View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7192_low_11 (Length: 371)
Name: NF7192_low_11
Description: NF7192
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7192_low_11 |
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Alignment Details
Target: chr6 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 10 - 355
Target Start/End: Complemental strand, 421412 - 421067
Alignment:
| Q |
10 |
ataattctataaggtggctctatcctctaggaacattggacaaaagagaattagcattattgaagaaaagaatgataaatgttttcaatgtgataaacag |
109 |
Q |
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| T |
421412 |
ataattctataaggtggctctatcctctaggaacattggacaaaagagaattagcattattgaagaaaagaatgataaatgttttcaatgtgataaacag |
421313 |
T |
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| Q |
110 |
cattgattgactactnnnnnnnctattattttcaagctcgtacactatcagctaacctaacattaaagcagaaaattgcggccaacaaaagctgatagtg |
209 |
Q |
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| T |
421312 |
cattgattgactactaaaaaaactattattttcaagctcgtacactatcagctaacctaacattaaagcagaaaattgcggccaacaaaagctgatagtg |
421213 |
T |
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| Q |
210 |
tttgcttctatataaagaaatttaaagattcattcttaggaatcaatattgttttgtgagaatatattnnnnnnntaccaaatcacacaccaaagaggta |
309 |
Q |
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| T |
421212 |
tttgcttctatataaagaaatttaaagattcattcttaggaatcaatattgttttgtgagaatatattaaaaaaataccaaatcacacaccaaagaggta |
421113 |
T |
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| Q |
310 |
ataaaggtgataaaaagaattgtatgttgcttctagttgaaacaat |
355 |
Q |
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| T |
421112 |
ataaaggtgataaaaagaattgtatgttgcttctagttgaaacaat |
421067 |
T |
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