View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7197_low_7 (Length: 247)
Name: NF7197_low_7
Description: NF7197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7197_low_7 |
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Alignment Details
Target: chr4 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 52864200 - 52863974
Alignment:
| Q |
1 |
caagattaactggttaagttttgaagttacttgacttcgatcttgagaactacgcctacgcctctctaaacccttttcatatggccacggcggtagagcc |
100 |
Q |
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| T |
52864200 |
caaggttaactggttaagtttttaagttacttgacttcgatcttcagaactacgcctacgcctctctaaacccttttcatatggccacggcggtagagcc |
52864101 |
T |
|
| Q |
101 |
aattccaaacggcactcttcaatcagaatcatatacaatctttgacgccgccgcaaatcctacggatgaatctgaatccgagaagagatggccaggttgg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52864100 |
aattccaaacggcactcttcaatcagaatcatatacaatctttgacgccgccgcgaatcctacggatgaatctgaatccgagaagagatggccaggttgg |
52864001 |
T |
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| Q |
201 |
cctggtcactgtgttttccggctaatt |
227 |
Q |
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| T |
52864000 |
cctggtcactgtgttttccggctaatt |
52863974 |
T |
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