View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7203_low_15 (Length: 229)
Name: NF7203_low_15
Description: NF7203
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7203_low_15 |
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Alignment Details
Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 41800399 - 41800623
Alignment:
| Q |
1 |
cgcgtcaacacattcaccctctcttcgactttacctgtaattttcatatctttcttttcaaatctttatatttttctaaactgttacttcaaaatcttgt |
100 |
Q |
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| T |
41800399 |
cgcgtcaacacattcaccctctcttcgactttacctgtaattttcatatctttcttttcaaatctttatatttttctaaactgttacttcaaaatcttgt |
41800498 |
T |
|
| Q |
101 |
aattttcttgcagaagatagaattaagagctggaaattcatggagcccgagcctgagtgttaactcgcaggtataaatataatagctttgaaagttgttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
41800499 |
aattttcttgcagaagatagaattaagagctggaaattcatggagcccgagcctgagtgttaactcgcaggtataaatataataactttgaaagttgttg |
41800598 |
T |
|
| Q |
201 |
aattctttgtttgcaacacgaaact |
225 |
Q |
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|||||||||||||||||| |||||| |
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| T |
41800599 |
aattctttgtttgcaacatgaaact |
41800623 |
T |
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