View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7191_high_14 (Length: 307)
Name: NF7191_high_14
Description: NF7191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7191_high_14 |
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Alignment Details
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 52 - 290
Target Start/End: Original strand, 15489207 - 15489445
Alignment:
| Q |
52 |
aagccgtgctgtttcagcagatgaaggggaaggaaaaataaatgtggaaacaattaagactccatctatgatctttttcttgcagacaattattacttta |
151 |
Q |
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| T |
15489207 |
aagccgtgctgtttcagtagatgaaggggaaggaaaaataaatgtggaagcaattaagcctccatctatgatctttttcttgcagacaaatattacttta |
15489306 |
T |
|
| Q |
152 |
tatagtttttagttcccttgcaactgcaatgttattcaacaaaaacaatagattggtacaacagtgtaattacttgagtaatacannnnnnnnggatgaa |
251 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
15489307 |
tatagtttttagttcccttgcaactgcaatgttattcaacagaaacaatagattggtacaacagtgtaattacttgagtaatacattttttttggatgaa |
15489406 |
T |
|
| Q |
252 |
gttgaacatgtcttgtttagatttttgctactacatgat |
290 |
Q |
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| T |
15489407 |
gttgaacatgtcttgtttagatttttgctactacatgat |
15489445 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 52 - 290
Target Start/End: Original strand, 15430812 - 15431050
Alignment:
| Q |
52 |
aagccgtgctgtttcagcagatgaaggggaaggaaaaataaatgtggaaacaattaagactccatctatgatctttttcttgcagacaattattacttta |
151 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||| |
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| T |
15430812 |
aagccgtgctgtttcagtagatgaaggggaaggaaaaataaatgtggaagcaattaagcctccatctatgatctttttcttgcagacaaatattacttta |
15430911 |
T |
|
| Q |
152 |
tatagtttttagttcccttgcaactgcaatgttattcaacaaaaacaatagattggtacaacagtgtaattacttgagtaatacannnnnnnnggatgaa |
251 |
Q |
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| T |
15430912 |
tatagtttttagttcccttgcaactgcaatgttattcaacagaaacaatagattggtacaacagtgtaattacttgagtaatacattatttttggatgaa |
15431011 |
T |
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| Q |
252 |
gttgaacatgtcttgtttagatttttgctactacatgat |
290 |
Q |
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| T |
15431012 |
gttgaacatgtcttgtttagatttttgctacaacatgat |
15431050 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 64 - 290
Target Start/End: Original strand, 15557260 - 15557486
Alignment:
| Q |
64 |
ttcagcagatgaaggggaaggaaaaataaatgtggaaacaattaagactccatctatgatctttttcttgcagacaattattactttatatagtttttag |
163 |
Q |
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||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
15557260 |
ttcagtagatgaaggggaaggaaaaataaatgtggaagcaattaagcctccatctatgatctttttcttgcagacaaatattactttatatagtttttag |
15557359 |
T |
|
| Q |
164 |
ttcccttgcaactgcaatgttattcaacaaaaacaatagattggtacaacagtgtaattacttgagtaatacannnnnnnnggatgaagttgaacatgtc |
263 |
Q |
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| T |
15557360 |
ttcccttgcgactgcaatgttattcaacagaaacaatagattggtacaacagtgtaattacttgagtaatacattttttttggatgaagttgaacatgtc |
15557459 |
T |
|
| Q |
264 |
ttgtttagatttttgctactacatgat |
290 |
Q |
| |
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| T |
15557460 |
ttgtttagatttttgctactacatgat |
15557486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 52 - 290
Target Start/End: Original strand, 15450272 - 15450510
Alignment:
| Q |
52 |
aagccgtgctgtttcagcagatgaaggggaaggaaaaataaatgtggaaacaattaagactccatctatgatctttttcttgcagacaattattacttta |
151 |
Q |
| |
|
||||||||||||||||| || |||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||| |||||||||| |
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| T |
15450272 |
aagccgtgctgtttcagtaggtgaaggggaaggaaaaataaatttggaagcaattaagcctccatctatgatctttttcttgcagacaaatattacttta |
15450371 |
T |
|
| Q |
152 |
tatagtttttagttcccttgcaactgcaatgttattcaacaaaaacaatagattggtacaacagtgtaattacttgagtaatacannnnnnnnggatgaa |
251 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||| |
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| T |
15450372 |
tatagtttttagttcccttgcgactgcaatgttattcaacagaaacaatagattggtacaacagtataattacttgagtaatacattctttttggatgaa |
15450471 |
T |
|
| Q |
252 |
gttgaacatgtcttgtttagatttttgctactacatgat |
290 |
Q |
| |
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||||||||||||||||||||||||||||||| ||||||| |
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| T |
15450472 |
gttgaacatgtcttgtttagatttttgctacaacatgat |
15450510 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 290
Target Start/End: Original strand, 16943770 - 16944074
Alignment:
| Q |
1 |
ttgctcataaattcgttttcttctgtcttgctcatattttttaaattataa------------------aagccgtgctgtttcagcagatgaaggggaa |
82 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||| |
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| T |
16943770 |
ttgctcataaattcgttttcttctgtcttgctcatattttttgaattataactctaataggtgatattcaagccgtgctgtttcagtagatgaaggggaa |
16943869 |
T |
|
| Q |
83 |
ggaaaaataaatgtggaaacaattaagactccatctatgatctttttcttgcagacaattattactttatatagtttttagttcccttgcaactgcaatg |
182 |
Q |
| |
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|||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |
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| T |
16943870 |
ggaaaaataaatgtagaagcaattaagcctccatctatgatctttttcttgcagacaaatattactttatatagtttttagttcccttgcgactgcaatg |
16943969 |
T |
|
| Q |
183 |
ttattcaacaaaaacaatagattggtacaacagtgtaattacttgagtaatacannnnnnnnggatgaagttgaacatgtcttgtttagatttttgctac |
282 |
Q |
| |
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|||||||||| ||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
16943970 |
ttattcaacagaaacaatagattggt---acagagtaattacttgagtaatacattttttttggatgaagttgaacatgtcttgtttagatttttgctac |
16944066 |
T |
|
| Q |
283 |
tacatgat |
290 |
Q |
| |
|
|||||||| |
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| T |
16944067 |
tacatgat |
16944074 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 15450201 - 15450253
Alignment:
| Q |
1 |
ttgctcataaattcgttttcttct--gtcttgctcatattttttaaattataa |
51 |
Q |
| |
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||||| |||||||||||||||||| |||||||||| ||||||| |||||||| |
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|
| T |
15450201 |
ttgcttataaattcgttttcttctctgtcttgctcaaattttttgaattataa |
15450253 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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