View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7198_low_1 (Length: 229)
Name: NF7198_low_1
Description: NF7198
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7198_low_1 |
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Alignment Details
Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 45218814 - 45219036
Alignment:
| Q |
1 |
cctatttagagacaactaatcctaacttttgtccttaaaagatctctatctataattcatgtcttcaatattatatcaacataatgcttcttttgcccca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45218814 |
cctatttagagacaactaatcctaacttttgtccttaaaagatctctatctataattcatgtcttcaatattatatcaacataatgcttcttttgcccca |
45218913 |
T |
|
| Q |
101 |
caccacatgcggcatcattctacagacaatttaatttccaaaatactcaaagctatatcttttttaagcggaattatattgtttctctttcaagtggaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |
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| T |
45218914 |
caccacatgcggcatcattctacagacaatttaatttccaaaatactcaaagctatatctttttcaagtggaattatattgtttctctttcaagtggaat |
45219013 |
T |
|
| Q |
201 |
tactatttaatcataaagaatat |
223 |
Q |
| |
|
||||||||||||||||||||||| |
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|
| T |
45219014 |
tactatttaatcataaagaatat |
45219036 |
T |
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