061544-48061596)
chr7 (163-218)||(8001463-8001518)
chr7 (163-218)||(34899524-34899579)
chr7 (154-218)||(39328710-39328771)
chr7 (161-218)||(19404674-19404731)
chr7 (161-218)||(46700152-46700209)
[»] chr4 (25 HSPs)
chr4 (154-211)||(53444246-53444303)
chr4 (161-218)||(21686159-21686216)
chr4 (161-218)||(35348442-35348499)
chr4 (154-218)||(8670613-8670677)
chr4 (161-218)||(22611318-22611375)
chr4 (161-218)||(53811163-53811220)
chr4 (165-218)||(56040563-56040616)
chr4 (161-211)||(21662572-21662622)
chr4 (161-211)||(21671336-21671386)
chr4 (164-218)||(56156559-56156613)
chr4 (161-218)||(10496470-10496527)
chr4 (161-218)||(24098984-24099041)
chr4 (165-218)||(43510335-43510388)
chr4 (162-218)||(10258813-10258869)
chr4 (170-218)||(11299927-11299975)
chr4 (163-218)||(12199610-12199665)
chr4 (161-216)||(32766649-32766704)
chr4 (161-216)||(33921189-33921244)
chr4 (164-218)||(29120296-29120350)
chr4 (176-218)||(45418662-45418704)
chr4 (161-218)||(2520914-2520971)
chr4 (161-218)||(17949241-17949298)
chr4 (161-218)||(17953093-17953150)
chr4 (161-218)||(19853429-19853486)
chr4 (161-218)||(52944446-52944503)
[»] chr1 (25 HSPs)
chr1 (161-218)||(14872757-14872814)
chr1 (154-218)||(16989482-16989546)
chr1 (154-218)||(23291559-23291623)
chr1 (168-218)||(7836713-7836763)
chr1 (154-218)||(34878195-34878259)
chr1 (154-218)||(1742392-1742454)
chr1 (161-218)||(4413232-4413289)
chr1 (161-218)||(5983954-5984011)
chr1 (161-218)||(45415676-45415733)
chr1 (161-218)||(7337580-7337637)
chr1 (165-218)||(10776378-10776431)
chr1 (161-218)||(21947535-21947592)
chr1 (161-218)||(31984279-31984336)
chr1 (164-218)||(18939440-18939494)
chr1 (161-218)||(8211828-8211885)
chr1 (161-218)||(11462399-11462456)
chr1 (161-218)||(32679058-32679115)
chr1 (165-218)||(34413009-34413062)
chr1 (161-206)||(35461978-35462023)
chr1 (161-218)||(44915757-44915814)
chr1 (161-218)||(47133021-47133078)
chr1 (186-218)||(21687521-21687553)
chr1 (161-217)||(29738582-29738638)
chr1 (166-218)||(32395121-32395173)
chr1 (166-218)||(48750308-48750360)
[»] scaffold0445 (1 HSPs)
scaffold0445 (165-218)||(1463-1516)
[»] scaffold0127 (1 HSPs)
scaffold0127 (161-218)||(15607-15664)
[»] scaffold0050 (1 HSPs)
scaffold0050 (161-218)||(65959-66016)
[»] scaffold0017 (1 HSPs)
scaffold0017 (164-218)||(32664-32718)
[»] scaffold0347 (1 HSPs)
scaffold0347 (161-218)||(6145-6202)
[»] scaffold0121 (1 HSPs)
scaffold0121 (161-218)||(31191-31248)
[»] scaffold0088 (1 HSPs)
scaffold0088 (161-218)||(50891-50948)
[»] scaffold0049 (1 HSPs)
scaffold0049 (161-218)||(71217-71274)
[»] scaffold0884 (1 HSPs)
scaffold0884 (176-218)||(1890-1932)
[»] scaffold0262 (1 HSPs)
scaffold0262 (161-218)||(1736-1793)
[»] scaffold0009 (1 HSPs)
scaffold0009 (161-218)||(58005-58062)
[»] scaffold0026 (1 HSPs)
scaffold0026 (182-218)||(71787-71823)


Alignment Details
Target: chr6 (Bit Score: 79; Significance: 4e-37; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 136 - 218
Target Start/End: Complemental strand, 14846220 - 14846138
Alignment:
Q  136 ttgtgttgtttttgttgtttgaaggtccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14846220 ttgtgttgtttttgttgtttgaaggtccggaagcatgtgaattttggtgacttaggttttatcatattatttgtaggcatttt 14846138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 14846357 - 14846285
Alignment:
Q  1 aaactccaacttctctcttaactttcttctctttcgttcattgatgagggaacctagaatcactcctctatat 73  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  14846357 aaactccaacttctctcttaactttcttctctttcgttcattgatgagggaacctagagtcactcctctatat 14846285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 14175045 - 14174988
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||    
T  14175045 tccggaagcatgtgaatttcggtgacttatgttttatcatattatttgtaggcatttt 14174988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 14179581 - 14179524
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||    
T  14179581 tccggaagcatgtgaatttcggtgacttatgttttatcatattatttgtaggcatttt 14179524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 7515176 - 7515119
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||||| || | |||||||||||||| |||||||||||||||||||||||    
T  7515176 tccggaagcatgtgtatgtcggtgacttaggttttatcatattatttgtaggcatttt 7515119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 12170584 - 12170641
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| ||||| ||||||||||||||||||||||||||||||||    
T  12170584 tccggaagcatgggtatttcggtgatttaggtttgatcatattatttgtaggcatttt 12170641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 23128734 - 23128791
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| ||||||||| |||| |||||||||||||||||||||||    
T  23128734 tccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcatttt 23128791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 32327191 - 32327134
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | | |||||||| |||||||| |||||||||||||||||||||||    
T  32327191 tccggaagcatgagtagtttggtgatttaggttttatcatattatttgtaggcatttt 32327134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 29319852 - 29319806
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattattt 207  Q
    |||||||||||||| |||||||||||||| |||| ||||||||||||    
T  29319852 tccggaagcatgtgtattttggtgacttaagttttatcatattattt 29319806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 606320 - 606377
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||| |||| | |||| ||||||||| |||| |||||||||||||||||||||||    
T  606320 tccggaaacatgggtatttcggtgacttaagttttatcatattatttgtaggcatttt 606377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 3913544 - 3913491
Alignment:
Q  165 gaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||| | |||| ||||| |||||||| |||||||||||||||||||||||    
T  3913544 gaagcatgggtatttcggtgatttaggttttatcatattatttgtaggcatttt 3913491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 14801947 - 14802000
Alignment:
Q  165 gaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||| ||||| |||||||||| |||| ||| |||||||||||||||||||||||    
T  14801947 gaagaatgtgtattttggtgatttagatttcatcatattatttgtaggcatttt 14802000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 33053142 - 33053085
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | ||||  |||||||| |||| |||||||||||||||||||||||    
T  33053142 tccggaagcatgggtatttcagtgacttaagttttatcatattatttgtaggcatttt 33053085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 34018676 - 34018733
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | ||||  |||||||| |||| |||||||||||||||||||||||    
T  34018676 tccggaagcatgagtatttcagtgacttatgttttatcatattatttgtaggcatttt 34018733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 29255420 - 29255364
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcattt 217  Q
    ||||||| |||| | |||| |||||||||| ||| ||||||||||||||||||||||    
T  29255420 tccggaaacatgggtatttcggtgacttagattttatcatattatttgtaggcattt 29255364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 218
Target Start/End: Original strand, 127787 - 127842
Alignment:
Q  163 cggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||| | |||| ||||| |||| ||| |||||||||||||||||||||||    
T  127787 cggaagcatgagtatttcggtgatttagattttatcatattatttgtaggcatttt 127842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 1523528 - 1523581
Alignment:
Q  165 gaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||| | ||| |||||| |||| ||| |||||||||||||||||||||||    
T  1523528 gaagcatgggtattctggtgatttagattttatcatattatttgtaggcatttt 1523581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 9380143 - 9380196
Alignment:
Q  165 gaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||| | |||||||||| |||| ||| ||||||||||||||| |||||||    
T  9380143 gaagcatgggtattttggtgatttagattttatcatattatttgtatgcatttt 9380196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 30776783 - 30776836
Alignment:
Q  165 gaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||| | ||| |||||| |||| ||| |||||||||||||||||||||||    
T  30776783 gaagcatgggtattctggtgatttagattttatcatattatttgtaggcatttt 30776836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 4010486 - 4010430
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcattt 217  Q
    |||||||||||| | |||| ||||||||||  || |||||||||||| |||||||||    
T  4010486 tccggaagcatgagtatttcggtgacttagaatttatcatattatttataggcattt 4010430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 6e-24; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 14726442 - 14726378
Alignment:
Q  154 ttgaaggtccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14726442 ttgaagatccggaagcatgtgaattttggtgacttaggttttatcatattatttgtaggcatttt 14726378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 11976916 - 11976852
Alignment:
Q  154 ttgaaggtccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||| || |||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  11976916 ttgaagatctggaagcatgtgaatttcggtgacttaggttttatcatattatttgtaggcatttt 11976852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 38007465 - 38007529
Alignment:
Q  154 ttgaaggtccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||| ||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||    
T  38007465 ttgaagatccggaagcatgtgaatttcggtgaattaggttttatcatattatttgtaggcatttt 38007529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 35850906 - 35850966
Alignment:
Q  154 ttgaaggtccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggca 214  Q
    |||||| ||| ||||||||||||||| |||||||||||||| ||||||||||||| |||||    
T  35850906 ttgaagatccagaagcatgtgaatttcggtgacttaggttttatcatattatttgcaggca 35850966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 13007343 - 13007400
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| ||||||||| |||| |||||||||||||||||||||||    
T  13007343 tccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcatttt 13007400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 38597911 - 38597968
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | ||||  ||||||||||||| |||||||||||||||||||||||    
T  38597911 tccggaagcatgggtatttcagtgacttaggttttatcatattatttgtaggcatttt 38597968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 6012112 - 6012057
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatt 216  Q
    |||||||||||| | ||||  |||||||| ||||||||||||||||||||||||||    
T  6012112 tccggaagcatgggtatttcagtgacttaagtttgatcatattatttgtaggcatt 6012057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 6217014 - 6217068
Alignment:
Q  163 cggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcattt 217  Q
    |||||||||||| |||| |||||||||  ||| ||||||||||||||||||||||    
T  6217014 cggaagcatgtgtatttcggtgacttaaattttatcatattatttgtaggcattt 6217068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 7930291 - 7930348
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| |||  ||||||||| |||||||||||||||||||||||    
T  7930291 tccggaagcatgagtatttaggtttcttaggttttatcatattatttgtaggcatttt 7930348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 14082370 - 14082313
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | ||||   |||||||||||| |||||||||||||||||||||||    
T  14082370 tccggaagcatgggtatttcaatgacttaggttttatcatattatttgtaggcatttt 14082313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 26878078 - 26878029
Alignment:
Q  165 gaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggca 214  Q
    |||||||| | ||||||||||||||| ||| |||||||||||||||||||    
T  26878078 gaagcatgggtattttggtgacttagattttatcatattatttgtaggca 26878029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 34945507 - 34945564
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| ||||||||| |||| |||||||||||| ||||||||||    
T  34945507 tccggaagcatgggtatttcggtgacttaagttttatcatattatttataggcatttt 34945564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 10722880 - 10722932
Alignment:
Q  166 aagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||| | |||| |||||||||| ||| |||||||||||||||||||||||    
T  10722880 aagcatgggtatttcggtgacttagattttatcatattatttgtaggcatttt 10722932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 24229737 - 24229701
Alignment:
Q  182 gtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||||||||| |||||||||||||||||||||||    
T  24229737 gtgacttaggttttatcatattatttgtaggcatttt 24229701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 26825549 - 26825601
Alignment:
Q  166 aagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||||  |||| ||||||||| |||| |||||||||||||||||||||||    
T  26825549 aagcatgtttatttcggtgacttaagttttatcatattatttgtaggcatttt 26825601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 6012432 - 6012382
Alignment:
Q  1 aaactccaacttctctcttaactttc-ttctctttcgttcattgatgaggg 50  Q
    |||||||||||||||||| ||||||| ||||| |||||||||||| |||||    
T  6012432 aaactccaacttctctctaaactttctttctccttcgttcattgaggaggg 6012382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 9113684 - 9113642
Alignment:
Q  176 attttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  9113684 atttcggtgacttaagttttatcatattatttgtaggcatttt 9113642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 31391712 - 31391670
Alignment:
Q  176 attttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||| |||||||||||||| |||||||||| ||||||||||||    
T  31391712 atttcggtgacttaggttttatcatattatatgtaggcatttt 31391670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 13422051 - 13422104
Alignment:
Q  165 gaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||| |||| |||||||||  ||| |||||||||| ||||||||||||    
T  13422051 gaagcatgtgtatttcggtgacttatattttatcatattatatgtaggcatttt 13422104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 14211345 - 14211398
Alignment:
Q  165 gaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||| | ||| |||||| |||| ||| |||||||||||||||||||||||    
T  14211345 gaagcatgggtattctggtgatttagatttcatcatattatttgtaggcatttt 14211398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 28540876 - 28540823
Alignment:
Q  165 gaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||| | |||||||||| |||| ||| |||||||||||||||| ||||||    
T  28540876 gaagcatgggtattttggtgatttagatttcatcatattatttgtagacatttt 28540823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 41630620 - 41630673
Alignment:
Q  165 gaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||| ||||  ||||||||| ||| |||||||||||||||| ||||||    
T  41630620 gaagcatgtgtatttccgtgacttagattttatcatattatttgtagacatttt 41630673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 8096451 - 8096415
Alignment:
Q  182 gtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||| |||||||| |||||||||||||||||||||||    
T  8096451 gtgatttaggttttatcatattatttgtaggcatttt 8096415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 25980292 - 25980328
Alignment:
Q  182 gtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||| |||| |||||||||||||||||||||||    
T  25980292 gtgacttaagttttatcatattatttgtaggcatttt 25980328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 1e-21; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 47042029 - 47041965
Alignment:
Q  154 ttgaaggtccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  47042029 ttgaagatccggaagcatgtgaattttggtgacttaggtttcatcatattatttgtaggcgtttt 47041965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 40556816 - 40556873
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||    
T  40556816 tccggaagcatgtgtattttggtgacttaagttttatcatattatttgtaggcatttt 40556873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 33579987 - 33580051
Alignment:
Q  154 ttgaaggtccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||| |||||||||| |||||||| ||||| |||||||| |||||||||||||||||||||||    
T  33579987 ttgaagatccggaagcacgtgaatttcggtgatttaggttttatcatattatttgtaggcatttt 33580051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 21533783 - 21533726
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| |||||||||||||| |||||||||||||||||||||||    
T  21533783 tccggaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcatttt 21533726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 38545906 - 38545970
Alignment:
Q  154 ttgaaggtccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||| |||| || |||| |||||| |||||||||||||| |||||||||||||||||||||||    
T  38545906 ttgaagatccgaaaacatgcgaatttaggtgacttaggttttatcatattatttgtaggcatttt 38545970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 38860071 - 38860029
Alignment:
Q  176 attttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  38860071 attttggtgacttaggttttatcatattatttgtaggcatttt 38860029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 4711596 - 4711653
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| ||||||||| |||| |||||||||||||||||||||||    
T  4711596 tccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcatttt 4711653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 19619831 - 19619884
Alignment:
Q  165 gaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||| |||||| |||||||||| ||| |||||||||||||||||||||||    
T  19619831 gaagcatgagaatttcggtgacttagattttatcatattatttgtaggcatttt 19619884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 21431727 - 21431784
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| ||||||||| |||| |||||||||||||||||||||||    
T  21431727 tccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcatttt 21431784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 40487439 - 40487496
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||  | |||| |||||||||||||| |||||||||||||||||||||||    
T  40487439 tccggaagcataggtatttcggtgacttaggttttatcatattatttgtaggcatttt 40487496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 52923091 - 52923034
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| ||||||||| |||| |||||||||||||||||||||||    
T  52923091 tccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcatttt 52923034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 46304494 - 46304440
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcat 215  Q
    |||||||||||| | |||| |||||||||||||| |||||||||| |||||||||    
T  46304494 tccggaagcatgggtatttcggtgacttaggttttatcatattatatgtaggcat 46304440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 6954670 - 6954613
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| ||||||||| |||| |||| ||||||||||||||||||    
T  6954670 tccggaagcatgggtatttcggtgacttatgttttatcaaattatttgtaggcatttt 6954613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 7448888 - 7448831
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| ||||||||| |||| |||||||||||||||| ||||||    
T  7448888 tccggaagcatgagtatttcggtgacttaagtttcatcatattatttgtagacatttt 7448831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 7457030 - 7456973
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| ||||||||| |||| |||||||||||||||| ||||||    
T  7457030 tccggaagcatgagtatttcggtgacttaagtttcatcatattatttgtagacatttt 7456973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 9998585 - 9998638
Alignment:
Q  165 gaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||| | |||| ||||||||| |||| |||||||||||||||||||||||    
T  9998585 gaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcatttt 9998638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 45568419 - 45568362
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||||||||   |||| ||||| |||||||| |||||||||||||||||||||||    
T  45568419 tccggaagcatggatatttgggtgatttaggttttatcatattatttgtaggcatttt 45568362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 44959945 - 44959890
Alignment:
Q  163 cggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||| |||| | |||| ||||||||| |||| |||||||||||||||||||||||    
T  44959945 cggaatcatgggtatttcggtgacttaagttttatcatattatttgtaggcatttt 44959890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 9173877 - 9173919
Alignment:
Q  176 attttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||| | |||| |||||||||||||||||||||||||||    
T  9173877 attttggttatttagatttgatcatattatttgtaggcatttt 9173919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 10229605 - 10229647
Alignment:
Q  176 attttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  10229605 atttcggtgacttaagttttatcatattatttgtaggcatttt 10229647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 10233199 - 10233241
Alignment:
Q  176 attttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  10233199 atttcggtgacttaagttttatcatattatttgtaggcatttt 10233241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 48650693 - 48650651
Alignment:
Q  176 attttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  48650693 atttcggtgacttaagttttatcatattatttgtaggcatttt 48650651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 8914830 - 8914883
Alignment:
Q  165 gaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||| ||||| ||| |||||| |||| ||| |||||||||||||||||||||||    
T  8914830 gaagaatgtgtattctggtgatttagatttcatcatattatttgtaggcatttt 8914883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 9797508 - 9797451
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | ||||  |||| ||| |||| |||||||||||||||||||||||    
T  9797508 tccggaagcatgggtatttaagtgatttatgttttatcatattatttgtaggcatttt 9797451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 12050622 - 12050565
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||| |||| | |||| || ||||||||||| ||||||||||||||| |||||||    
T  12050622 tccggaaacatgagtatttcggggacttaggttttatcatattatttgtaagcatttt 12050565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 218
Target Start/End: Original strand, 43017022 - 43017059
Alignment:
Q  181 ggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||||||||||||||||||||||    
T  43017022 ggtgacttaggtgttatcatattatttgtaggcatttt 43017059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 43488564 - 43488507
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| ||||| |||||||| |||||||||||| ||||| ||||    
T  43488564 tccggaagcatgagtatttcggtgatttaggttttatcatattatttttaggcttttt 43488507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 48199895 - 48199948
Alignment:
Q  165 gaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||| |||| ||||||||||  || |||||||||| ||||||||||||    
T  48199895 gaagcatgtgcatttcggtgacttagaatttatcatattatctgtaggcatttt 48199948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 51303613 - 51303560
Alignment:
Q  165 gaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||| | ||| |||||| |||| ||| |||||||||||||||||||||||    
T  51303613 gaagcatgggtattctggtgatttagatttcatcatattatttgtaggcatttt 51303560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 51923845 - 51923898
Alignment:
Q  165 gaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||| | ||| |||||| |||| ||| |||||||||||||||||||||||    
T  51923845 gaagcatgggtattctggtgatttagatttcatcatattatttgtaggcatttt 51923898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 7546734 - 7546786
Alignment:
Q  166 aagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||| | ||| |||||| |||| ||| |||||||||||||||||||||||    
T  7546734 aagcatgggtattctggtgatttagatttcatcatattatttgtaggcatttt 7546786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 52923409 - 52923365
Alignment:
Q  1 aaactccaacttctctcttaactttc-ttctctttcgttcattga 44  Q
    |||||||||||||||||| ||||||| ||||| ||||||||||||    
T  52923409 aaactccaacttctctctaaactttctttctccttcgttcattga 52923365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 9e-20; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 45445783 - 45445726
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  45445783 tccggaagcatgtgaattttggtgacttagattttatcatattatttgtaggcatttt 45445726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 25191044 - 25190980
Alignment:
Q  154 ttgaaggtccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||| ||||||||||||||||||  | |||||||||||| |||||||||||||||||||||||    
T  25191044 ttgaagatccggaagcatgtgaattgcgatgacttaggttttatcatattatttgtaggcatttt 25190980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 7883213 - 7883156
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| |||||||||||||| |||||||||||||||||||||||    
T  7883213 tccggaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcatttt 7883156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 20553213 - 20553156
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| |||||||||||||| |||||||||||||||||||||||    
T  20553213 tccggaagcatgagtatttcggtgacttaggttttatcatattatttgtaggcatttt 20553156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 23230760 - 23230817
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| |||||||||||||| |||||||||||||||||||||||    
T  23230760 tccggaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcatttt 23230817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 20559716 - 20559659
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| |||||||||||||| |||||||||||||| ||||||||    
T  20559716 tccggaagcatgagtatttcggtgacttaggttttatcatattatttgtgggcatttt 20559659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 20571278 - 20571221
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| |||||||||||||| |||||||||||||| ||||||||    
T  20571278 tccggaagcatgagtatttcggtgacttaggttttatcatattatttgtgggcatttt 20571221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 30568289 - 30568236
Alignment:
Q  165 gaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||||||||||| | |||||||||||| ||||| |||||||||||||||||    
T  30568289 gaagcatgtgaatttcgatgacttaggttttatcatgttatttgtaggcatttt 30568236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 31013578 - 31013523
Alignment:
Q  163 cggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| ||||  |||||||| |||| |||||||||||||||||||||||    
T  31013578 cggaagcatgtgtatttcagtgacttaagttttatcatattatttgtaggcatttt 31013523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 16928714 - 16928672
Alignment:
Q  176 attttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||| |||||||||||||| |||||||||||||||||||||||    
T  16928714 atttcggtgacttaggttttatcatattatttgtaggcatttt 16928672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 27110434 - 27110380
Alignment:
Q  164 ggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||||||| ||||| ||||||||| ||| |||||||||||||||| ||||||    
T  27110434 ggaagcatgtgtattttagtgacttagattttatcatattatttgtagacatttt 27110380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 3673558 - 3673615
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | ||||  |||||||| |||| |||||||||||||||||||||||    
T  3673558 tccggaagcatgagtatttcagtgacttaagtttaatcatattatttgtaggcatttt 3673615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 7677255 - 7677198
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||||||||   |||| |||||||||||||| ||||||||||||||| |||||||    
T  7677255 tccggaagcatgaatatttcggtgacttaggttttatcatattatttgtaagcatttt 7677198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 10377806 - 10377863
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| || |||||| |||| |||||||||||||||||||||||    
T  10377806 tccggaagcatgggtatttcggcgacttaagttttatcatattatttgtaggcatttt 10377863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 16247195 - 16247138
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| | |||||||| ||||||||||||||||| |||||||||    
T  16247195 tccggaagcatgggtatttcgctgacttagatttgatcatattatttgaaggcatttt 16247138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 17693586 - 17693529
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| | ||||||| |||| |||||||||||||||||||||||    
T  17693586 tccggaagcatgagtatttcgatgacttatgttttatcatattatttgtaggcatttt 17693529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 33214643 - 33214586
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||||||||||||||| | ||||||| |||| |||||||||||| ||| ||||||    
T  33214643 tccggaagcatgtgaatttcgatgacttatgttttatcatattatttttagacatttt 33214586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 37971400 - 37971457
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||| |||| | |||| |||||||||||||| |||| ||||||||||||||||||    
T  37971400 tccggaaacatgagtatttcggtgacttaggttttatcacattatttgtaggcatttt 37971457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 14544875 - 14544825
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtag 211  Q
    |||||||||||| |||||| |||||||||  ||| ||||||||||||||||    
T  14544875 tccggaagcatgggaatttcggtgacttaaattttatcatattatttgtag 14544825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 17693905 - 17693855
Alignment:
Q  1 aaactccaacttctctcttaactttc-ttctctttcgttcattgatgaggg 50  Q
    |||||||||||||||||| ||||||| ||||| |||||||||||| |||||    
T  17693905 aaactccaacttctctctaaactttctttctccttcgttcattgaggaggg 17693855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 471138 - 471081
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | ||| || ||| |||| ||| |||||||||||||||||||||||    
T  471138 tccggaagcatgggtattctgatgatttagattttatcatattatttgtaggcatttt 471081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 39657575 - 39657628
Alignment:
Q  165 gaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||| | ||| |||||| |||| ||| |||||||||||||||||||||||    
T  39657575 gaagcatgggtattctggtgatttagatttcatcatattatttgtaggcatttt 39657628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 41684499 - 41684556
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||| ||||||| | |||| | |||||||| ||| |||||||||||||||||||||||    
T  41684499 tccgaaagcatgggtatttcgatgacttagattttatcatattatttgtaggcatttt 41684556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 41896638 - 41896691
Alignment:
Q  165 gaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||| | ||| |||||| |||| ||| |||||||||||||||||||||||    
T  41896638 gaagcatgagtattctggtgatttagatttcatcatattatttgtaggcatttt 41896691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 42046342 - 42046395
Alignment:
Q  165 gaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||| | ||| |||||| |||| ||| |||||||||||||||||||||||    
T  42046342 gaagcatgggtattctggtgatttagatttcatcatattatttgtaggcatttt 42046395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 43833964 - 43833911
Alignment:
Q  165 gaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||| | ||| |||||| |||| ||| |||||||||||||||||||||||    
T  43833964 gaagcatgagtattctggtgatttagtttttatcatattatttgtaggcatttt 43833911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 29939438 - 29939474
Alignment:
Q  182 gtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  29939438 gtgacttaggttttatcatattatttgtagtcatttt 29939474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 9e-20; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 18763593 - 18763650
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  18763593 tccggaagcatgtgaatttcggtgacttaggttttatcatattatttgtaggcatttt 18763650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 1415675 - 1415739
Alignment:
Q  154 ttgaaggtccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||| ||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||    
T  1415675 ttgaagatccggaagcatgtgaatttcggtgacttaggttttatcagattatttgtaggcatttt 1415739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 12677432 - 12677369
Alignment:
Q  154 ttgaaggtccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  12677432 ttgaagatccggaagcatgtgaattttggtgacttaggttttatcatatta-ttgtaggcatttt 12677369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 152 - 218
Target Start/End: Complemental strand, 43397102 - 43397036
Alignment:
Q  152 gtttgaaggtccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||| |||||||||||||||||||  ||||||||||||| ||||||||||||||| |||||||    
T  43397102 gtttgaagatccggaagcatgtgaatttcagtgacttaggttttatcatattatttgtacgcatttt 43397036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 33923823 - 33923887
Alignment:
Q  154 ttgaaggtccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||| ||||||||||||||||||| |||||||||||||| ||||||||||||| |||| ||||    
T  33923823 ttgaagatccggaagcatgtgaatttcggtgacttaggttttatcatattatttgcaggcgtttt 33923887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 36692004 - 36692056
Alignment:
Q  166 aagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||||| ||||| |||||||| |||||||||||||||||||||||    
T  36692004 aagcatgtgaatttcggtgatttaggttttatcatattatttgtaggcatttt 36692056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 1421801 - 1421858
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| ||||| |||||||| |||||||||||||||||||||||    
T  1421801 tccggaagcatgggtatttcggtgatttaggttttatcatattatttgtaggcatttt 1421858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 4778878 - 4778935
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| ||||||||| |||| |||||||||||||||||||||||    
T  4778878 tccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcatttt 4778935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 7646603 - 7646660
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| ||||||||| |||| |||||||||||||||||||||||    
T  7646603 tccggaagcatgagtatttcggtgacttaagttttatcatattatttgtaggcatttt 7646660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 4100462 - 4100518
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| ||||||||| |||| |||||||||||||||||||||||    
T  4100462 tccggaagcatg-gtatttcggtgacttaagttttatcatattatttgtaggcatttt 4100518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 9169233 - 9169176
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| ||||||||| || | |||||||||||||||||||||||    
T  9169233 tccggaagcatgggtatttcggtgacttaagtcttatcatattatttgtaggcatttt 9169176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 38445291 - 38445348
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||||| || | |||| ||||||||| |||| |||||||||||||||||||||||    
T  38445291 tccggaagcgtgggtatttcggtgacttaagttttatcatattatttgtaggcatttt 38445348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 11985187 - 11985151
Alignment:
Q  182 gtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||||||||| |||||||||||||||||||||||    
T  11985187 gtgacttaggttttatcatattatttgtaggcatttt 11985151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 31210577 - 31210525
Alignment:
Q  166 aagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||| | |||| ||||| |||||||| |||||||||||||||||||||||    
T  31210577 aagcatgggtatttcggtgatttaggttttatcatattatttgtaggcatttt 31210525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 12554153 - 12554099
Alignment:
Q  164 ggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||||| | ||||  || |||||||||| |||||||||||||||||||||||    
T  12554153 ggaagcatgagtatttcagtaacttaggttttatcatattatttgtaggcatttt 12554099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 5427844 - 5427787
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||| ||||| ||||  ||||||||||||| ||||||||||||| | |||||||    
T  5427844 tccggaagtatgtgtatttcagtgacttaggttttatcatattatttgcaagcatttt 5427787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 10929790 - 10929847
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||||| ||| |||||| |||  ||| |||||||||||| ||||||||||    
T  10929790 tccggaagcatgtgtattctggtgatttaaattttatcatattatttataggcatttt 10929847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 18107721 - 18107668
Alignment:
Q  165 gaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||| |||| | ||||||||  || |||||||||||||||||||||||    
T  18107721 gaagcatgtgtatttcgatgacttagaattaatcatattatttgtaggcatttt 18107668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 30399988 - 30399947
Alignment:
Q  177 ttttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||| ||||||||| ||| |||||||||||||||||||||||    
T  30399988 ttttagtgacttagattttatcatattatttgtaggcatttt 30399947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 31128755 - 31128698
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | ||||  ||||||||  ||| |||||||||||||||||||||||    
T  31128755 tccggaagcatgagtatttcagtgacttatattttatcatattatttgtaggcatttt 31128698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 31788581 - 31788638
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||| ||||||| | ||||  ||||||||||||| | |||||||||||||||||||||    
T  31788581 tccgaaagcatgagtatttcagtgacttaggttttaacatattatttgtaggcatttt 31788638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 37876581 - 37876524
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||| ||||||| | |||| |||||||||  ||| |||||||||||||||||||||||    
T  37876581 tccgaaagcatgggtatttcggtgacttaaattttatcatattatttgtaggcatttt 37876524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 41694750 - 41694803
Alignment:
Q  165 gaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||  ||| ||||||||||| ||| |||||||||||| ||||||||||    
T  41694750 gaagcatgtagattctggtgacttagattttatcatattatttataggcatttt 41694803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 3e-19; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 38798891 - 38798955
Alignment:
Q  154 ttgaaggtccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||| ||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||    
T  38798891 ttgaagatccggaagcatgtgaatttcggtgacttagattttatcatattatttgtaggcatttt 38798955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 37837432 - 37837375
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||    
T  37837432 tccggaagcatgtgaatttcggtgacttaggttttatcatattacttgtaggcatttt 37837375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 45349770 - 45349716
Alignment:
Q  164 ggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||||||| ||||| |||||||| |||||||||||||||||||||||    
T  45349770 ggaagcatgtgaatttcggtgatttaggttttatcatattatttgtaggcatttt 45349716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 39171564 - 39171507
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| |||||||||||||| |||||||||||||||||||||||    
T  39171564 tccggaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcatttt 39171507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 9450111 - 9450054
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | ||||| |||| |||||||| |||||||||||||||||||||||    
T  9450111 tccggaagcatgggtattttagtgatttaggttttatcatattatttgtaggcatttt 9450054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 13796903 - 13796846
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| ||||||||| |||| |||||||||||||||||||||||    
T  13796903 tccggaagcatgagtatttaggtgacttaagttttatcatattatttgtaggcatttt 13796846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 47590428 - 47590485
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| || ||||||||||| |||||||||||||||||||||||    
T  47590428 tccggaagcatgagtatttcggcgacttaggttttatcatattatttgtaggcatttt 47590485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 24770356 - 24770420
Alignment:
Q  154 ttgaaggtccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||| ||| ||||||||||||||| || ||||||||||| ||||||||||| |||| ||||||    
T  24770356 ttgaagatccagaagcatgtgaatttcggagacttaggttttatcatattattggtagacatttt 24770420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 12141282 - 12141225
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| |||||||||| ||| ||||||||||||||| |||||||    
T  12141282 tccggaagcatgggtatttcggtgacttagattttatcatattatttgtatgcatttt 12141225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 19296987 - 19297044
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| ||| ||||| |||| |||||||||||||||||||||||    
T  19296987 tccggaagcatgggtatttcggtaacttaagttttatcatattatttgtaggcatttt 19297044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 30756793 - 30756736
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| ||||||||| |||| |||||||||||| ||||||||||    
T  30756793 tccggaagcatgagtatttcggtgacttaagttttatcatattatttataggcatttt 30756736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 40993278 - 40993331
Alignment:
Q  165 gaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||| | |||| ||||||||| |||| |||||||||||||||||||||||    
T  40993278 gaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcatttt 40993331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 42978727 - 42978784
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||| ||| | |||| |||||||||||||| |||||||||| ||||||||||||    
T  42978727 tccggaaggatgggtatttcggtgacttaggttttatcatattatatgtaggcatttt 42978784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 48316786 - 48316729
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| || || |||||||| |||||||||||||||||||||||    
T  48316786 tccggaagcatgggtatttcggcgatttaggttttatcatattatttgtaggcatttt 48316729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 24069367 - 24069311
Alignment:
Q  162 ccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||||||| | ||| |||||| |||| ||| |||||||||||||||||||||||    
T  24069367 ccggaagcatgaggattctggtgatttagattttatcatattatttgtaggcatttt 24069311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 48061544 - 48061596
Alignment:
Q  166 aagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||| | |||| ||||| |||||||| |||||||||||||||||||||||    
T  48061544 aagcatgagtatttcggtgatttaggttttatcatattatttgtaggcatttt 48061596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 8001518 - 8001463
Alignment:
Q  163 cggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||| |||| | |||| |||||||||||||| |||||||||||| ||||||||||    
T  8001518 cggaatcatgagtatttcggtgacttaggttttatcatattatttataggcatttt 8001463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 34899579 - 34899524
Alignment:
Q  163 cggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||| | |||| ||||||||| |||| ||||||||||||||| |||||||    
T  34899579 cggaagcatgggtatttcggtgacttaagttttatcatattatttgtatgcatttt 34899524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 39328771 - 39328710
Alignment:
Q  154 ttgaaggtccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||| |||| |||||||||||| | |||||||||||||| ||||   ||||||||||||||||    
T  39328771 ttgaagatccgaaagcatgtgaatctcggtgacttaggttttatca---tatttgtaggcatttt 39328710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 19404731 - 19404674
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | ||||  ||||||||| ||| |||||||||||||||||| ||||    
T  19404731 tccggaagcatgagtatttcagtgacttagattttatcatattatttgtaggcttttt 19404674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 46700152 - 46700209
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||||||||   |||| |||||||||| ||| |||||||||||| ||||||||||    
T  46700152 tccggaagcatggatatttcggtgacttagattttatcatattatttataggcatttt 46700209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 53444246 - 53444303
Alignment:
Q  154 ttgaaggtccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtag 211  Q
    |||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  53444246 ttgaagatccggaagcatgtgaatttcggtgacttaggttttatcatattatttgtag 53444303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 21686216 - 21686159
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||||||||| |||||||| |||||||||||||||||||||||    
T  21686216 tccggaagcatgagtattttggtgatttaggttttatcatattatttgtaggcatttt 21686159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 35348442 - 35348499
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||||||||||   |||||||||||| |||||||||||||||||||||||    
T  35348442 tccggaagcatgtgaatttcaatgacttaggttttatcatattatttgtaggcatttt 35348499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 8670613 - 8670677
Alignment:
Q  154 ttgaaggtccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||| |||| |||||||||||||| ||||||||||| || ||||||||||||| |||||||||    
T  8670613 ttgaagatccgaaagcatgtgaatttcggtgacttaggatttatcatattatttgaaggcatttt 8670677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 22611318 - 22611375
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| ||||||||| |||| |||||||||||||||||||||||    
T  22611318 tccggaagcatgagtatttcggtgacttaagttttatcatattatttgtaggcatttt 22611375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 53811163 - 53811220
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| ||||||||| |||| |||||||||||||||||||||||    
T  53811163 tccggaagcatgagtatttcggtgacttaagttttatcatattatttgtaggcatttt 53811220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 56040616 - 56040563
Alignment:
Q  165 gaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||| | |||| |||||||||||||| |||||||||||||||||||||||    
T  56040616 gaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcatttt 56040563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 21662572 - 21662622
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtag 211  Q
    |||||||||||| | |||| |||||||||||||| ||||||||||||||||    
T  21662572 tccggaagcatgggtatttcggtgacttaggttttatcatattatttgtag 21662622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 21671336 - 21671386
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtag 211  Q
    |||||||||||| | |||| |||||||||||||| ||||||||||||||||    
T  21671336 tccggaagcatgggtatttcggtgacttaggttttatcatattatttgtag 21671386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 56156613 - 56156559
Alignment:
Q  164 ggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||||||| ||||||||| |||| ||||  |||||||||||||||||    
T  56156613 ggaagcatgtgaatttcggtgacttatgttttatcaatttatttgtaggcatttt 56156559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 10496470 - 10496527
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||| ||||||| | |||| ||||| |||||||| |||||||||||||||||||||||    
T  10496470 tccgtaagcatgggtatttcggtgagttaggttttatcatattatttgtaggcatttt 10496527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 24099041 - 24098984
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||| |||| | ||||  ||||||||||||| |||||||||||||||||||||||    
T  24099041 tccggaaacatgggtatttcagtgacttaggttttatcatattatttgtaggcatttt 24098984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 43510335 - 43510388
Alignment:
Q  165 gaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||| | |||| ||||||||| |||| |||||||||||||||||||||||    
T  43510335 gaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcatttt 43510388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 10258869 - 10258813
Alignment:
Q  162 ccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||   ||||||||||||||| ||| |||||||||||||||| ||||||    
T  10258869 ccggaagcatgaatattttggtgacttagattttatcatattatttgtagacatttt 10258813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 218
Target Start/End: Complemental strand, 11299975 - 11299927
Alignment:
Q  170 atgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||| ||||||||| |||| ||||||||||| |||||||||||    
T  11299975 atgtgaatttcggtgacttatgttttatcatattattcgtaggcatttt 11299927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 12199665 - 12199610
Alignment:
Q  163 cggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||| ||||||||| |||||||  || ||||||||||||||||| |||||    
T  12199665 cggaagcatgagaattttggcgacttagaatttatcatattatttgtaggtatttt 12199610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 32766649 - 32766704
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatt 216  Q
    ||||||| |||| | |||| ||||||||| |||| |||||||||||||||||||||    
T  32766649 tccggaaacatgggtatttcggtgacttaagttttatcatattatttgtaggcatt 32766704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 33921189 - 33921244
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatt 216  Q
    |||||||||||| | ||||  ||||||||| ||| |||||||||||||||||||||    
T  33921189 tccggaagcatgggtatttcagtgacttagattttatcatattatttgtaggcatt 33921244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 29120350 - 29120296
Alignment:
Q  164 ggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||||| | |||| ||| |||||| ||| |||||||||||||||||||||||    
T  29120350 ggaagcatgagtatttcggtaacttagattttatcatattatttgtaggcatttt 29120296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 45418662 - 45418704
Alignment:
Q  176 attttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||| |||||||||| ||| |||||||||||||||||||||||    
T  45418662 atttcggtgacttagattttatcatattatttgtaggcatttt 45418704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 2520914 - 2520971
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| ||||| |||| ||| ||| |||||||||||||||||||    
T  2520914 tccggaagcatgggtatttcggtgatttagattttatcgtattatttgtaggcatttt 2520971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 17949298 - 17949241
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||| ||| | |||||| |||||||||||| |||||||||| |||| |||||||    
T  17949298 tccggaagaatgggtattttgatgacttaggttttatcatattatatgtatgcatttt 17949241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 17953150 - 17953093
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||| ||| | |||||| |||||||||||| |||||||||| |||| |||||||    
T  17953150 tccggaagaatgggtattttgatgacttaggttttatcatattatatgtatgcatttt 17953093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 19853486 - 19853429
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||||||||   |||| ||||||||| |||| |||||||||||| ||||||||||    
T  19853486 tccggaagcatggatatttcggtgacttaagttttatcatattatttctaggcatttt 19853429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 52944446 - 52944503
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | ||| |||||| |||| ||| |||||||| ||||||||||||||    
T  52944446 tccggaagcatgggtattctggtgatttagatttcatcatattttttgtaggcatttt 52944503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 14872757 - 14872814
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||    
T  14872757 tccggaagcatgggtattttggtgacttaggttttatcatattatttgtaggcatttt 14872814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 16989482 - 16989546
Alignment:
Q  154 ttgaaggtccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||| ||||||| |||||||||||  ||||||||||||| |||||||||||||||||||||||    
T  16989482 ttgaagatccggaatcatgtgaatttcagtgacttaggttttatcatattatttgtaggcatttt 16989546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 23291623 - 23291559
Alignment:
Q  154 ttgaaggtccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||| ||||||||||||||||||| |||||||||||||| ||||||||||||| ||| |||||    
T  23291623 ttgaagatccggaagcatgtgaatttcggtgacttaggttttatcatattatttggaggtatttt 23291559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 7836763 - 7836713
Alignment:
Q  168 gcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  7836763 gcatgtgaatttcggtgacttaggttttatcatattatttgtaggcatttt 7836713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 34878259 - 34878195
Alignment:
Q  154 ttgaaggtccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||| |||||||||||||||  ||  ||||||||||||| |||||||||||||||||||||||    
T  34878259 ttgaagatccggaagcatgtgatattcagtgacttaggttttatcatattatttgtaggcatttt 34878195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 1742392 - 1742454
Alignment:
Q  154 ttgaaggtccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||| |||| |||||||||||||| ||||||  |||||| |||||||||||||||||||||||    
T  1742392 ttgaagatccgaaagcatgtgaatttcggtgac--aggttttatcatattatttgtaggcatttt 1742454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 4413232 - 4413289
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||||||||   |||| |||||||||||||| |||||||||||||||||||||||    
T  4413232 tccggaagcatgaatatttcggtgacttaggttttatcatattatttgtaggcatttt 4413289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 5983954 - 5984011
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| ||||||||| |||| |||||||||||||||||||||||    
T  5983954 tccggaagcatgggtatttcggtgacttatgttttatcatattatttgtaggcatttt 5984011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 45415676 - 45415733
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||  | |||| |||||||||||||| |||||||||||||||||||||||    
T  45415676 tccggaagcataggtatttcggtgacttaggttttatcatattatttgtaggcatttt 45415733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 7337637 - 7337580
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| ||||| || ||||| |||||||||||||||||||||||    
T  7337637 tccggaagcatgggtatttcggtgattttggttttatcatattatttgtaggcatttt 7337580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 10776431 - 10776378
Alignment:
Q  165 gaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||| | |||| |||||||||||||| ||||| |||||||||||||||||    
T  10776431 gaagcatgagtatttcggtgacttaggttttatcattttatttgtaggcatttt 10776378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 21947592 - 21947535
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||||||||   |||| ||||||||| |||| |||||||||||||||||||||||    
T  21947592 tccggaagcatgaatatttcggtgacttaagttttatcatattatttgtaggcatttt 21947535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 31984279 - 31984336
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| |||||||||||||| |||||||||||| || |||||||    
T  31984279 tccggaagcatgggtatttcggtgacttaggttttatcatattatttttaagcatttt 31984336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 18939440 - 18939494
Alignment:
Q  164 ggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||||||| |||||||||||||||  || |||| |||||||| |||||||||    
T  18939440 ggaagcatgtgtattttggtgacttagaatttatcaaattatttgcaggcatttt 18939494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 8211885 - 8211828
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | ||||   |||||||||||| ||||||||||||||||| |||||    
T  8211885 tccggaagcatgggtatttcaatgacttaggttttatcatattatttgtaggtatttt 8211828  T

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Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 11462456 - 11462399
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||| |||| | |||| ||||||||| |||| ||||||||||||||||| |||||    
T  11462456 tccggaaacatgggtatttcggtgacttaagttttatcatattatttgtaggaatttt 11462399  T

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Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 32679115 - 32679058
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | ||| |||||| |||| ||| |||||||| ||||||||||||||    
T  32679115 tccggaagcatgagtattatggtgatttagatttcatcatattttttgtaggcatttt 32679058  T

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Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 34413062 - 34413009
Alignment:
Q  165 gaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||| | ||| |||||| |||| ||| |||||||||||||||||||||||    
T  34413062 gaagcatgggtattctggtgatttagatttcatcatattatttgtaggcatttt 34413009  T

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Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 35462023 - 35461978
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatt 206  Q
    |||||||||||||| |||| ||||||||| |||| |||||||||||    
T  35462023 tccggaagcatgtgtatttcggtgacttaagttttatcatattatt 35461978  T

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Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 44915757 - 44915814
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| |||  ||||| ||| |||||||||||||||||||||||    
T  44915757 tccggaagcatgagtatttcggtttcttagattttatcatattatttgtaggcatttt 44915814  T

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Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 47133021 - 47133078
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | ||| |||||| |||| ||| |||||||| ||||||||||||||    
T  47133021 tccggaagcatgagtattctggtgatttagatttcatcatattttttgtaggcatttt 47133078  T

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Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 218
Target Start/End: Original strand, 21687521 - 21687553
Alignment:
Q  186 cttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||||| |||||||||||||||||||||||    
T  21687521 cttaggttttatcatattatttgtaggcatttt 21687553  T

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Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 29738638 - 29738582
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcattt 217  Q
    |||||||||||||| ||||  ||||||||||| | |||||||||||| | |||||||    
T  29738638 tccggaagcatgtgtatttcagtgacttaggtgttatcatattatttattggcattt 29738582  T

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Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 32395121 - 32395173
Alignment:
Q  166 aagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||| | |||| ||||||||| |||| |||||||||||| ||||||||||    
T  32395121 aagcatgggtatttcggtgacttaagttttatcatattatttataggcatttt 32395173  T

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Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 48750308 - 48750360
Alignment:
Q  166 aagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||| | ||| |||||| |||| ||| |||||||||||||||||||||||    
T  48750308 aagcatgggtattctggtgatttagatttcatcatattatttgtaggcatttt 48750360  T

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Target: scaffold0445 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 1463 - 1516
Alignment:
Q  165 gaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||||||||||    
T  1463 gaagcatgtgaatttcggtgatttaggttttatcatattatttgtaggcatttt 1516  T

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Target: scaffold0127 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 15607 - 15664
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||||||||   |||| |||||||||||||| |||||||||||||||||||||||    
T  15607 tccggaagcatggatatttcggtgacttaggttttatcatattatttgtaggcatttt 15664  T

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Target: scaffold0050 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 66016 - 65959
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| ||||||||| |||| |||||||||||||||||||||||    
T  66016 tccggaagcatgggtatttcggtgacttatgttttatcatattatttgtaggcatttt 65959  T

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Target: scaffold0017 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 32718 - 32664
Alignment:
Q  164 ggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||||| | |||| |||||||||| ||| |||||||||||||||||||||||    
T  32718 ggaagcatgagtatttcggtgacttagattttatcatattatttgtaggcatttt 32664  T

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Target: scaffold0347 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 6145 - 6202
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||||| ||| |||||| |||| ||| |||||||||||||||| ||||||    
T  6145 tccggaagcatgtgtattctggtgatttagattttatcatattatttgtagacatttt 6202  T

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Target: scaffold0121 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 31248 - 31191
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| |||||||||| ||| |||||||||||| ||||||||||    
T  31248 tccggaagcatgggtatttcggtgacttagattttatcatattatttataggcatttt 31191  T

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Target: scaffold0088 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 50891 - 50948
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    ||||||||||||   |||| ||||||||| |||| |||||||||||||||||||||||    
T  50891 tccggaagcatggatatttcggtgacttaagttttatcatattatttgtaggcatttt 50948  T

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Target: scaffold0049 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 71274 - 71217
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||||| |||||||| ||| || ||||||||||||||||||||    
T  71274 tccggaagcatgggtattttgatgacttagattttattatattatttgtaggcatttt 71217  T

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Target: scaffold0884 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 1932 - 1890
Alignment:
Q  176 attttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||| ||||| |||||||| |||||||||||||||||||||||    
T  1932 atttcggtgatttaggttttatcatattatttgtaggcatttt 1890  T

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Target: scaffold0262 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 1793 - 1736
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | |||| | |||||||  ||| |||||||||||||||||||||||    
T  1793 tccggaagcatgggtatttcgatgacttatattttatcatattatttgtaggcatttt 1736  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 58062 - 58005
Alignment:
Q  161 tccggaagcatgtgaattttggtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||||||| | ||| |||||| |||| ||| |||||||| ||||||||||||||    
T  58062 tccggaagcatgagtattctggtgatttagatttcatcatattttttgtaggcatttt 58005  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 71823 - 71787
Alignment:
Q  182 gtgacttaggtttgatcatattatttgtaggcatttt 218  Q
    |||||||| |||| |||||||||||||||||||||||    
T  71823 gtgacttaagttttatcatattatttgtaggcatttt 71787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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