View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7195_high_2 (Length: 374)
Name: NF7195_high_2
Description: NF7195
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7195_high_2 |
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Alignment Details
Target: chr2 (Bit Score: 336; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 19 - 362
Target Start/End: Original strand, 32942554 - 32942897
Alignment:
| Q |
19 |
aactactttttctgttttgacaaaatctaataatctattgcgccgcattctctcaaactacagtgtcattaacttaattatgcatgtatgaatcatatgc |
118 |
Q |
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| T |
32942554 |
aactactttttctgttttgacaaaatctaataatctattgcgccgcattctctcaaactacagtgtcattaacttaattatgcatgtatgaatcatatgc |
32942653 |
T |
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| Q |
119 |
acagtcttgtgaagaaattaattaaggcacatgcattatacaagttcaaaagagggatcaaaactttgaattcatgaattcataatgaatcaaatctctt |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
32942654 |
acagtcttgtgaagaaattaattaaggcacatgcattatacaagttcaaaagagggatcaaaactttgaattcatgaattcataatgaatcaactctctt |
32942753 |
T |
|
| Q |
219 |
tcttttcttccaaaagtcggatataattaattgaataatttcagtttttggtgatcatcaaatagtgattattgttgattatatgtcaacatagctacat |
318 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32942754 |
tcttttcttccaaaagtcagatataattaattgaataatttcagtttttggtgatcatcaaatagtgattattgttgattatatgtcaacatagctacat |
32942853 |
T |
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| Q |
319 |
ctagtaattacagtgcatataaacagttaaacagctagcacagg |
362 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32942854 |
ctagtaattacagtgcatataaacagttaaacagctagcacagg |
32942897 |
T |
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