View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7203_high_8 (Length: 310)

Name: NF7203_high_8
Description: NF7203
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7203_high_8
NF7203_high_8
[»] chr2 (33 HSPs)
chr2 (191-303)||(43490119-43490235)
chr2 (222-303)||(2997473-2997554)
chr2 (193-303)||(38732354-38732468)
chr2 (193-303)||(45097721-45097835)
chr2 (225-303)||(13365389-13365467)
chr2 (190-293)||(40613898-40614005)
chr2 (239-303)||(3034969-3035033)
chr2 (193-293)||(9058480-9058584)
chr2 (222-293)||(2533157-2533227)
chr2 (198-293)||(28863460-28863559)
chr2 (191-293)||(13438341-13438447)
chr2 (188-293)||(19930816-19930925)
chr2 (193-294)||(33436095-33436200)
chr2 (229-293)||(42257233-42257297)
chr2 (193-293)||(10249378-10249482)
chr2 (222-293)||(38273138-38273209)
chr2 (193-303)||(26891490-26891604)
chr2 (191-293)||(28381651-28381757)
chr2 (193-287)||(32505650-32505748)
chr2 (232-279)||(3737986-3738033)
chr2 (222-293)||(7465731-7465802)
chr2 (222-293)||(17473053-17473124)
chr2 (193-272)||(15428757-15428840)
chr2 (222-259)||(17820034-17820071)
chr2 (192-254)||(40701477-40701543)
chr2 (222-293)||(5574484-5574555)
chr2 (191-295)||(27864702-27864810)
chr2 (193-293)||(30915463-30915567)
chr2 (222-293)||(36168869-36168940)
chr2 (222-303)||(41575170-41575252)
chr2 (192-254)||(4060684-4060750)
chr2 (222-303)||(20700848-20700929)
chr2 (222-294)||(33436244-33436316)
[»] chr6 (14 HSPs)
chr6 (192-303)||(15508010-15508125)
chr6 (193-303)||(15990028-15990142)
chr6 (193-303)||(30341346-30341460)
chr6 (192-303)||(4231547-4231662)
chr6 (191-293)||(32869676-32869782)
chr6 (222-293)||(31109396-31109467)
chr6 (193-293)||(31976248-31976352)
chr6 (198-293)||(22880654-22880753)
chr6 (191-293)||(17598552-17598658)
chr6 (222-303)||(31953016-31953097)
chr6 (222-293)||(11427651-11427722)
chr6 (198-303)||(28536474-28536581)
chr6 (222-254)||(23128162-23128194)
chr6 (193-293)||(31110757-31110859)
[»] chr1 (28 HSPs)
chr1 (192-303)||(50590986-50591101)
chr1 (192-303)||(41608479-41608594)
chr1 (193-303)||(5958986-5959100)
chr1 (191-303)||(47748441-47748556)
chr1 (230-303)||(44332357-44332430)
chr1 (193-293)||(32813247-32813351)
chr1 (193-293)||(3000319-3000423)
chr1 (222-293)||(49811523-49811594)
chr1 (193-287)||(2581915-2582013)
chr1 (193-303)||(45044546-45044660)
chr1 (192-293)||(9474872-9474977)
chr1 (222-293)||(26440767-26440838)
chr1 (193-293)||(38595154-38595258)
chr1 (193-303)||(37926424-37926538)
chr1 (191-293)||(47452316-47452422)
chr1 (192-293)||(48716278-48716383)
chr1 (193-293)||(38632317-38632421)
chr1 (222-293)||(41758838-41758909)
chr1 (193-293)||(50630458-50630562)
chr1 (222-279)||(11152388-11152445)
chr1 (191-293)||(27564731-27564837)
chr1 (222-287)||(51898685-51898750)
chr1 (222-293)||(43165-43236)
chr1 (222-293)||(8346384-8346455)
chr1 (222-293)||(44548372-44548443)
chr1 (222-259)||(37649231-37649268)
chr1 (222-250)||(13414794-13414822)
chr1 (230-294)||(44454020-44454084)
[»] chr8 (27 HSPs)
chr8 (193-303)||(16383377-16383491)
chr8 (193-303)||(24307779-24307893)
chr8 (193-303)||(34307216-34307330)
chr8 (193-303)||(16056387-16056501)
chr8 (193-303)||(30479460-30479574)
chr8 (193-303)||(32032725-32032838)
chr8 (192-293)||(40423939-40424044)
chr8 (195-293)||(10621083-10621185)
chr8 (192-293)||(15048178-15048282)
chr8 (193-270)||(24307629-24307710)
chr8 (193-293)||(12831047-12831151)
chr8 (191-293)||(15197331-15197437)
chr8 (233-303)||(32707989-32708061)
chr8 (193-293)||(1179936-1180040)
chr8 (221-303)||(8841418-8841500)
chr8 (223-293)||(43414577-43414647)
chr8 (191-293)||(504117-504223)
chr8 (191-293)||(34012292-34012398)
chr8 (193-294)||(10284626-10284731)
chr8 (200-293)||(14547929-14548026)
chr8 (222-303)||(5957863-5957944)
chr8 (191-293)||(23122593-23122699)
chr8 (222-287)||(37038512-37038577)
chr8 (233-303)||(17443869-17443939)
chr8 (233-293)||(9122229-9122289)
chr8 (231-259)||(38229470-38229498)
chr8 (193-254)||(44507122-44507187)
[»] chr5 (20 HSPs)
chr5 (193-303)||(3921251-3921365)
chr5 (193-303)||(2252154-2252268)
chr5 (193-299)||(39688887-39688997)
chr5 (191-293)||(28177773-28177879)
chr5 (222-293)||(42414298-42414369)
chr5 (198-293)||(18520880-18520979)
chr5 (192-303)||(26720515-26720630)
chr5 (192-303)||(26990264-26990379)
chr5 (193-285)||(15409614-15409710)
chr5 (191-293)||(33149634-33149740)
chr5 (191-293)||(40145405-40145511)
chr5 (222-278)||(6679731-6679787)
chr5 (222-293)||(2740307-2740378)
chr5 (222-293)||(36732938-36733009)
chr5 (192-254)||(35785198-35785264)
chr5 (193-254)||(35943927-35943992)
chr5 (229-292)||(13811692-13811755)
chr5 (191-287)||(14831812-14831912)
chr5 (198-248)||(36875644-36875698)
chr5 (198-303)||(16327906-16328015)
[»] chr7 (27 HSPs)
chr7 (193-303)||(22343361-22343475)
chr7 (193-303)||(41915741-41915855)
chr7 (193-303)||(38044197-38044311)
chr7 (191-303)||(8238210-8238327)
chr7 (192-303)||(32564412-32564527)
chr7 (193-303)||(7727906-7728020)
chr7 (193-303)||(40846099-40846213)
chr7 (222-293)||(35522909-35522980)
chr7 (193-279)||(46374812-46374902)
chr7 (192-293)||(38267039-38267144)
chr7 (193-293)||(7389389-7389493)
chr7 (191-292)||(21234399-21234504)
chr7 (193-293)||(8080379-8080483)
chr7 (223-262)||(27744336-27744375)
chr7 (193-293)||(36361909-36362013)
chr7 (193-293)||(36362026-36362130)
chr7 (190-293)||(19329839-19329946)
chr7 (193-279)||(26296644-26296734)
chr7 (191-293)||(35137531-35137637)
chr7 (193-303)||(36208173-36208287)
chr7 (222-293)||(3434595-3434666)
chr7 (222-293)||(3694400-3694471)
chr7 (193-293)||(38837217-38837321)
chr7 (198-293)||(3784000-3784099)
chr7 (222-303)||(19436173-19436254)
chr7 (233-278)||(43317547-43317592)
chr7 (193-259)||(46033831-46033901)
[»] chr4 (30 HSPs)
chr4 (193-303)||(19670702-19670816)
chr4 (193-303)||(55475191-55475305)
chr4 (222-303)||(17983729-17983810)
chr4 (193-303)||(29547945-29548059)
chr4 (193-303)||(47986208-47986322)
chr4 (193-303)||(50813878-50813992)
chr4 (193-302)||(32766958-32767071)
chr4 (191-303)||(18924481-18924597)
chr4 (201-303)||(29589726-29589831)
chr4 (193-303)||(55079699-55079814)
chr4 (193-303)||(8343149-8343263)
chr4 (193-303)||(44536732-44536845)
chr4 (192-293)||(6034043-6034148)
chr4 (192-293)||(31910191-31910296)
chr4 (192-303)||(11511448-11511563)
chr4 (222-303)||(29977918-29977999)
chr4 (222-303)||(50052414-50052495)
chr4 (193-293)||(480443-480547)
chr4 (222-293)||(48183045-48183116)
chr4 (191-254)||(40574777-40574844)
chr4 (192-293)||(54473529-54473634)
chr4 (193-293)||(41236347-41236451)
chr4 (227-293)||(41823920-41823986)
chr4 (222-259)||(50526201-50526238)
chr4 (222-294)||(18769142-18769214)
chr4 (193-293)||(42044363-42044467)
chr4 (191-254)||(3481652-3481719)
chr4 (229-303)||(56300151-56300225)
chr4 (193-303)||(29239886-29240000)
chr4 (222-254)||(23608268-23608300)
[»] chr3 (28 HSPs)
chr3 (224-303)||(36331315-36331394)
chr3 (192-303)||(45058539-45058653)
chr3 (222-293)||(51419356-51419427)
chr3 (196-303)||(42823114-42823225)
chr3 (193-303)||(8076393-8076507)
chr3 (191-293)||(26141528-26141634)
chr3 (191-293)||(53982009-53982115)
chr3 (222-293)||(31456722-31456793)
chr3 (196-303)||(26754698-26754809)
chr3 (222-292)||(27714888-27714958)
chr3 (192-293)||(20764911-20765016)
chr3 (235-303)||(25395319-25395387)
chr3 (192-293)||(33644199-33644304)
chr3 (193-293)||(11347918-11348022)
chr3 (193-293)||(11907371-11907475)
chr3 (198-294)||(30801728-30801828)
chr3 (193-293)||(41189760-41189864)
chr3 (197-293)||(52629304-52629404)
chr3 (198-293)||(48587087-48587186)
chr3 (222-303)||(14623825-14623906)
chr3 (193-254)||(11095388-11095453)
chr3 (193-254)||(33118886-33118951)
chr3 (193-254)||(36707459-36707524)
chr3 (193-254)||(49607414-49607479)
chr3 (222-293)||(47531898-47531969)
chr3 (222-303)||(13898041-13898122)
chr3 (193-254)||(54868930-54868995)
chr3 (223-259)||(41080742-41080778)
[»] scaffold0018 (1 HSPs)
scaffold0018 (222-303)||(152531-152612)
[»] scaffold0316 (1 HSPs)
scaffold0316 (232-305)||(17097-17170)


Alignment Details
Target: chr2 (Bit Score: 84; Significance: 6e-40; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 191 - 303
Target Start/End: Original strand, 43490119 - 43490235
Alignment:
Q  191 atgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactt 286  Q
    ||||||||||||||||||| |||||||||||    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  43490119 atgagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 43490218  T
Q  287 tttctttcttcttctct 303  Q
    | |||||||||||||||    
T  43490219 tatctttcttcttctct 43490235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 2997554 - 2997473
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttctttcttcttctct 303  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  2997554 tacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctct 2997473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 193 - 303
Target Start/End: Original strand, 38732354 - 38732468
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||||| ||||||| |||    |||| || |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||     
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 38732453  T
Q  289 tctttcttcttctct 303  Q
    |||||||||||||||    
T  38732454 tctttcttcttctct 38732468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 193 - 303
Target Start/End: Complemental strand, 45097835 - 45097721
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||||| | |||||||||    |||| || |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||     
T  45097835 gagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 45097736  T
Q  289 tctttcttcttctct 303  Q
    |||||||||||||||    
T  45097735 tctttcttcttctct 45097721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 225 - 303
Target Start/End: Original strand, 13365389 - 13365467
Alignment:
Q  225 accctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttctttcttcttctct 303  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||    
T  13365389 accccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttctctttcttcttctct 13365467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 293
Target Start/End: Complemental strand, 40614005 - 40613898
Alignment:
Q  190 catgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacact 285  Q
    |||||||||||||||||| | | |||||||||    ||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||| |||||    
T  40614005 catgagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacact 40613906  T
Q  286 ttttcttt 293  Q
    || |||||    
T  40613905 ttctcttt 40613898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 239 - 303
Target Start/End: Complemental strand, 3035033 - 3034969
Alignment:
Q  239 acacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttctttcttcttctct 303  Q
    ||||||||||||||||||||| ||||| ||||||||||||||| ||||| |||||||||||||||    
T  3035033 acacaaaaatctgacatgtggtcatatggaccccgcacaagtatactttctctttcttcttctct 3034969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 193 - 293
Target Start/End: Original strand, 9058480 - 9058584
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    |||| |||||||||| | |||||||||||    ||||||||||||||||||||||||||||||||| || | ||| | ||||||||||||| |||||||     
T  9058480 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 9058579  T
Q  289 tcttt 293  Q
    |||||    
T  9058580 tcttt 9058584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 222 - 293
Target Start/End: Original strand, 2533157 - 2533227
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    |||| ||||||||||| |||||||||||||||| || |||| |||||||||||||||| |||||||||||||    
T  2533157 tacatcctttgacacc-acacaaaaatctgacacgtagccacatagaccccgcacaagcacactttttcttt 2533227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 293
Target Start/End: Original strand, 28863460 - 28863559
Alignment:
Q  198 atgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    |||||||||| | |||||||||||    ||||||||||||||||||||||||||||||||| || | ||  | ||||||||||||| ||||||| |||||    
T  28863460 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 28863559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 191 - 293
Target Start/End: Original strand, 13438341 - 13438447
Alignment:
Q  191 atgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactt 286  Q
    |||||| |||||||||| | |||||||||||    |||| |||||||||||||||||||||||||||| || | ||  | ||||||||||||| ||||||    
T  13438341 atgagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 13438440  T
Q  287 tttcttt 293  Q
    | |||||    
T  13438441 tctcttt 13438447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 293
Target Start/End: Complemental strand, 19930925 - 19930816
Alignment:
Q  188 cccatgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtaca 283  Q
    ||||||| | |||||||||| | |||||||||||    |||||||||||||| |||||||||||||||||| || | ||| | ||||||||||||  |||    
T  19930925 cccatgaataatgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacaca 19930826  T
Q  284 ctttttcttt 293  Q
    |||| |||||    
T  19930825 ctttctcttt 19930816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 294
Target Start/End: Complemental strand, 33436200 - 33436095
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    |||| |||||||||| | |||||||||||    ||||||||||||||||||||||||||||| ||| || | ||  | ||||||||||||| |||||||     
T  33436200 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 33436101  T
Q  289 tctttc 294  Q
    ||||||    
T  33436100 tctttc 33436095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 229 - 293
Target Start/End: Original strand, 42257233 - 42257297
Alignment:
Q  229 tttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    ||||||||||||| |||||||||||| ||||||| || ||||||||||||| ||||||| |||||    
T  42257233 tttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcacactttctcttt 42257297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 293
Target Start/End: Complemental strand, 10249482 - 10249378
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    |||| |||||||||| | |||||||||||    |||||| |||||||||||||||||||||||||| || | ||  | ||||||||||||| |||||||     
T  10249482 gagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 10249383  T
Q  289 tcttt 293  Q
    |||||    
T  10249382 tcttt 10249378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 38273209 - 38273138
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    |||||||||| |||||||||||||||||||||| || |||| || |||||||||| || ||||||| |||||    
T  38273209 tacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcacactttctcttt 38273138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 303
Target Start/End: Complemental strand, 26891604 - 26891490
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    |||||||||||||||   |||||||||||    ||||||| | |||||||||||||||||||||||||||| ||  | |||| || ||||| ||| |||     
T  26891604 gagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcacattttc 26891505  T
Q  289 tctttcttcttctct 303  Q
    |||||| ||||||||    
T  26891504 tctttcctcttctct 26891490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 293
Target Start/End: Complemental strand, 28381757 - 28381651
Alignment:
Q  191 atgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactt 286  Q
    |||||| |||||||||| | |||||||||||    |||||| || ||||||||||||||||||||||| || | || || ||| ||||||||| ||||||    
T  28381757 atgagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacactt 28381658  T
Q  287 tttcttt 293  Q
    | |||||    
T  28381657 tctcttt 28381651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 287
Target Start/End: Complemental strand, 32505748 - 32505650
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacacttt 287  Q
    |||| |||||||||| | |||||||||||    |||||| |||||||||||||||||||||||||| || | ||  | ||||||||||||| |||||||    
T  32505748 gagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 32505650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 3737986 - 3738033
Alignment:
Q  232 gacacccacacaaaaatctgacatgtggccatatagaccccgcacaag 279  Q
    |||||||||||||||||||||||||||| ||| | |||||||||||||    
T  3737986 gacacccacacaaaaatctgacatgtggtcatgtggaccccgcacaag 3738033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 7465802 - 7465731
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    ||||||||||||||||||||||||||||||||| || | ||  | |||||| |||||| ||||||| |||||    
T  7465802 tacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttctcttt 7465731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 293
Target Start/End: Original strand, 17473053 - 17473124
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    ||||||||||||||||||||||||||||||||| || | ||  | || |||||||||| ||||||| |||||    
T  17473053 tacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 17473124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 272
Target Start/End: Complemental strand, 15428840 - 15428757
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagacccc 272  Q
    ||||||||||||||||| | ||||| |||    ||||||| || |||| |||||||||||||||||||||||||| || |||||    
T  15428840 gagttatgatacataaacatccttatgtggccatacaccccttaacactcacacaaaaatctgacatgtggccatgtaaacccc 15428757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 17820071 - 17820034
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtgg 259  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  17820071 tacaccccttgacacccacacaaaaatctgacatgtgg 17820034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 254
Target Start/End: Original strand, 40701477 - 40701543
Alignment:
Q  192 tgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgaca 254  Q
    ||||| |||||||||| | |||||||||||    |||||| ||||||||||||||||||||||||||    
T  40701477 tgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgaca 40701543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 5574555 - 5574484
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    |||||||||||||||||||| |||||||||||| || | ||  | || |||||||||| ||||||| |||||    
T  5574555 tacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 5574484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 295
Target Start/End: Original strand, 27864702 - 27864810
Alignment:
Q  191 atgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactt 286  Q
    |||||| |||||||||| | ||||||| |||    |||||||||||||| |||||||||||||||||| ||   ||  | ||||||||| ||| ||||||    
T  27864702 atgagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacactt 27864801  T
Q  287 tttctttct 295  Q
    | |||||||    
T  27864802 tctctttct 27864810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 293
Target Start/End: Original strand, 30915463 - 30915567
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    |||| |||||||||| | |||||||||||    ||||||||||||| |||||| |||||||||||| || | ||  | ||||||| ||||| |||||||     
T  30915463 gagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 30915562  T
Q  289 tcttt 293  Q
    |||||    
T  30915563 tcttt 30915567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 293
Target Start/End: Original strand, 36168869 - 36168940
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    |||| ||||| || ||||||||||||| ||||| ||||||| || ||||||||||||| | ||||| |||||    
T  36168869 tacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagcatactttctcttt 36168940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 41575170 - 41575252
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagacccc-gcacaagtacactttttctttcttcttctct 303  Q
    ||||||||||||||  ||||||||||| |||||||||| ||| | ||||||  |||||| ||||||| |||||| ||| ||||    
T  41575170 tacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcacactttctctttcatctcctct 41575252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 254
Target Start/End: Original strand, 4060684 - 4060750
Alignment:
Q  192 tgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgaca 254  Q
    ||||| |||||||||| | |||||||||||    |||||| ||||||| ||||||||||||||||||    
T  4060684 tgagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgaca 4060750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 20700848 - 20700929
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttctttcttcttctct 303  Q
    ||||||||||||| || |||||||||||||||| || | ||  | ||||||||| ||| ||||||| |||||| ||| ||||    
T  20700848 tacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttctctttcctctcctct 20700929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 294
Target Start/End: Original strand, 33436244 - 33436316
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttctttc 294  Q
    |||||| ||||||||||||| |||||||||||| ||| |||| | |||   ||||||| ||||||| ||||||    
T  33436244 tacaccttttgacacccacataaaaatctgacacgtgaccatgtggactttgcacaagcacactttctctttc 33436316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 3e-39; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 192 - 303
Target Start/End: Complemental strand, 15508125 - 15508010
Alignment:
Q  192 tgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacacttt 287  Q
    |||||||||||||||||| |||||||||||    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  15508125 tgagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 15508026  T
Q  288 ttctttcttcttctct 303  Q
     |||||||||||||||    
T  15508025 ctctttcttcttctct 15508010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 193 - 303
Target Start/End: Complemental strand, 15990142 - 15990028
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||||| |||||||||||    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  15990142 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 15990043  T
Q  289 tctttcttcttctct 303  Q
    |||||||||||||||    
T  15990042 tctttcttcttctct 15990028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 193 - 303
Target Start/End: Complemental strand, 30341460 - 30341346
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||||| |||||||||||    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  30341460 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 30341361  T
Q  289 tctttcttcttctct 303  Q
    |||||||||||||||    
T  30341360 tctttcttcttctct 30341346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 192 - 303
Target Start/End: Original strand, 4231547 - 4231662
Alignment:
Q  192 tgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacacttt 287  Q
    ||||||||||| |||||| | | |||||||    ||||||| ||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  4231547 tgagttatgattcataaacatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacacttt 4231646  T
Q  288 ttctttcttcttctct 303  Q
     |||||||||||||||    
T  4231647 ctctttcttcttctct 4231662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 191 - 293
Target Start/End: Original strand, 32869676 - 32869782
Alignment:
Q  191 atgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactt 286  Q
    |||||| | |||||||| | |||||||||||    ||||||||||||||||||||||||||||||||| || | ||  | ||||||||||||| ||||||    
T  32869676 atgagtaaagatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 32869775  T
Q  287 tttcttt 293  Q
    | |||||    
T  32869776 tctcttt 32869782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 31109467 - 31109396
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    |||||||||||||| |||||||||||||||||| || | ||  ||||||||||| ||||||||||| |||||    
T  31109467 tacaccctttgacatccacacaaaaatctgacacgtagtcacgtagaccccgcaaaagtacactttctcttt 31109396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 293
Target Start/End: Original strand, 31976248 - 31976352
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||| | | |||||||||    || ||||||| |||||||||||||||||||||| |||| || ||  |||||||||||| |||||||     
T  31976248 gagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacactttc 31976347  T
Q  289 tcttt 293  Q
    |||||    
T  31976348 tcttt 31976352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 198 - 293
Target Start/End: Complemental strand, 22880753 - 22880654
Alignment:
Q  198 atgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    |||||||||| | |||||||||||    ||||||||||||||||||||||||| ||||||| || | ||  | ||||||||||||| ||||||| |||||    
T  22880753 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 22880654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 293
Target Start/End: Original strand, 17598552 - 17598658
Alignment:
Q  191 atgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactt 286  Q
    |||||| |||||||||| | |||||||||||    |||| | |||||||||||||||||||||||||| || | ||  | ||||||||||||| ||||||    
T  17598552 atgagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacactt 17598651  T
Q  287 tttcttt 293  Q
    | |||||    
T  17598652 tctcttt 17598658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 31953097 - 31953016
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttctttcttcttctct 303  Q
    ||||||| |||||||||||| ||||||||||||||||  ||| | |||| | |||||  ||||||| |||||| ||||||||    
T  31953097 tacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacactttctctttcatcttctct 31953016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 293
Target Start/End: Original strand, 11427651 - 11427722
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    |||| |||||||||||||||||||||||||||| || | ||  | || |||||||||| ||||||| |||||    
T  11427651 tacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 11427722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 303
Target Start/End: Complemental strand, 28536581 - 28536474
Alignment:
Q  198 atgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    |||||||||||| | |||||||||    |||| || |||||||||||||||||||||||||   || ||| | |||||| |||||| ||||||| |||||    
T  28536581 atgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgaca--cggtcatgtggaccccacacaagcacactttctcttt 28536484  T
Q  294 cttcttctct 303  Q
      ||||||||    
T  28536483 tatcttctct 28536474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 254
Target Start/End: Complemental strand, 23128194 - 23128162
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgaca 254  Q
    |||| ||||||||||||||||||||||||||||    
T  23128194 tacatcctttgacacccacacaaaaatctgaca 23128162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 293
Target Start/End: Complemental strand, 31110859 - 31110757
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||| | | |||||||||    ||||||||||||||| ||||  ||||||||||| ||  ||| || ||||| ||||||| |||||||     
T  31110859 gagttatgatacatagacatccttaggtggcaatacaccctttgacactcaca--aaaatctgacacgtaaccacatggaccctgcacaagcacactttc 31110762  T
Q  289 tcttt 293  Q
    |||||    
T  31110761 tcttt 31110757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 3e-39; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 192 - 303
Target Start/End: Complemental strand, 50591101 - 50590986
Alignment:
Q  192 tgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacacttt 287  Q
    |||||||||||||||||| |||||||||||    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50591101 tgagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 50591002  T
Q  288 ttctttcttcttctct 303  Q
     |||||||||||||||    
T  50591001 ctctttcttcttctct 50590986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 192 - 303
Target Start/End: Complemental strand, 41608594 - 41608479
Alignment:
Q  192 tgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacacttt 287  Q
    |||||||||||||||||| | |||||||||    ||||||| ||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  41608594 tgagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaagtacacttt 41608495  T
Q  288 ttctttcttcttctct 303  Q
     |||||||||||||||    
T  41608494 ctctttcttcttctct 41608479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 193 - 303
Target Start/End: Complemental strand, 5959100 - 5958986
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||||| ||||||| |||    ||||||  |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||     
T  5959100 gagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 5959001  T
Q  289 tctttcttcttctct 303  Q
    |||||||||||||||    
T  5959000 tctttcttcttctct 5958986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 191 - 303
Target Start/End: Original strand, 47748441 - 47748556
Alignment:
Q  191 atgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactt 286  Q
    |||||||||||||||||||||||||||||||    ||||||||| |||||||| | ||||||||||||||||||||||| || |||||||||||| ||||    
T  47748441 atgagttatgatacataaatacccttaggtggcaatacaccctt-gacacccatataaaaatctgacatgtggccatatggatcccgcacaagtatactt 47748539  T
Q  287 tttctttcttcttctct 303  Q
    | |||||||||||||||    
T  47748540 tctctttcttcttctct 47748556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 230 - 303
Target Start/End: Complemental strand, 44332430 - 44332357
Alignment:
Q  230 ttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttctttcttcttctct 303  Q
    |||||||||||| ||||||||||||||||||| ||| ||||||||||||||| ||||| |||||||||||||||    
T  44332430 ttgacacccacataaaaatctgacatgtggccctatggaccccgcacaagtatactttctctttcttcttctct 44332357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 193 - 293
Target Start/End: Original strand, 32813247 - 32813351
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||| | | |||||||||    |||||||||| |||||||||||||||||||||| |||| || || ||||||||||||| |||||||     
T  32813247 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacactttc 32813346  T
Q  289 tcttt 293  Q
    |||||    
T  32813347 tcttt 32813351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 193 - 293
Target Start/End: Original strand, 3000319 - 3000423
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    |||| |||||||||||| |||||||||||    ||||||||||||||||||||||||||||||||| || | ||  | ||||||| ||||| |||||||     
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 3000418  T
Q  289 tcttt 293  Q
    |||||    
T  3000419 tcttt 3000423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 49811594 - 49811523
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    |||||| ||||||| |||||||||||||||||| || ||||||||||| ||||||||| ||||||| |||||    
T  49811594 tacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcacactttctcttt 49811523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 193 - 287
Target Start/End: Original strand, 2581915 - 2582013
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacacttt 287  Q
    |||| |||||||||| | |||||||||||    ||||||||||||||||||||||||||||||||| || | ||  | ||||||||||||| |||||||    
T  2581915 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 2582013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 193 - 303
Target Start/End: Complemental strand, 45044660 - 45044546
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||| ||  |||||||||    |||||| ||||||||||| ||||||||||||||||| |||| || ||||||||||||  ||| |||     
T  45044660 gagttatgatacatacatttccttaggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacacattttc 45044561  T
Q  289 tctttcttcttctct 303  Q
    |||||  ||||||||    
T  45044560 tcttttctcttctct 45044546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 293
Target Start/End: Complemental strand, 9474977 - 9474872
Alignment:
Q  192 tgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacacttt 287  Q
    ||||| |||||||||| | |||||||||||    ||||||||||||||||||||||||||||||||| || | ||  | ||||||||||||  |||||||    
T  9474977 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacacttt 9474878  T
Q  288 ttcttt 293  Q
     |||||    
T  9474877 ctcttt 9474872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 293
Target Start/End: Original strand, 26440767 - 26440838
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    |||||||||| |||||||||||||||||||||| ||||||| || || |||||| ||| ||||||| |||||    
T  26440767 tacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcacactttctcttt 26440838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 293
Target Start/End: Original strand, 38595154 - 38595258
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    |||| |||||||||||| ||| |||||||    ||||||||||||||||||||||||||||||||| || | ||  | ||||||| ||||| |||||||     
T  38595154 gagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 38595253  T
Q  289 tcttt 293  Q
    |||||    
T  38595254 tcttt 38595258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 303
Target Start/End: Complemental strand, 37926538 - 37926424
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||| ||| | |||||||    |||| | ||| ||||||||| |||||||||||| ||||||| || || |||| |||||||||||||     
T  37926538 gagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacactttc 37926439  T
Q  289 tctttcttcttctct 303  Q
    |||||  ||||||||    
T  37926438 tcttttctcttctct 37926424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 293
Target Start/End: Complemental strand, 47452422 - 47452316
Alignment:
Q  191 atgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactt 286  Q
    |||||| |||||||||| | |||||||||||    ||||||||||||||||||||||||||||| ||| || | ||  | || |||||||||| ||||||    
T  47452422 atgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactt 47452323  T
Q  287 tttcttt 293  Q
    | |||||    
T  47452322 tctcttt 47452316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 293
Target Start/End: Complemental strand, 48716383 - 48716278
Alignment:
Q  192 tgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacacttt 287  Q
    ||||| |||||||||| | |||||||||||    |||||| ||||||| |||||||||||||||||| || | ||  | ||||||||||||| |||||||    
T  48716383 tgagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 48716284  T
Q  288 ttcttt 293  Q
     |||||    
T  48716283 atcttt 48716278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 293
Target Start/End: Complemental strand, 38632421 - 38632317
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    |||| |||||||||| | |||||||||||    |||||| ||| ||| |||||||||||||||||| || | ||  | ||||||||||||| ||||||||    
T  38632421 gagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttt 38632322  T
Q  289 tcttt 293  Q
    |||||    
T  38632321 tcttt 38632317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 293
Target Start/End: Original strand, 41758838 - 41758909
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    |||||||||||||| |||||||||||||||||| || | || || ||||||||||||  ||||||| |||||    
T  41758838 tacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacactttctcttt 41758909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 293
Target Start/End: Original strand, 50630458 - 50630562
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    |||| |||||||||| |||||||||||||    |||| ||||||  |||||||||||||||||||| || | ||  | ||||||||||||| |||||||     
T  50630458 gagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 50630557  T
Q  289 tcttt 293  Q
    |||||    
T  50630558 tcttt 50630562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 279
Target Start/End: Complemental strand, 11152445 - 11152388
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaag 279  Q
    ||||||||| |||| |||||||||||||||||| || | ||| |||||||||||||||    
T  11152445 tacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaag 11152388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 293
Target Start/End: Complemental strand, 27564837 - 27564731
Alignment:
Q  191 atgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactt 286  Q
    |||||| |||||||||| | | |||||||||    |||||| |||||||||||||||||||||||||| ||   ||  | ||||||||||||| ||||||    
T  27564837 atgagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactt 27564738  T
Q  287 tttcttt 293  Q
    | |||||    
T  27564737 tctcttt 27564731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 51898750 - 51898685
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacacttt 287  Q
    ||||||||||||||||||||||||||||||||| || | ||  | || |||||||||| |||||||    
T  51898750 tacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 51898685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 293
Target Start/End: Original strand, 43165 - 43236
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    |||| |||||||||||||||||||||||||||| || | ||  | ||| ||||||||| ||||||| |||||    
T  43165 tacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttctcttt 43236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 8346455 - 8346384
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    |||||| |||||||||||||||||||||||||| || | ||  | ||||| ||||||| ||||||| |||||    
T  8346455 tacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacactttctcttt 8346384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 44548443 - 44548372
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    |||||| ||||| |||||||||||||||||||| || | ||  | ||||||||||||| ||||||| |||||    
T  44548443 tacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 44548372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 259
Target Start/End: Original strand, 37649231 - 37649268
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtgg 259  Q
    ||||| ||||||||||||||||||||||||||| ||||    
T  37649231 tacactctttgacacccacacaaaaatctgacacgtgg 37649268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 250
Target Start/End: Original strand, 13414794 - 13414822
Alignment:
Q  222 tacaccctttgacacccacacaaaaatct 250  Q
    |||||||||||||||||||||||||||||    
T  13414794 tacaccctttgacacccacacaaaaatct 13414822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Original strand, 44454020 - 44454084
Alignment:
Q  230 ttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttctttc 294  Q
    |||| |||||||||||||||||||||||||  |  | || ||| |||||| ||||||||||||||    
T  44454020 ttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcacactttttctttc 44454084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 1e-38; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 193 - 303
Target Start/End: Original strand, 16383377 - 16383491
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||||| |||||||||||    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  16383377 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 16383476  T
Q  289 tctttcttcttctct 303  Q
    |||||||||||||||    
T  16383477 tctttcttcttctct 16383491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 193 - 303
Target Start/End: Complemental strand, 24307893 - 24307779
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||||| |||||||||||    |||| || ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||     
T  24307893 gagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacactttc 24307794  T
Q  289 tctttcttcttctct 303  Q
    |||||||||||||||    
T  24307793 tctttcttcttctct 24307779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 193 - 303
Target Start/End: Original strand, 34307216 - 34307330
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||||| |||||||||||    ||||||| |||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||     
T  34307216 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaagtacactttc 34307315  T
Q  289 tctttcttcttctct 303  Q
    |||||||||||||||    
T  34307316 tctttcttcttctct 34307330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 193 - 303
Target Start/End: Complemental strand, 16056501 - 16056387
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||||| | ||||| |||    |||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  16056501 gagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 16056402  T
Q  289 tctttcttcttctct 303  Q
    |||||||||||||||    
T  16056401 tctttcttcttctct 16056387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 193 - 303
Target Start/End: Complemental strand, 30479574 - 30479460
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||||| |||||||||||    |||||||||||||| ||||| |||||||||||||||||| |||| |||| ||||||||||||||||     
T  30479574 gagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgacatgtggctatatggacctcgcacaagtacactttc 30479475  T
Q  289 tctttcttcttctct 303  Q
    |||||||||||||||    
T  30479474 tctttcttcttctct 30479460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 193 - 303
Target Start/End: Original strand, 32032725 - 32032838
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||||| |||||||||||    |||| || |||||| ||||||||||||||||||||||||||||| || || |||||||||||||||     
T  32032725 gagttatgatacataaacacccttaggtggcaatacatcc-ttgacatccacacaaaaatctgacatgtggccatatggatcctgcacaagtacactttc 32032823  T
Q  289 tctttcttcttctct 303  Q
    ||||||| |||||||    
T  32032824 tctttctccttctct 32032838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 192 - 293
Target Start/End: Complemental strand, 40424044 - 40423939
Alignment:
Q  192 tgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacacttt 287  Q
    ||||| |||||||||| |||||||||||||    |||||||||||||| |||||||||||||||||| || | ||| | ||||||||||||| |||||||    
T  40424044 tgagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttt 40423945  T
Q  288 ttcttt 293  Q
     |||||    
T  40423944 ctcttt 40423939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 293
Target Start/End: Complemental strand, 10621185 - 10621083
Alignment:
Q  195 gttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttc 290  Q
    ||||||||||||| | | |||||||||    ||||||||||||||||||||||||||||||||| || |||| || || |||||||||| ||||||| ||    
T  10621185 gttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctc 10621086  T
Q  291 ttt 293  Q
    |||    
T  10621085 ttt 10621083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 293
Target Start/End: Complemental strand, 15048282 - 15048178
Alignment:
Q  192 tgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacacttt 287  Q
    |||||||||||||||| | | |||||||||    |||||||||||||||| |||||||||||||||| || |||| || ||||||||||||| |||||||    
T  15048282 tgagttatgatacatagacatccttaggtggcaatacaccctttgacacc-acacaaaaatctgacacgtagccacatggaccccgcacaagcacacttt 15048184  T
Q  288 ttcttt 293  Q
     |||||    
T  15048183 ctcttt 15048178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 24307629 - 24307710
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagacc 270  Q
    ||||||||||||||||| |||||||||||    |||| || ||||||||||||||||||||||| |||||||||||| ||||    
T  24307629 gagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctgatatgtggccatatggacc 24307710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 193 - 293
Target Start/End: Original strand, 12831047 - 12831151
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    |||| |||||||||| | |||||||||||    ||||||||||||||||||||||||||||||||| || | ||  | ||||||||||||| |||||||     
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 12831146  T
Q  289 tcttt 293  Q
    |||||    
T  12831147 tcttt 12831151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 191 - 293
Target Start/End: Original strand, 15197331 - 15197437
Alignment:
Q  191 atgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactt 286  Q
    |||||| |||||||||| | || ||||||||    ||||||||||||||||||||||||||||||||| || | ||  | ||||||||||||| ||||||    
T  15197331 atgagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 15197430  T
Q  287 tttcttt 293  Q
    | |||||    
T  15197431 tctcttt 15197437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 233 - 303
Target Start/End: Complemental strand, 32708061 - 32707989
Alignment:
Q  233 acacccacacaaaaatctgacatgtggccatatagaccccgcacaagt--acactttttctttcttcttctct 303  Q
    ||||||| |||||||||||| ||||||| |||| ||||||||||||||  ||||||| |||||||||||||||    
T  32708061 acacccatacaaaaatctgagatgtggctatatggaccccgcacaagtacacactttctctttcttcttctct 32707989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 293
Target Start/End: Complemental strand, 1180040 - 1179936
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    |||| |||||||||| | |||||||||||    ||||||||||||||||||||||||||||||||| || | ||| | ||  ||||||||| |||||||     
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttc 1179941  T
Q  289 tcttt 293  Q
    |||||    
T  1179940 tcttt 1179936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 303
Target Start/End: Complemental strand, 8841500 - 8841418
Alignment:
Q  221 gtacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttctttcttcttctct 303  Q
    |||||||||||||||||||||||||||||| ||| || | ||  | ||||||||||||| ||||||| |||||| ||| ||||    
T  8841500 gtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctctttcctctcctct 8841418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 293
Target Start/End: Complemental strand, 43414647 - 43414577
Alignment:
Q  223 acaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    |||||||||||||||||||||||||||| ||| |||| || || || |||||||||| ||||||| |||||    
T  43414647 acaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacactttctcttt 43414577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 293
Target Start/End: Complemental strand, 504223 - 504117
Alignment:
Q  191 atgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactt 286  Q
    |||||| |||||||||| | |||||||||||    |||||| |||||||||||||||||||||||||| || | ||  | ||||||||||||| |||| |    
T  504223 atgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacat 504124  T
Q  287 tttcttt 293  Q
    | |||||    
T  504123 tctcttt 504117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 293
Target Start/End: Complemental strand, 34012398 - 34012292
Alignment:
Q  191 atgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactt 286  Q
    |||||| |||||||||| | |||||||||||    ||||||||||||||||||||||||||| ||||| || | ||  | || |||||||||| ||||||    
T  34012398 atgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactt 34012299  T
Q  287 tttcttt 293  Q
    | |||||    
T  34012298 tctcttt 34012292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 294
Target Start/End: Complemental strand, 10284731 - 10284626
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||| | ||||||| |||    ||||| ||||||||||||||||||||| ||||| || | ||  | ||||||||||||| |||||||     
T  10284731 gagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacactttc 10284632  T
Q  289 tctttc 294  Q
    ||||||    
T  10284631 tctttc 10284626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 200 - 293
Target Start/End: Original strand, 14547929 - 14548026
Alignment:
Q  200 gatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    |||||||| | |||||||||||    |||||| |||||||||||||||||||||||||| || | ||  | ||||||||||||| ||||||| |||||    
T  14547929 gatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 14548026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 5957863 - 5957944
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttctttcttcttctct 303  Q
    ||||||||||||||||||||||||||||||||| || | ||  | || |||||||||  ||||||| |||||| ||| ||||    
T  5957863 tacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacactttctctttcctctcctct 5957944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 293
Target Start/End: Complemental strand, 23122699 - 23122593
Alignment:
Q  191 atgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactt 286  Q
    |||||| |||||||||| | ||||||| |||    |||||| |||||||||||||||||||||||||| || | ||  | ||||||||| ||| ||||||    
T  23122699 atgagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactt 23122600  T
Q  287 tttcttt 293  Q
    | |||||    
T  23122599 tctcttt 23122593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 37038512 - 37038577
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacacttt 287  Q
    ||||||||||||||||||||||||||||||||| || | ||  | || |||||||||| |||||||    
T  37038512 tacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 37038577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 303
Target Start/End: Original strand, 17443869 - 17443939
Alignment:
Q  233 acacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttctttcttcttctct 303  Q
    |||| |||||||||||||||||||| | ||| | |||||| |||||  ||||||| |||||| ||||||||    
T  17443869 acactcacacaaaaatctgacatgtagtcatgtggaccccacacaaagacactttctctttcatcttctct 17443939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 293
Target Start/End: Original strand, 9122229 - 9122289
Alignment:
Q  233 acacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    ||||||||||||||||||||||||| | ||  | || |||||||||| ||||||| |||||    
T  9122229 acacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctcttt 9122289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 259
Target Start/End: Original strand, 38229470 - 38229498
Alignment:
Q  231 tgacacccacacaaaaatctgacatgtgg 259  Q
    |||||||||||||||||||||||||||||    
T  38229470 tgacacccacacaaaaatctgacatgtgg 38229498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 44507187 - 44507122
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgaca 254  Q
    |||| |||||||||| | |||||||||||    ||||| |||| ||||||||||||||||||||||    
T  44507187 gagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgaca 44507122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 1e-38; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 193 - 303
Target Start/End: Complemental strand, 3921365 - 3921251
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||||| |||||||||||    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  3921365 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 3921266  T
Q  289 tctttcttcttctct 303  Q
    |||||||||||||||    
T  3921265 tctttcttcttctct 3921251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 193 - 303
Target Start/End: Complemental strand, 2252268 - 2252154
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||||| | |||||||||    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  2252268 gagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 2252169  T
Q  289 tctttcttcttctct 303  Q
    |||||||||||||||    
T  2252168 tctttcttcttctct 2252154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 193 - 299
Target Start/End: Complemental strand, 39688997 - 39688887
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||||| ||||||| |||    |||| || ||||||||||||||||||||||| |||||| |||||  |||||||| |||||||||||     
T  39688997 gagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctgatatgtggtcatatgaaccccgcataagtacactttc 39688898  T
Q  289 tctttcttctt 299  Q
    |||||||||||    
T  39688897 tctttcttctt 39688887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 191 - 293
Target Start/End: Original strand, 28177773 - 28177879
Alignment:
Q  191 atgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactt 286  Q
    ||||||||||||||||| | | |||||||||    ||||||||||||||||||||||||||||||||| |||| || || ||||||||||||  ||||||    
T  28177773 atgagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactt 28177872  T
Q  287 tttcttt 293  Q
    | |||||    
T  28177873 tctcttt 28177879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 42414369 - 42414298
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    ||||||||||||||||||||||||||||||||| || | ||| | ||||||||||||| ||||||| |||||    
T  42414369 tacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttatcttt 42414298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 293
Target Start/End: Complemental strand, 18520979 - 18520880
Alignment:
Q  198 atgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    |||||||||| | |||||||||||    ||||||||||||||||||||||||||||||||| || | ||  | ||||||||||||| ||||||| |||||    
T  18520979 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 18520880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 303
Target Start/End: Original strand, 26720515 - 26720630
Alignment:
Q  192 tgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacacttt 287  Q
    |||||||||||||||| | | |||||||||    |||||||||| ||||| ||| |||||||||||| ||||||| || || |||||||||| |||||||    
T  26720515 tgagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacacttt 26720614  T
Q  288 ttctttcttcttctct 303  Q
     |||||  ||||||||    
T  26720615 ctcttttctcttctct 26720630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 303
Target Start/End: Original strand, 26990264 - 26990379
Alignment:
Q  192 tgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacacttt 287  Q
    |||||||||||||||| | | |||||||||    |||||||||| ||||| ||| |||||||||||| ||||||| || || |||||||||| |||||||    
T  26990264 tgagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacacttt 26990363  T
Q  288 ttctttcttcttctct 303  Q
     |||||  ||||||||    
T  26990364 ctcttttctcttctct 26990379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 285
Target Start/End: Complemental strand, 15409710 - 15409614
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacact 285  Q
    ||||||||||||||| | | |||||||||    ||||  ||||||||||||||||||||||||||| || |||| || ||||||||||||| |||||    
T  15409710 gagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacact 15409614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 293
Target Start/End: Complemental strand, 33149740 - 33149634
Alignment:
Q  191 atgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactt 286  Q
    |||||| |||||||||| | |||||||||||    ||||||||||||||||||||||||||| ||||| || | ||  | || |||||||||| ||||||    
T  33149740 atgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactt 33149641  T
Q  287 tttcttt 293  Q
    | |||||    
T  33149640 tctcttt 33149634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 293
Target Start/End: Original strand, 40145405 - 40145511
Alignment:
Q  191 atgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactt 286  Q
    |||||| |||||||||| | |||||||||||    |||||||||| ||| |||||||||||||||||| || | ||  | ||||||||||||| ||||||    
T  40145405 atgagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 40145504  T
Q  287 tttcttt 293  Q
    | |||||    
T  40145505 tctcttt 40145511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 278
Target Start/End: Original strand, 6679731 - 6679787
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaa 278  Q
    |||||| |||||||||||||||||||||||||| |||| || || ||||||||||||    
T  6679731 tacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaa 6679787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 293
Target Start/End: Original strand, 2740307 - 2740378
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    ||||||||||||||||||||||||||||||||| || | ||  | || |||||||||| ||||||| |||||    
T  2740307 tacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 2740378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 36733009 - 36732938
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    |||||||||||||||||||||||||||||||||  | | ||  | ||||||||||||| ||||||| |||||    
T  36733009 tacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactttctcttt 36732938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 254
Target Start/End: Original strand, 35785198 - 35785264
Alignment:
Q  192 tgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgaca 254  Q
    ||||| |||||||||| | |||||||||||    |||||| ||||||||||||||||||||||||||    
T  35785198 tgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgaca 35785264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 35943992 - 35943927
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgaca 254  Q
    ||||||||||||||| | |||||||||||    |||| | ||||||||||||||||||||||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgaca 35943927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 292
Target Start/End: Original strand, 13811692 - 13811755
Alignment:
Q  229 tttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttctt 292  Q
    |||||||||||||||||||||||||| || | ||  | ||||||||||||| ||||||| ||||    
T  13811692 tttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctctt 13811755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 287
Target Start/End: Original strand, 14831812 - 14831912
Alignment:
Q  191 atgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactt 286  Q
    |||||| |||||||||| | || ||||||||    |||||||||||||||||||| |||||||||||| || | ||  | || |||||||||| ||||||    
T  14831812 atgagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 14831911  T
Q  287 t 287  Q
    |    
T  14831912 t 14831912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 248
Target Start/End: Complemental strand, 36875698 - 36875644
Alignment:
Q  198 atgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaat 248  Q
    |||||||||| | |||||||||||    |||||||||||||||||||||||||||    
T  36875698 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaat 36875644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 303
Target Start/End: Original strand, 16327906 - 16328015
Alignment:
Q  198 atgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    |||||| ||||||| |||||||||    |||| || |||||||||||| |||||||||||| |||  ||| |  ||| | |||||| |||||||||||||    
T  16327906 atgatagataaatatccttaggtggcaatacatccattgacacccacataaaaatctgacacgtgttcatgtgcacctcacacaagcacactttttcttt 16328005  T
Q  294 cttcttctct 303  Q
    | | ||||||    
T  16328006 cattttctct 16328015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 193 - 303
Target Start/End: Original strand, 22343361 - 22343475
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||||| |||||||||||    ||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||     
T  22343361 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttc 22343460  T
Q  289 tctttcttcttctct 303  Q
    |||||||||||||||    
T  22343461 tctttcttcttctct 22343475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 193 - 303
Target Start/End: Original strand, 41915741 - 41915855
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||||| |||||||||||    ||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||     
T  41915741 gagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 41915840  T
Q  289 tctttcttcttctct 303  Q
    |||||||||||||||    
T  41915841 tctttcttcttctct 41915855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 193 - 303
Target Start/End: Original strand, 38044197 - 38044311
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||||| |||||||||||    ||||||| |||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||     
T  38044197 gagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaagtacactttc 38044296  T
Q  289 tctttcttcttctct 303  Q
    |||||||||||||||    
T  38044297 tctttcttcttctct 38044311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 191 - 303
Target Start/End: Original strand, 8238210 - 8238327
Alignment:
Q  191 atgagttatgatacataaataccct-taggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacact 285  Q
    ||||||||||||||||||| ||||| ||||||    |||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||    
T  8238210 atgagttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtacact 8238309  T
Q  286 ttttctttcttcttctct 303  Q
    || |||||||||||||||    
T  8238310 ttctctttcttcttctct 8238327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 192 - 303
Target Start/End: Complemental strand, 32564527 - 32564412
Alignment:
Q  192 tgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacacttt 287  Q
    |||||||||||||||||| |  ||||||||    ||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||    
T  32564527 tgagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggctatatggaccccgcacaaatacacttt 32564428  T
Q  288 ttctttcttcttctct 303  Q
     |||||||||||||||    
T  32564427 ctctttcttcttctct 32564412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 193 - 303
Target Start/End: Original strand, 7727906 - 7728020
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||||| |||||||||||    ||||||  ||||||  |||| ||||||||||||||||| ||||| |||||||||||||||||||||     
T  7727906 gagttatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 7728005  T
Q  289 tctttcttcttctct 303  Q
    | |||||||||||||    
T  7728006 tgtttcttcttctct 7728020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 193 - 303
Target Start/End: Complemental strand, 40846213 - 40846099
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||||| | |||||||||    ||||||| |||||| |||||||||||||| |||||| |  |||| |||||||||||| ||||||||     
T  40846213 gagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaaatacactttc 40846114  T
Q  289 tctttcttcttctct 303  Q
    |||||||||||||||    
T  40846113 tctttcttcttctct 40846099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 222 - 293
Target Start/End: Original strand, 35522909 - 35522980
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    |||||| ||| |||||||||||||||||||||| |||||||||| || |||||||||| ||||||| |||||    
T  35522909 tacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttctcttt 35522980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 193 - 279
Target Start/End: Complemental strand, 46374902 - 46374812
Alignment:
Q  193 gagttatgatacataaatacccttaggtgt----acaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaag 279  Q
    ||||||||||||||| | | |||||||||     ||||||||| |||||||||||||||||||||| ||||||| || |||||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaag 46374812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 293
Target Start/End: Original strand, 38267039 - 38267144
Alignment:
Q  192 tgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacacttt 287  Q
    ||||| |||||||||| | ||||||| |||    ||||||||||||||||||||||||||||||||| || | ||  | ||||||||||||| |||||||    
T  38267039 tgagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 38267138  T
Q  288 ttcttt 293  Q
     |||||    
T  38267139 ctcttt 38267144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 293
Target Start/End: Original strand, 7389389 - 7389493
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    |||| |||||||||| | |||||||||||    ||||| ||||||||||||||||||||||||||| || | ||  | ||||||||||||| |||||||     
T  7389389 gagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 7389488  T
Q  289 tcttt 293  Q
    |||||    
T  7389489 tcttt 7389493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 292
Target Start/End: Original strand, 21234399 - 21234504
Alignment:
Q  191 atgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactt 286  Q
    ||||||||||||||||| | | |||||||||    ||||||||||||||| ||||||||||| ||||| || |||| ||  |||||||||||| ||| ||    
T  21234399 atgagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcacattt 21234498  T
Q  287 tttctt 292  Q
    | ||||    
T  21234499 tctctt 21234504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 293
Target Start/End: Complemental strand, 8080483 - 8080379
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    |||| |||||||||| | |||||||||||    |||||||||||||||| ||| |||||||||||| || | ||  | ||||||||||||| |||||||     
T  8080483 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 8080384  T
Q  289 tcttt 293  Q
    |||||    
T  8080383 tcttt 8080379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 27744375 - 27744336
Alignment:
Q  223 acaccctttgacacccacacaaaaatctgacatgtggcca 262  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  27744375 acaccctttgatacccacacaaaaatctgacatgtggcca 27744336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 293
Target Start/End: Complemental strand, 36362013 - 36361909
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    |||| |||||||||| | |||||||||||    |||| |||||||||||||||||||||||||||| || | ||  | |||||| |||||| |||||||     
T  36362013 gagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 36361914  T
Q  289 tcttt 293  Q
    |||||    
T  36361913 tcttt 36361909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 293
Target Start/End: Original strand, 36362026 - 36362130
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    |||| |||||||||| | |||||||||||    |||| |||||||||||||||||||||||||||| || | ||  | |||||| |||||| |||||||     
T  36362026 gagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 36362125  T
Q  289 tcttt 293  Q
    |||||    
T  36362126 tcttt 36362130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 293
Target Start/End: Original strand, 19329839 - 19329946
Alignment:
Q  190 catgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacact 285  Q
    ||||||| |||||||||| | | |||||||||    |||||| |||||||||||||||||||||||||| ||   ||  | ||||||||||||| |||||    
T  19329839 catgagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacact 19329938  T
Q  286 ttttcttt 293  Q
    || |||||    
T  19329939 ttctcttt 19329946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 279
Target Start/End: Original strand, 26296644 - 26296734
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaag 279  Q
    ||||||||||||||| | | |||||||||    || ||||||| ||| ||||| |||||||||| | |||||||||| |||||||||||||    
T  26296644 gagttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaag 26296734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 293
Target Start/End: Original strand, 35137531 - 35137637
Alignment:
Q  191 atgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactt 286  Q
    |||||| |||||| ||| | |||||||||||    ||||||||||||||||||||||||||||| ||| || | ||  | ||||||||||||  ||||||    
T  35137531 atgagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacactt 35137630  T
Q  287 tttcttt 293  Q
    | |||||    
T  35137631 tctcttt 35137637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 303
Target Start/End: Original strand, 36208173 - 36208287
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||| | |||||||||||    ||||  | |||||||||||||||||| ||||||||||| ||  | ||||| ||||||| ||| |||     
T  36208173 gagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacattttc 36208272  T
Q  289 tctttcttcttctct 303  Q
    |||||| ||| ||||    
T  36208273 tctttcctctcctct 36208287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 293
Target Start/End: Original strand, 3434595 - 3434666
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    |||||||||||||||||||||||||| |||||| || | ||  | || |||||||||| ||||||| |||||    
T  3434595 tacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacactttctcttt 3434666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 293
Target Start/End: Original strand, 3694400 - 3694471
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    |||||| ||| |||||||||||||||||||||| || | ||| | || |||||||||| ||||||| |||||    
T  3694400 tacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactttctcttt 3694471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 293
Target Start/End: Original strand, 38837217 - 38837321
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    |||| |||||||||| | |||||||||||    |||||||||  ||||| |||||||||||||||| || | ||  | ||||||||||||| |||||||     
T  38837217 gagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 38837316  T
Q  289 tcttt 293  Q
    |||||    
T  38837317 tcttt 38837321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 293
Target Start/End: Original strand, 3784000 - 3784099
Alignment:
Q  198 atgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    |||||||||| | |||||||||||    |||| | |||||||||||||||||||||||||| || | ||  | || |||||||||| ||||||| |||||    
T  3784000 atgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 3784099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 19436254 - 19436173
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttctttcttcttctct 303  Q
    |||||| |||||||||||||||||||||||||| || | ||  | || |||||| ||| ||||||| |||||  ||||||||    
T  19436254 tacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactttctcttttctcttctct 19436173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 43317592 - 43317547
Alignment:
Q  233 acacccacacaaaaatctgacatgtggccatatagaccccgcacaa 278  Q
    |||||||||||||| ||||||||||||| || |||||||| |||||    
T  43317592 acacccacacaaaattctgacatgtggcaatctagaccccacacaa 43317547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 46033901 - 46033831
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtgg 259  Q
    ||||||||||||||| |||  ||||||||    |||||||||| ||||||||| |||||||||||| ||||    
T  46033901 gagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtgg 46033831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 193 - 303
Target Start/End: Complemental strand, 19670816 - 19670702
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||||| |||||||||||    ||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||     
T  19670816 gagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 19670717  T
Q  289 tctttcttcttctct 303  Q
    |||||||||||||||    
T  19670716 tctttcttcttctct 19670702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 193 - 303
Target Start/End: Original strand, 55475191 - 55475305
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||||| | |||||||||    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||     
T  55475191 gagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtggccatatggaccctgcataagtacactttc 55475290  T
Q  289 tctttcttcttctct 303  Q
    |||||||||||||||    
T  55475291 tctttcttcttctct 55475305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 17983810 - 17983729
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttctttcttcttctct 303  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  17983810 tacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctct 17983729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 193 - 303
Target Start/End: Complemental strand, 29548059 - 29547945
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||||| | |||||||||    |||| || |||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||    
T  29548059 gagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgacatgtggccatatggatcccgcataagtacactttt 29547960  T
Q  289 tctttcttcttctct 303  Q
    |||||||||||||||    
T  29547959 tctttcttcttctct 29547945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 193 - 303
Target Start/End: Original strand, 47986208 - 47986322
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||||| |||||||||||    |||| || |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  47986208 gagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 47986307  T
Q  289 tctttcttcttctct 303  Q
    |||||||| ||||||    
T  47986308 tctttcttattctct 47986322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 193 - 303
Target Start/End: Complemental strand, 50813992 - 50813878
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||||| || ||||||||    ||||||| |||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||     
T  50813992 gagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacactttc 50813893  T
Q  289 tctttcttcttctct 303  Q
    |||||||||||||||    
T  50813892 tctttcttcttctct 50813878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 193 - 302
Target Start/End: Original strand, 32766958 - 32767071
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||||| || ||||||||    ||||||| |||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||     
T  32766958 gagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgacatgtggccatatggaccctgcacaagtacactttc 32767057  T
Q  289 tctttcttcttctc 302  Q
    ||||||||||||||    
T  32767058 tctttcttcttctc 32767071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 191 - 303
Target Start/End: Complemental strand, 18924597 - 18924481
Alignment:
Q  191 atgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactt 286  Q
    |||||||||||| ||||||||||||||||||    ||||||| |||| | |||||||||||||||||||||||| ||||  || ||||||||||||||||    
T  18924597 atgagttatgatccataaatacccttaggtggcaatacaccccttgatatccacacaaaaatctgacatgtggcaatatgaactccgcacaagtacactt 18924498  T
Q  287 tttctttcttcttctct 303  Q
    | |||||||||||||||    
T  18924497 tctctttcttcttctct 18924481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 201 - 303
Target Start/End: Complemental strand, 29589831 - 29589726
Alignment:
Q  201 atacataaatacccttaggtg---tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttctttcttc 297  Q
    ||||||||| |||||||| ||   ||||||| ||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||| |||||||||    
T  29589831 atacataaacacccttagttgcaatacaccccttgacacccacacaaaaatctgatatgtggccatatggaccccacacaagtacactttctctttcttc 29589732  T
Q  298 ttctct 303  Q
    ||||||    
T  29589731 ttctct 29589726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 193 - 303
Target Start/End: Complemental strand, 55079814 - 55079699
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatataga-ccccgcacaagtacacttt 287  Q
    ||||||||||||||||| |||||||||||    ||||||  |||||||||| ||||||||||||||||||||||||| || |||| ||||||||||||||    
T  55079814 gagttatgatacataaacacccttaggtggcaatacacctcttgacacccatacaaaaatctgacatgtggccatatggacccccacacaagtacacttt 55079715  T
Q  288 ttctttcttcttctct 303  Q
     |||||||||||||||    
T  55079714 ctctttcttcttctct 55079699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 193 - 303
Target Start/End: Complemental strand, 8343263 - 8343149
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||||| | |||||||||    |||| ||||||||||| ||| ||||||||||||||||||||||| ||||||||| ||||| |||||     
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgacatgtggccatatggaccccgcataagtatactttc 8343164  T
Q  289 tctttcttcttctct 303  Q
    |||||||||||||||    
T  8343163 tctttcttcttctct 8343149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 193 - 303
Target Start/End: Complemental strand, 44536845 - 44536732
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||||| ||  |||||||    ||||||||| |||| ||||||||||||||||||||||| |||||||||||| || |||||||||||     
T  44536845 gagttatgatacataaacacttttaggtggcaatacaccctt-gacatccacacaaaaatctgacatgtggtcatatagaccccacataagtacactttc 44536747  T
Q  289 tctttcttcttctct 303  Q
    |||||||||||||||    
T  44536746 tctttcttcttctct 44536732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 293
Target Start/End: Original strand, 6034043 - 6034148
Alignment:
Q  192 tgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacacttt 287  Q
    ||||| |||||||||| | |||||||||||    |||||||||||||||||||||||||||||||||||| | ||  | || |||||||||| |||||||    
T  6034043 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacacttt 6034142  T
Q  288 ttcttt 293  Q
     |||||    
T  6034143 ctcttt 6034148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 293
Target Start/End: Original strand, 31910191 - 31910296
Alignment:
Q  192 tgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacacttt 287  Q
    |||||||||||||||| | | |||||||||    ||||| |||||||||||||||||||||||||||  | |||| || ||||||||||||| |||||||    
T  31910191 tgagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacacttt 31910290  T
Q  288 ttcttt 293  Q
     |||||    
T  31910291 ctcttt 31910296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 303
Target Start/End: Complemental strand, 11511563 - 11511448
Alignment:
Q  192 tgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacacttt 287  Q
    ||||| |||||||||| | |||||||||||    |||||||||||||||||||| |||||||||||| || | ||  | ||||||||||||| |||||||    
T  11511563 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 11511464  T
Q  288 ttctttcttcttctct 303  Q
     |||||  ||||||||    
T  11511463 ctcttttctcttctct 11511448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 29977918 - 29977999
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttctttcttcttctct 303  Q
    ||||||| || |||||||||||||||||||||| || | ||||| |||||| |||||| ||||||| |||||| ||||||||    
T  29977918 tacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacactttctctttcatcttctct 29977999  T

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Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 50052495 - 50052414
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttctttcttcttctct 303  Q
    ||||||||||||||||||||||||||||||||| || | ||  | ||||||||||||| ||||||| |||||| ||| ||||    
T  50052495 tacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctctttcctctcctct 50052414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 293
Target Start/End: Complemental strand, 480547 - 480443
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    |||| |||||||||| | |||||||||||    ||||||||||||||||||||||||||||||||| || | ||  | ||||||| ||||| |||||||     
T  480547 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 480448  T
Q  289 tcttt 293  Q
    |||||    
T  480447 tcttt 480443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 48183116 - 48183045
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    ||||||||||||||||||||||||||||||||| || | ||  | ||||||||||||| ||||||| |||||    
T  48183116 tacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 48183045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 254
Target Start/End: Original strand, 40574777 - 40574844
Alignment:
Q  191 atgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgaca 254  Q
    ||||||||||||||||| | | |||||||||    |||||||||||||||||||||||||||||||||    
T  40574777 atgagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgaca 40574844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 293
Target Start/End: Complemental strand, 54473634 - 54473529
Alignment:
Q  192 tgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacacttt 287  Q
    ||||| |||||||||| | |||||||||||    |||||| |||||||||||||||||||||| ||| || | ||  | ||||||||||||| |||||||    
T  54473634 tgagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttt 54473535  T
Q  288 ttcttt 293  Q
     |||||    
T  54473534 atcttt 54473529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 293
Target Start/End: Original strand, 41236347 - 41236451
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    |||| |||||||||| | |||||||||||    |||||| ||||||| |||||||||||||||||| || | ||  | ||||||||||||| |||||||     
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 41236446  T
Q  289 tcttt 293  Q
    |||||    
T  41236447 tcttt 41236451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 41823920 - 41823986
Alignment:
Q  227 cctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    ||||| |||||||||||||||||||||| || | || || ||||||||||||| ||||||| |||||    
T  41823920 cctttaacacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcacactttctcttt 41823986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 50526238 - 50526201
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtgg 259  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  50526238 tacaccctttgacacccacacaaaaatctgacacgtgg 50526201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 294
Target Start/End: Original strand, 18769142 - 18769214
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttctttc 294  Q
    |||||||| | |||||||||||||||||||||| |||| ||| || ||||| ||||| |||| ||| ||||||    
T  18769142 tacaccctctaacacccacacaaaaatctgacacgtggtcatgtaaaccccacacaaatacattttctctttc 18769214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 293
Target Start/End: Complemental strand, 42044467 - 42044363
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    |||| |||||||||| | |||||||||||    |||| ||||  |||||||||||||||||||||| || | ||  | ||||||||||||| |||||||     
T  42044467 gagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 42044368  T
Q  289 tcttt 293  Q
    |||||    
T  42044367 tcttt 42044363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 254
Target Start/End: Original strand, 3481652 - 3481719
Alignment:
Q  191 atgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgaca 254  Q
    |||||| |||||||||| | ||| |||||||    ||||| |||||||||||||||||||||||||||    
T  3481652 atgagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgaca 3481719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 303
Target Start/End: Complemental strand, 56300225 - 56300151
Alignment:
Q  229 tttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttctttcttcttctct 303  Q
    ||||||| ||||||||||||||||||||||| |||||  | || ||||||  ||||||| |||||| ||| ||||    
T  56300225 tttgacatccacacaaaaatctgacatgtggtcatatgaatcctgcacaaacacactttctctttcctctcctct 56300151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 303
Target Start/End: Original strand, 29239886 - 29240000
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    |||| |||||||||| | |||||||||||    |||||| ||||||| |||||||||||||| ||| || | ||  | |||||| |||||| |||||||     
T  29239886 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacactttc 29239985  T
Q  289 tctttcttcttctct 303  Q
    |||||| ||| ||||    
T  29239986 tctttcctctcctct 29240000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 23608268 - 23608300
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgaca 254  Q
    |||||| ||||||||||||||||||||||||||    
T  23608268 tacaccatttgacacccacacaaaaatctgaca 23608300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 224 - 303
Target Start/End: Complemental strand, 36331394 - 36331315
Alignment:
Q  224 caccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttctttcttcttctct 303  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  36331394 caccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctct 36331315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 192 - 303
Target Start/End: Complemental strand, 45058653 - 45058539
Alignment:
Q  192 tgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacacttt 287  Q
    |||||||||||||||||| |||||||||||    ||||||||| |||||||||| |||||||||||||||| |||||| ||||||||||||||| |||||    
T  45058653 tgagttatgatacataaacacccttaggtggcaatacaccctt-gacacccacataaaaatctgacatgtgaccatatggaccccgcacaagtatacttt 45058555  T
Q  288 ttctttcttcttctct 303  Q
     |||||||||||||||    
T  45058554 ctctttcttcttctct 45058539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 51419427 - 51419356
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    |||| ||||| |||||||||||||||||||||| ||||||| |||||||||||||||| ||||||| |||||    
T  51419427 tacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacactttctcttt 51419356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 196 - 303
Target Start/End: Original strand, 42823114 - 42823225
Alignment:
Q  196 ttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttct 291  Q
    |||||||||||||| ||| ||| |||    ||||||| |||||||||||| |||||| |||||||||| ||||| ||||||||| ||||| ||||| |||    
T  42823114 ttatgatacataaacaccattatgtggtaatacaccccttgacacccacaaaaaaatttgacatgtggtcatatggaccccgcataagtatactttctct 42823213  T
Q  292 ttcttcttctct 303  Q
    ||||| ||||||    
T  42823214 ttcttattctct 42823225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 193 - 303
Target Start/End: Original strand, 8076393 - 8076507
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    |||| |||||||||||| |||||||||||    ||||||||||||||||||||||||||||| ||| || | ||  | ||||||||||||| |||||||     
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 8076492  T
Q  289 tctttcttcttctct 303  Q
    |||||| ||| ||||    
T  8076493 tctttcctctcctct 8076507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 293
Target Start/End: Complemental strand, 26141634 - 26141528
Alignment:
Q  191 atgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactt 286  Q
    ||||||||||||||||| | | |||||||||    |||||||||| |||||||||||||||||||||| |||| || || |||||| |||||| ||||||    
T  26141634 atgagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacactt 26141535  T
Q  287 tttcttt 293  Q
    | |||||    
T  26141534 tctcttt 26141528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 293
Target Start/End: Original strand, 53982009 - 53982115
Alignment:
Q  191 atgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactt 286  Q
    |||||| |||||||||| | |||||||||||    ||||||||||||||||||||||||||||||||| || | ||  | ||||||||||||| ||||||    
T  53982009 atgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 53982108  T
Q  287 tttcttt 293  Q
    | |||||    
T  53982109 tctcttt 53982115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 222 - 293
Target Start/End: Original strand, 31456722 - 31456793
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    ||||||||||||||||||||||||||||||||| || | ||| | ||||||||||||| ||||||| |||||    
T  31456722 tacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctcttt 31456793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 303
Target Start/End: Original strand, 26754698 - 26754809
Alignment:
Q  196 ttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttct 291  Q
    ||||||| |||| | |||||||||||    ||||||||| |||| ||||||||||||||||||||||| || || ||||||||||||| ||| ||| |||    
T  26754698 ttatgattcatagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctct 26754797  T
Q  292 ttcttcttctct 303  Q
    ||| ||| ||||    
T  26754798 ttcctctcctct 26754809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 27714958 - 27714888
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttctt 292  Q
    ||||||||||||||||||||||||||||||||| || | ||| | ||||||||||||| ||||||| ||||    
T  27714958 tacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctctt 27714888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 293
Target Start/End: Complemental strand, 20765016 - 20764911
Alignment:
Q  192 tgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacacttt 287  Q
    |||||||||| ||||| | | |||||||||    ||||| |||| |||||||||||||||||||||| ||||||| || ||||||| ||||| |||||||    
T  20765016 tgagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacacttt 20764917  T
Q  288 ttcttt 293  Q
     |||||    
T  20764916 ctcttt 20764911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 303
Target Start/End: Complemental strand, 25395387 - 25395319
Alignment:
Q  235 acccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttctttcttcttctct 303  Q
    |||||||||||||||||||||||||| ||||||||||| |||||  ||| ||| |||||| ||||||||    
T  25395387 acccacacaaaaatctgacatgtggctatatagaccccacacaaacacattttctctttcatcttctct 25395319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 293
Target Start/End: Original strand, 33644199 - 33644304
Alignment:
Q  192 tgagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacacttt 287  Q
    ||||| |||||||||| | |||||| ||||    ||||||||||||||||||||||||||||||||| || | ||  | ||||||||||||| |||||||    
T  33644199 tgagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 33644298  T
Q  288 ttcttt 293  Q
     |||||    
T  33644299 ctcttt 33644304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 293
Target Start/End: Complemental strand, 11348022 - 11347918
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||| | | |||||||||    |||| ||||||||| |||||||||||||||||| ||||||| || ||||| ||| ||| |||||||     
T  11348022 gagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcacactttc 11347923  T
Q  289 tcttt 293  Q
    |||||    
T  11347922 tcttt 11347918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 293
Target Start/End: Original strand, 11907371 - 11907475
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||| | |||||||||||    ||||| | |  |||| |||||||||||||||||||||| ||||| ||||||||||||| ||| |||     
T  11907371 gagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcacattttc 11907470  T
Q  289 tcttt 293  Q
    |||||    
T  11907471 tcttt 11907475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 294
Target Start/End: Complemental strand, 30801828 - 30801728
Alignment:
Q  198 atgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    |||||||||| | |||||||||||    |||||||||||| |||||||||||||| |||||||| | ||||| |||||| |||||| ||| ||| |||||    
T  30801828 atgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcacattttctcttt 30801729  T
Q  294 c 294  Q
    |    
T  30801728 c 30801728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 293
Target Start/End: Complemental strand, 41189864 - 41189760
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttt 288  Q
    ||||||||||||||| | | |||||||||    |||| | ||||||||||||| |||||| ||||| ||||||| || ||||||||||||| |||||||     
T  41189864 gagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacactttc 41189765  T
Q  289 tcttt 293  Q
    |||||    
T  41189764 tcttt 41189760  T

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Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 293
Target Start/End: Original strand, 52629304 - 52629404
Alignment:
Q  197 tatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttctt 292  Q
    ||||||||||| | |||||||||||    ||||||||||||||||||||||||||||||||| || | ||  | ||||||| ||||| ||||||| ||||    
T  52629304 tatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctctt 52629403  T
Q  293 t 293  Q
    |    
T  52629404 t 52629404  T

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Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 198 - 293
Target Start/End: Complemental strand, 48587186 - 48587087
Alignment:
Q  198 atgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    |||||||||| |||||||||||||    |||||||||||||||| ||| |||||||||||| || | ||  | || |||||||||||||||||| |||||    
T  48587186 atgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctcttt 48587087  T

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Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 14623906 - 14623825
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttctttcttcttctct 303  Q
    ||||||| |||||||||||| ||||||||||||||||  ||| | |||| | |||||| ||||||| |||||| ||||||||    
T  14623906 tacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacactttctctttcatcttctct 14623825  T

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Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 11095453 - 11095388
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgaca 254  Q
    |||| |||||||||| | |||||||||||    |||||||||||||||||||||||||||||||||    
T  11095453 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 11095388  T

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Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 33118951 - 33118886
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgaca 254  Q
    ||||||||||||||| | |||||||||||    ||||||||||||||||||||||||||| |||||    
T  33118951 gagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgaca 33118886  T

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Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 36707524 - 36707459
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgaca 254  Q
    |||| |||||||||| |||||||||||||    |||||||||||||| ||||||||||||||||||    
T  36707524 gagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgaca 36707459  T

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Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 49607414 - 49607479
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgaca 254  Q
    |||| |||||||||| | |||||||||||    |||||||||||||||||||||||||||||||||    
T  49607414 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 49607479  T

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Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 293
Target Start/End: Original strand, 47531898 - 47531969
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttcttt 293  Q
    |||||| ||| ||| |||||||| ||||||||| ||||||||||  |||||||||||| ||||||| |||||    
T  47531898 tacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttctcttt 47531969  T

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Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 13898122 - 13898041
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttctttcttcttctct 303  Q
    ||||||| |||||||||||| |||||||||||| |||  ||| | |||| | |||||| ||||||| |||||| ||||||||    
T  13898122 tacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttctctttcatcttctct 13898041  T

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Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 54868995 - 54868930
Alignment:
Q  193 gagttatgatacataaatacccttaggtg----tacaccctttgacacccacacaaaaatctgaca 254  Q
    |||| |||||||||| | |||||||||||    |||||| ||||||||||||||||||||||||||    
T  54868995 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgaca 54868930  T

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Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 259
Target Start/End: Original strand, 41080742 - 41080778
Alignment:
Q  223 acaccctttgacacccacacaaaaatctgacatgtgg 259  Q
    |||||||||||||||||| ||||||||||| ||||||    
T  41080742 acaccctttgacacccacgcaaaaatctgatatgtgg 41080778  T

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Target: scaffold0018 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 152531 - 152612
Alignment:
Q  222 tacaccctttgacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttctttcttcttctct 303  Q
    ||||||| |||||||||||||||||||||||||||||| ||||| || ||||||||| |||||||| |||||||||||||||    
T  152531 tacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctctttcttcttctct 152612  T

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Target: scaffold0316 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 232 - 305
Target Start/End: Original strand, 17097 - 17170
Alignment:
Q  232 gacacccacacaaaaatctgacatgtggccatatagaccccgcacaagtacactttttctttcttcttctctct 305  Q
    |||| ||||||||||||||||||||||| || || ||||||||||||| ||| ||| |||||| ||||||||||    
T  17097 gacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctctttcctcttctctct 17170  T

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