View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7203_low_11 (Length: 276)
Name: NF7203_low_11
Description: NF7203
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7203_low_11 |
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Alignment Details
Target: chr2 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 9687755 - 9688024
Alignment:
| Q |
1 |
tttgattttcagtgcgacaagttctaataaagcaataaataacttatatgtatgtgtcaaatatttagaaatgaagtagaggtgatgaactcacgagggt |
100 |
Q |
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| T |
9687755 |
tttgattttcagtgccacaagttctaataaagcaataaataacttatatgtatgtgtcaaatatttagaaatgaagtagaggtgatgaactcacgagggt |
9687854 |
T |
|
| Q |
101 |
acttgttgagaagcttcctaaccttcttgtagcatttctcacactcaagatcaaccttgagcctcataatggtcacctgaataaaaatcaccaattaaaa |
200 |
Q |
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| T |
9687855 |
acttgttgagaagcttcctaaccttcttgtagcatttctcacactcaagatcaaccttgagcctcataatggtcacctgaataaaaatcaccaattaaaa |
9687954 |
T |
|
| Q |
201 |
ttatacataggaccatgatgaaacaaatttatgatattaataaaagaatggcatactatatctatgatac |
270 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
9687955 |
ttatacataggaccatggtgaaacaaatttatgatattaataaaagaatggcatattatatctatgatac |
9688024 |
T |
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