View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7192_low_15 (Length: 282)
Name: NF7192_low_15
Description: NF7192
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7192_low_15 |
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Alignment Details
Target: chr4 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 40635203 - 40635468
Alignment:
| Q |
1 |
tgaattagcttttggaattgaatgttaccagaatccaaatttaaaggcggtatcaaattatgttgttattgagccactcagagataagtctaaacttcac |
100 |
Q |
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| T |
40635203 |
tgaattagcttttggaatcgaatgttaccagaatccaaatttaaaggcggtatcaaattatgttgttattgagccactcagagataagtctaaacttcac |
40635302 |
T |
|
| Q |
101 |
cctccaaatgtttcccgcgtaaagtgggggcaaccttcaccctacgatttagcaaattctaagatgcttttaactgtagaacaatttgcaagaaaagaga |
200 |
Q |
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||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
40635303 |
cctccaaatgtctcccgcgtaaagtgggggcaaccttcaccctacgatttagcaaattctaagatacttttaactgtagaacaatttgcaagaaaagaga |
40635402 |
T |
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| Q |
201 |
attcttctctaaagaaaacagataaataaacgcttataagaacacaaaacgattgatcacagaaat |
266 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40635403 |
attcttctctaaagaaaacagataaataaacgcttataagaacacaaaacgattgatcacagaaat |
40635468 |
T |
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