View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7197_low_5 (Length: 374)

Name: NF7197_low_5
Description: NF7197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7197_low_5
NF7197_low_5
[»] chr8 (2 HSPs)
chr8 (17-358)||(29273858-29274199)
chr8 (136-290)||(31903728-31903882)
[»] chr1 (3 HSPs)
chr1 (17-358)||(268432-268775)
chr1 (93-358)||(28164437-28164702)
chr1 (120-358)||(28127754-28127993)
[»] chr4 (5 HSPs)
chr4 (93-358)||(18724160-18724425)
chr4 (95-358)||(18731579-18731842)
chr4 (93-358)||(18699475-18699740)
chr4 (95-358)||(18679642-18679905)
chr4 (95-358)||(18655552-18655815)
[»] chr6 (47 HSPs)
chr6 (17-354)||(26646227-26646574)
chr6 (17-354)||(26752195-26752542)
chr6 (17-358)||(26622739-26623075)
chr6 (17-358)||(26728717-26729053)
chr6 (97-358)||(26861454-26861715)
chr6 (91-353)||(31284120-31284382)
chr6 (93-358)||(27677702-27677967)
chr6 (93-356)||(27718469-27718732)
chr6 (95-356)||(27611092-27611353)
chr6 (95-353)||(26802278-26802536)
chr6 (95-356)||(27724935-27725196)
chr6 (91-358)||(27706490-27706757)
chr6 (95-353)||(28780975-28781233)
chr6 (93-358)||(27698582-27698847)
chr6 (93-356)||(27593110-27593373)
chr6 (91-358)||(27678778-27679045)
chr6 (97-344)||(28786116-28786363)
chr6 (97-344)||(28792237-28792484)
chr6 (119-358)||(26823700-26823939)
chr6 (93-358)||(27229066-27229331)
chr6 (93-356)||(27604795-27605064)
chr6 (93-358)||(27338153-27338418)
chr6 (93-358)||(27398893-27399158)
chr6 (119-358)||(26884023-26884262)
chr6 (93-358)||(26655823-26656088)
chr6 (93-358)||(26761794-26762059)
chr6 (141-358)||(27531285-27531502)
chr6 (95-356)||(28139377-28139638)
chr6 (203-358)||(25579663-25579818)
chr6 (224-358)||(28234529-28234663)
chr6 (203-358)||(26142809-26142964)
chr6 (115-358)||(28180970-28181213)
chr6 (166-358)||(28242711-28242903)
chr6 (203-358)||(25481686-25481841)
chr6 (203-358)||(26055870-26056025)
chr6 (203-358)||(26075840-26075995)
chr6 (115-358)||(28185222-28185465)
chr6 (178-353)||(25507002-25507171)
chr6 (177-358)||(28226868-28227049)
chr6 (203-358)||(25538484-25538639)
chr6 (91-356)||(26342024-26342292)
chr6 (233-358)||(28149912-28150036)
chr6 (203-358)||(26048789-26048944)
chr6 (203-358)||(26069958-26070113)
chr6 (136-354)||(26893563-26893781)
chr6 (205-251)||(27665312-27665358)
chr6 (298-356)||(28325520-28325578)
[»] scaffold1254 (1 HSPs)
scaffold1254 (93-353)||(10-270)
[»] scaffold0419 (1 HSPs)
scaffold0419 (93-353)||(7359-7619)
[»] scaffold0349 (3 HSPs)
scaffold0349 (95-358)||(3509-3773)
scaffold0349 (93-349)||(14452-14708)
scaffold0349 (93-185)||(8062-8154)
[»] scaffold0277 (2 HSPs)
scaffold0277 (95-353)||(13725-13983)
scaffold0277 (97-356)||(4761-5020)
[»] scaffold0038 (4 HSPs)
scaffold0038 (224-358)||(34690-34824)
scaffold0038 (166-358)||(42873-43065)
scaffold0038 (177-358)||(27366-27547)
scaffold0038 (298-356)||(116835-116893)
[»] scaffold0019 (1 HSPs)
scaffold0019 (121-358)||(58370-58607)
[»] chr2 (1 HSPs)
chr2 (237-354)||(3279666-3279783)


Alignment Details
Target: chr8 (Bit Score: 322; Significance: 0; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 17 - 358
Target Start/End: Complemental strand, 29274199 - 29273858
Alignment:
Q  17 caacaataacatacacctactcatccatattctatattctcaaacattcctctatcttccattaatttcttctcaatctcatggctatgcaatcaccttc 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29274199 caacaataacatacacctactcatccatattctatattctcaaacaatcctctatcttccattaatttcttctcaatctcatggctatgcaatcaccttc 29274100  T
Q  117 ctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttttattggccatctctacaaggct 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  29274099 ctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttttattggccatctctacaagact 29274000  T
Q  217 cttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctagga 316  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  29273999 cttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgtcattgaagagtctagaa 29273900  T
Q  317 tttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  29273899 tttttattcctgtgttttctatcaactatgcctcttcttcat 29273858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 290
Target Start/End: Original strand, 31903728 - 31903882
Alignment:
Q  136 tatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttttattggccatctctacaaggctcttactgacaagggaatcc 235  Q
    ||||||||||| ||| | || ||||||| ||||||||||   ||||||||  | ||||||| |||  |||||||||| ||||||  ||| ||||||||||    
T  31903728 tatggattcacctacgatgtgttcctcagctttagaggcttagacactcgctatggttttactggaaatctctacaaagctctttatgataagggaatcc 31903827  T
Q  236 acaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcact 290  Q
    ||||||| ||||| |||   ||||||| ||||||  ||||||||| | |||||||    
T  31903828 acacctttattgacgatgaagaacttcaaagaggacatgaaatcacaccatcact 31903882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 284; Significance: 1e-159; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 17 - 358
Target Start/End: Complemental strand, 268775 - 268432
Alignment:
Q  17 caacaataacatacacctactcatccatattctatattctcaaacattcctc-tatcttccattaatttcttctcaat-ctcatggctatgcaatcacct 114  Q
    ||||||||  |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| | |||||||||||||||||||||    
T  268775 caacaatagtatacacctactcatccatattctatattctcaaacaatcctcctatcttccattaatttcttctcagttctcatggctatgcaatcacct 268676  T
Q  115 tcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttttattggccatctctacaagg 214  Q
    |||||||||||||||||||||||||||||  | |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  268675 tcctcttcctcttcaatctcatatggatttgcctaccaggtcttcctcaacttcagaggcggtgacactcgtgagggttttattggccatctctacaagg 268576  T
Q  215 ctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctag 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  268575 ctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctag 268476  T
Q  315 gatttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  268475 gatttttattcctgtgttttctatcaactatgcctcttcttcat 268432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 93 - 358
Target Start/End: Complemental strand, 28164702 - 28164437
Alignment:
Q  93 tctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggt 192  Q
    |||||||||||| | ||| | |||||||||||||||||| || ||||||||||| ||||| || |||||||  ||||| ||| |||||||||||||||||    
T  28164702 tctcatggctatacgatcgcattcctcttcctcttcaatttcctatggattcacataccaagtgttcctcagttttaggggcagtgacactcgtgacggt 28164603  T
Q  193 tttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcg 292  Q
    || | |||||||||||| ||||| |||   ||||||||||| ||||| |||||||||||| |||| |||   ||||| || ||||||| | | ||| ||     
T  28164602 ttcactggccatctctataaggcccttgacgacaagggaattcacacattcattgatgattgtgatcttgagagaggagaagaaatcacaccgtcattca 28164503  T
Q  293 acaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
     ||| ||||||||| | ||| | ||||||||||||||||| |||||||||||||||||||||||||    
T  28164502 tcaaggccattgaaaaatcttgaatttttattcctgtgttatctatcaactatgcctcttcttcat 28164437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 120 - 358
Target Start/End: Complemental strand, 28127993 - 28127754
Alignment:
Q  120 ttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttttattggccatctctacaaggctctt 219  Q
    |||||||||||| || ||||||||||| ||||| || ||||||| ||| || ||| ||||||||||||||||||| | |||||||||||||||||| |||    
T  28127993 ttcctcttcaatttcctatggattcacataccaagtgttcctcagcttcaggggcagtgacactcgtgacggtttcactggccatctctacaaggccctt 28127894  T
Q  220 actgacaagggaatccacaccttcattgatgatcgtgaacttcgaagagg-ggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatt 318  Q
      |||||||||||||||||| |||||||||||| || | |||   ||||| | |  |||||| | | |||||    || ||||||||||| ||||| |||    
T  28127893 tatgacaagggaatccacacattcattgatgattgtaatcttgagagaggagaaaaaaatcacaccgtcacttttaaaggccattgaagaatctagaatt 28127794  T
Q  319 tttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
    ||||||||||| ||||||| ||||||||||||||||||||    
T  28127793 tttattcctgtattttctaccaactatgcctcttcttcat 28127754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 182; Significance: 3e-98; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 93 - 358
Target Start/End: Complemental strand, 18724425 - 18724160
Alignment:
Q  93 tctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggt 192  Q
    ||||||||||||||||||||||||||| ||||||||| | || ||| ||||||||||||| || ||||||| ||| || ||| ||||||||||| |||||    
T  18724425 tctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggt 18724326  T
Q  193 tttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcg 292  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || | ||||||||||||||||||| |||||||||    
T  18724325 tttactggtcatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcg 18724226  T
Q  293 acaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  18724225 acaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcat 18724160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 95 - 358
Target Start/End: Complemental strand, 18731842 - 18731579
Alignment:
Q  95 tcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttt 194  Q
    ||||||||||||||||||||||||| ||||||||| | || ||| ||||||||||||| || ||||||| ||| || ||| |||||||||||||||||||    
T  18731842 tcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtgacggttt 18731743  T
Q  195 tattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgac 294  Q
    || ||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||| || | ||||||||||||||||||| |||||||||||    
T  18731742 tactggccatctctacagagctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgac 18731643  T
Q  295 aatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  18731642 aatgccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcat 18731579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 93 - 358
Target Start/End: Complemental strand, 18699740 - 18699475
Alignment:
Q  93 tctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggt 192  Q
    ||||||||||||||||||||||||||| ||||||||| | || ||| ||||||||||||| || ||||||| ||| || |||  ||||||||||||||||    
T  18699740 tctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcactgacactcgtgacggt 18699641  T
Q  193 tttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcg 292  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| || | ||| ||||||||||||||| |||||||||    
T  18699640 tttactggccatctctacaaagctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagtggggatgaaatcaaaccatcactcg 18699541  T
Q  293 acaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  18699540 acaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcat 18699475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 95 - 358
Target Start/End: Complemental strand, 18679905 - 18679642
Alignment:
Q  95 tcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttt 194  Q
    ||||||||||||||||||||||||| | ||||||| | || ||| ||||||||||||| || ||||||| ||| || ||| ||||||||||| |||||||    
T  18679905 tcatggctatgcaatcaccttcctcattctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttt 18679806  T
Q  195 tattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgac 294  Q
    || ||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| || | ||||||||||||||||||| |||||||||||    
T  18679805 tactggtcatctctacaaggctcttactgacaaaggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgac 18679706  T
Q  295 aatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  18679705 aatgccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcat 18679642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 95 - 358
Target Start/End: Complemental strand, 18655815 - 18655552
Alignment:
Q  95 tcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttt 194  Q
    ||||||||| ||||||||||||||| ||||||||| | || ||| ||||||||||||| || ||||||| ||| || ||| ||||||||||| |||||||    
T  18655815 tcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttt 18655716  T
Q  195 tattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgac 294  Q
    || ||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| || | ||| ||||||||||||||| |||||||||||    
T  18655715 tactgggcatctctacaaagctcttactgacaagggaatccacaccttcattgatgaccgtgagctgcaaagtggggatgaaatcaaaccatcactcgac 18655616  T
Q  295 aatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18655615 aatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttcat 18655552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 178; Significance: 6e-96; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 17 - 354
Target Start/End: Original strand, 26646227 - 26646574
Alignment:
Q  17 caacaataacatacacctactcatccatattctatattctcaaacatt--cctc-tatcttccattaatttcttctcaat-ctcatggctatgcaatcac 112  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||||| |  |||| ||||||||||||||||| | ||||| ||||||||||||||||| |    
T  26646227 caacaataacatacaccaactcatccatattctgtattcttaaacaatatcctcctatcttccattaatttcctttcaattctcatggctatgcaatctc 26646326  T
Q  113 cttcc------tcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttttattggccatct 206  Q
    |||||      |||||||||| ||| || || |||||||| |||||||||||||||||||| || ||| ||||||||||||||||||||| ||| |||||    
T  26646327 cttcctattcctcttcctctttaatttcctacggattcacctaccaggtcttcctcaacttcaggggcagtgacactcgtgacggttttactggacatct 26646426  T
Q  207 ctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaa 306  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||| |||   ||||| |||||||||| | ||||||||  ||| |||||||||    
T  26646427 ctacaaggctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaatcacaccatcactcatcaaggccattgaa 26646526  T
Q  307 gagtctaggatttttattcctgtgttttctatcaactatgcctcttct 354  Q
    || |||||||||||||||||||||||||||||||||||||||||||||    
T  26646527 gaatctaggatttttattcctgtgttttctatcaactatgcctcttct 26646574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 17 - 354
Target Start/End: Original strand, 26752195 - 26752542
Alignment:
Q  17 caacaataacatacacctactcatccatattctatattctcaaacatt--cctc-tatcttccattaatttcttctcaat-ctcatggctatgcaatcac 112  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||||| |  |||| ||||||||||||||||| | ||||| ||||||||||||||||| |    
T  26752195 caacaataacatacaccaactcatccatattctgtattcttaaacaatatcctcctatcttccattaatttcctttcaattctcatggctatgcaatctc 26752294  T
Q  113 cttcc------tcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttttattggccatct 206  Q
    |||||      |||||||||| ||| || || |||||||| |||||||||||||||||||| || ||| ||||||||||||||||||||| ||| |||||    
T  26752295 cttcctattcctcttcctctttaatttcctacggattcacctaccaggtcttcctcaacttcaggggcagtgacactcgtgacggttttactggacatct 26752394  T
Q  207 ctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaa 306  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||| |||   ||||| |||||||||| | ||||||||  ||| |||||||||    
T  26752395 ctacaaggctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaatcacaccatcactcatcaaggccattgaa 26752494  T
Q  307 gagtctaggatttttattcctgtgttttctatcaactatgcctcttct 354  Q
    || |||||||||||||||||||||||||||||||||||||||||||||    
T  26752495 gaatctaggatttttattcctgtgttttctatcaactatgcctcttct 26752542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 17 - 358
Target Start/End: Original strand, 26622739 - 26623075
Alignment:
Q  17 caacaataacatacacctactcatccatattctatattctcaaacattcctctatcttccattaatttcttctcaatc-tcatggctatgcaatcacctt 115  Q
    |||||||||||||| |  |||||||| ||||||||| ||||||| | |    ||||||| | |||||| || |||||  ||||||||||||||||||| |    
T  26622739 caacaataacatacgc--actcatccctattctatactctcaaatact----tatcttcaactaatttgttatcaattatcatggctatgcaatcaccat 26622832  T
Q  116 cctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttttattggccatctctacaaggc 215  Q
    |||||||||||||||| || |||  |||||  ||||| || ||||| |  || |||||| ||||||||||  ||||||| | |||  |||||||||||||    
T  26622833 cctcttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggtacggtttcactggaaatctctacaaggc 26622932  T
Q  216 tcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctagg 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||| |||||||| || ||||||||||||    
T  26622933 tcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatcacttgacaatgctatcgaagagtctagg 26623032  T
Q  316 atttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
    |||||||||||||||||||||  ||||||||| | ||||||||    
T  26623033 atttttattcctgtgttttctcccaactatgcatattcttcat 26623075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 17 - 358
Target Start/End: Original strand, 26728717 - 26729053
Alignment:
Q  17 caacaataacatacacctactcatccatattctatattctcaaacattcctctatcttccattaatttcttctcaatc-tcatggctatgcaatcacctt 115  Q
    |||||||||||||| |  |||||||| ||||||||| ||||||| | |    ||||||| | |||||| || |||||  ||||||||||||||||||| |    
T  26728717 caacaataacatacgc--actcatccctattctatactctcaaatact----tatcttcaactaatttgttatcaattatcatggctatgcaatcaccat 26728810  T
Q  116 cctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttttattggccatctctacaaggc 215  Q
    |||||||||||||||| || |||  |||||  ||||| || ||||| |  || |||||| ||||||||||  ||||||| | |||  |||||||||||||    
T  26728811 cctcttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggtacggtttcactggaaatctctacaaggc 26728910  T
Q  216 tcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctagg 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||| |||||||| || ||||||||||||    
T  26728911 tcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatcacttgacaatgctatcgaagagtctagg 26729010  T
Q  316 atttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
    |||||||||||||||||||||  ||||||||| | ||||||||    
T  26729011 atttttattcctgtgttttctcccaactatgcatattcttcat 26729053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 97 - 358
Target Start/End: Original strand, 26861454 - 26861715
Alignment:
Q  97 atggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggtttta 196  Q
    ||||||||||||||||||| |||||||||||| || || ||||||||||  |||||||| |||||||  || |||||  ||||||||||  | |||||||    
T  26861454 atggctatgcaatcaccttgctcttcctcttccatttcctatggattcaaataccaggtattcctcagtttcagaggaagtgacactcggtatggtttta 26861553  T
Q  197 ttggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaa 296  Q
      ||  ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||  ||||||||||||    
T  26861554 ccggtaatctctacaaggctcttactgacaagggaattcacaccttcatggatgatcgtgaacttcaaagaggggatgaaatcaaaagatcactcgacaa 26861653  T
Q  297 tgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
    |||||||||||||||||| ||||| |||||||||||||||  ||||||||||||||| ||||    
T  26861654 tgccattgaagagtctagaattttcattcctgtgttttctgccaactatgcctcttcgtcat 26861715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 91 - 353
Target Start/End: Original strand, 31284120 - 31284382
Alignment:
Q  91 aatctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacg 190  Q
    ||||||||||||||||||||| ||||||||||||||||||| || |||| |||||  ||||| || ||||| |  || || ||  ||||||||||  | |    
T  31284120 aatctcatggctatgcaatcatcttcctcttcctcttcaatttcctatgtattcaaataccaagtattccttagtttcaggggaagtgacactcggtatg 31284219  T
Q  191 gttttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcact 290  Q
    |||| |  ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| | |||||||    
T  31284220 gtttcaccggcaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatagtgaacttcaaagaggggatgaaatcacaccatcact 31284319  T
Q  291 cgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttc 353  Q
    ||||||||||||||||||||||||||||||||| || |||||||||  |||||||||||||||    
T  31284320 cgacaatgccattgaagagtctaggatttttatccccgtgttttctgccaactatgcctcttc 31284382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 93 - 358
Target Start/End: Complemental strand, 27677967 - 27677702
Alignment:
Q  93 tctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggt 192  Q
    ||||||||||||||||||||||||||||||| ||||||| || ||||  | ||  ||||| || |||||||| || |||||  ||||||||||  |||||    
T  27677967 tctcatggctatgcaatcaccttcctcttccacttcaatttcctatgagtacaaataccaagtattcctcaatttcagaggaagtgacactcggtacggt 27677868  T
Q  193 tttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcg 292  Q
    || |  ||| |||||||||||||||||  |||||||||||||||||||||||||||  ||| |||||||| ||||||||||||||||| | |||||||      
T  27677867 ttcaccggcaatctctacaaggctcttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttc 27677768  T
Q  293 acaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
     ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27677767 tcaaggccattgaagagtctaggatttttattgctgtgttttctatcaactatgcctcttcttcat 27677702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 93 - 356
Target Start/End: Complemental strand, 27718732 - 27718469
Alignment:
Q  93 tctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggt 192  Q
    |||||||||||| |||||||||||||| ||||||||| ||||  |||||||||||||||| || |||||||  ||||| |||  |||||||||  || ||    
T  27718732 tctcatggctatacaatcaccttcctcatcctcttcattctcccatggattcacttaccaagtgttcctcagttttaggggcactgacactcggcacagt 27718633  T
Q  193 tttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcg 292  Q
    ||||  ||  |||||||||||||||||||||||||||||||||| ||||||||||||||   ||| |||| |||||| |||||||||| | ||||||||     
T  27718632 tttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcc 27718533  T
Q  293 acaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttc 356  Q
     ||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  27718532 tcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctcttcttc 27718469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 95 - 356
Target Start/End: Complemental strand, 27611353 - 27611092
Alignment:
Q  95 tcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttt 194  Q
    ||||||||||||||| | |||||||||| |||||| | || ||||||||||||||||| || |||||||  ||||| |||  |||||||||  |||||||    
T  27611353 tcatggctatgcaattagcttcctcttcttcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttt 27611254  T
Q  195 tattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgac 294  Q
    ||  ||  |||||||||||||||||||||||||||||||||| ||||||||||||||   ||| |||| |||||| |||||||||| | ||||||||  |    
T  27611253 taccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttccaagaggagatgaaatcacaccatcactcctc 27611154  T
Q  295 aatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttc 356  Q
    || |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  27611153 aaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctcttcttc 27611092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 95 - 353
Target Start/End: Original strand, 26802278 - 26802536
Alignment:
Q  95 tcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttt 194  Q
    ||||||||||||| || |||||||| ||||||||| | || ||||||||||||||||| || |||||||  ||||| |||  |||||||||  |||||||    
T  26802278 tcatggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttt 26802377  T
Q  195 tattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgac 294  Q
    ||  ||| |||||||||||||||||| ||||||||||||||| ||||||||||||||   ||| |||| |||||| |||||||||| | ||||||||  |    
T  26802378 tacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatc 26802477  T
Q  295 aatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttc 353  Q
    || ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  26802478 aaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttc 26802536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 95 - 356
Target Start/End: Complemental strand, 27725196 - 27724935
Alignment:
Q  95 tcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttt 194  Q
    |||||||||| |||||||||||||| ||||||||| | || ||||||||||||||||| || ||||| |  ||||| |||  |||||||||  |||||||    
T  27725196 tcatggctatacaatcaccttcctcatcctcttcattttcctatggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttt 27725097  T
Q  195 tattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgac 294  Q
    ||  ||  |||||||||||||||||||||||||||||||||| ||||||||||||||   ||| |||| |||||| |||||||||| | ||||||||  |    
T  27725096 taccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctc 27724997  T
Q  295 aatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttc 356  Q
    || |||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||    
T  27724996 aaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctattcttc 27724935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 91 - 358
Target Start/End: Complemental strand, 27706757 - 27706490
Alignment:
Q  91 aatctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacg 190  Q
    ||||||||||||||||||||||||| ||||||| ||||||| || ||||  | ||  ||||| || |||||||  || ||||| |||||||||||  |||    
T  27706757 aatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaggtgacactcggtacg 27706658  T
Q  191 gttttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcact 290  Q
    |||| |  ||| |||||||||||||| ||  |||||||||||||||||||||||||||  ||| |||||||| |||| |||||||||||| | |||||||    
T  27706657 gtttcacaggcaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaagggatgaaatcacaccatcact 27706558  T
Q  291 cgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
       ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27706557 tctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcat 27706490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 95 - 353
Target Start/End: Original strand, 28780975 - 28781233
Alignment:
Q  95 tcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttt 194  Q
    ||||||||||||||| ||||||||||||||||||| | || | || |||||||||||| || |||||||  ||||| |||  |||||||||  |||||||    
T  28780975 tcatggctatgcaattaccttcctcttcctcttcattttcctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttt 28781074  T
Q  195 tattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgac 294  Q
    ||  ||| |||||||||||||||||||||||||||||||| | ||||||||||||||   ||| |||| |||||| |||||||||| | ||||||||  |    
T  28781075 taccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctc 28781174  T
Q  295 aatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttc 353  Q
    || ||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  28781175 aaggccatcgaagaatctaggatttttattcctgtgttttctatcaactatgccacttc 28781233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 93 - 358
Target Start/End: Complemental strand, 27698847 - 27698582
Alignment:
Q  93 tctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggt 192  Q
    |||||||||||| |||||||||||||| ||| ||||| | || ||||||||||||||||| || ||| |||  ||||| |||  |||||||||  |||||    
T  27698847 tctcatggctatacaatcaccttcctcatccacttcattttcctatggattcacttaccaagtgttcatcagttttaggggcactgacactcggcacggt 27698748  T
Q  193 tttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcg 292  Q
    ||||  ||  |||||||||||||||||||||||||||||||||| ||||||||||||||   ||| |||| |||||| |||||||||| | ||||||||     
T  27698747 tttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcc 27698648  T
Q  293 acaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
     ||| |||||||| || ||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  27698647 tcaaggccattgatgaatctaggatttttattcctgtgttttctctcaactatgcatcttcttcat 27698582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 93 - 356
Target Start/End: Complemental strand, 27593373 - 27593110
Alignment:
Q  93 tctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggt 192  Q
    ||||||||||||||||||||||||||||||| ||||||| || ||||  | ||  ||||| || |||||||  || |||||  ||||||||||  |||||    
T  27593373 tctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggt 27593274  T
Q  193 tttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcg 292  Q
    || |  ||| |||||||||||||||||||||||||||||||| ||||||||||||||||   ||  |||| ||||||  ||||||||| | |||||||      
T  27593273 ttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttc 27593174  T
Q  293 acaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttc 356  Q
     ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27593173 tcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttc 27593110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 91 - 358
Target Start/End: Original strand, 27678778 - 27679045
Alignment:
Q  91 aatctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacg 190  Q
    ||||||||||||||||||||||||||||||||| ||||||| || ||||  | ||  ||||| || |||||||  || |||||  ||||||||||  |||    
T  27678778 aatctcatggctatgcaatcaccttcctcttccacttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 27678877  T
Q  191 gttttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcact 290  Q
    |||| |  ||  |||||||||||||||||||||||||||||||| |||||||||||||| |   ||  |||| |||||| |||||||||| | |||||||    
T  27678878 gtttcaccgggaatctctacaaggctcttactgacaagggaatcaacaccttcattgataagaatggtcttcaaagaggagatgaaatcacaccatcact 27678977  T
Q  291 cgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
       ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27678978 tctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 27679045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 97 - 344
Target Start/End: Original strand, 28786116 - 28786363
Alignment:
Q  97 atggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggtttta 196  Q
    |||||||| |||||||||||||| ||||||||| | || ||||||||||||||||| || |||||||  ||||| |||  |||||||||  |||||||||    
T  28786116 atggctatacaatcaccttcctcatcctcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggtttta 28786215  T
Q  197 ttggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaa 296  Q
      ||  |||||||||||||||||||||||||||||||| | ||||||||||||||   ||| |||| |||||| |||||||||| | ||||||||  |||    
T  28786216 ccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaa 28786315  T
Q  297 tgccattgaagagtctaggatttttattcctgtgttttctatcaacta 344  Q
     ||||| ||||| |||||||||||||||||||||||||||||||||||    
T  28786316 ggccatcgaagaatctaggatttttattcctgtgttttctatcaacta 28786363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 97 - 344
Target Start/End: Original strand, 28792237 - 28792484
Alignment:
Q  97 atggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggtttta 196  Q
    |||||||| |||||||||||||| ||||||||| | || ||||||||||||||||| || |||||||  ||||| |||  |||||||||  |||||||||    
T  28792237 atggctatacaatcaccttcctcatcctcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggtttta 28792336  T
Q  197 ttggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaa 296  Q
      ||  |||||||||||||||||||||||||||||||| | ||||||||||||||   ||| |||| |||||| |||||||||| | ||||||||  |||    
T  28792337 ccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaa 28792436  T
Q  297 tgccattgaagagtctaggatttttattcctgtgttttctatcaacta 344  Q
     ||||| ||||| |||||||||||||||||||||||||||||||||||    
T  28792437 ggccatcgaagaatctaggatttttattcctgtgttttctatcaacta 28792484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 119 - 358
Target Start/End: Original strand, 26823700 - 26823939
Alignment:
Q  119 cttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttttattggccatctctacaaggctct 218  Q
    ||||||||||| | |||||||  ||||  ||||| || || ||||  |||||||||| |||||||||  | |  ||||  ||| ||||||||||||||||    
T  26823700 cttcctcttcagtttcatatgatttcaaataccaagtgtttctcagttttagaggcgctgacactcggtatgaatttaccggcaatctctacaaggctct 26823799  T
Q  219 tactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatt 318  Q
    ||| ||||||||||||||||||||  |||||||||||||||||| |||||||||| ||||| ||  ||||||| | ||||||||||||||||||||||||    
T  26823800 tacagacaagggaatccacaccttttttgatgatcgtgaacttcaaagaggggataaaatcgaacaatcactcaataatgccattgaagagtctaggatt 26823899  T
Q  319 tttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  26823900 tttattcctgtgttttctgccaactatgcctcttcttcat 26823939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 93 - 358
Target Start/End: Original strand, 27229066 - 27229331
Alignment:
Q  93 tctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggt 192  Q
    |||||||||||| |||||||||||||||||||||||| | || | ||||||||||||||| || ||||| |  ||||| |||  |||||||||  |||||    
T  27229066 tctcatggctatacaatcaccttcctcttcctcttcattttcctttggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggt 27229165  T
Q  193 tttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcg 292  Q
    ||||  ||| |||||||||||||||||||||||||||||||||| ||||||||||||||   ||| |||| |||||| || ||||||| | |||||||||    
T  27229166 tttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagacgaaatcacaccatcactcg 27229265  T
Q  293 acaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
     ||| |||||||| || ||| |||||||||||||  | ||||||  ||||||||| ||||||||||    
T  27229266 tcaaggccattgacgaatctcggatttttattcccatattttctgccaactatgcatcttcttcat 27229331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 93 - 356
Target Start/End: Complemental strand, 27605064 - 27604795
Alignment:
Q  93 tctcatggctatgcaatcaccttcctcttcctc------ttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgt 186  Q
    ||||||||||||||||| ||||||||| |||||      |||| | || |||| |||||||||||| || ||||| |  ||||| |||  |||||||||     
T  27605064 tctcatggctatgcaattaccttcctcatcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcga 27604965  T
Q  187 gacggttttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcat 286  Q
     |||||||||  ||| ||||||||||||||||||||||||||||||| || ||||||||||||||   ||| ||||||||||| |||||||||| | ||     
T  27604964 tacggttttaccggcaatctctacaaggctcttactgacaagggaattcataccttcattgatgaaaatgatcttcgaagaggagatgaaatcacaccag 27604865  T
Q  287 cactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttc 356  Q
    ||||   ||| |||||||| || || ||||||||||||||||||||||||||||| ||||||||||||||    
T  27604864 cacttctcaaggccattgatgaatccaggatttttattcctgtgttttctatcaaatatgcctcttcttc 27604795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 93 - 358
Target Start/End: Complemental strand, 27338418 - 27338153
Alignment:
Q  93 tctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggt 192  Q
    |||||||||||||||||||| |||||||||||||||||| || | ||| ||||  ||||| || |||||||  ||||| | |  |||||||| | |||||    
T  27338418 tctcatggctatgcaatcactttcctcttcctcttcaatttcctctgggttcaaataccatgtgttcctcagttttagggacattgacactctttacggt 27338319  T
Q  193 tttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcg 292  Q
    ||||  ||| |||||||||||||||||| ||||||||||||| | ||||||||||||||    || |||  |||||| ||||||| || | ||||||| |    
T  27338318 tttaccggcaatctctacaaggctcttattgacaagggaatcaaaaccttcattgatgacaacgatcttgaaagaggagatgaaagcacaccatcacttg 27338219  T
Q  293 acaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
     ||| ||||||||||||||||||||||| |||||  | ||||||   |||||||| ||||||||||    
T  27338218 tcaaggccattgaagagtctaggattttgattcccatattttctgcaaactatgcatcttcttcat 27338153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 93 - 358
Target Start/End: Complemental strand, 27399158 - 27398893
Alignment:
Q  93 tctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggt 192  Q
    |||||||||||||||||||| |||||||||||||||||| || | ||| ||||  ||||| || |||||||  ||||| | |  |||||||| | |||||    
T  27399158 tctcatggctatgcaatcactttcctcttcctcttcaatttcctctgggttcaaataccatgtgttcctcagttttagggacattgacactctttacggt 27399059  T
Q  193 tttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcg 292  Q
    ||||  ||| |||||||||||||||||| ||||||||||||| | ||||||||||||||    || |||  |||||| ||||||| || | ||||||| |    
T  27399058 tttaccggcaatctctacaaggctcttattgacaagggaatcaaaaccttcattgatgacaacgatcttgaaagaggagatgaaagcacaccatcacttg 27398959  T
Q  293 acaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
     ||| ||||||||||||||||||||||| |||||  | ||||||   |||||||| ||||||||||    
T  27398958 tcaaggccattgaagagtctaggattttgattcccatattttctgcaaactatgcatcttcttcat 27398893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 119 - 358
Target Start/End: Original strand, 26884023 - 26884262
Alignment:
Q  119 cttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttttattggccatctctacaaggctct 218  Q
    ||||||||||| | || ||||||||||||||||| || |||||||  || |||||  ||||||||||  | ||||| | |||  ||||||||||||||||    
T  26884023 cttcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctct 26884122  T
Q  219 tactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatt 318  Q
    |||| |||||||||||||||||||||||||||||  | | |||| ||||||    ||||||| | ||||||||  ||| ||||||||||| ||||| |||    
T  26884123 tactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 26884222  T
Q  319 tttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
    ||||||||  | ||||||| ||||||||| ||||||||||    
T  26884223 tttattccaatattttctaccaactatgcatcttcttcat 26884262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 93 - 358
Target Start/End: Original strand, 26655823 - 26656088
Alignment:
Q  93 tctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggt 192  Q
    |||||||||||| |||||||||||||| ||||||||| | || ||||| || |  ||||| || |||||||  ||||| |||  |||||| ||  |||||    
T  26655823 tctcatggctatacaatcaccttcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacacccggcacggt 26655922  T
Q  193 tttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcg 292  Q
    ||||  ||| |||||||||||||||||| ||| ||||||||||| || |||||||||||   ||| ||||  ||||| |||||||||| | |||||||||    
T  26655923 tttaccggcaatctctacaaggctcttattgataagggaatccatactttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcactcg 26656022  T
Q  293 acaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
      || ||||||||||| || ||||||||||||||  | ||||||  ||||||||| ||||||||||    
T  26656023 ttaaggccattgaagaatccaggatttttattcccatattttctgccaactatgcatcttcttcat 26656088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 93 - 358
Target Start/End: Original strand, 26761794 - 26762059
Alignment:
Q  93 tctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggt 192  Q
    |||||||||||| |||||||||||||| ||||||||| | || ||||| || |  ||||| || |||||||  ||||| |||  |||||| ||  |||||    
T  26761794 tctcatggctatacaatcaccttcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacacccggcacggt 26761893  T
Q  193 tttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcg 292  Q
    ||||  ||| |||||||||||||||||| ||| ||||||||||| || |||||||||||   ||| ||||  ||||| |||||||||| | |||||||||    
T  26761894 tttaccggcaatctctacaaggctcttattgataagggaatccatactttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcactcg 26761993  T
Q  293 acaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
      || ||||||||||| || ||||||||||||||  | ||||||  ||||||||| ||||||||||    
T  26761994 ttaaggccattgaagaatccaggatttttattcccatattttctgccaactatgcatcttcttcat 26762059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 141 - 358
Target Start/End: Complemental strand, 27531502 - 27531285
Alignment:
Q  141 attcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttttattggccatctctacaaggctcttactgacaagggaatccacacc 240  Q
    |||||||||||| || |||||||  ||||| ||||  ||||||||  |||||||||  ||  |||||||||||||||||||||||||||||||| | |||    
T  27531502 attcacttaccaagtgttcctcagttttaggggcgcggacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatctatacc 27531403  T
Q  241 ttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatca 340  Q
    |||||||||||   ||| |||| |||||| |||||||||| | |||||||  | |||||||||||| | ||||||||||||||||| || ||||||   |    
T  27531402 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactaaaaaatgccattgaaaaatctaggatttttattcccgtattttctgaaa 27531303  T
Q  341 actatgcctcttcttcat 358  Q
    ||||||| ||||||||||    
T  27531302 actatgcatcttcttcat 27531285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 95 - 356
Target Start/End: Original strand, 28139377 - 28139638
Alignment:
Q  95 tcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttt 194  Q
    |||||||| ||||| ||||||| |||||  ||||  |||| ||||| ||||| ||| | ||||| |||| ||| |||||| |||||||||||  ||||||    
T  28139377 tcatggctttgcaaccaccttcttcttctacttctttctcctatggcttcacatacgatgtctttctcagcttcagaggcagtgacactcgtttcggttt 28139476  T
Q  195 tattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgac 294  Q
     | |||  |||||||||| ||||||  ||||   ||||||||||| || ||||||||| | || |||| | |||| || |||||   | | |||||||      
T  28139477 cactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtgacgaaatatcaccgtcactcgta 28139576  T
Q  295 aatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttc 356  Q
    || ||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||||    
T  28139577 aaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttcttc 28139638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 203 - 358
Target Start/End: Original strand, 25579663 - 25579818
Alignment:
Q  203 atctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccat 302  Q
    ||||||| |||||||||  |||||||||||| |  |||||| ||||||||  ||| |||| |||||| |||||||||| | ||||||| | ||| |||||    
T  25579663 atctctataaggctcttgttgacaagggaattcgtaccttctttgatgataatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccat 25579762  T
Q  303 tgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
    |||||| |||||||||||||||||  | ||||||  ||||||||| ||||||||||    
T  25579763 tgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcat 25579818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 224 - 358
Target Start/End: Original strand, 28234529 - 28234663
Alignment:
Q  224 acaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttat 323  Q
    ||||||||||||||||||||||||||||  | || |||| | |||| |||||||| | | |||||||   ||| ||||||||||||||||||||||| ||    
T  28234529 acaagggaatccacaccttcattgatgacagggagcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcat 28234628  T
Q  324 tcctgtgttttctatcaactatgcctcttcttcat 358  Q
    |||||| || |||||||| ||||| ||||||||||    
T  28234629 tcctgtcttgtctatcaattatgcttcttcttcat 28234663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 203 - 358
Target Start/End: Original strand, 26142809 - 26142964
Alignment:
Q  203 atctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccat 302  Q
    ||||||| |||||||||  |||||||||||| |  || ||||||||||||  ||| |||  |||||| |||||||||| | ||||||| | ||| |||||    
T  26142809 atctctataaggctcttgttgacaagggaattcgtactttcattgatgataatgatcttgaaagaggagatgaaatcacaccatcacttgtcaaggccat 26142908  T
Q  303 tgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
    |||||| |||||||||||||||||  | ||||||  ||||||||| ||||||||||    
T  26142909 tgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcat 26142964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 115 - 358
Target Start/End: Original strand, 28180970 - 28181213
Alignment:
Q  115 tcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttttattggccatctctacaagg 214  Q
    ||||| ||||||||  |||| ||||||||||| ||  | |  ||||| | ||||||||| |||||||||||| | ||||||| |||  ||||| | |  |    
T  28180970 tcctcatcctcttccttctcctatggattcacctatgacgcgttccttagctttagaggtggtgacactcgttatggttttactggaaatctcaatagag 28181069  T
Q  215 ctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctag 314  Q
    |||||  ||||||||||||||  |||||||| |||||  | || |||| | |||| || ||||| | |||||||||   ||| |||||||||||||||||    
T  28181070 ctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaaataacatcatcacttttcaaggccattgaagagtctag 28181169  T
Q  315 gatttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
    |||||| ||||| || || |||||||| ||||| ||||||||||    
T  28181170 gattttcattcccgtcttgtctatcaattatgcttcttcttcat 28181213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 358
Target Start/End: Original strand, 28242711 - 28242903
Alignment:
Q  166 tttagaggcggtgacactcgtgacggttttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaa 265  Q
    ||||||||  ||||||||||| | ||||||| |||  |||||||||| | ||||  | | |||||||| | |||||||||||||||  | ||||||| |     
T  28242711 tttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagaacttccag 28242810  T
Q  266 gaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
    |||| ||  |||| | | |||||||   ||| ||||||||||||||||||||||| |||||||| || |||||||| ||||| ||||||||||    
T  28242811 gaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcat 28242903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 203 - 358
Target Start/End: Original strand, 25481686 - 25481841
Alignment:
Q  203 atctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccat 302  Q
    ||||||| |||||||||  |||||||||||| |  || |||||||||||   ||| |||| |||||| |||||||||| | ||||||| | ||| |||||    
T  25481686 atctctataaggctcttgttgacaagggaattcgtactttcattgatgaaaatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccat 25481785  T
Q  303 tgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
    |||||| |||||||||| ||||||  | ||||||  ||||||||| ||||||||||    
T  25481786 tgaagaatctaggatttgtattcccatattttctgccaactatgcatcttcttcat 25481841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 203 - 358
Target Start/End: Original strand, 26055870 - 26056025
Alignment:
Q  203 atctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccat 302  Q
    ||||||| |||||||||  ||||||||||||  | || |||||||||||   ||| |||| |||||| |||||||||| ||||||||| | ||| |||||    
T  26055870 atctctataaggctcttgttgacaagggaattaatactttcattgatgaaaatgatcttcaaagaggagatgaaatcacatcatcacttgtcaaggccat 26055969  T
Q  303 tgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
     ||||| ||| |||||||||||||  | ||||||  ||||||||| ||||||||||    
T  26055970 cgaagaatctgggatttttattcccatattttctgccaactatgcatcttcttcat 26056025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 203 - 358
Target Start/End: Original strand, 26075840 - 26075995
Alignment:
Q  203 atctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccat 302  Q
    ||||||| |||||||||  ||||||||||||  | || |||||||||||   ||| |||| |||||| |||||||||| ||||||||| | ||| |||||    
T  26075840 atctctataaggctcttgttgacaagggaattaatactttcattgatgaaaatgatcttcaaagaggagatgaaatcacatcatcacttgtcaaggccat 26075939  T
Q  303 tgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
     ||||| ||| |||||||||||||  | ||||||  ||||||||| ||||||||||    
T  26075940 cgaagaatctgggatttttattcccatattttctgccaactatgcatcttcttcat 26075995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 115 - 358
Target Start/End: Original strand, 28185222 - 28185465
Alignment:
Q  115 tcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttttattggccatctctacaagg 214  Q
    ||||| ||||||||  |||| ||||||||||| ||  | || ||||| | |||||||||  ||||||||||| |  |||||| |||  ||||| | |  |    
T  28185222 tcctcatcctcttccttctcctatggattcacctatgacgtgttccttagctttagaggtagtgacactcgttatcgttttactggaaatctcaatagag 28185321  T
Q  215 ctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctag 314  Q
    |||||  ||||||||||||||  |||||||| |||||  | || |||| | |||| || ||||| | |||||||||   ||| |||||||||||||||||    
T  28185322 ctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaaataacatcatcacttttcaaggccattgaagagtctag 28185421  T
Q  315 gatttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
    |||||| ||||| || || |||||||| ||||| ||||||||||    
T  28185422 gattttcattcccgtcttgtctatcaattatgcttcttcttcat 28185465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 178 - 353
Target Start/End: Complemental strand, 25507171 - 25507002
Alignment:
Q  178 gacactcgtgacggttttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaa 277  Q
    |||||||||  | |||||| | |||||||||||| ||||||   |||||||||||| ||||      |||||||| |||| ||   |||||| |||||||    
T  25507171 gacactcgtagccgttttactagccatctctacacggctctatatgacaagggaattcaca------ttgatgattgtgatctgaaaagaggagatgaaa 25507078  T
Q  278 tcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttc 353  Q
    ||| | ||||| ||| ||  ||||||||||| ||||||||||||||||| ||  ||||||||||||||||||||||    
T  25507077 tcacaccatcagtcgtcatcgccattgaagaatctaggatttttattccggttctttctatcaactatgcctcttc 25507002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 177 - 358
Target Start/End: Original strand, 28226868 - 28227049
Alignment:
Q  177 tgacactcgtgacggttttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaa 276  Q
    |||||||||| | ||||||| |||  |||||||||  | ||||  | | |||||||| ||||| ||| |||||||| | || |||| | |||| ||||||    
T  28226868 tgacactcgttatggttttactggaaatctctacagtgatctttgtaagaagggaattcacacattctttgatgatagagagcttcaaggaggtgatgaa 28226967  T
Q  277 atcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
    || | |||||||||   ||| | ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||    
T  28226968 ataacatcatcacttttcaaggtcattgaagaatctaggattttcattcctgtcttgtctatcaattatgcttcttcttcat 28227049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 358
Target Start/End: Original strand, 25538484 - 25538639
Alignment:
Q  203 atctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccat 302  Q
    ||||||| |||||||||  ||||||||||||    || ||||| ||||||  ||| |||  |||||| |||||||||| | ||||||| | ||| |||||    
T  25538484 atctctataaggctcttgttgacaagggaattagtactttcatagatgataatgatcttgaaagaggagatgaaatcacaccatcacttgtcaaggccat 25538583  T
Q  303 tgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
     ||||| ||||| |||||||||||  | ||||||  ||||||||| ||||||||||    
T  25538584 cgaagaatctagaatttttattcccatattttctgccaactatgcatcttcttcat 25538639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 91 - 356
Target Start/End: Complemental strand, 26342292 - 26342024
Alignment:
Q  91 aatctcatggctatgc---aatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtg 187  Q
    ||||||||||||||||   ||||| | ||||||| ||||||| |||||||||||||||| ||  | || |||||||| ||||| |||  || ||||||      
T  26342292 aatctcatggctatgctccaatcatcgtcctctttctcttcattctcatatggattcacatatgatgtgttcctcaattttaggggcattggcactcgct 26342193  T
Q  188 acggttttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatc 287  Q
    | ||||||| |||| || |||| |  |||||   ||||   ||| ||| |||||||||||||||| | || ||||   |||| ||  |||||| |  |||    
T  26342192 atggttttactggcaatatctatagagctctatgtgacggtggagtccgcaccttcattgatgatagggagcttcatggaggtgacaaaatcacacaatc 26342093  T
Q  288 actcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttc 356  Q
    ||| | ||| |||||||||||||| |||||||| |||||  | || || ||||||||||| ||||||||    
T  26342092 acttgtcaaagccattgaagagtccaggattttcattccaattttctcaatcaactatgcttcttcttc 26342024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 358
Target Start/End: Original strand, 28149912 - 28150036
Alignment:
Q  233 tccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgtt 332  Q
    ||||||||||||||||||||   || |||  | ||||||| ||||||| | ||||||||  ||| |||||||||||||| |||||||| |||||  | ||    
T  28149912 tccacaccttcattgatgatacggagctttaacgaggggacgaaatcacaccatcactct-caaggccattgaagagtccaggattttcattccaatctt 28150010  T
Q  333 ttctatcaactatgcctcttcttcat 358  Q
     |||||||||||| | ||||||||||    
T  28150011 ctctatcaactatacttcttcttcat 28150036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 358
Target Start/End: Original strand, 26048789 - 26048944
Alignment:
Q  203 atctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccat 302  Q
    ||||||| |||||||| | ||||||||||||    || ||||||||||||  ||| |||  |||||| |||||||||| | |   ||| | ||| |||||    
T  26048789 atctctataaggctctcattgacaagggaatttgtactttcattgatgataatgatcttgaaagaggagatgaaatcacacccaaacttgtcaaggccat 26048888  T
Q  303 tgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
     ||||| |||||||||||||||||  | ||||||  ||||||||| ||||||||||    
T  26048889 ggaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcat 26048944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 358
Target Start/End: Original strand, 26069958 - 26070113
Alignment:
Q  203 atctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccat 302  Q
    ||||||| |||||||| | ||||||||||||    || ||||||||||||  ||| |||  |||||| |||||||||| | |   ||| | ||| |||||    
T  26069958 atctctataaggctctcattgacaagggaatttgtactttcattgatgataatgatcttgaaagaggagatgaaatcacacccaaacttgtcaaggccat 26070057  T
Q  303 tgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
     ||||| |||||||||||||||||  | ||||||  ||||||||| ||||||||||    
T  26070058 ggaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcat 26070113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 354
Target Start/End: Complemental strand, 26893781 - 26893563
Alignment:
Q  136 tatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttttattggccatctctacaaggctcttactgacaagggaatcc 235  Q
    ||||||||||| ||| | ||||||||||| |||||||||  ||||||||||   |||||||  || ||||| || || ||||||  ||| |  ||||| |    
T  26893781 tatggattcacctacgatgtcttcctcaattttagaggctctgacactcgttttggttttacgggtcatctttataaagctctttgtgatagtggaattc 26893682  T
Q  236 acaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttc 335  Q
    |||||||||||||||||   || ||||  ||||| || ||||||  | |||||||   ||| || ||||||||||||| ||| |  ||||| ||  | ||    
T  26893681 acaccttcattgatgatacagagcttcatagaggtgacgaaatctcaccatcacttatcaaggcaattgaagagtctatgatatacattccagtcctctc 26893582  T
Q  336 tatcaactatgcctcttct 354  Q
    |||||||||||| ||||||    
T  26893581 tatcaactatgcttcttct 26893563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 251
Target Start/End: Complemental strand, 27665358 - 27665312
Alignment:
Q  205 ctctacaaggctcttactgacaagggaatccacaccttcattgatga 251  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||||    
T  27665358 ctctataaggctctttctgacaaaggaatccacaccttcattgatga 27665312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 356
Target Start/End: Original strand, 28325520 - 28325578
Alignment:
Q  298 gccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttc 356  Q
    ||||||||||||||||||||||| |||||| | || |||||||| ||||| ||||||||    
T  28325520 gccattgaagagtctaggattttcattcctattttgtctatcaattatgcttcttcttc 28325578  T

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Target: scaffold1254 (Bit Score: 125; Significance: 3e-64; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 93 - 353
Target Start/End: Complemental strand, 270 - 10
Alignment:
Q  93 tctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggt 192  Q
    |||||||||||||||||||||| |||||||||||||| | ||||||| |||||||||||| || ||||| |  ||||| |||  |||||||||  |||||    
T  270 tctcatggctatgcaatcacctccctcttcctcttcattttcatatgcattcacttaccaagtgttccttagttttaggggcactgacactcgccacggt 171  T
Q  193 tttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcg 292  Q
    ||||  ||| |||||||||||||||||||||||||||||||| | ||||||||||||||   ||| |||| |||||| |||||||||| | ||||||||     
T  170 tttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcc 71  T
Q  293 acaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttc 353  Q
     ||| ||||| ||||| ||||||||||||||||||||||||||||||||||| ||| ||||    
T  70 tcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacttc 10  T

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Target: scaffold0419 (Bit Score: 125; Significance: 3e-64; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 93 - 353
Target Start/End: Original strand, 7359 - 7619
Alignment:
Q  93 tctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggt 192  Q
    |||||||||||||||||||||| |||||||||||||| | ||||||| |||||||||||| || ||||| |  ||||| |||  |||||||||  |||||    
T  7359 tctcatggctatgcaatcacctccctcttcctcttcattttcatatgcattcacttaccaagtgttccttagttttaggggcactgacactcgccacggt 7458  T
Q  193 tttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcg 292  Q
    ||||  ||| |||||||||||||||||||||||||||||||| | ||||||||||||||   ||| |||| |||||| |||||||||| | ||||||||     
T  7459 tttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcc 7558  T
Q  293 acaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttc 353  Q
     ||| ||||| ||||| ||||||||||||||||||||||||||||||||||| ||| ||||    
T  7559 tcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacttc 7619  T

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Target: scaffold0349 (Bit Score: 125; Significance: 3e-64; HSPs: 3)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 95 - 358
Target Start/End: Complemental strand, 3773 - 3509
Alignment:
Q  95 tcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttt 194  Q
    |||||||||| |||||||||||||| ||||||||| | || ||||||||||||||||| || ||||| |  ||||| |||  |||||||||  |||||||    
T  3773 tcatggctatacaatcaccttcctcatcctcttcattttcctatggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttt 3674  T
Q  195 tattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgac 294  Q
    ||  ||  |||||||||||||||||||||||||||||||||| ||||||||||||||   ||| |||| |||||| |||||||||| | ||||||||  |    
T  3673 taccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctc 3574  T
Q  295 aatgccattgaagagtctaggatttttattcctgtgttttctatcaa-ctatgcctcttcttcat 358  Q
    || |||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3573 aaggccattgatgaatctaggatttttattcctgtgttttctatcaacctatgcctcttcttcat 3509  T

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Target: scaffold0349; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 93 - 349
Target Start/End: Complemental strand, 14708 - 14452
Alignment:
Q  93 tctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggt 192  Q
    |||||||||||| |||||||||||||| ||| ||||| | || ||||||||||||||||| || ||| |||  ||||| |||  |||||||||  |||||    
T  14708 tctcatggctatacaatcaccttcctcatccacttcattttcctatggattcacttaccaagtgttcatcagttttaggggcactgacactcggcacggt 14609  T
Q  193 tttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcg 292  Q
    ||||  ||  |||||||||||||||||||||||||||||||||| ||||||||||||||   ||| |||| |||||| |||||||||| | ||||||||     
T  14608 tttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcc 14509  T
Q  293 acaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcct 349  Q
     ||| |||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  14508 tcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcct 14452  T

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Target: scaffold0349; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 185
Target Start/End: Complemental strand, 8154 - 8062
Alignment:
Q  93 tctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcg 185  Q
    |||||||||||| |||||||||||||| ||||||||| ||||  |||||||||||||||| || |||||||  ||||| |||  |||||||||    
T  8154 tctcatggctatacaatcaccttcctcatcctcttcattctcccatggattcacttaccaagtgttcctcagttttaggggcactgacactcg 8062  T

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Target: scaffold0277 (Bit Score: 119; Significance: 1e-60; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 95 - 353
Target Start/End: Complemental strand, 13983 - 13725
Alignment:
Q  95 tcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttt 194  Q
    ||||||||||||||| ||||||||||||||||||| | || | || |||||||||||| || |||||||  ||||| |||  |||||||||  |||||||    
T  13983 tcatggctatgcaattaccttcctcttcctcttcattttcctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttt 13884  T
Q  195 tattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgac 294  Q
    ||  ||| |||||||||||||||||||||||||||||||| | ||||||||||||||   ||| |||| |||||| |||||||||| | ||||||||  |    
T  13883 taccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctc 13784  T
Q  295 aatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttc 353  Q
    || ||||| ||||| ||||||||||||||||||||||||||||||||||| ||| ||||    
T  13783 aaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacttc 13725  T

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Target: scaffold0277; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 97 - 356
Target Start/End: Complemental strand, 5020 - 4761
Alignment:
Q  97 atggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggtttta 196  Q
    |||||||| |||||||||||||| ||||||||| | || ||||||||||||||||| || |||||||  ||||| |||  |||||||||  |||||||||    
T  5020 atggctatacaatcaccttcctcatcctcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcattgacactcgccacggtttta 4921  T
Q  197 ttggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaa 296  Q
      ||  |||||||||||||||||||||||||||||||| | ||||||||||||||   ||| |||| |||||| |||||||||| | |||| |||  |||    
T  4920 ccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatccctccgcaa 4821  T
Q  297 tgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttc 356  Q
     |||||||| || ||||||||||||||||||||||||||||||  |||||||| ||||||    
T  4820 ggccattgatgaatctaggatttttattcctgtgttttctatcttctatgccttttcttc 4761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 59; Significance: 6e-25; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 224 - 358
Target Start/End: Original strand, 34690 - 34824
Alignment:
Q  224 acaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttat 323  Q
    ||||||||||||||||||||||||||||  | || |||| | |||| |||||||| | | |||||||   ||| ||||||||||||||||||||||| ||    
T  34690 acaagggaatccacaccttcattgatgacagggagcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcat 34789  T
Q  324 tcctgtgttttctatcaactatgcctcttcttcat 358  Q
    |||||| || |||||||| ||||| ||||||||||    
T  34790 tcctgtcttgtctatcaattatgcttcttcttcat 34824  T

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Target: scaffold0038; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 358
Target Start/End: Original strand, 42873 - 43065
Alignment:
Q  166 tttagaggcggtgacactcgtgacggttttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaa 265  Q
    ||||||||  ||||||||||| | ||||||| |||  |||||||||| | ||||  | | |||||||| | |||||||||||||||  | ||||||| |     
T  42873 tttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagaacttccag 42972  T
Q  266 gaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
    |||| ||  |||| | | |||||||   ||| ||||||||||||||||||||||| |||||||| || |||||||| ||||| ||||||||||    
T  42973 gaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcat 43065  T

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Target: scaffold0038; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 177 - 358
Target Start/End: Original strand, 27366 - 27547
Alignment:
Q  177 tgacactcgtgacggttttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaa 276  Q
    |||||||||| | ||||||| |||  |||||||||  | ||||  | | |||||||| ||||| ||| |||||||| | || |||| | |||| ||||||    
T  27366 tgacactcgttatggttttactggaaatctctacagtgatctttgtaagaagggaattcacacattctttgatgatagagagcttcaaggaggtgatgaa 27465  T
Q  277 atcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcat 358  Q
    || | |||||||||   ||| | ||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||    
T  27466 ataacatcatcacttttcaaggtcattgaagaatctaggattttcattcctgtcttgtctatcaattatgcttcttcttcat 27547  T

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Target: scaffold0038; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 356
Target Start/End: Original strand, 116835 - 116893
Alignment:
Q  298 gccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttc 356  Q
    ||||||||||||||||||||||| |||||| | || |||||||| ||||| ||||||||    
T  116835 gccattgaagagtctaggattttcattcctattttgtctatcaattatgcttcttcttc 116893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 121 - 358
Target Start/End: Complemental strand, 58607 - 58370
Alignment:
Q  121 tcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttttattggccatctctacaaggctctta 220  Q
    ||||||||  |||| ||||||||||| || || || ||||| | |||||||||  ||||||||||  | ||||||| |||  |||||||||  ||||||     
T  58607 tcctcttccttctcctatggattcacctatcacgtgttccttagctttagaggttgtgacactcgctatggttttactggaaatctctacagagctcttt 58508  T
Q  221 ctgacaagggaatccacaccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttt 320  Q
     ||||||||||||||  |||||||| |||||  | || |||| | |||| || ||||| | | |||||||   ||| |||||| ||||||||||||||||    
T  58507 gtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgacgaaataacaccatcacttttcaaggccattaaagagtctaggatttt 58408  T
Q  321 tattcctgtgttttctatcaactatgcctcttcttcat 358  Q
     ||||| || || |||||||||||||| ||||||||||    
T  58407 cattcccgtcttgtctatcaactatgcttcttcttcat 58370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 354
Target Start/End: Original strand, 3279666 - 3279783
Alignment:
Q  237 caccttcattgatgatcgtgaacttcgaagaggggatgaaatcaaatcatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttct 336  Q
    |||||||||||||||| | || ||||   |||| |||||||||| |  |||||| | ||| ||||| |||||||| | |||||||||||| || || |||    
T  3279666 caccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctct 3279765  T
Q  337 atcaactatgcctcttct 354  Q
    ||||||||||| ||||||    
T  3279766 atcaactatgcttcttct 3279783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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