View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7191_low_13 (Length: 311)
Name: NF7191_low_13
Description: NF7191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7191_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 19 - 303
Target Start/End: Original strand, 15488818 - 15489100
Alignment:
| Q |
19 |
agttgttctcccaatttgtttgctcgaaatgttctttacggtgatgatgttccaaggattccacacatcatgctatatgcagctgagaacattccgagca |
118 |
Q |
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|||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15488818 |
agttgttctcccaatttgtttgttcgaaatgttctttacgatgatgatgttccaaggattccacacatcatgctatatgcagctgagaacattccgagca |
15488917 |
T |
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| Q |
119 |
tgaaagagctgactttagattacaattacaaaatcgatcaagtgattgattcaaatggaaatttaaagacgaaagcatgctatattgtggagcttctgaa |
218 |
Q |
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||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
15488918 |
tgaaagagctgactttagattacaattacaagatcgatcaagcgattgattcaaatggaaatttaaagacgaaagcatg--ttattgtggagcttctgaa |
15489015 |
T |
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| Q |
219 |
tgcatccgtcgactgtattgatgaggtaattcttttttacttagtccctctcattctgtcttgctcataaattcgttttcttctc |
303 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||| |
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| T |
15489016 |
tgcatccgtcgactttattgatgaggtaattcttttttactttggccctctcattctgtcttgctcataaatttattttcttctc |
15489100 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 19 - 303
Target Start/End: Original strand, 15430423 - 15430705
Alignment:
| Q |
19 |
agttgttctcccaatttgtttgctcgaaatgttctttacggtgatgatgttccaaggattccacacatcatgctatatgcagctgagaacattccgagca |
118 |
Q |
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|||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15430423 |
agttgttctcccaatttgtttgttcgaaatgttctttacgatgatgatgttccaaggattccacacatcatgctatatgcagctgagaacattccgagca |
15430522 |
T |
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| Q |
119 |
tgaaagagctgactttagattacaattacaaaatcgatcaagtgattgattcaaatggaaatttaaagacgaaagcatgctatattgtggagcttctgaa |
218 |
Q |
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| T |
15430523 |
tgaaagagctgactttagattacaattaaaagatcgatcaagagattgattcaaatggaaatttaaagacgaaagcatg--ttattgtggagcttctgaa |
15430620 |
T |
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| Q |
219 |
tgcatccgtcgactgtattgatgaggtaattcttttttacttagtccctctcattctgtcttgctcataaattcgttttcttctc |
303 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||| |
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| T |
15430621 |
tgcatccgtcgactatattgatgaggtaattcttttttactttggccctctcattctgtcttgctcataaatttattttcttctc |
15430705 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 19 - 303
Target Start/End: Original strand, 15449941 - 15450225
Alignment:
| Q |
19 |
agttgttctcccaatttgtttgctcgaaatgttctttacggtgatgatgttccaaggattccacacatcatgctatatgcagctgagaacattccgagca |
118 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15449941 |
agttgttctcccaatttgtttgctcgaaatgttctttacgatgatgatgatctgaggattccacacatcatgctatatgcagctgagaacattccgagca |
15450040 |
T |
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| Q |
119 |
tgaaagagctgactttagattacaattacaaaatcgatcaagtgattgattcaaatggaaatttaaagacgaaagcatgctatattgtggagcttctgaa |
218 |
Q |
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|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
15450041 |
tgaaagagctgactttagattacaattaaaagatcgatcaagtgattgattcaaatggaaatttaaagacgaaagcatg--ttattgtggagcttctgaa |
15450138 |
T |
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| Q |
219 |
tgcatccgtcgactgtatt--gatgaggtaattcttttttacttagtccctctcattctgtcttgctcataaattcgttttcttctc |
303 |
Q |
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||||||||||||||||||| |||||||||||| |||||||||| | |||||| ||| ||||||||| ||||||||||||||||||| |
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| T |
15450139 |
tgcatccgtcgactgtattgagatgaggtaattgttttttactttggccctcttattttgtcttgcttataaattcgttttcttctc |
15450225 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 19 - 302
Target Start/End: Original strand, 16943512 - 16943793
Alignment:
| Q |
19 |
agttgttctcccaatttgtttgctcgaaatgttctttacggtgatgatgttccaaggattccacacatcatgctatatgcagctgagaacattccgagca |
118 |
Q |
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||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
16943512 |
agttgctctcccaatttgtttgctcgaaatgttctttacgatgatgatgttccaaggattccacaaatcatgctatatgcagctgagaacattccgagca |
16943611 |
T |
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| Q |
119 |
tgaaagagctgactttagattacaattacaaaatcgatcaagtgattgattcaaatggaaatttaaagacgaaagcatgctatattgtggagcttctgaa |
218 |
Q |
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||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||| ||| ||||||| |||||||| | |
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| T |
16943612 |
tgaaagagctgactttagattacaattacaagatcaatcaagtgactgattcaaatggaaatttaaagacgaaagtatg--ttattgtgaagcttctgca |
16943709 |
T |
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| Q |
219 |
tgcatccgtcgactgtattgatgaggtaattcttttttacttagtccctctcattctgtcttgctcataaattcgttttcttct |
302 |
Q |
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||||||| ||||||||||||||||| |||||||||||||||| | |||||||||| |||||||||||||||||||||||||||| |
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| T |
16943710 |
tgcatccatcgactgtattgatgagttaattcttttttactttggccctctcattatgtcttgctcataaattcgttttcttct |
16943793 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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