View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7191_low_9 (Length: 396)
Name: NF7191_low_9
Description: NF7191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7191_low_9 |
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Alignment Details
Target: chr3 (Bit Score: 358; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 358; E-Value: 0
Query Start/End: Original strand, 18 - 387
Target Start/End: Complemental strand, 52273157 - 52272788
Alignment:
| Q |
18 |
acatcaatattttgtttcagcatgcacttaattgggatatttttactttagataaacactaatggatacttgggttgggtttcagatctaatgtttcttt |
117 |
Q |
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| T |
52273157 |
acatcaatattttgtttcagcatgcacttaattgggatatttttactttagataaacactaatggatacttgggttgggtttcagatctaatgtttcttt |
52273058 |
T |
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| Q |
118 |
tcatgacaatgatggcttccatgtggatattgattctgagcctcgccccagtgaagagataactaataagattgaaaatgctgaatccgaagaaacacca |
217 |
Q |
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| T |
52273057 |
tcatgacaatgatggcttccatgtggatattgattctgatcctcgccctagtgaagagataactaataagattgaaaatgctgaatccgaagaaacacca |
52272958 |
T |
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| Q |
218 |
gctacacgccctgcagagaatgatttaagcacactgcatattgatggttccaccgatgctgcagatcattcgagccgtgaaagtattccttctcctatgg |
317 |
Q |
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| T |
52272957 |
gctacacgccctgcagagaatgatttaagcacactgcatattgatggttccaccgatgctgcagatcattcgagccgtgaaagtattccttctcctatgg |
52272858 |
T |
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| Q |
318 |
ttagtccatattccagctagttatacaatacaatttggtatttcttcgtctcaaagtagtagattatatt |
387 |
Q |
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| T |
52272857 |
ttagtcaatattccagctagttatacaatacaatttggtatttcttcgtctcaaagtagtagattatatt |
52272788 |
T |
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