View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7194_low_18 (Length: 224)
Name: NF7194_low_18
Description: NF7194
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7194_low_18 |
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Alignment Details
Target: chr1 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 15 - 208
Target Start/End: Original strand, 42342439 - 42342632
Alignment:
| Q |
15 |
tgctctgattattgtctatgctttcaagatgacccaaaatgattgatagagcaactcttcttgaaaatttttatactaaggaaatttctacatgtaaaat |
114 |
Q |
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| T |
42342439 |
tgctctgattattgtctatgctttcaagatgacccaaaatgattgatagagcaactcttcttgaaaaattttatactaaggaaatttctacatgtaaaat |
42342538 |
T |
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| Q |
115 |
gttacaagtacagcatgaagtctactttataatagtattattgtttgcttatagtgaattacaaaatggatataggcagaagcttacaatgatt |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42342539 |
gttacaagtacagcatgaagtctactttataatagtattattgtttgcttatagtgaattacaaaatggatataggcagaagcttacaatgatt |
42342632 |
T |
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