View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7203_low_2 (Length: 445)

Name: NF7203_low_2
Description: NF7203
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7203_low_2
NF7203_low_2
[»] chr7 (47 HSPs)
chr7 (1-426)||(6584757-6585176)
chr7 (127-302)||(34389926-34390099)
chr7 (127-301)||(41089693-41089865)
chr7 (127-302)||(35745770-35745944)
chr7 (127-290)||(33435073-33435234)
chr7 (127-287)||(47325845-47326002)
chr7 (127-278)||(3419624-3419773)
chr7 (127-278)||(25160779-25160925)
chr7 (127-287)||(38306225-38306382)
chr7 (127-301)||(3867080-3867252)
chr7 (127-287)||(10244146-10244303)
chr7 (131-287)||(37794957-37795110)
chr7 (127-301)||(8745117-8745287)
chr7 (134-287)||(5860248-5860398)
chr7 (59-124)||(34389718-34389783)
chr7 (14-127)||(42533509-42533625)
chr7 (10-127)||(47326141-47326261)
chr7 (127-223)||(16954617-16954713)
chr7 (127-207)||(42533289-42533369)
chr7 (185-287)||(44353524-44353623)
chr7 (127-201)||(44755591-44755664)
chr7 (380-435)||(34391427-34391482)
chr7 (139-225)||(3478328-3478414)
chr7 (127-225)||(6716755-6716853)
chr7 (127-200)||(1320758-1320831)
chr7 (127-216)||(38485520-38485609)
chr7 (127-223)||(16828957-16829053)
chr7 (127-280)||(46133244-46133395)
chr7 (14-127)||(3419912-3420029)
chr7 (23-101)||(9106886-9106964)
chr7 (131-225)||(24324817-24324911)
chr7 (301-435)||(35745601-35745740)
chr7 (127-225)||(47457041-47457139)
chr7 (1-123)||(16954350-16954474)
chr7 (16-127)||(3478063-3478178)
chr7 (10-129)||(8744858-8744980)
chr7 (127-224)||(13311803-13311900)
chr7 (56-91)||(6717024-6717059)
chr7 (14-53)||(25160525-25160564)
chr7 (259-293)||(36449176-36449210)
chr7 (251-293)||(48161978-48162020)
chr7 (174-207)||(25153231-25153264)
chr7 (174-207)||(27993573-27993606)
chr7 (14-123)||(33434817-33434931)
chr7 (14-127)||(37794710-37794826)
chr7 (171-207)||(9349757-9349793)
chr7 (246-286)||(23983286-23983326)
[»] chr1 (42 HSPs)
chr1 (127-302)||(27031784-27031957)
chr1 (127-288)||(46814425-46814584)
chr1 (127-293)||(24658893-24659057)
chr1 (127-298)||(7857617-7857786)
chr1 (127-293)||(24684431-24684595)
chr1 (127-287)||(24449890-24450047)
chr1 (127-287)||(30685864-30686021)
chr1 (127-287)||(46692779-46692936)
chr1 (127-287)||(41920417-41920573)
chr1 (127-287)||(5389381-5389538)
chr1 (127-287)||(31585720-31585877)
chr1 (135-287)||(5459133-5459282)
chr1 (299-435)||(46814246-46814387)
chr1 (299-435)||(7857814-7857954)
chr1 (127-225)||(9313308-9313406)
chr1 (146-207)||(6583253-6583314)
chr1 (14-129)||(30686158-30686276)
chr1 (127-216)||(4651744-4651833)
chr1 (1-77)||(16147264-16147341)
chr1 (1-101)||(46814750-46814851)
chr1 (148-224)||(17033571-17033647)
chr1 (139-199)||(34774847-34774907)
chr1 (14-91)||(7857360-7857439)
chr1 (14-127)||(31586016-31586133)
chr1 (8-78)||(52278208-52278279)
chr1 (377-435)||(27031620-27031677)
chr1 (127-200)||(20113565-20113638)
chr1 (127-223)||(19598600-19598696)
chr1 (328-435)||(24659123-24659230)
chr1 (139-207)||(40933839-40933907)
chr1 (32-128)||(10785582-10785681)
chr1 (162-208)||(27905411-27905457)
chr1 (127-293)||(27102154-27102317)
chr1 (131-216)||(42374131-42374216)
chr1 (18-101)||(27032147-27032231)
chr1 (38-101)||(38545017-38545080)
chr1 (62-92)||(27102059-27102089)
chr1 (154-224)||(38544758-38544828)
chr1 (10-100)||(24450214-24450308)
chr1 (146-207)||(32864598-32864659)
chr1 (16-53)||(41920191-41920228)
chr1 (57-101)||(24658681-24658725)
[»] chr3 (38 HSPs)
chr3 (127-293)||(23328303-23328467)
chr3 (143-302)||(45398776-45398933)
chr3 (127-302)||(40023516-40023688)
chr3 (127-301)||(19176467-19176638)
chr3 (128-287)||(2392466-2392622)
chr3 (127-290)||(9584009-9584170)
chr3 (127-287)||(34475714-34475871)
chr3 (127-287)||(20611747-20611904)
chr3 (162-293)||(43012374-43012503)
chr3 (134-278)||(45163824-45163967)
chr3 (21-124)||(40023829-40023932)
chr3 (128-206)||(2394291-2394369)
chr3 (131-206)||(14193908-14193983)
chr3 (10-127)||(47235420-47235541)
chr3 (9-126)||(25647386-25647507)
chr3 (330-435)||(45398993-45399099)
chr3 (299-433)||(23328131-23328270)
chr3 (373-435)||(40023350-40023412)
chr3 (233-298)||(21342603-21342668)
chr3 (9-127)||(14193641-14193763)
chr3 (174-287)||(17550968-17551078)
chr3 (14-127)||(20611492-20611608)
chr3 (127-207)||(25647648-25647728)
chr3 (149-207)||(14879421-14879479)
chr3 (21-129)||(37123106-37123218)
chr3 (147-287)||(31482868-31483005)
chr3 (21-91)||(1653176-1653246)
chr3 (127-224)||(14755285-14755380)
chr3 (127-200)||(30935434-30935507)
chr3 (14-100)||(34476037-34476125)
chr3 (127-224)||(37123346-37123443)
chr3 (173-224)||(33143969-33144020)
chr3 (127-225)||(47945669-47945768)
chr3 (159-279)||(1652855-1652971)
chr3 (11-53)||(45163554-45163596)
chr3 (133-167)||(47235686-47235720)
chr3 (194-287)||(47235729-47235819)
chr3 (394-431)||(50305359-50305396)
[»] chr8 (28 HSPs)
chr8 (127-293)||(15821332-15821496)
chr8 (131-301)||(36630805-36630973)
chr8 (127-287)||(34388965-34389122)
chr8 (127-287)||(32066255-32066412)
chr8 (127-280)||(9519463-9519613)
chr8 (127-287)||(37986818-37986975)
chr8 (127-287)||(24995355-24995512)
chr8 (127-287)||(31207322-31207478)
chr8 (228-302)||(38577734-38577808)
chr8 (374-435)||(38577567-38577628)
chr8 (185-287)||(20138448-20138547)
chr8 (127-225)||(10248572-10248670)
chr8 (142-275)||(16457433-16457562)
chr8 (127-224)||(30236148-30236245)
chr8 (332-434)||(35816026-35816128)
chr8 (251-302)||(35816187-35816238)
chr8 (299-435)||(15821157-15821299)
chr8 (127-200)||(10552233-10552305)
chr8 (14-91)||(10248845-10248924)
chr8 (159-216)||(35062453-35062510)
chr8 (140-216)||(12898302-12898378)
chr8 (33-101)||(18690160-18690228)
chr8 (146-225)||(17657021-17657100)
chr8 (14-53)||(34389311-34389350)
chr8 (163-224)||(15906686-15906747)
chr8 (41-92)||(17657297-17657350)
chr8 (32-101)||(30236377-30236446)
chr8 (12-127)||(37987114-37987233)
[»] chr2 (38 HSPs)
chr2 (127-293)||(7874255-7874419)
chr2 (127-299)||(14405163-14405332)
chr2 (131-287)||(39338825-39338978)
chr2 (142-293)||(14106475-14106626)
chr2 (167-302)||(5254260-5254393)
chr2 (141-302)||(387151-387311)
chr2 (299-431)||(14106305-14106442)
chr2 (299-431)||(7460837-7460974)
chr2 (299-435)||(5254417-5254553)
chr2 (1-127)||(17105107-17105236)
chr2 (299-428)||(7874452-7874585)
chr2 (127-207)||(10524061-10524141)
chr2 (146-225)||(1269466-1269545)
chr2 (127-200)||(37770685-37770758)
chr2 (14-127)||(39339121-39339237)
chr2 (127-293)||(10173532-10173695)
chr2 (131-221)||(17105379-17105470)
chr2 (32-101)||(22885412-22885481)
chr2 (170-225)||(16959989-16960044)
chr2 (147-293)||(22885088-22885229)
chr2 (146-207)||(9560825-9560886)
chr2 (127-208)||(41086824-41086904)
chr2 (1-129)||(41087040-41087172)
chr2 (175-293)||(2062901-2063015)
chr2 (33-101)||(15710437-15710505)
chr2 (33-101)||(15722900-15722968)
chr2 (171-293)||(34230209-34230327)
chr2 (146-208)||(8520385-8520447)
chr2 (259-293)||(16952337-16952371)
chr2 (259-293)||(17023002-17023036)
chr2 (259-293)||(17060308-17060342)
chr2 (21-83)||(25505196-25505258)
chr2 (32-91)||(1269209-1269270)
chr2 (127-216)||(27739939-27740028)
chr2 (27-127)||(10523819-10523922)
chr2 (32-75)||(16952681-16952725)
chr2 (32-75)||(17023346-17023390)
chr2 (32-75)||(17060652-17060696)
[»] chr4 (29 HSPs)
chr4 (134-302)||(31050605-31050772)
chr4 (127-287)||(8254991-8255148)
chr4 (127-287)||(8268409-8268566)
chr4 (127-302)||(2825747-2825920)
chr4 (127-225)||(53823440-53823538)
chr4 (127-287)||(30964405-30964562)
chr4 (211-302)||(35341282-35341371)
chr4 (127-269)||(4305689-4305828)
chr4 (137-225)||(19815243-19815331)
chr4 (127-278)||(25753136-25753283)
chr4 (127-225)||(38929791-38929889)
chr4 (160-222)||(49747524-49747586)
chr4 (10-127)||(8254732-8254852)
chr4 (10-127)||(8268150-8268270)
chr4 (15-127)||(19672812-19672927)
chr4 (1-127)||(31050917-31051046)
chr4 (127-224)||(2061758-2061855)
chr4 (14-127)||(30964150-30964266)
chr4 (139-225)||(19673077-19673162)
chr4 (127-225)||(22811179-22811276)
chr4 (150-207)||(35800476-35800533)
chr4 (127-207)||(21387241-21387321)
chr4 (14-123)||(4305434-4305546)
chr4 (300-435)||(31050440-31050580)
chr4 (42-127)||(22811416-22811504)
chr4 (134-205)||(19311381-19311451)
chr4 (146-216)||(36962643-36962713)
chr4 (174-216)||(39041302-39041344)
chr4 (146-207)||(39421050-39421111)
[»] chr5 (25 HSPs)
chr5 (127-287)||(29087445-29087603)
chr5 (127-287)||(34378062-34378219)
chr5 (127-287)||(698325-698482)
chr5 (127-226)||(7392049-7392148)
chr5 (127-278)||(18593207-18593355)
chr5 (127-224)||(33258902-33258999)
chr5 (127-301)||(14302377-14302547)
chr5 (127-207)||(13954271-13954350)
chr5 (21-101)||(24072546-24072626)
chr5 (127-225)||(7195258-7195355)
chr5 (14-101)||(29087257-29087346)
chr5 (230-293)||(7162270-7162333)
chr5 (14-101)||(7195523-7195613)
chr5 (127-225)||(8297432-8297530)
chr5 (127-224)||(24072286-24072383)
chr5 (127-216)||(31721641-31721730)
chr5 (166-225)||(22675343-22675402)
chr5 (32-91)||(13954525-13954586)
chr5 (129-222)||(25991973-25992066)
chr5 (163-207)||(26046001-26046045)
chr5 (21-83)||(8730649-8730711)
chr5 (146-216)||(28765630-28765700)
chr5 (1-92)||(26046256-26046349)
chr5 (174-206)||(25341709-25341741)
chr5 (32-83)||(27712819-27712871)
[»] scaffold0068 (1 HSPs)
scaffold0068 (127-278)||(35741-35888)
[»] chr6 (16 HSPs)
chr6 (127-222)||(16510323-16510418)
chr6 (127-287)||(3117457-3117614)
chr6 (127-293)||(20701758-20701920)
chr6 (16-127)||(16510549-16510663)
chr6 (127-200)||(3880627-3880700)
chr6 (8-101)||(20702086-20702182)
chr6 (9-101)||(12793824-12793916)
chr6 (127-182)||(15132585-15132640)
chr6 (139-221)||(32935362-32935444)
chr6 (147-221)||(12794098-12794173)
chr6 (150-221)||(26216042-26216112)
chr6 (150-206)||(26534757-26534813)
chr6 (179-225)||(13423482-13423528)
chr6 (174-207)||(7546466-7546499)
chr6 (131-224)||(9224010-9224102)
chr6 (160-216)||(34105410-34105466)
[»] scaffold0200 (1 HSPs)
scaffold0200 (146-293)||(19366-19509)
[»] scaffold0050 (1 HSPs)
scaffold0050 (127-223)||(36671-36767)
[»] scaffold0119 (2 HSPs)
scaffold0119 (146-225)||(42157-42236)
scaffold0119 (32-91)||(42432-42493)
[»] scaffold0063 (2 HSPs)
scaffold0063 (56-91)||(57946-57981)
scaffold0063 (150-200)||(58114-58164)
[»] scaffold0062 (4 HSPs)
scaffold0062 (33-77)||(46822-46866)
scaffold0062 (127-207)||(47057-47137)
scaffold0062 (33-101)||(59349-59417)
scaffold0062 (33-101)||(71457-71525)
[»] scaffold1613 (2 HSPs)
scaffold1613 (38-101)||(1296-1359)
scaffold1613 (154-224)||(1037-1107)
[»] scaffold0343 (1 HSPs)
scaffold0343 (232-278)||(5772-5818)


Alignment Details
Target: chr7 (Bit Score: 267; Significance: 1e-149; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 426
Target Start/End: Original strand, 6584757 - 6585176
Alignment:
Q  1 tggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt-catttttgggttgttaaggtgtttagggtgtttggaggatgcgtgt 99  Q
    |||||| ||||| | ||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||         ||||| |||||      
T  6584757 tggagatagcctctattacacgggtccatgatcgtcgtcgctagctcttgtttgcatttatgggttgttaaggtgttt---------ggagggtgcgt-- 6584845  T
Q  100 ccgttgcgatgagccttttccttttgatctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgat 199  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  6584846 ccgttgcgatgagccttttccttttgatctatggtgtaccggaggcgaggggtgccctgctgatttggttctaaagtctggtgggccgatcacttttgat 6584945  T
Q  200 ttgagatcaagagtcagctctttggcaattaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgca 299  Q
    | ||||||  ||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6584946 tcgagatcgggagtcagctctttggc--ttaagttggtttttgggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgca 6585043  T
Q  300 tgtggctcagcttgggtgttgaagtatg-----tttattttgagggttgctctttggaggtaagtagcgacgatgagt-gttgtggatactgtgttttca 393  Q
    ||||||||||||||||||||||||| ||     ||||||||||||| |||| ||||||||| ||||| |||||||||| |||||||||||||||||||||    
T  6585044 tgtggctcagcttgggtgttgaagtctgggagttttattttgaggggtgctatttggaggtgagtagtgacgatgagtggttgtggatactgtgttttca 6585143  T
Q  394 gtgttttgtttctattaaggtgtccgtcttagg 426  Q
    ||||||||||||| |||||||||||||||||||    
T  6585144 gtgttttgtttctgttaaggtgtccgtcttagg 6585176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 127 - 302
Target Start/End: Original strand, 34389926 - 34390099
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    |||||||||||| ||||| |||| ||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||  ||||||||||||||||     
T  34389926 tctctggtgtactgggggtgaggagtgccctgctgatttggttttaaagtctggtgggccgatcacttttgattcgagatcgggagtcagctctttggc- 34390024  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatgt 302  Q
     |||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  34390025 -ttaagttggtttttgggcttttattttgtgctctttcggtggatcggaggtcgagaggttgtggaagctgcatgt 34390099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 127 - 301
Target Start/End: Complemental strand, 41089865 - 41089693
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    ||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||| |||||   ||||||||||||||  |    
T  41089865 tctctggtgtatcgggggcgaggggtgctctgctaatttggtactaaagtctggtggaccgatcacttttgattcgagattgggagtcagctctttg--a 41089768  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatg 301  Q
     | ||||||||||||  |||||||||||||| |||||||||||||||||||| | |||||||||||| |||||||    
T  41089767 ctcaagttggtttttgagcttttgttttgtgatctttcggtggatcggaggtcgcgaggttgtggaagctgcatg 41089693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 127 - 302
Target Start/End: Complemental strand, 35745944 - 35745770
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    |||||| |||||||||||||||||||||||| || |||| ||||||||||||| ||| | |||||||||||||| ||||||   ||||| |||||||||     
T  35745944 tctctgatgtaccgggggcgaggggtgccctactaattttgttctaaagtctgatgggctgatcacttttgattcgagatcggaagtcatctctttggc- 35745846  T
Q  227 attaagttggttttttggcttttg-ttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatgt 302  Q
     | |||||||||||| |||||||| ||||||||||||||||||||| |||||| |||||||||||||| ||||||||    
T  35745845 -tcaagttggtttttgggcttttgtttttgtgctctttcggtggattggaggtggagaggttgtggaagctgcatgt 35745770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 127 - 290
Target Start/End: Original strand, 33435073 - 33435234
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    |||||||||||||||||||||||||||||||| | ||||||| |||||||||||||   ||||||||||||||| ||||||  ||||||| |||||| |     
T  33435073 tctctggtgtaccgggggcgaggggtgccctgttaatttggtactaaagtctggtgagacgatcacttttgattcgagatcgggagtcagttctttgtc- 33435171  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtg 290  Q
     | ||||| |||| | ||| |||||||||||||||||||||||||||||||| | |||||||||    
T  33435172 -tcaagttcgtttgtgggcatttgttttgtgctctttcggtggatcggaggtcgcgaggttgtg 33435234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 127 - 287
Target Start/End: Complemental strand, 47326002 - 47325845
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    ||||||||||||||||||||||||||||| |||| ||||||| ||| |||||||||| |||||| ||||||||||||||||  ||||||||||||||  |    
T  47326002 tctctggtgtaccgggggcgaggggtgccttgctaatttggtactatagtctggtgggccgatcgcttttgatttgagatcgggagtcagctctttg--a 47325905  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 287  Q
     | |||||||||||| ||| |||||  |||||||||||| |||||||||||| | ||||||    
T  47325904 ctcaagttggtttttgggc-tttgtgctgtgctctttcgatggatcggaggtcgcgaggtt 47325845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 127 - 278
Target Start/End: Complemental strand, 3419773 - 3419624
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    |||||||| ||||||||||||||||||||||| | ||||||| ||||||| |||||| | |||||||||||||| ||||||  ||||||||||||||  |    
T  3419773 tctctggtataccgggggcgaggggtgccctgttaatttggtactaaagtgtggtgggctgatcacttttgattcgagatcgggagtcagctctttg--a 3419676  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 278  Q
     | |||||||||||| ||||||  || ||||||||||||||||||| |||||    
T  3419675 ctcaagttggtttttgggctttgtttctgtgctctttcggtggatcagaggt 3419624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 127 - 278
Target Start/End: Original strand, 25160779 - 25160925
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||| ||||||   |||||  ||||  | |    
T  25160779 tctctggtgtaccgagggcgaggggtgccctgctaatttggttctatagtctggtggaccgattacttttgattcgagatcggaagtcaaatctt--gaa 25160876  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 278  Q
    ||||||||||||||| |||   ||| ||||||||||||||||||| ||||||    
T  25160877 attaagttggtttttgggc---tgtgttgtgctctttcggtggattggaggt 25160925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 127 - 287
Target Start/End: Original strand, 38306225 - 38306382
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    |||||||||||| ||||||||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||| |||||   ||||||| ||||||  |    
T  38306225 tctctggtgtacagggggcgaggggtgccctgctaatttggtactatagtctggtgggccgatcacttttgattcgagattgggagtcagttctttg--a 38306322  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 287  Q
     | |||||||||||| ||| ||||| ||||||||||||| ||| |||||||| | ||||||    
T  38306323 ctcaagttggtttttgggc-tttgtgttgtgctctttcgatggttcggaggtcgcgaggtt 38306382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 127 - 301
Target Start/End: Original strand, 3867080 - 3867252
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    |||||||||||||| |||||| ||||| |||||| ||||||| ||||| | |||||| | |||||||||||||| |||| |  ||||||| ||||||  |    
T  3867080 tctctggtgtaccgagggcgaagggtggcctgctaatttggtactaaaatatggtgggctgatcacttttgattcgagaccgggagtcagttctttg--a 3867177  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatg 301  Q
     | |||||||||||| |||||||| ||||||||||| ||||||||| ||||| | |||||| ||||| |||||||    
T  3867178 ctcaagttggtttttgggcttttgctttgtgctcttgcggtggatcagaggtcgcgaggttatggaaactgcatg 3867252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 127 - 287
Target Start/End: Original strand, 10244146 - 10244303
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    |||||||||||||||||| ||||||||||||||| ||||||| ||| | |||||||| |||||||||||||||| ||||||  ||||||| ||||||  |    
T  10244146 tctctggtgtaccgggggagaggggtgccctgctaatttggtgctataatctggtgggccgatcacttttgattcgagatcgggagtcagttctttg--a 10244243  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 287  Q
     | ||||| | |||||||| ||||| |||||||||||| |||| |||||||| | ||||||    
T  10244244 ctcaagttag-tttttggcctttgtgttgtgctctttcagtggttcggaggtcgcgaggtt 10244303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 131 - 287
Target Start/End: Original strand, 37794957 - 37795110
Alignment:
Q  131 tggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaatta 230  Q
    |||||||||||||||||||||||||||||| |||||||  || ||| |||||| ||| ||| |||||||| ||||||  ||||||| ||||||  | | |    
T  37794957 tggtgtaccgggggcgaggggtgccctgctaatttggtaatatagtatggtgggccgttcagttttgattcgagatcgggagtcagttctttg--agtca 37795054  T
Q  231 agttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 287  Q
    ||||||||||| ||| ||||| ||||||||||||||||| |||||||| | ||||||    
T  37795055 agttggtttttgggc-tttgtgttgtgctctttcggtggttcggaggtcgcgaggtt 37795110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 127 - 301
Target Start/End: Original strand, 8745117 - 8745287
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    ||||||||| |||| ||| |||||||| ||| |||||||||| ||||| |||||||| |||||||||||||||| ||||||  || |||| || ||||      
T  8745117 tctctggtgcaccgagggtgaggggtggccttctgatttggtcctaaattctggtgggccgatcacttttgattcgagatcgggattcagttcgttgg-- 8745214  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatg 301  Q
    || ||||| | |||| ||||||  || ||   |||||||||||||||||||| |||||||||||||| |||||||    
T  8745215 atcaagtttggttttgggcttt--ttatggtttctttcggtggatcggaggtcgagaggttgtggaagctgcatg 8745287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 134 - 287
Target Start/End: Complemental strand, 5860398 - 5860248
Alignment:
Q  134 tgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagt 233  Q
    ||||||||||||||||||||||||||| ||||||| ||| |||| ||||| || ||| ||||||||| ||||||  ||||||  ||||||  |   ||||    
T  5860398 tgtaccgggggcgaggggtgccctgctaatttggtactatagtccggtgggcctatcgcttttgattcgagatcgggagtcaattctttg--acgcaagt 5860301  T
Q  234 tggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 287  Q
    |||||||| ||| ||||| ||||||||||||||||| |||||||| | ||||||    
T  5860300 tggtttttgggc-tttgtgttgtgctctttcggtggttcggaggtcgcgaggtt 5860248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 34389718 - 34389783
Alignment:
Q  59 ttgggttgttaaggtgtttagggtgtttggaggatgcgtgtccgttgcgatgagccttttcctttt 124  Q
    |||||||||||||||||||||| |||||||||| ||||||| |||||||||| |||||||||||||    
T  34389718 ttgggttgttaaggtgtttaggttgtttggagggtgcgtgttcgttgcgatgggccttttcctttt 34389783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 14 - 127
Target Start/End: Complemental strand, 42533625 - 42533509
Alignment:
Q  14 tgttacacgggtccatggtcgtcgtcgctagctcttgtttc--atttttgggttgttaaggtgtttagggtgtttggaggatgcgtgt-ccgttgcgatg 110  Q
    |||||| |||||||||| ||||||||  | ||||||||||   |||||||||||||||||||||||| |||| |||||||| |||||| ||||||   ||    
T  42533625 tgttactcgggtccatgttcgtcgtcattggctcttgtttgtgatttttgggttgttaaggtgtttaaggtggttggaggaagcgtgtcccgttgttctg 42533526  T
Q  111 agccttttccttttgat 127  Q
    |||||||||||||||||    
T  42533525 agccttttccttttgat 42533509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 127
Target Start/End: Complemental strand, 47326261 - 47326141
Alignment:
Q  10 cctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgc 106  Q
    ||||||||||||||||||||| |||||||  ||||||||||||  |  ||||||||| ||| |||| |||| || ||||||||| |||||||| |||||     
T  47326261 cctttgttacacgggtccatgttcgtcgttactagctcttgtttgtgctttttgggtggtttaggtatttacggagtttggagggtgcgtgtcacgttgt 47326162  T
Q  107 gatgagccttttccttttgat 127  Q
    | |||||||||||||||||||    
T  47326161 gttgagccttttccttttgat 47326141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 127 - 223
Target Start/End: Original strand, 16954617 - 16954713
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttg 223  Q
    ||||||||||| | | || |||||||||||| |||||||||| |||||||||||| ||||||||||||||| || |||||| | |||||| ||||||    
T  16954617 tctctggtgtatcagaggtgaggggtgcccttctgatttggtcctaaagtctggttgaccgatcacttttgtttcgagatcgaaagtcagttctttg 16954713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 127 - 207
Target Start/End: Complemental strand, 42533369 - 42533289
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 207  Q
    ||||||||| | |||||| |||||||||||| |||||||||| |||||||||||||| | |||||||||||||| ||||||    
T  42533369 tctctggtgcatcgggggtgaggggtgccctcctgatttggtcctaaagtctggtgggctgatcacttttgattcgagatc 42533289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 185 - 287
Target Start/End: Complemental strand, 44353623 - 44353524
Alignment:
Q  185 ccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagag 284  Q
    |||||||||||||||||||||||  ||||||| |||||| |  ||| |||||||||| |||||| || |||||||||||||||||||||||||| | |||    
T  44353623 ccgatcacttttgatttgagatcgggagtcagttctttgac--ttatgttggtttttgggcttt-gtgttgtgctctttcggtggatcggaggtcgcgag 44353527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 44755591 - 44755664
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgattt 201  Q
    |||||||||||||| ||  |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||    
T  44755591 tctctggtgtaccgtggt-gaggggtgcccttctgatttggtcctaaagtctggtgggccgatcacttttgattt 44755664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 435
Target Start/End: Original strand, 34391427 - 34391482
Alignment:
Q  380 atactgtgttttcagtgttttgtttctattaaggtgtccgtcttaggtggtgatgt 435  Q
    |||||||||||  |||||||||||||||||||||||| ||||||||||||||||||    
T  34391427 atactgtgtttagagtgttttgtttctattaaggtgttcgtcttaggtggtgatgt 34391482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 139 - 225
Target Start/End: Original strand, 3478328 - 3478414
Alignment:
Q  139 cgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 225  Q
    |||||| |||||||||||| ||| |||||| ||||||| |||||| |||||||||||||||| ||||||  |||| || ||||||||    
T  3478328 cgggggtgaggggtgcccttctgttttggtcctaaagtttggtgggccgatcacttttgattcgagatcgggagttagttctttggc 3478414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 6716853 - 6716755
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 225  Q
    |||||||||||||| | | |||||||||||| |||||||  |  ||||||||||| | |||||||||||||||| ||||||  ||||||| ||||||||    
T  6716853 tctctggtgtaccgagagtgaggggtgcccttctgatttaatcataaagtctggttggccgatcacttttgattcgagatcgggagtcagttctttggc 6716755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 200
Target Start/End: Original strand, 1320758 - 1320831
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatt 200  Q
    |||||| |||| |||||| ||||||||||||  |||||||||  ||||||||||||| ||||||||||||||||    
T  1320758 tctctgatgtatcgggggtgaggggtgcccttttgatttggtcataaagtctggtgggccgatcacttttgatt 1320831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 38485520 - 38485609
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcag 216  Q
    ||||||||| || |||||  ||||||||||| |||| || ||||| ||||||||||| |||||||||||||||| ||||||  |||||||    
T  38485520 tctctggtggactgggggtaaggggtgcccttctgaatttgttctgaagtctggtgggccgatcacttttgattcgagatcgggagtcag 38485609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 223
Target Start/End: Complemental strand, 16829053 - 16828957
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttg 223  Q
    ||||| ||||| | |||| |||||||||||| |||||||||| |||||||||||| | | ||||||||||| || |||||| | |||||| ||||||    
T  16829053 tctctagtgtatcaggggtgaggggtgcccttctgatttggtcctaaagtctggttggctgatcacttttgtttcgagatcgaaagtcagttctttg 16828957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 127 - 280
Target Start/End: Complemental strand, 46133395 - 46133244
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    ||||||||| ||||| ||  ||| ||||||| |||||||||| || ||||||||||  |||||| ||||||||||||||||  ||||||| ||| |||      
T  46133395 tctctggtggaccggaggttaggagtgcccttctgatttggtgctgaagtctggtgagccgatcgcttttgatttgagatcgggagtcagttctctgg-- 46133298  T
Q  227 attaag-ttggttttttggcttttgttttgtgctctttcggtggatcggaggttg 280  Q
     | ||| ||||||||| ||||||| ||| ||| || ||||||||| |||||||||    
T  46133297 ttcaagtttggtttttgggctttt-tttggtgttccttcggtggaccggaggttg 46133244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 127
Target Start/End: Complemental strand, 3420029 - 3419912
Alignment:
Q  14 tgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cg-ttgcgat 109  Q
    ||||||||||||||||| |||| ||| ||||||||||||  |  ||||||||| ||| ||||||||| || ||||||||| |||||||| || ||| | |    
T  3420029 tgttacacgggtccatgttcgttgtcactagctcttgtttgtgctttttgggtggtttaggtgtttacggagtttggagggtgcgtgtcacgtttgtgtt 3419930  T
Q  110 gagccttttccttttgat 127  Q
    ||||| ||||||||||||    
T  3419929 gagccctttccttttgat 3419912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 101
Target Start/End: Original strand, 9106886 - 9106964
Alignment:
Q  23 ggtccatggtcgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 101  Q
    |||||||  |||||||||||||||||||||| | |||| || ||||||||||||||||||| || |||| || ||||||    
T  9106886 ggtccattttcgtcgtcgctagctcttgtttgagttttagggtgttaaggtgtttagggtgctttgagggtgggtgtcc 9106964  T

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Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 24324911 - 24324817
Alignment:
Q  131 tggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 225  Q
    |||||||||||||   ||||||||||| ||||||||||  |||||| |||||| ||||||| |||||||| ||||||  ||||||  ||||||||    
T  24324911 tggtgtaccggggtttaggggtgcccttctgatttggtcttaaagtttggtgggccgatcaattttgattcgagatcgggagtcaattctttggc 24324817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 301 - 435
Target Start/End: Complemental strand, 35745740 - 35745601
Alignment:
Q  301 gtggctcagcttgggtgttgaagtatg-----tttattttgagggttgctctttggaggtaagtagcgacgatgagtgttg-tggatactgtgttttcag 394  Q
    |||||||||||||||||||||||| ||     ||||||||||| | || ||||||| ||| ||||| ||||||| |||  | |||||  |||||||  ||    
T  35745740 gtggctcagcttgggtgttgaagtctgactgttttattttgagaggtgttctttgggggtgagtagtgacgatgggtgggggtggatgttgtgttt--ag 35745643  T
Q  395 tgt-tttgtttctattaaggtgtccgtcttaggtggtgatgt 435  Q
    ||| ||||||||| |||||||||| |||||||||||||||||    
T  35745642 tgtgtttgtttctgttaaggtgtctgtcttaggtggtgatgt 35745601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 47457139 - 47457041
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 225  Q
    ||||||||| | ||||||  ||||||||||  |||||| ||| || ||||||| |||||||||| |||||||||||||||   ||||||| ||||||||    
T  47457139 tctctggtggatcgggggtaaggggtgcccgtctgattaggtcctgaagtctgatggaccgatcgcttttgatttgagattgggagtcagttctttggc 47457041  T

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Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 16954350 - 16954474
Alignment:
Q  1 tggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt-catttttgggttgttaaggtgtttagggtgtttggaggatgcgtgt 99  Q
    ||||| ||| ||||||||| ||||| | || | |||||| ||| |||| |||| ||||||| | ||||||||||||||||||| ||||||||  ||| ||    
T  16954350 tggaggcagtctttgttactcgggtacttgtttgtcgtcactatctctagtttgcatttttcgattgttaaggtgtttagggtttttggaggtagcgggt 16954449  T
Q  100 c-cgttgcgatgagccttttccttt 123  Q
    | ||||| | |||||||||||||||    
T  16954450 ctcgttgagttgagccttttccttt 16954474  T

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Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 3478063 - 3478178
Alignment:
Q  16 ttacacgggtccatggtcgtcgtcgctagctcttgtt-tcatttttgggttgttaagg-tgtttagggtg-tttggaggatgcgtgtcc-gttgcgatga 111  Q
    |||||||||| |||  |||||||| ||||||||||||  | ||||||||||||||||| | ||| || || |||||||| |||||||||  ||| |||||    
T  3478063 ttacacgggttcatattcgtcgtcactagctcttgttggcgtttttgggttgttaaggtttttttggatgttttggagggtgcgtgtccttttgagatga 3478162  T
Q  112 gccttttccttttgat 127  Q
    ||||||||||||||||    
T  3478163 gccttttccttttgat 3478178  T

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Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 129
Target Start/End: Original strand, 8744858 - 8744980
Alignment:
Q  10 cctttgttacacgggtccatggtcgtcgtcgctagctcttgtttca--tttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgc 106  Q
    |||||||||| ||| ||| || |||||||| ||||| |||||||    ||||| ||||||||||||||||| | ||||||||||| ||| |||  ||||     
T  8744858 cctttgttactcggttccttgttcgtcgtcactagcccttgtttgcgttttttcggttgttaaggtgtttacgatgtttggaggaagcgagtcttgttga 8744957  T
Q  107 gatgagccttttccttttgatct 129  Q
    | |||||||| ||||||||||||    
T  8744958 gttgagccttctccttttgatct 8744980  T

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Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 224
Target Start/End: Original strand, 13311803 - 13311900
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 224  Q
    ||||||||| |||||||   ||||||||||  ||| ||||||  |  |||||||||| |||||||||||||||| ||||||  ||||||| |||||||    
T  13311803 tctctggtggaccggggataaggggtgcccgtctggtttggtcatgtagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttgg 13311900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 91
Target Start/End: Complemental strand, 6717059 - 6717024
Alignment:
Q  56 tttttgggttgttaaggtgtttagggtgtttggagg 91  Q
    |||||||||| |||||||||||||||||||||||||    
T  6717059 tttttgggtttttaaggtgtttagggtgtttggagg 6717024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 25160525 - 25160564
Alignment:
Q  14 tgttacacgggtccatggtcgtcgtcgctagctcttgttt 53  Q
    ||||||||||||||||| |||||||| |||||||||||||    
T  25160525 tgttacacgggtccatgttcgtcgtcactagctcttgttt 25160564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 293
Target Start/End: Original strand, 36449176 - 36449210
Alignment:
Q  259 tctttcggtggatcggaggttgagaggttgtggaa 293  Q
    |||||||||||||||||||||||||||| ||||||    
T  36449176 tctttcggtggatcggaggttgagaggtggtggaa 36449210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 293
Target Start/End: Complemental strand, 48162020 - 48161978
Alignment:
Q  251 ttttgtgctctttcggtggatcggaggttgagaggttgtggaa 293  Q
    ||||||||||||| |||||||| ||||| ||||||||||||||    
T  48162020 ttttgtgctcttttggtggatcagaggtcgagaggttgtggaa 48161978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 207
Target Start/End: Original strand, 25153231 - 25153264
Alignment:
Q  174 agtctggtggaccgatcacttttgatttgagatc 207  Q
    ||||||||||||||||||||||||||| ||||||    
T  25153231 agtctggtggaccgatcacttttgattcgagatc 25153264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 207
Target Start/End: Complemental strand, 27993606 - 27993573
Alignment:
Q  174 agtctggtggaccgatcacttttgatttgagatc 207  Q
    ||||||||||||||||||||||||||| ||||||    
T  27993606 agtctggtggaccgatcacttttgattcgagatc 27993573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 123
Target Start/End: Original strand, 33434817 - 33434931
Alignment:
Q  14 tgttacacgggtccatggtcgtcgtcgctagctcttgttt----catttttgggttgttaaggtgtttagggtgtttggaggatgcgtgt-ccgttgcga 108  Q
    |||||| |||||| ||| |||||||| ||||||| |||||    | ||||||||| ||| |||| |||||||||||||||||  ||| || |||||| |     
T  33434817 tgttactcgggtctatgttcgtcgtcactagctcctgttttgtgcttttttgggtggtttaggtatttagggtgtttggagggagcgggtcccgttgtgt 33434916  T
Q  109 tgagccttttccttt 123  Q
     ||||||||||||||    
T  33434917 cgagccttttccttt 33434931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 127
Target Start/End: Original strand, 37794710 - 37794826
Alignment:
Q  14 tgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcgatg 110  Q
    ||||| || |||||||| |||||||| ||||||||||||  |  ||||||||| ||| ||||||||| || ||||| ||| || ||||| | ||| | ||    
T  37794710 tgttatacaggtccatgttcgtcgtcactagctcttgtttgtgctttttgggtggtttaggtgtttacggagtttgaagggtgtgtgtcacattgtgttg 37794809  T
Q  111 agccttttccttttgat 127  Q
    ||| |||||||||||||    
T  37794810 agcattttccttttgat 37794826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 9349757 - 9349793
Alignment:
Q  171 taaagtctggtggaccgatcacttttgatttgagatc 207  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  9349757 taaagtctggtgggccgatcacttttgattcgagatc 9349793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 23983286 - 23983326
Alignment:
Q  246 ttttgttttgtgctctttcggtggatcggaggttgagaggt 286  Q
    |||| ||||||| |||||||||| |||||||||||||||||    
T  23983286 tttttttttgtgttctttcggtgtatcggaggttgagaggt 23983326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 121; Significance: 8e-62; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 127 - 302
Target Start/End: Complemental strand, 27031957 - 27031784
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||| |||||||||||||||||     
T  27031957 tctctggtgtaccgggggaaaggggtgccctgctgatttggttctaaagtctagtgggccgatcacttttgattcgagatcgagagtcagctctttggc- 27031859  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatgt 302  Q
     | |||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27031858 -tcaagttggttttagggattttgttttgtgctctttcggtggatcggaggttgagaggttgtggaagctgcatgt 27031784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 127 - 288
Target Start/End: Complemental strand, 46814584 - 46814425
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||  ||||||||| ||||||     
T  46814584 tctctggtgtaccgggggcaaggggtgccctgctgatttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagtcagctttttggc- 46814486  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttg 288  Q
     | |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  46814485 -tcaagttggttttttggcttttgttttgtgctctttcggtggatcggatgtcgagaggttg 46814425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 127 - 293
Target Start/End: Original strand, 24658893 - 24659057
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||  ||||||||||||||||     
T  24658893 tctctggtgtatcgggggcaaggggtgccctgctgatttggttctaaagtctggtgggccaatcacttttgattcgagatcgggagtcagctctttggc- 24658991  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaa 293  Q
     | |||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  24658992 -tgaagttggtttttgggctttggttttgtgctctttcggtggatcggaggtcgagaggttgtggaa 24659057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 127 - 298
Target Start/End: Original strand, 7857617 - 7857786
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||  |||||| |||||| ||     
T  7857617 tctctggtgtactgggggcgaggggtgccctgctgatttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagtcaactcttttgc- 7857715  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgc 298  Q
     | |||||||||||| | |||||||||||||||||||||||||||||| ||| |||||||||||||| ||||    
T  7857716 -tgaagttggtttttggccttttgttttgtgctctttcggtggatcggtggtcgagaggttgtggaagctgc 7857786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 127 - 293
Target Start/End: Complemental strand, 24684595 - 24684431
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    ||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| |||||||||||| ||| ||||||    ||||| ||||||  |    
T  24684595 tctctggtgtaccgggggcgaggggtgccctactaatttgattctaaagtctggtgggccgatcacttttaattcgagatcggatgtcagttctttg--a 24684498  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaa 293  Q
     |  ||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  24684497 ctctagttggtttttgggcttttgttttgtgctctttcggtggatcggaggtcgcgaggttgtggaa 24684431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 127 - 287
Target Start/End: Complemental strand, 24450047 - 24449890
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    ||||||||||||||||||||||||||||||||||  |||||| ||| ||| |||||| |||||||||||||||||||||||   |||||| |||||| |     
T  24450047 tctctggtgtaccgggggcgaggggtgccctgctattttggtactatagtttggtgggccgatcacttttgatttgagatcggaagtcagttctttgtc- 24449949  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 287  Q
     ||||||||| |||||||  ||||| ||||||||||| |||||||||||||| | ||||||    
T  24449948 -ttaagttgg-tttttgggatttgtgttgtgctcttttggtggatcggaggtcgcgaggtt 24449890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 127 - 287
Target Start/End: Complemental strand, 30686021 - 30685864
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    ||||||||||||| |||||||||||||||||||| ||||||| ||| ||||| |||| |||||||||||||||||||||||  ||||||| ||||||  |    
T  30686021 tctctggtgtacctggggcgaggggtgccctgctaatttggtactatagtcttgtgggccgatcacttttgatttgagatcgggagtcagttctttg--a 30685924  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 287  Q
     | ||||||| |||| ||| ||||| ||||||||||||||||| |||||||| | ||||||    
T  30685923 ctcaagttggcttttgggc-tttgtgttgtgctctttcggtggttcggaggtcgcgaggtt 30685864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 127 - 287
Target Start/End: Complemental strand, 46692936 - 46692779
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    |||||||||||||||||||||| ||||||||||| |||||||  || |||||||||| |||||||||||||||| ||||||  |||| || ||||||||     
T  46692936 tctctggtgtaccgggggcgagaggtgccctgctaatttggtgatatagtctggtgggccgatcacttttgattcgagatcgggagttagttctttggc- 46692838  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 287  Q
     | |||||||||||| ||| ||||| ||||||||||||||||| |||||||| | ||||||    
T  46692837 -tcaagttggtttttgggc-tttgtgttgtgctctttcggtggttcggaggtcgcgaggtt 46692779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 127 - 287
Target Start/End: Original strand, 41920417 - 41920573
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    |||||||||||| |||| |||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||| ||||||  ||||||| ||||||  |    
T  41920417 tctctggtgtactgggg-cgaggggtgccctgctaatttggtactacagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttg--a 41920513  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 287  Q
     | ||||||| |||| ||| ||||| |||||||||||||||||||||||||| | ||||||    
T  41920514 ctcaagttggattttgggc-tttgtgttgtgctctttcggtggatcggaggtcgcgaggtt 41920573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 127 - 287
Target Start/End: Complemental strand, 5389538 - 5389381
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    |||||||||||||||||||||||||||||| ||| ||||||| ||| ||||||  || |||||||||||||||| ||||||  ||||||| ||||||  |    
T  5389538 tctctggtgtaccgggggcgaggggtgcccagctaatttggtactatagtctgaagggccgatcacttttgattcgagatcgggagtcagttctttg--a 5389441  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 287  Q
     | ||||| |||||| ||| ||||| ||||||||||||||||| |||||||| | ||||||    
T  5389440 ctcaagtttgtttttgggc-tttgtgttgtgctctttcggtggttcggaggtcgcgaggtt 5389381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 127 - 287
Target Start/End: Complemental strand, 31585877 - 31585720
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    |||||||||||| | ||| ||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||| ||||||  ||||||| ||||||  |    
T  31585877 tctctggtgtactgagggtgaggggtgccctgctaatttggtactatagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttg--a 31585780  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 287  Q
     | |||||||||||| ||| ||||| ||||||| ||||||||| |||||||| | ||||||    
T  31585779 ctcaagttggtttttgggc-tttgtgttgtgctatttcggtgggtcggaggtcgcgaggtt 31585720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 135 - 287
Target Start/End: Original strand, 5459133 - 5459282
Alignment:
Q  135 gtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagtt 234  Q
    |||||||||||||||||| ||||||| ||||||| ||| |||||||||| |||||||||||||||| ||||||  ||||||  | ||||  | | |||||    
T  5459133 gtaccgggggcgaggggtaccctgctaatttggtgctatagtctggtgggccgatcacttttgattcgagatcgggagtcaattatttg--attcaagtt 5459230  T
Q  235 ggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 287  Q
    | ||||| ||| ||||| |||||||||||| |||| |||||||||| ||||||    
T  5459231 gatttttgggc-tttgtgttgtgctctttcagtggttcggaggttgcgaggtt 5459282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 299 - 435
Target Start/End: Complemental strand, 46814387 - 46814246
Alignment:
Q  299 atgtggctcagcttgggtgttgaagtatg-----tttattttgagggttgctctttggaggtaagtagcgacgatg-agtgttgtggatactgtgttttc 392  Q
    ||||||||| || ||||||||||||||||     ||||||| ||||| || | ||||||||| ||||| ||||||| |  |||||||||||||||||| |    
T  46814387 atgtggctcggcgtgggtgttgaagtatgggagttttatttcgaggggtgttatttggaggtgagtagtgacgatggacggttgtggatactgtgtttac 46814288  T
Q  393 agtgttttgtttctattaaggtgtccgtcttaggtggtgatgt 435  Q
    || |||| |||||| |||||||||| |||||||||||||||||    
T  46814287 agggttt-gtttctgttaaggtgtctgtcttaggtggtgatgt 46814246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 299 - 435
Target Start/End: Original strand, 7857814 - 7857954
Alignment:
Q  299 atgtggctcagcttgggtgttgaagtatg-----tttattttgagggttgctctttggaggtaagtagcgacgatgagtg-ttgtggatactgtgttttc 392  Q
    ||||||||||| |||||||||||||| ||     ||||||||||||| || ||| ||| ||| ||||| | ||||| ||| |||||||  | |||||| |    
T  7857814 atgtggctcagtttgggtgttgaagtctgggagttttattttgaggggtgttctatgggggtgagtagtggcgatgggtggttgtgga--ccgtgtttac 7857911  T
Q  393 agtgttttgtttctattaaggtgtccgtcttaggtggtgatgt 435  Q
    |||||||||||||| ||||||||||||||||||||| ||||||    
T  7857912 agtgttttgtttctgttaaggtgtccgtcttaggtgatgatgt 7857954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 9313406 - 9313308
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 225  Q
    ||||| ||||| |||| | |||||||||||| |||||||||| ||||||||| |||| | |||||||||||||| ||||||  ||||||| ||||||||    
T  9313406 tctctcgtgtatcgggcgtgaggggtgcccttctgatttggtcctaaagtctagtgggctgatcacttttgattcgagatcgggagtcagttctttggc 9313308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 6583314 - 6583253
Alignment:
Q  146 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 207  Q
    |||||||||| | |||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  6583314 gaggggtgcctttctgatttggtcctaaagtctggtggaccgatcacttttgattcgagatc 6583253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 30686276 - 30686158
Alignment:
Q  14 tgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcgatg 110  Q
    ||||||||| ||||||| |||| ||| ||||||||||||  |  ||||||||| ||| ||||||||| || ||||||||| | |||||| ||||| | ||    
T  30686276 tgttacacgagtccatgttcgttgtcactagctcttgtttgtgctttttgggtggtttaggtgtttacggagtttggagggttcgtgtcacgttgtgttg 30686177  T
Q  111 agccttttccttttgatct 129  Q
    |||||||||||||||||||    
T  30686176 agccttttccttttgatct 30686158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 4651744 - 4651833
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcag 216  Q
    ||||||||||||||||||  ||||||||||| |||| || ||||  |||||||| || |||||||||||||||| ||||||  |||||||    
T  4651744 tctctggtgtaccgggggtaaggggtgcccttctgaatttgttccgaagtctggggggccgatcacttttgattcgagatcgggagtcag 4651833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 16147264 - 16147341
Alignment:
Q  1 tggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt-catttttgggttgttaaggtgttt 77  Q
    ||||| |||||| ||||||||||| ||||| |||||||| ||||||||| ||| | ||||||||||||||||||||||    
T  16147264 tggaggcagcctctgttacacgggcccatgttcgtcgtcactagctcttatttgcgtttttgggttgttaaggtgttt 16147341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 46814851 - 46814750
Alignment:
Q  1 tggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt-catttttgggttgttaaggtgtttagggtgtttggaggatgcgtgt 99  Q
    |||||||| ||| | || |||||||||||| | |||||| || |||||||||  |  |||||||||||| |||||||||||||||||||||| |||||||    
T  46814851 tggagacaacctctatttcacgggtccatgtttgtcgtcacttgctcttgttggcgcttttgggttgtttaggtgtttagggtgtttggagggtgcgtgt 46814752  T
Q  100 cc 101  Q
    ||    
T  46814751 cc 46814750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 17033571 - 17033647
Alignment:
Q  148 ggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 224  Q
    |||||||||| |||||||||| ||| |||||||||| |||||||||||||| | ||||||  ||||||| |||||||    
T  17033571 ggggtgcccttctgatttggtcctatagtctggtgggccgatcacttttgaatcgagatcgggagtcagttctttgg 17033647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 34774847 - 34774907
Alignment:
Q  139 cgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgat 199  Q
    |||||| ||| |||||||| |||||||||| |||| |||||||||||||||||||||||||    
T  34774847 cgggggtgagtggtgcccttctgatttggtcctaacgtctggtggaccgatcacttttgat 34774907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 7857360 - 7857439
Alignment:
Q  14 tgttacacgggtccatggtcgtcgtcgctagctcttgttt-cat-ttttgggttgttaaggtgtttagggtgtttggagg 91  Q
    |||||| |||||||||| |||||||| ||||||||||||| | | ||| ||||||| |||||||||||||||||||||||    
T  7857360 tgttactcgggtccatgttcgtcgtcactagctcttgtttgcgtctttggggttgtcaaggtgtttagggtgtttggagg 7857439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 127
Target Start/End: Complemental strand, 31586133 - 31586016
Alignment:
Q  14 tgttacacgggtccatggtcgtcgtcgctagctcttgtttcat---ttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcgat 109  Q
    ||||||||||||||||| |||||||| || ||||||||||  |   |||||||| ||| |||||||||  | ||||||||| |||||||| ||||  | |    
T  31586133 tgttacacgggtccatgttcgtcgtcactggctcttgttttgtgctttttgggtggtttaggtgtttacagagtttggagggtgcgtgtcacgttatgtt 31586034  T
Q  110 gagccttttccttttgat 127  Q
    ||||||||||||||||||    
T  31586033 gagccttttccttttgat 31586016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 52278208 - 52278279
Alignment:
Q  8 agcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt-tcatttttgggttgttaaggtgttta 78  Q
    |||||||||| |||||||||||| |||||||  ||||||||||||  | |||||||||||||||||||||||    
T  52278208 agcctttgtttcacgggtccatgttcgtcgttactagctcttgttggcgtttttgggttgttaaggtgttta 52278279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 377 - 435
Target Start/End: Complemental strand, 27031677 - 27031620
Alignment:
Q  377 tggatactgtgttttcagtgttttgtttctattaaggtgtccgtcttaggtggtgatgt 435  Q
    |||||||||||||| ||| |||| |||||| ||||||||||||||||||||||||||||    
T  27031677 tggatactgtgtttacagggttt-gtttctgttaaggtgtccgtcttaggtggtgatgt 27031620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 20113638 - 20113565
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatt 200  Q
    |||| ||||||||||||||||||||||||||||| |||||||  || |||||| |||  |||||| ||||||||    
T  20113638 tctcgggtgtaccgggggcgaggggtgccctgctaatttggtattatagtctgctgggacgatcatttttgatt 20113565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 223
Target Start/End: Original strand, 19598600 - 19598696
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttg 223  Q
    ||||||||| |||| |||  ||||||||||  ||| || ||| || ||||||||||| |||||| ||||||||| |||||| |||||||| ||||||    
T  19598600 tctctggtggaccgagggtaaggggtgcccgtctggttgggtcctgaagtctggtgggccgatcgcttttgattcgagatcgagagtcagttctttg 19598696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 435
Target Start/End: Original strand, 24659123 - 24659230
Alignment:
Q  328 tttattttgagggttgctctttggaggtaagtagcgacgatgagtg-ttgtggatactgtgttttcagtgttttgtttctattaaggtgtccgtcttagg 426  Q
    ||||||||||||| || | ||||| ||| ||||| ||||||| ||| || ||| |||||||||| || ||||| |||||| ||||||||||| |||||||    
T  24659123 tttattttgaggggtgttatttgggggtgagtagtgacgatgggtggttatggttactgtgtttacaatgttt-gtttcttttaaggtgtccatcttagg 24659221  T
Q  427 tggtgatgt 435  Q
    |||| ||||    
T  24659222 tggttatgt 24659230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 40933839 - 40933907
Alignment:
Q  139 cgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 207  Q
    |||||| |||||||| ||| ||| |||||||| ||||| ||||| ||||||| ||||||||||||||||    
T  40933839 cgggggtgaggggtgtcctcctgttttggttcgaaagtttggtgaaccgatcgcttttgatttgagatc 40933907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 10785681 - 10785582
Alignment:
Q  32 tcgtcgtcgctagctcttgttt-catttttggg-ttgttaaggtgtttagggtgtttggaggatgcgtgt-ccgttgcgatgagccttttccttttgatc 128  Q
    |||||||| ||| | ||||||| |||||||||| ||||||||||||||||||||||||||||  ||  || || ||| | ||||||||||||||||||||    
T  10785681 tcgtcgtcactaacccttgtttgcatttttggggttgttaaggtgtttagggtgtttggagggagcaggtcccattgagctgagccttttccttttgatc 10785582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 27905411 - 27905457
Alignment:
Q  162 atttggttctaaagtctggtggaccgatcacttttgatttgagatca 208  Q
    |||||| | |||||||||||||||||||||||||||||| |||||||    
T  27905411 atttgggtttaaagtctggtggaccgatcacttttgattcgagatca 27905457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 293
Target Start/End: Original strand, 27102154 - 27102317
Alignment:
Q  127 tctctggtgtaccgggggcgagggg-tgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 225  Q
    |||||||||||||| ||| |||||| |||||| ||| ||||||   |||||||   || |||||||||||||||| ||||||  ||||||| |||||||     
T  27102154 tctctggtgtaccgagggtgagggggtgcccttctgttttggtctcaaagtctaacgggccgatcacttttgattcgagatcgggagtcagttctttgg- 27102252  T
Q  226 aattaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaa 293  Q
     || ||||| | |||| ||||||  ||  |   |||||||||||||||||||| ||||||| ||||||    
T  27102253 -atcaagtttggttttgggcttt--ttacggtttctttcggtggatcggaggtcgagaggtggtggaa 27102317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 42374131 - 42374216
Alignment:
Q  131 tggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcag 216  Q
    |||||||||| |||   |||||||||| ||||||||||  |   |||||||||||||||| ||||||||||||||||  |||||||    
T  42374131 tggtgtaccgagggtttggggtgcccttctgatttggtcatgttgtctggtggaccgatcgcttttgatttgagatcgggagtcag 42374216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 27032231 - 27032147
Alignment:
Q  18 acacgggtccatggtcgtcgtcgctagctcttgtt-tcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 101  Q
    |||||||||  || |||||||| || ||||||||| ||  |||||||||||| |||||| ||||||||||||||| || ||||||    
T  27032231 acacgggtctttgttcgtcgtcacttgctcttgttatcgcttttgggttgtttaggtgtgtagggtgtttggagggtgtgtgtcc 27032147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 38545080 - 38545017
Alignment:
Q  38 tcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 101  Q
    |||||||||||||||| | |||||||| |||||| ||||||||||| || |||| || ||||||    
T  38545080 tcgctagctcttgtttgagttttgggtcgttaagatgtttagggtgctttgagggtgtgtgtcc 38545017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 92
Target Start/End: Original strand, 27102059 - 27102089
Alignment:
Q  62 ggttgttaaggtgtttagggtgtttggagga 92  Q
    |||||||||||||||||||||||||||||||    
T  27102059 ggttgttaaggtgtttagggtgtttggagga 27102089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 38544828 - 38544758
Alignment:
Q  154 ccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 224  Q
    |||| ||||||||||  | ||||||||||| |||||| ||||||||| ||||||  ||||||| |||||||    
T  38544828 cccttctgatttggtcatgaagtctggtgggccgatcgcttttgattcgagatcgggagtcagttctttgg 38544758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 24450308 - 24450214
Alignment:
Q  10 cctttgttacacgggtccatggtcgtcgtcgctagctcttgttt----catttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc 100  Q
    ||||||||| | ||||||||| |||||||| |||||||||||||      ||||||||| ||| ||||||||| || |||||| || ||||||||    
T  24450308 cctttgttaaatgggtccatgttcgtcgtctctagctcttgtttgtgctttttttgggtggtttaggtgtttacggagtttggggggtgcgtgtc 24450214  T

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Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 32864659 - 32864598
Alignment:
Q  146 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 207  Q
    |||||||||||| | |||||||| |||||| ||||||| || ||||||||| ||| ||||||    
T  32864659 gaggggtgcccttccgatttggtcctaaaggctggtgggccaatcacttttaattcgagatc 32864598  T

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Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 41920191 - 41920228
Alignment:
Q  16 ttacacgggtccatggtcgtcgtcgctagctcttgttt 53  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  41920191 ttacacgggtccatgttcgtcgtcactagctcttgttt 41920228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 24658681 - 24658725
Alignment:
Q  57 ttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 101  Q
    |||||||||||| || ||||||||||||||||||| || ||||||    
T  24658681 ttttgggttgtttagatgtttagggtgtttggagggtgtgtgtcc 24658725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 112; Significance: 2e-56; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 127 - 293
Target Start/End: Complemental strand, 23328467 - 23328303
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||  |||| |||| ||||||     
T  23328467 tctctggtgtaccgggggcgaggggtgccctgttgatttggttctaaagtttggtggaccgatcacttttgattcgagatcgggagttagctttttggc- 23328369  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaa 293  Q
     | ||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23328368 -tcaagttggtttttgagcttttgttttgtgctctttcggtggatcggaggtcgagaggttgtggaa 23328303  T

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Target: chr3; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 143 - 302
Target Start/End: Original strand, 45398776 - 45398933
Alignment:
Q  143 ggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggtttttt 242  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||| |||||||||||||||  | ||||||||||||||     
T  45398776 ggcgaggggtgccctgctgatttggatttaaagtctggtggaccgatcacttttgattcgagatcgagagtcagctctttg--atttaagttggtttttg 45398873  T
Q  243 ggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatgt 302  Q
    |||||||||||| |||||||||| |||||||||||| |||||||||||||| ||||||||    
T  45398874 ggcttttgttttatgctctttcgatggatcggaggtcgagaggttgtggaagctgcatgt 45398933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 127 - 302
Target Start/End: Complemental strand, 40023688 - 40023516
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    ||||| |||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||  |||||   ||||||||     
T  40023688 tctctagtgtaccgggggcgaggg-tgccctgctgattttgttttaaagtctggtggaccgatcacttttgattcgagatcgggagtcgattctttggc- 40023591  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatgt 302  Q
     |||||||||||||| |||||||||||||||||||||||||||||| ||||  | |||||||||||| ||||||||    
T  40023590 -ttaagttggtttttgggcttttgttttgtgctctttcggtggatcagaggacgggaggttgtggaagctgcatgt 40023516  T

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Target: chr3; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 127 - 301
Target Start/End: Original strand, 19176467 - 19176638
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    |||||| ||||||||| | ||||| ||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||  ||||||| ||||||  |    
T  19176467 tctctgatgtaccgggagtgaggg-tgccctgctaatttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttg--a 19176563  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatg 301  Q
     | |||||||||||| |||||||| |||||||||||| |||||||||||||| |  ||||||||||| |||||||    
T  19176564 ctcaagttggtttttgggcttttgatttgtgctcttttggtggatcggaggtcgcaaggttgtggaagctgcatg 19176638  T

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Target: chr3; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 128 - 287
Target Start/End: Complemental strand, 2392622 - 2392466
Alignment:
Q  128 ctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaa 227  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| || |||||||||||||||||||||||| |||||    |||||| |||||| |      
T  2392622 ctctggtgtaccgggggcgaggggtgccctgctaatttggtactatagcctggtggaccgatcacttttgattcgagattggaagtcagttctttgtc-- 2392525  T
Q  228 ttaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 287  Q
    |||||||||||||| ||| ||||| |||||||||||||||||||||||||| | ||||||    
T  2392524 ttaagttggtttttgggc-tttgtgttgtgctctttcggtggatcggaggtcgcgaggtt 2392466  T

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Target: chr3; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 127 - 290
Target Start/End: Complemental strand, 9584170 - 9584009
Alignment:
Q  127 tctctggtgtaccgggggcgag-gggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 225  Q
    ||||| |||||||||||| ||| |||||||||||| ||||| | ||||||||||||||| ||||||||||||||| ||||||  ||||||| |||||| |    
T  9584170 tctcttgtgtaccggggg-gagagggtgccctgctaatttgatactaaagtctggtggatcgatcacttttgattcgagatcgggagtcagttctttgtc 9584072  T
Q  226 aattaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtg 290  Q
      | ||| |||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||    
T  9584071 --tcaagatggtttttgggcttttgttttgtgatctttcggtggatcggaggttgcgaggttgtg 9584009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 127 - 287
Target Start/End: Complemental strand, 34475871 - 34475714
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| |||||||||||||||| ||||||  ||||||  ||||  | |    
T  34475871 tctctggtgtaccgggggcgaggggtgccctgctaatttgtttctatagtctggtgggccgatcacttttgattcgagatcgggagtcaaatctt--gga 34475774  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 287  Q
    ||||||||| ||||| ||| ||||| ||||||||||||||||||| |||||| | ||||||    
T  34475773 attaagttgatttttgggc-tttgtgttgtgctctttcggtggattggaggtcgcgaggtt 34475714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 127 - 287
Target Start/End: Original strand, 20611747 - 20611904
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    |||||||||||||||||||||||||||||||||| |||| || ||| ||| || ||| ||||||| |||||||| ||||||  ||||||| ||||||  |    
T  20611747 tctctggtgtaccgggggcgaggggtgccctgctaatttcgtactatagtttgttgggccgatcatttttgattcgagatcgggagtcagttctttg--a 20611844  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 287  Q
     |||||||||||||| ||| ||||  |||||||||||||||||||||||||| | ||||||    
T  20611845 cttaagttggtttttgggc-tttgcgttgtgctctttcggtggatcggaggtcgcgaggtt 20611904  T

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Target: chr3; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 162 - 293
Target Start/End: Original strand, 43012374 - 43012503
Alignment:
Q  162 atttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttttggcttttgttttgtgctct 261  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||  ||||||| ||||||  | | ||||||||||||  ||||||||||||||||||    
T  43012374 atttggttctaaagtctggtggcccgatcacttttgattcgagatcgggagtcagttctttg--actcaagttggtttttgagcttttgttttgtgctct 43012471  T
Q  262 ttcggtggatcggaggttgagaggttgtggaa 293  Q
    ||||||| ||| ||||| | ||||||||||||    
T  43012472 ttcggtgaatcagaggtcgcgaggttgtggaa 43012503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 134 - 278
Target Start/End: Original strand, 45163824 - 45163967
Alignment:
Q  134 tgtaccgggggcgaggggtgccctgctgatttggttctaaagtct--ggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaa 231  Q
    ||||||| ||||||||||||||||||| ||||||| ||| |||||   |||| |||||||||||||||| |||||||  |||||| | |||| |  ||||    
T  45163824 tgtaccgagggcgaggggtgccctgctaatttggtactatagtcttgtgtgggccgatcacttttgattcgagatcagaagtcagttttttgtc--ttaa 45163921  T
Q  232 gttggttttttggcttttgttttgtgctctttcggtggatcggaggt 278  Q
    |||||||||| ||| ||||| ||||||||||||||||||||||||||    
T  45163922 gttggtttttgggc-tttgtgttgtgctctttcggtggatcggaggt 45163967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 40023932 - 40023829
Alignment:
Q  21 cgggtccatggtcgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtccgttgcgatgagccttttcc 120  Q
    ||||||| || ||||| || |||||||| ||||  || |||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||    
T  40023932 cgggtccttgttcgtcctcactagctctcgtttttttgttgggttgttaaggtgtttaaggtgtttggagggtgcgtgtccgttgtgatgagccttttcc 40023833  T
Q  121 tttt 124  Q
    ||||    
T  40023832 tttt 40023829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 128 - 206
Target Start/End: Complemental strand, 2394369 - 2394291
Alignment:
Q  128 ctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagat 206  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| || |||||||||||||||||||||||| |||||    
T  2394369 ctctggtgtaccgggggcgaggggtgccctgctaatttggtactatagcctggtggaccgatcacttttgattcgagat 2394291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 14193908 - 14193983
Alignment:
Q  131 tggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagat 206  Q
    |||||||||||| | |||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||    
T  14193908 tggtgtaccgggagtgaggggtgcccttctgatttggtcctaaagtctggcggaccgatcacttttgattcgagat 14193983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 127
Target Start/End: Original strand, 47235420 - 47235541
Alignment:
Q  10 cctttgttacacgggtccatggtcgtcgtcgctagctcttgtttca---tttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttg 105  Q
    ||||||||||||||||||||| || ||||| |||||||||||||     ||||||||| ||| ||||||||| || ||||||||| |||||||| |||||    
T  47235420 cctttgttacacgggtccatgttcatcgtctctagctcttgtttgtgtttttttgggtggtttaggtgtttacggagtttggagggtgcgtgtcacgttg 47235519  T
Q  106 cgatgagccttttccttttgat 127  Q
     | |||||||||||||||||||    
T  47235520 tgttgagccttttccttttgat 47235541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 25647386 - 25647507
Alignment:
Q  9 gcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcatttttg-ggttgttaaggtgtttagggtgtttggaggatgcgtgt-ccgtt 104  Q
    ||||||||||| ||||||| || |||||||| ||||||||||||  | ||||||  ||||||||||||||||||||||||||||||| ||| || |||||    
T  25647386 gcctttgttactcgggtccttgttcgtcgtcactagctcttgttcgtgatttttaaggttgttaaggtgtttagggtgtttggaggaagcgagtcccgtt 25647485  T
Q  105 gcgatgagccttttccttttga 126  Q
    | | || |||||||||||||||    
T  25647486 gagttgtgccttttccttttga 25647507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 330 - 435
Target Start/End: Original strand, 45398993 - 45399099
Alignment:
Q  330 tattttgagggttgctctttggaggtaagtagcgacgatgagtg-ttgtggatactgtgttttcagtgttttgtttctattaaggtgtccgtcttaggtg 428  Q
    ||||||| ||| || || |||| ||| ||||| |||||||  || ||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||    
T  45398993 tattttgtggggtgttcgttgggggtgagtagtgacgatggatgattgtggatattgtgtttacagtgttttgtttctgttaaggtgtccgtcttaggtg 45399092  T
Q  429 gtgatgt 435  Q
    |||||||    
T  45399093 gtgatgt 45399099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 299 - 433
Target Start/End: Complemental strand, 23328270 - 23328131
Alignment:
Q  299 atgtggctcagcttgggtgttgaagtatg-----tttattttgagggttgctctttggaggtaagtagcgacgatgagtg-ttgtggatactgtgttttc 392  Q
    |||||||||||||||||||||||||| ||     ||||||||||| | || ||||||| ||| ||||| ||||||| ||| ||||||||| |||| || |    
T  23328270 atgtggctcagcttgggtgttgaagtctgggagttttattttgagtggtgttctttgggggtgagtagtgacgatgggtggttgtggatattgtgcttac 23328171  T
Q  393 agtgttttgtttctattaaggtgtccgtcttaggtggtgat 433  Q
    ||||||| |||||| |||||  |||||||||||||||||||    
T  23328170 agtgttt-gtttctgttaagaggtccgtcttaggtggtgat 23328131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 373 - 435
Target Start/End: Complemental strand, 40023412 - 40023350
Alignment:
Q  373 gttgtggatactgtgttttcagtgttttgtttctattaaggtgtccgtcttaggtggtgatgt 435  Q
    ||||||||||| |||||| ||||||||||||||| |||||||||| |||||||||||||||||    
T  40023412 gttgtggataccgtgtttacagtgttttgtttctgttaaggtgtctgtcttaggtggtgatgt 40023350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 233 - 298
Target Start/End: Original strand, 21342603 - 21342668
Alignment:
Q  233 ttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgc 298  Q
    ||||||||| ||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||    
T  21342603 ttggtttttaggcttttgttttgtgctctttcgatggatcagaggtcgagaggttgtggaagctgc 21342668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 14193641 - 14193763
Alignment:
Q  9 gcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcattttt-gggttgttaaggtgtttagggtgtttggaggatgcgtgt-ccgtt 104  Q
    ||||||||||| ||||||| |  |||||||| ||||||||||||    |||||| |||||||||||||||||||||| ||||||||| ||| || |||||    
T  14193641 gcctttgttactcgggtccttattcgtcgtcactagctcttgttcgcgatttttggggttgttaaggtgtttagggtttttggaggaagcgagtcccgtt 14193740  T
Q  105 gcgatgagccttttccttttgat 127  Q
    | | || ||||||||||||||||    
T  14193741 gagttgtgccttttccttttgat 14193763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 287
Target Start/End: Original strand, 17550968 - 17551078
Alignment:
Q  174 agtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttttggcttttgttttgtgctctttcggtggatcg 273  Q
    |||||||||| |||||||||||||||| ||||||  ||||||| ||||||  | | |||||||||||| ||| ||||| ||||||||||||| || ||||    
T  17550968 agtctggtgggccgatcacttttgattcgagatcgggagtcagttctttg--actcaagttggtttttgggc-tttgtgttgtgctctttcgatgcatcg 17551064  T
Q  274 gaggttgagaggtt 287  Q
    ||||| | ||||||    
T  17551065 gaggtcgcgaggtt 17551078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 127
Target Start/End: Original strand, 20611492 - 20611608
Alignment:
Q  14 tgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcgatg 110  Q
    ||||||||||||||||| | |||||  ||||||||||||  |  ||||||||| ||| ||||||||| |  ||||||||| |||||||| ||||| | ||    
T  20611492 tgttacacgggtccatgtttgtcgttactagctcttgtttgtgctttttgggtagtttaggtgtttacgaagtttggagggtgcgtgtcacgttgtgttg 20611591  T
Q  111 agccttttccttttgat 127  Q
    |||||||||||||||||    
T  20611592 agccttttccttttgat 20611608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 207
Target Start/End: Original strand, 25647648 - 25647728
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 207  Q
    |||||||||||||||| | || ||||||||| |||||||||| ||||||||||  || || ||||||||||||| ||||||    
T  25647648 tctctggtgtaccgggagtgaagggtgcccttctgatttggtcctaaagtctgacgggcctatcacttttgattcgagatc 25647728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 14879421 - 14879479
Alignment:
Q  149 gggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 207  Q
    ||||||||| |||||| ||| |||||||||||||| |||||||||||||||| ||||||    
T  14879421 gggtgcccttctgattgggtcctaaagtctggtgggccgatcacttttgattcgagatc 14879479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 21 - 129
Target Start/End: Original strand, 37123106 - 37123218
Alignment:
Q  21 cgggtccatggtcgtcgtcgctagctcttgttt---catttttgggttgttaaggtgtttagggtgtttggaggatgcgtg-tccgttgcgatgagcctt 116  Q
    ||||||| || |||||||| |||||||||||||     |||| |||||||||||| ||||||||||||||||||| ||| | ||| ||| | |||| |||    
T  37123106 cgggtccttgttcgtcgtcactagctcttgtttgtgttttttggggttgttaaggagtttagggtgtttggaggaagcgggttccattgagttgagtctt 37123205  T
Q  117 ttccttttgatct 129  Q
    |||||||||||||    
T  37123206 ttccttttgatct 37123218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 147 - 287
Target Start/End: Original strand, 31482868 - 31483005
Alignment:
Q  147 aggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttttggct 246  Q
    |||||| |||| || ||||||||||| ||||||| || | |||||||||||||| ||||||  || |||  ||||    |||||||||| ||||| ||||    
T  31482868 aggggtaccctactaatttggttctatagtctggcgggcggatcacttttgattcgagatcgggaatcaaatcttaa--aattaagttgatttttgggct 31482965  T
Q  247 tttgttttgtgctctttcggtggatcggaggttgagaggtt 287  Q
    || || ||||||||||||||||||| |||||| | ||||||    
T  31482966 tt-gtgttgtgctctttcggtggattggaggtcgcgaggtt 31483005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 1653246 - 1653176
Alignment:
Q  21 cgggtccatggtcgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttggagg 91  Q
    |||||||||  |||| ||||||||||||||||| | |||| |||||||| ||||||||| |||||| ||||    
T  1653246 cgggtccatactcgttgtcgctagctcttgtttgagttttaggttgttatggtgtttagagtgttttgagg 1653176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 224
Target Start/End: Complemental strand, 14755380 - 14755285
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 224  Q
    ||||||||||||||  || ||||||||||||  |  ||| || |||||||||||||| ||||||||||||||||  |||||  ||||||| |||||||    
T  14755380 tctctggtgtaccgaaggtgaggggtgccctttt--ttttgtgctaaagtctggtgggccgatcacttttgattcaagatcgggagtcagttctttgg 14755285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 30935507 - 30935434
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatt 200  Q
    ||||||||| ||||||||  ||||||||||| ||||||||||| | |||| |||||| | |||| |||||||||    
T  30935507 tctctggtggaccgggggtaaggggtgcccttctgatttggttttgaagtttggtgggctgatcgcttttgatt 30935434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 34476125 - 34476037
Alignment:
Q  14 tgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc 100  Q
    ||||||||||||||||| |||||||| ||||||||||||  |  |||||| || ||| ||||||||| || ||||||||| || |||||    
T  34476125 tgttacacgggtccatgttcgtcgtctctagctcttgtttgtgctttttgagtggtttaggtgtttacggagtttggagggtgggtgtc 34476037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 224
Target Start/End: Original strand, 37123346 - 37123443
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 224  Q
    |||||| |||||||  || ||||||||||||  || |||||| ||||| | |||||| |||||||||||||||| |||||   ||||||| |||||||    
T  37123346 tctctgatgtaccgaaggagaggggtgcccttatgttttggtcctaaattttggtgggccgatcacttttgattcgagattgggagtcagttctttgg 37123443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 224
Target Start/End: Complemental strand, 33144020 - 33143969
Alignment:
Q  173 aagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 224  Q
    |||||||||||| ||||||||||||||| ||||||  ||||||| |||||||    
T  33144020 aagtctggtggatcgatcacttttgattcgagatcgggagtcagttctttgg 33143969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 47945669 - 47945768
Alignment:
Q  127 tctctggtgtacc-gggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 225  Q
    ||||||||| ||| |||||  ||||||||||  ||| || ||| |||||||| ||||| |||||||||||||||| ||||||  ||||||| | ||||||    
T  47945669 tctctggtggaccagggggtaaggggtgcccgtctggttgggtcctaaagtccggtgggccgatcacttttgattcgagatcgggagtcagttatttggc 47945768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 279
Target Start/End: Complemental strand, 1652971 - 1652855
Alignment:
Q  159 ctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttttggcttttgttttgtgc 258  Q
    |||||||||| || || ||| |||| |||||||||||||||| ||||||| |||| || |||||||   | ||||| | |||| ||||||  ||| |||     
T  1652971 ctgatttggtcctgaactcttgtgggccgatcacttttgattcgagatcaggagttagttctttgg--ttcaagtttggttttgggcttt--tttggtgt 1652876  T
Q  259 tctttcggtggatcggaggtt 279  Q
    |||||||||||| ||||||||    
T  1652875 tctttcggtggaccggaggtt 1652855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 45163554 - 45163596
Alignment:
Q  11 ctttgttacacgggtccatggtcgtcgtcgctagctcttgttt 53  Q
    |||||||||||||||||||| |||||||| ||| |||||||||    
T  45163554 ctttgttacacgggtccatgttcgtcgtctctaactcttgttt 45163596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 167
Target Start/End: Original strand, 47235686 - 47235720
Alignment:
Q  133 gtgtaccgggggcgaggggtgccctgctgatttgg 167  Q
    |||||||||||||||||||||||||||| ||||||    
T  47235686 gtgtaccgggggcgaggggtgccctgctaatttgg 47235720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 287
Target Start/End: Original strand, 47235729 - 47235819
Alignment:
Q  194 tttgatttgagatcaagagtcagctctttggcaattaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 287  Q
    ||||||| |||||| |||||| | |||||| |  |||||||||||||| |||||| || || ||||||||||||||||| ||||| | ||||||    
T  47235729 tttgattcgagatcgagagtcggttctttgac--ttaagttggtttttgggcttt-gtgttttgctctttcggtggatcagaggtcgcgaggtt 47235819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 431
Target Start/End: Complemental strand, 50305396 - 50305359
Alignment:
Q  394 gtgttttgtttctattaaggtgtccgtcttaggtggtg 431  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  50305396 gtgttttgtttctgttaaggtgttcgtcttaggtggtg 50305359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 4e-54; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 127 - 293
Target Start/End: Complemental strand, 15821496 - 15821332
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||  ||||||||||||||  |    
T  15821496 tctctggtgtaccgagggcgaggggtgccctgctgatttggttctaaagtctggtgggctgatcacttttgattcgagatcgggagtcagctctttg--a 15821399  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaa 293  Q
     ||| |||||||||| |||||||||||||||||||||| ||||||| ||||| ||||||||||||||    
T  15821398 cttatgttggtttttgggcttttgttttgtgctctttcagtggatcagaggtcgagaggttgtggaa 15821332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 131 - 301
Target Start/End: Original strand, 36630805 - 36630973
Alignment:
Q  131 tggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaatta 230  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||| ||||||  | ||||| ||||||  | |      
T  36630805 tggtgtaccgggggcgaggggtgccctgctaatttggttctaaagtctggtgggccgatcacttttaattcgagatcgggtgtcagttctttg--actct 36630902  T
Q  231 agttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatg 301  Q
    |||| |||||| ||||||||||||||||||||||| |||||||||||| | |||||||||| | |||||||    
T  36630903 agtttgtttttgggcttttgttttgtgctctttcgatggatcggaggtcgcgaggttgtgggagctgcatg 36630973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 127 - 287
Target Start/End: Complemental strand, 34389122 - 34388965
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    ||||||||||||| |||||||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||| ||||||||||||||| ||||||  |    
T  34389122 tctctggtgtaccaggggcgaggggtgccctgctaatttggtactatagtctggtgggccgatcacttttgattcgagatcaagagtcagttctttg--a 34389025  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 287  Q
     | |||||||||||| ||| ||||| ||||||| ||||||||||||| |||| | ||||||    
T  34389024 ctcaagttggtttttgggc-tttgtgttgtgctatttcggtggatcgtaggtcgtgaggtt 34388965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 127 - 287
Target Start/End: Complemental strand, 32066412 - 32066255
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    ||||| |||||||||||||||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||| || |||  ||||||||||||||  |    
T  32066412 tctctagtgtaccgggggcgaggggtgccctgctaatttggtgctatagtctggtgggccgatcacttttgattcgaaatcgggagtcagctctttg--a 32066315  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 287  Q
     |  ||||||||||| ||| ||||| ||||||||||||||||| || ||||||| ||||||    
T  32066314 ctccagttggtttttgggc-tttgtgttgtgctctttcggtggttcagaggttgcgaggtt 32066255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 127 - 280
Target Start/End: Original strand, 9519463 - 9519613
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    |||||||||||||||||| ||||||||||||||| ||||||| ||| ||||| |||| ||||||| |||||||| ||||||  ||||||| ||||||  |    
T  9519463 tctctggtgtaccgggggtgaggggtgccctgctaatttggtactatagtctagtgggccgatcagttttgattcgagatcgggagtcagttctttg--a 9519560  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttg 280  Q
     | |||||||||||| ||| ||||| ||||||||||||||||| ||||||||||    
T  9519561 ctcaagttggtttttgggc-tttgtgttgtgctctttcggtgggtcggaggttg 9519613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 127 - 287
Target Start/End: Complemental strand, 37986975 - 37986818
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    |||||||||||||||||||||||||||||||||| |||||||  || |||||||||| || |||| |||||||| ||||||  ||||||| ||||||  |    
T  37986975 tctctggtgtaccgggggcgaggggtgccctgctaatttggtgttatagtctggtgggccaatcatttttgattcgagatcgggagtcagttctttg--a 37986878  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 287  Q
     | ||||||||||||  || ||||| ||||||||||||||||| |||||||| | ||||||    
T  37986877 ctcaagttggtttttgtgc-tttgtgttgtgctctttcggtggttcggaggtcgcgaggtt 37986818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 127 - 287
Target Start/End: Complemental strand, 24995512 - 24995355
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    |||||||||||| |||||||||||||| | |||| ||||||| ||| |||||||||| |||||||||||||||| ||||||  ||||||| ||||||  |    
T  24995512 tctctggtgtactgggggcgaggggtgtcttgctaatttggtactatagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttg--a 24995415  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 287  Q
     | |||||||||||| ||| ||||| |||||||||||| |||| || ||||| | ||||||    
T  24995414 ctcaagttggtttttgggc-tttgtgttgtgctctttcagtgggtcagaggtcgcgaggtt 24995355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 127 - 287
Target Start/End: Complemental strand, 31207478 - 31207322
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    ||||||||||||| |||||||||| ||||||||| ||||||| ||| |||||||||| |||||||||||||||| ||||||  ||||||| ||||||  |    
T  31207478 tctctggtgtaccaggggcgaggg-tgccctgctaatttggtactatagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttg--a 31207382  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 287  Q
     | |||||||  ||||||  ||||| ||||||| |||||||||||||||||| | ||||||    
T  31207381 ctcaagttgg-attttgggatttgtgttgtgctttttcggtggatcggaggtcgcgaggtt 31207322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 228 - 302
Target Start/End: Complemental strand, 38577808 - 38577734
Alignment:
Q  228 ttaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatgt 302  Q
    |||||||||||||| | |||||||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||    
T  38577808 ttaagttggtttttggacttttgttttgtgctctttcggtggatcagaggtcgagagtttgtggaagctgcatgt 38577734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 374 - 435
Target Start/End: Complemental strand, 38577628 - 38577567
Alignment:
Q  374 ttgtggatactgtgttttcagtgttttgtttctattaaggtgtccgtcttaggtggtgatgt 435  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||    
T  38577628 ttgtggatactgtgtttacagtgttttgtttatatttaggtgtccgtcttaggtggtgatgt 38577567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 185 - 287
Target Start/End: Original strand, 20138448 - 20138547
Alignment:
Q  185 ccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagag 284  Q
    |||||||||||||||||||||||  ||||||| |||||| |  ||| |||||||||| |||||| || |||||||||||||||||||||||||| | |||    
T  20138448 ccgatcacttttgatttgagatcgggagtcagttctttgac--ttatgttggtttttgggcttt-gtgttgtgctctttcggtggatcggaggtcgcgag 20138544  T

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Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 10248670 - 10248572
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 225  Q
    |||||||||||||||||| |||||||| ||| || |||| || ||||| | |||||||||||||||||||||||  |||||  ||||||| ||||||||    
T  10248670 tctctggtgtaccgggggtgaggggtgtccttctaattttgtcctaaaatttggtggaccgatcacttttgattcaagatcgggagtcagttctttggc 10248572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 142 - 275
Target Start/End: Complemental strand, 16457562 - 16457433
Alignment:
Q  142 gggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttt 241  Q
    |||||||||||| |||||| ||||| | ||| ||| |||||| |||||||||||||||| ||||||  ||||||| ||||||  | | ||||||||||||    
T  16457562 gggcgaggggtgtcctgctaatttgatactatagtttggtgg-ccgatcacttttgattcgagatcgggagtcagttctttg--actcaagttggttttt 16457466  T
Q  242 tggcttttgttttgtgctctttcggtggatcgga 275  Q
     ||| ||||| ||||||||||||||||| |||||    
T  16457465 aggc-tttgtgttgtgctctttcggtggttcgga 16457433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 127 - 224
Target Start/End: Complemental strand, 30236245 - 30236148
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 224  Q
    ||||||||| ||||||||  ||||||||||| ||||||||||| | |||||||||||  ||||| ||||||||| ||||||  ||||||| |||||||    
T  30236245 tctctggtggaccgggggtaaggggtgcccttctgatttggttttgaagtctggtgggacgatcgcttttgattcgagatcgggagtcagttctttgg 30236148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 434
Target Start/End: Complemental strand, 35816128 - 35816026
Alignment:
Q  332 ttttgagggttgctctttggaggtaagtagcgacgatgagtg-ttgtggatactgtgttttcagtgttttgtttctattaaggtgtccgtcttaggtggt 430  Q
    ||||||||| || ||||||| ||| ||||| || |||| ||| ||||||||||||||||| || || ||||||||| |||||||||| |||||| |||||    
T  35816128 ttttgaggggtgttctttgggggtgagtagtgatgatgggtggttgtggatactgtgtttacaatg-tttgtttctgttaaggtgtctgtcttaagtggt 35816030  T
Q  431 gatg 434  Q
    ||||    
T  35816029 gatg 35816026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 302
Target Start/End: Complemental strand, 35816238 - 35816187
Alignment:
Q  251 ttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatgt 302  Q
    ||||||||||||| |||||||||||||||||||| |||||||| ||||||||    
T  35816238 ttttgtgctcttttggtggatcggaggttgagagattgtggaagctgcatgt 35816187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 299 - 435
Target Start/End: Complemental strand, 15821299 - 15821157
Alignment:
Q  299 atgtggctcagcttgggtgttgaagtatg-----tttattttgagggttgctctttggaggtaagtagcgacgatgagtg-ttgtggatactgtgttttc 392  Q
    ||||||||||||| || ||||||||| ||     ||||||||||||  || ||||| |  || ||||| | ||||||||| ||||||||  ||||||| |    
T  15821299 atgtggctcagctcggatgttgaagtctgggagttttattttgaggagtgttcttttggagtgagtagtggcgatgagtggttgtggattttgtgtttac 15821200  T
Q  393 agtgttttgtttctattaaggtgtccgtcttaggtggtgatgt 435  Q
      |||||||||||| |||||||||| |||||||||||||||||    
T  15821199 cttgttttgtttctgttaaggtgtctgtcttaggtggtgatgt 15821157  T

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Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 200
Target Start/End: Original strand, 10552233 - 10552305
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatt 200  Q
    ||||||||  ||| ||||| ||||||||||| ||||||||||||| ||||||||||| |||||| |||||||||    
T  10552233 tctctggtagaccaggggcaaggggtgccct-ctgatttggttctgaagtctggtgggccgatcgcttttgatt 10552305  T

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Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 10248924 - 10248845
Alignment:
Q  14 tgttacacgggtccatggtcgtcgtcgctagctcttgtttca--tttttgggttgttaaggtgtttagggtgtttggagg 91  Q
    |||||| ||||||| |  |||||||| ||||||||||||| |  ||||||| ||||||||||||||| ||||||||||||    
T  10248924 tgttactcgggtccttattcgtcgtcactagctcttgtttgagttttttggattgttaaggtgtttaaggtgtttggagg 10248845  T

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Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 159 - 216
Target Start/End: Original strand, 35062453 - 35062510
Alignment:
Q  159 ctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcag 216  Q
    ||||||||||||| ||||||||||| ||||||  |||||||| |||||| ||||||||    
T  35062453 ctgatttggttctgaagtctggtgggccgatcgattttgattcgagatcgagagtcag 35062510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 12898378 - 12898302
Alignment:
Q  140 gggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcag 216  Q
    ||||||||||||||||||  | |||||||  || |||||||||  |||||||||||||||| ||||||  |||||||    
T  12898378 gggggcgaggggtgccctattaatttggtaatatagtctggtgacccgatcacttttgattcgagatccggagtcag 12898302  T

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Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 18690160 - 18690228
Alignment:
Q  33 cgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 101  Q
    ||||||||||||||||||||| | | |||| |||||||||||||| ||||| || |||  |||||||||    
T  18690160 cgtcgtcgctagctcttgtttgagtattggattgttaaggtgttttgggtgctttgagcgtgcgtgtcc 18690228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 225
Target Start/End: Complemental strand, 17657100 - 17657021
Alignment:
Q  146 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 225  Q
    |||||||||||| || | ||||  ||||||| ||||||  ||||||||||||||| ||||||  ||||||| ||||||||    
T  17657100 gaggggtgcccttctaagttggacctaaagtatggtgggtcgatcacttttgattcgagatcgggagtcagttctttggc 17657021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 34389350 - 34389311
Alignment:
Q  14 tgttacacgggtccatggtcgtcgtcgctagctcttgttt 53  Q
    ||||||||||||||||| |||||||| |||||||||||||    
T  34389350 tgttacacgggtccatgttcgtcgtcactagctcttgttt 34389311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 15906686 - 15906747
Alignment:
Q  163 tttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 224  Q
    |||||| || ||||||||||| |||||||| ||||||| ||||||  ||||||| |||||||    
T  15906686 tttggtcctgaagtctggtgggccgatcacatttgattcgagatcgggagtcagttctttgg 15906747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 17657350 - 17657297
Alignment:
Q  41 ctagctcttgttt-catttttgggt-tgttaaggtgtttagggtgtttggagga 92  Q
    ||||||||||||| ||||||||||  |||||||||||||| |||||||||||||    
T  17657350 ctagctcttgtttgcatttttgggactgttaaggtgtttatggtgtttggagga 17657297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 30236446 - 30236377
Alignment:
Q  32 tcgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 101  Q
    |||| ||||||||||||| ||| | || |||||||| |||||||||||||| ||| |||| || ||||||    
T  30236446 tcgttgtcgctagctcttatttgagttgtgggttgtcaaggtgtttagggtattttgagggtgtgtgtcc 30236377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 37987233 - 37987114
Alignment:
Q  12 tttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcg- 107  Q
    ||||||||| |||| |||| |||||||| ||||||||||||  |  |||| |||| ||| ||||||||| || ||| ||||| |||||||| ||||| |     
T  37987233 tttgttacatgggtacatgttcgtcgtcactagctcttgtttgtgtttttcgggtggtttaggtgtttacggagttaggagggtgcgtgtcacgttgtgt 37987134  T
Q  108 atgagccttttccttttgat 127  Q
     ||||||||||| |||||||    
T  37987133 ttgagccttttctttttgat 37987114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 1e-51; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 127 - 293
Target Start/End: Original strand, 7874255 - 7874419
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    ||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||  ||||||||||||||  |    
T  7874255 tctctagtgtaccgagggcgatgggtgccctgctgatttggttctaaagtctggtgggtcgatcacttttgattcgagatcgggagtcagctctttg--a 7874352  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaa 293  Q
     | |||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  7874353 ctcaagttggtttttgggcttttgttttgtgctcattcggtggatcggaggtcgagaggttgtggaa 7874419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 127 - 299
Target Start/End: Original strand, 14405163 - 14405332
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||||||||||| |||||||||||||||| ||||||  ||||||||||||||||     
T  14405163 tctctggtgtaccgggggcgaggggtgct-tgatgatttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagtcagctctttggc- 14405260  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgca 299  Q
     | |||||||||||| |||||||||||||||||||||||||||||| || || ||| |||||||||| |||||    
T  14405261 -tcaagttggtttttgggcttttgttttgtgctctttcggtggatcagaagtcgagtggttgtggaaactgca 14405332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 131 - 287
Target Start/End: Complemental strand, 39338978 - 39338825
Alignment:
Q  131 tggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaatta 230  Q
    |||||||||||||||||||||||||||||| ||||||| ||| |||||||||| |||||| ||||||||| ||||||  ||||||| ||||||  | | |    
T  39338978 tggtgtaccgggggcgaggggtgccctgctaatttggtactatagtctggtgggccgatcgcttttgattcgagatcgggagtcagttctttg--actca 39338881  T
Q  231 agttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 287  Q
    ||||||||||| ||| ||||| |||||||||||||||||||||||||| | ||||||    
T  39338880 agttggtttttgggc-tttgtgttgtgctctttcggtggatcggaggtcgcgaggtt 39338825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 142 - 293
Target Start/End: Complemental strand, 14106626 - 14106475
Alignment:
Q  142 gggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg--caattaagttggttt 239  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||  |||||  ||||||||||||| |  || ||   |||||||    
T  14106626 gggcgaggggtgccctgctgatttggtcctaaagtctggtgggccgatcacttttgattcaagatcgggagtcagctctttagatcagtt---ttggttt 14106530  T
Q  240 tttggcttttg-ttttgtgctctttcggtggatcggaggttgagaggttgtggaa 293  Q
    || || ||||| |||||||||||||||||||||| ||||| ||||||||||||||    
T  14106529 ttgggtttttgtttttgtgctctttcggtggatcagaggtcgagaggttgtggaa 14106475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 167 - 302
Target Start/End: Original strand, 5254260 - 5254393
Alignment:
Q  167 gttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttttggcttttgttttgtgctctttcgg 266  Q
    |||||||||||| |||| |||||||||||| ||||||||||  ||||| |||||||||   | |||||||||||  ||||||||||||||||| ||||||    
T  5254260 gttctaaagtctagtgggccgatcacttttaatttgagatcgggagtctgctctttggt--tcaagttggttttcgggcttttgttttgtgctttttcgg 5254357  T
Q  267 tggatcggaggttgagaggttgtggaacctgcatgt 302  Q
    |||||||||||| |||||||||||||| ||||||||    
T  5254358 tggatcggaggtcgagaggttgtggaagctgcatgt 5254393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 141 - 302
Target Start/End: Original strand, 387151 - 387311
Alignment:
Q  141 ggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggtttt 240  Q
    |||||||||||||||||||| ||||||| |||||||||||||| | |||||||||||||||||||||  ||||||  ||||||  | | |||||||||||    
T  387151 ggggcgaggggtgccctgctaatttggtactaaagtctggtgggctgatcacttttgatttgagatcgggagtcaattctttg--actcaagttggtttt 387248  T
Q  241 ttggcttttg-ttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatgt 302  Q
    |  ||||||| ||||||||||||| ||||||||||||||   |||||| ||||| ||||||||    
T  387249 tgagcttttgtttttgtgctcttttggtggatcggaggtcacgaggttttggaagctgcatgt 387311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 299 - 431
Target Start/End: Complemental strand, 14106442 - 14106305
Alignment:
Q  299 atgtggctcagcttgggtgttgaagtatg-----tttattttgagggttgctctttggaggtaagtagcgacgatgagtg-ttgtggatactgtgttttc 392  Q
    |||||||||||||||||||||||||| ||     ||||||||||||| || ||||||| ||| ||||| ||||||||||| ||||||||||||||||| |    
T  14106442 atgtggctcagcttgggtgttgaagtctgagagttttattttgaggggtgttctttgggggtgagtagtgacgatgagtggttgtggatactgtgtttac 14106343  T
Q  393 agtgttttgtttctattaaggtgtccgtcttaggtggtg 431  Q
    | ||||| |||||| ||||||||||||||||||||||||    
T  14106342 aatgttt-gtttctgttaaggtgtccgtcttaggtggtg 14106305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 431
Target Start/End: Original strand, 7460837 - 7460974
Alignment:
Q  299 atgtggctcagcttgggtgttgaagtatg-----tttattttgagggttgctctttggaggtaagtagcgacgatgagtg-ttgtggatactgtgttttc 392  Q
    |||||||||||||||||||||||||| ||     ||||||||||||| || ||||||| | | ||||| ||||||| ||| ||||||||| ||||||| |    
T  7460837 atgtggctcagcttgggtgttgaagtctgggagttttattttgaggggtgttctttggggttgagtagtgacgatgtgtggttgtggatattgtgtttac 7460936  T
Q  393 agtgttttgtttctattaaggtgtccgtcttaggtggtg 431  Q
    ||||||| |||||| ||||||||||||||||||| ||||    
T  7460937 agtgttt-gtttctgttaaggtgtccgtcttaggcggtg 7460974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 299 - 435
Target Start/End: Original strand, 5254417 - 5254553
Alignment:
Q  299 atgtggctcagcttgggtgttgaagtatgtt--tattttgagggttgctctttggaggtaagtagcgacgatgagtg-ttgtggatactgtgttttcagt 395  Q
    ||||||||||| |||||||||||||| ||    | ||||||||| || |||||||  || ||||| ||||||| ||| ||||||||||||||||| ||||    
T  5254417 atgtggctcagtttgggtgttgaagtctgagagttttttgaggggtgttctttgg--gtgagtagtgacgatgggtggttgtggatactgtgtttacagt 5254514  T
Q  396 gttttgtttctattaaggtgtccgtcttaggtggtgatgt 435  Q
    |||| |||||| ||||||||||||||||||||||||||||    
T  5254515 gttt-gtttctgttaaggtgtccgtcttaggtggtgatgt 5254553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 17105107 - 17105236
Alignment:
Q  1 tggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt-ca-tttttgggttgttaaggtgtttagggtgtttggaggatgcgtg 98  Q
    ||||| |||||| || ||||| |||||||| |||||||| ||||||||| ||| || ||||| || |||||||||||||||||||||| |||| ||| ||    
T  17105107 tggaggcagcctctgctacacaggtccatgttcgtcgtcactagctcttatttgcacttttttggctgttaaggtgtttagggtgtttagagggtgcttg 17105206  T
Q  99 t-ccgttgcgatgagccttttccttttgat 127  Q
    | |||||| |||||||||||||||||||||    
T  17105207 tcccgttgtgatgagccttttccttttgat 17105236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 299 - 428
Target Start/End: Original strand, 7874452 - 7874585
Alignment:
Q  299 atgtggctcagcttgggtgttgaagtatg-----tttattttgagggttgctctttggaggtaagtagcgacgatgagtg-ttgtggatactgtgttttc 392  Q
    |||||||||||||||||||||||||| |      ||||||||||||| || ||||||| ||| ||||| ||||||| ||| ||||||||||||||||| |    
T  7874452 atgtggctcagcttgggtgttgaagtcttggagttttattttgagggatgttctttgg-ggtgagtagtgacgatgggtggttgtggatactgtgtttac 7874550  T
Q  393 agtgttttgtttctattaaggtgtccgtcttaggtg 428  Q
    |||| ||||||||| | |||||||||||||||||||    
T  7874551 agtg-tttgtttctgtcaaggtgtccgtcttaggtg 7874585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 207
Target Start/End: Original strand, 10524061 - 10524141
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 207  Q
    |||||||| ||| ||||||||| ||||||||||  ||||||| ||| |||||||||| |||||||||||||||| ||||||    
T  10524061 tctctggtctactgggggcgagaggtgccctgccaatttggtgctatagtctggtgggccgatcacttttgattcgagatc 10524141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 146 - 225
Target Start/End: Original strand, 1269466 - 1269545
Alignment:
Q  146 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 225  Q
    |||||||||||| ||||||| || |||||||||||||| |||||||||||||||| ||||||   |||||| ||||||||    
T  1269466 gaggggtgcccttctgatttagtcctaaagtctggtgggccgatcacttttgattcgagatcggaagtcagttctttggc 1269545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 37770758 - 37770685
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatt 200  Q
    |||||||||||||| ||| |||||||||||  |||||||||| |||| || |||||| ||||||||||||||||    
T  37770758 tctctggtgtaccgagggtgaggggtgcccatctgatttggtcctaaggtttggtgggccgatcacttttgatt 37770685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 127
Target Start/End: Complemental strand, 39339237 - 39339121
Alignment:
Q  14 tgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcgatg 110  Q
    ||||||||||||||||| |||||||  ||||||||||||  |  ||||||||| ||| ||||||||| |  ||||||||| || ||||| ||||| | ||    
T  39339237 tgttacacgggtccatgttcgtcgttactagctcttgtttgtgctttttgggtggtttaggtgtttacgaagtttggagggtgtgtgtcacgttgtgttg 39339138  T
Q  111 agccttttccttttgat 127  Q
    |||||||||||||||||    
T  39339137 agccttttccttttgat 39339121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 127 - 293
Target Start/End: Complemental strand, 10173695 - 10173532
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    ||||||||||||| | || || |||||| ||  || |||||| ||||||||| |||| |||||||||||||||| ||||||   ||| || | ||||||     
T  10173695 tctctggtgtaccagaggtgaagggtgctcttttgttttggtcctaaagtctagtgggccgatcacttttgattcgagatcggaagtaagttatttggc- 10173597  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaa 293  Q
     | ||||| | |||| |||||||| || ||| |||||||||| ||||||||| ||||||| ||||||    
T  10173596 -tcaagtttggttttgggcttttg-ttggtgttctttcggtgaatcggaggtcgagaggtggtggaa 10173532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 17105379 - 17105470
Alignment:
Q  131 tggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcac-ttttgatttgagatcaagagtcagctctt 221  Q
    ||||||||| |||| |||||||||||| |||||||||| || ||||||| ||| |||||||| |||||||| |||||| ||| |||| ||||    
T  17105379 tggtgtaccaggggtgaggggtgccctactgatttggtactgaagtctgatgggccgatcactttttgattcgagatcgagaatcagatctt 17105470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 22885481 - 22885412
Alignment:
Q  32 tcgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 101  Q
    |||||||||||| ||||||||| | ||| |||||| ||||||||||| |||| ||||||| |||||||||    
T  22885481 tcgtcgtcgctacctcttgtttgagtttcgggttgctaaggtgtttaaggtgattggagggtgcgtgtcc 22885412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 16959989 - 16960044
Alignment:
Q  170 ctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 225  Q
    |||||||||||||| |||||| ||||||||| |||||| |||||||| ||||||||    
T  16959989 ctaaagtctggtgggccgatcgcttttgattcgagatcgagagtcagttctttggc 16960044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 293
Target Start/End: Complemental strand, 22885229 - 22885088
Alignment:
Q  147 aggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttttggct 246  Q
    |||||||||| |||| |||| | || ||||||||||| |||||||||||||||| ||||||  ||||||| |||||||   | ||||| | |||| ||      
T  22885229 aggggtgccc-gctggtttgatcctgaagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttgg--ttcaagtttggttttggg-- 22885135  T
Q  247 tttgtttt-gtgctctttcggtggatcggaggttgagaggttgtggaa 293  Q
     ||||||| ||| |||||||||||| | ||||||||||||| ||||||    
T  22885134 -ttgttttggtgttctttcggtggaccagaggttgagaggtggtggaa 22885088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 9560886 - 9560825
Alignment:
Q  146 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 207  Q
    |||||||||| || |||||||  || ||||| ||||||||||||||||||||||| ||||||    
T  9560886 gaggggtgccttgatgatttgtgtcgaaagtttggtggaccgatcacttttgattcgagatc 9560825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 208
Target Start/End: Complemental strand, 41086904 - 41086824
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatca 208  Q
    ||||||||||||| |||| ||||| |||||| ||||||||||  || ||||||||||  | ||||||||||||| |||||||    
T  41086904 tctctggtgtaccaggggtgaggg-tgcccttctgatttggtcatatagtctggtgggtcaatcacttttgattcgagatca 41086824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 41087172 - 41087040
Alignment:
Q  1 tggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgt-ttcattttt--gggttgttaaggtgtttagggtgtttggaggatgcgt 97  Q
    ||||| |||||| |||||| ||||||| |  |||||||  ||||||||||| | | |||||  ||||||||||||||| |||||||||||||||  |||     
T  41087172 tggagtcagcctctgttactcgggtccttattcgtcgttactagctcttgtatgcgttttttggggttgttaaggtgtctagggtgtttggaggtagcgg 41087073  T
Q  98 gt-ccgttgcgatgagccttttccttttgatct 129  Q
    || |||||| | | ||||||||||| |||||||    
T  41087072 gtcccgttgagctaagccttttcctattgatct 41087040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 293
Target Start/End: Original strand, 2062901 - 2063015
Alignment:
Q  175 gtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttttggcttttgttttgtgctctttcggtggatcgg 274  Q
    ||||||||| |||||  ||||||||| ||||||  ||||||||||||||||  | ||||| | |||| ||||||  ||| ||| |||||||||| | | |    
T  2062901 gtctggtgggccgattgcttttgattcgagatcgggagtcagctctttggc--tcaagtttggttttgggcttt--tttggtgttctttcggtgtaccag 2062996  T
Q  275 aggttgagaggttgtggaa 293  Q
    |||||| ||||||||||||    
T  2062997 aggttgtgaggttgtggaa 2063015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 15710437 - 15710505
Alignment:
Q  33 cgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 101  Q
    ||||||||||||||||||||| | | |||| |||||||||||||| |||||  | ||| ||||||||||    
T  15710437 cgtcgtcgctagctcttgtttgagtattggattgttaaggtgttttgggtgccttgagcatgcgtgtcc 15710505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 15722900 - 15722968
Alignment:
Q  33 cgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 101  Q
    ||||||||||||||||||||| | | |||| |||||||||||||| ||||| || |||  |||||||||    
T  15722900 cgtcgtcgctagctcttgtttgagtattggattgttaaggtgttttgggtgctttgagcgtgcgtgtcc 15722968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 293
Target Start/End: Original strand, 34230209 - 34230327
Alignment:
Q  171 taaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttttggcttttgttttgtgctctttcggtgga 270  Q
    |||||| || ||| ||||||| |||| ||| ||||||| ||||||| |||||||  || ||||| | |||| |||||||  | ||   ||||||||||||    
T  34230209 taaagtttgatgggccgatcattttttattcgagatcaggagtcagttctttgg--atcaagtttgattttgggctttt--tgtggtttctttcggtgga 34230304  T
Q  271 tcggaggttgagaggttgtggaa 293  Q
    |||||||||||||||| ||||||    
T  34230305 tcggaggttgagaggtggtggaa 34230327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 208
Target Start/End: Original strand, 8520385 - 8520447
Alignment:
Q  146 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatca 208  Q
    |||||||||| |  ||||||| ||||| |||||| |||||| ||||||||||||| |||||||    
T  8520385 gaggggtgccttagtgatttgtttctagagtctgatggaccaatcacttttgattcgagatca 8520447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 293
Target Start/End: Complemental strand, 16952371 - 16952337
Alignment:
Q  259 tctttcggtggatcggaggttgagaggttgtggaa 293  Q
    |||||||||||||||||||||||||||| ||||||    
T  16952371 tctttcggtggatcggaggttgagaggtggtggaa 16952337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 293
Target Start/End: Complemental strand, 17023036 - 17023002
Alignment:
Q  259 tctttcggtggatcggaggttgagaggttgtggaa 293  Q
    |||||||||||||||||||||||||||| ||||||    
T  17023036 tctttcggtggatcggaggttgagaggtggtggaa 17023002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 293
Target Start/End: Complemental strand, 17060342 - 17060308
Alignment:
Q  259 tctttcggtggatcggaggttgagaggttgtggaa 293  Q
    |||||||||||||||||||||||||||| ||||||    
T  17060342 tctttcggtggatcggaggttgagaggtggtggaa 17060308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 25505258 - 25505196
Alignment:
Q  21 cgggtccatggtcgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtg 83  Q
    |||||||||  |||| | ||||| ||||||||| | ||||| |||||||||||||||||||||    
T  25505258 cgggtccattttcgttgacgctacctcttgtttgagttttgagttgttaaggtgtttagggtg 25505196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 1269209 - 1269270
Alignment:
Q  32 tcgtcgtcgctagctcttgttt-catttttggg-ttgttaaggtgtttagggtgtttggagg 91  Q
    |||||||| ||||||||||||| | |||||||| ||||||| ||||||| ||||||||||||    
T  1269209 tcgtcgtcactagctcttgtttgcgtttttggggttgttaaagtgtttatggtgtttggagg 1269270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 27739939 - 27740028
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcag 216  Q
    ||||||||| || |||||  ||||||||||  |||  ||||| || ||||||||||| |||||| |||||||||  ||||| ||||||||    
T  27739939 tctctggtggactgggggttaggggtgcccatctggattggtcctgaagtctggtgggccgatcgcttttgattcaagatcgagagtcag 27740028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 10523819 - 10523922
Alignment:
Q  27 catggtcgtcgtcgctagctcttgtt--tcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcgatgagccttttccttt 123  Q
    |||| |||||||| ||||||||||||  |  |||| |||| ||| ||||||||| || ||||| ||| |||||||| ||||| | ||||||||||| |||    
T  10523819 catgttcgtcgtcactagctcttgtttgtgcttttcgggtggtttaggtgtttacggagtttgtagggtgcgtgtcacgttgtgttgagccttttctttt 10523918  T
Q  124 tgat 127  Q
    ||||    
T  10523919 tgat 10523922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 75
Target Start/End: Complemental strand, 16952725 - 16952681
Alignment:
Q  32 tcgtcgtcgctagctcttgttt-catttttgggttgttaaggtgt 75  Q
    |||||||| ||||||||| ||| ||||||||||||||||||||||    
T  16952725 tcgtcgtcactagctcttatttgcatttttgggttgttaaggtgt 16952681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 75
Target Start/End: Complemental strand, 17023390 - 17023346
Alignment:
Q  32 tcgtcgtcgctagctcttgttt-catttttgggttgttaaggtgt 75  Q
    |||||||| ||||||||| ||| ||||||||||||||||||||||    
T  17023390 tcgtcgtcactagctcttatttgcatttttgggttgttaaggtgt 17023346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 75
Target Start/End: Complemental strand, 17060696 - 17060652
Alignment:
Q  32 tcgtcgtcgctagctcttgttt-catttttgggttgttaaggtgt 75  Q
    |||||||| ||||||||| ||| ||||||||||||||||||||||    
T  17060696 tcgtcgtcactagctcttatttgcatttttgggttgttaaggtgt 17060652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 3e-46; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 134 - 302
Target Start/End: Complemental strand, 31050772 - 31050605
Alignment:
Q  134 tgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagt 233  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||   ||| || |||||||   || |||    
T  31050772 tgtaccgggggcgaggggtgccctactgatttggttctaaagtctggtgggccgatcacttttgattcgagatcggaagttaggtctttgg--tttgagt 31050675  T
Q  234 tggttttttggcttttg-ttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatgt 302  Q
    |||||||| |||||||| |||||||||||||| ||||||||||||| |||||||||||||| ||||||||    
T  31050674 tggtttttgggcttttgtttttgtgctctttcagtggatcggaggtcgagaggttgtggaagctgcatgt 31050605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 127 - 287
Target Start/End: Original strand, 8254991 - 8255148
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||  |||||||  |||||| ||||||  |    
T  8254991 tctctggtgtaccgggggcgaggggtgccctgctaatttggtactaaagtctggtgggccgatcacttttgatccgagatcagaagtcagttctttg--a 8255088  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 287  Q
     | |||||||||||| ||| |||||||||||||||||||||||||||||||| | ||||||    
T  8255089 ctcaagttggtttttgggc-tttgttttgtgctctttcggtggatcggaggtcgcgaggtt 8255148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 127 - 287
Target Start/End: Original strand, 8268409 - 8268566
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||  |||||||  |||||| ||||||  |    
T  8268409 tctctggtgtaccgggggcgaggggtgccctgctaatttggtactaaagtctggtgggccgatcacttttgatccgagatcagaagtcagttctttg--a 8268506  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 287  Q
     | |||||||||||| ||| |||||||||||||||||||||||||||||||| | ||||||    
T  8268507 ctcaagttggtttttgggc-tttgttttgtgctctttcggtggatcggaggtcgcgaggtt 8268566  T

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Target: chr4; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 127 - 302
Target Start/End: Original strand, 2825747 - 2825920
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||| ||||||| |||||||| ||||||  || ||| |||||||||     
T  2825747 tctctggtgtaccgagggcgaggggtgctctgctgatttggttctaaagtccggtgggccgatcatttttgattcgagatcgggaatcacctctttggc- 2825845  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatgt 302  Q
     | ||  |||||||| ||||||| |||||| |||||||||||||||||||||  ||||||||||||| ||||||||    
T  2825846 -tcaatgtggtttttgggcttttattttgtactctttcggtggatcggaggtctagaggttgtggaagctgcatgt 2825920  T

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Target: chr4; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 53823538 - 53823440
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 225  Q
    ||||||||||||||| || |||||||||||| ||||||||||  |||||||||||||||| ||||||||||||| ||||||  ||||||| ||||||||    
T  53823538 tctctggtgtaccggaggtgaggggtgcccttctgatttggtcataaagtctggtggaccaatcacttttgattcgagatcgggagtcagttctttggc 53823440  T

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Target: chr4; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 127 - 287
Target Start/End: Original strand, 30964405 - 30964562
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    |||||||||||||| ||||||||||||||||||| ||||||| ||| | |||| ||| |||||||||||||||| | ||||  ||||| | ||||||  |    
T  30964405 tctctggtgtaccgagggcgaggggtgccctgctaatttggtactataatctgatgggccgatcacttttgattcgtgatcgggagtccgttctttg--a 30964502  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 287  Q
     | ||||||| ||||||| |||||| ||||||||||| ||||| |||||||| | ||||||    
T  30964503 ctcaagttgg-tttttgggttttgtgttgtgctcttttggtggttcggaggtcgcgaggtt 30964562  T

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Target: chr4; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 211 - 302
Target Start/End: Complemental strand, 35341371 - 35341282
Alignment:
Q  211 agtcagctctttggcaattaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatgt 302  Q
    |||||||||||||||  | |||||||||||| | |||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||    
T  35341371 agtcagctctttggc--tcaagttggtttttggccttttgttttgtgctctttcggtggatcggagttcgagaggttgtggaagctgcatgt 35341282  T

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Target: chr4; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 127 - 269
Target Start/End: Original strand, 4305689 - 4305828
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    ||||||||||||||||||| || ||||||||||| ||||||| ||| ||||||||||  ||||||||||||||| ||||||  |||| || |||||| |     
T  4305689 tctctggtgtaccgggggcaagcggtgccctgctaatttggtactatagtctggtggggcgatcacttttgattcgagatcgggagttagttctttgtc- 4305787  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtgg 269  Q
     | |||||||||||| ||| ||||| ||||||||||| |||||    
T  4305788 -tcaagttggtttttaggc-tttgtgttgtgctcttttggtgg 4305828  T

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Target: chr4; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 137 - 225
Target Start/End: Complemental strand, 19815331 - 19815243
Alignment:
Q  137 accgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 225  Q
    |||||||| |||||||||||| ||| |||||| |||||||||||||||||||| |||||| ||| ||||||| ||||||| ||||||||    
T  19815331 accgggggtgaggggtgcccttctgttttggtcctaaagtctggtggaccgattactttttattcgagatcaggagtcagttctttggc 19815243  T

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Target: chr4; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 127 - 278
Target Start/End: Original strand, 25753136 - 25753283
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    ||||||||||||||| || |||| ||||||  || ||||||| ||||||||||||||  ||||||||||||||| ||||||  ||||||| ||||||||     
T  25753136 tctctggtgtaccggaggtgaggagtgcccgtcttatttggtcctaaagtctggtggggcgatcacttttgattcgagatcgggagtcagttctttggc- 25753234  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 278  Q
     | ||||| | |||| ||||||| | ||||  ||||||||||||||||||||    
T  25753235 -tcaagtttgattttgggctttt-tattgt-ttctttcggtggatcggaggt 25753283  T

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Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 38929791 - 38929889
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 225  Q
    ||||||||| ||||||||  ||||||||||  ||| || ||| || ||||||| ||| |||||||||||||||| ||||||||||||||| ||||||||    
T  38929791 tctctggtggaccgggggtaaggggtgcccgtctggttgggtcctgaagtctgctgggccgatcacttttgattcgagatcaagagtcagttctttggc 38929889  T

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Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 49747524 - 49747586
Alignment:
Q  160 tgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctcttt 222  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||| |||||||| |||||    
T  49747524 tgatttggttctaaagtctggtgagccgatcacttttgatttgagatcgagagtcagttcttt 49747586  T

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Target: chr4; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 127
Target Start/End: Original strand, 8254732 - 8254852
Alignment:
Q  10 cctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgc 106  Q
    ||||||||||||||||||||| |||||||| ||||||||||||  | ||| |||||| ||| |||||||||  | ||||| ||| |||||||| | |||     
T  8254732 cctttgttacacgggtccatgttcgtcgtcactagctcttgtttgtgattgttgggtggtttaggtgtttaccgagtttgaagggtgcgtgtcgctttgt 8254831  T
Q  107 gatgagccttttccttttgat 127  Q
    | |||||||||||||||||||    
T  8254832 gttgagccttttccttttgat 8254852  T

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Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 127
Target Start/End: Original strand, 8268150 - 8268270
Alignment:
Q  10 cctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgc 106  Q
    ||||||||||||||||||||| |||||||| ||||||||||||  | ||| |||||| ||| |||||||||  | ||||| ||| |||||||| | |||     
T  8268150 cctttgttacacgggtccatgttcgtcgtcactagctcttgtttgtgattgttgggtggtttaggtgtttaccgagtttgaagggtgcgtgtcgctttgt 8268249  T
Q  107 gatgagccttttccttttgat 127  Q
    | |||||||||||||||||||    
T  8268250 gttgagccttttccttttgat 8268270  T

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Target: chr4; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 19672812 - 19672927
Alignment:
Q  15 gttacacgggtccatggtcgtcgtcgctagctcttgtt-tcatttttgggttgttaaggtgtttaggg-tgtttggaggatgcgtgtc-cgttgcgatga 111  Q
    ||||||||| |||||| |||||| | ||||||||||||    ||||||||||||||||||||||||||   ||||| || |||||||| ||||| |||||    
T  19672812 gttacacggatccatgttcgtcgccactagctcttgttggtgtttttgggttgttaaggtgtttagggaattttggggggtgcgtgtctcgttgagatga 19672911  T
Q  112 gccttttccttttgat 127  Q
    ||||||||||||||||    
T  19672912 gccttttccttttgat 19672927  T

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Target: chr4; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 31051046 - 31050917
Alignment:
Q  1 tggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcatttttgggttg-ttaaggtgtttagggtg-tttggaggatgcg 96  Q
    ||||| |||||| || |||||||||||| | |||||||| ||||||||||||  || ||||||||||| ||||||||||||||| | |||||||| ||||    
T  31051046 tggaggcagcctctggtacacgggtccacgttcgtcgtcactagctcttgttggtc-tttttgggttgtttaaggtgtttagggagttttggagggtgcg 31050948  T
Q  97 tgtccgttgcgatgagccttttccttttgat 127  Q
    |  |||||| |||||| || |||||||||||    
T  31050947 ttcccgttgtgatgagtctcttccttttgat 31050917  T

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Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 224
Target Start/End: Complemental strand, 2061855 - 2061758
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 224  Q
    ||||||||||| ||  || ||||||||||||  ||||||| | |||||||||||||| | |||||||||||||| |||||  |||||||| |||||||    
T  2061855 tctctggtgtatcgaaggtgaggggtgccctcttgatttgatcctaaagtctggtgggctgatcacttttgattcgagattgagagtcagttctttgg 2061758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 127
Target Start/End: Original strand, 30964150 - 30964266
Alignment:
Q  14 tgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcgatg 110  Q
    ||||||||||||||||| |||||||| |||||| |||||  |  ||||||||| ||| ||||||||  || ||||||||| |||||||| ||||| | ||    
T  30964150 tgttacacgggtccatgttcgtcgtcactagctattgtttgtgctttttgggtggtttaggtgtttgcggagtttggagggtgcgtgtcacgttgtgttg 30964249  T
Q  111 agccttttccttttgat 127  Q
    | |||||||||||||||    
T  30964250 aaccttttccttttgat 30964266  T

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Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 139 - 225
Target Start/End: Original strand, 19673077 - 19673162
Alignment:
Q  139 cgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 225  Q
    |||||| |||||||||||| ||| |||||| |||||||||||||||||  || ||||| ||| ||||||| ||||||| ||||||||    
T  19673077 cgggggtgaggggtgcccttctgttttggtcctaaagtctggtggaccattccctttt-attcgagatcaggagtcagttctttggc 19673162  T

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Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 22811276 - 22811179
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 225  Q
    ||||||||||| |||||  |||| ||||||| ||||||||||  ||||||||||||| ||||||| |||| ||| ||||||  ||||||| ||||||||    
T  22811276 tctctggtgtatcggggt-gaggagtgcccttctgatttggtcttaaagtctggtgggccgatcattttttattcgagatcgggagtcagttctttggc 22811179  T

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Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 35800476 - 35800533
Alignment:
Q  150 ggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 207  Q
    |||||||| ||||||||||||| |||||||||| ||||||| ||||||||| ||||||    
T  35800476 ggtgcccttctgatttggttctgaagtctggtgaaccgatcgcttttgattcgagatc 35800533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 207
Target Start/End: Complemental strand, 21387321 - 21387241
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 207  Q
    ||||||||| | |||||| ||||  | |||| |||||||||| ||  ||||||||||||||||||||||||||| ||||||    
T  21387321 tctctggtggatcgggggtgaggaatacccttctgatttggtgctggagtctggtggaccgatcacttttgattcgagatc 21387241  T

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Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 123
Target Start/End: Original strand, 4305434 - 4305546
Alignment:
Q  14 tgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcgatg 110  Q
    ||||||| || |||||| |||||||| ||||||||||||  |  |||||||||||||  |||||||  |||||||||| | | |||||| ||||| | ||    
T  4305434 tgttacatggatccatgttcgtcgtcactagctcttgtttgtgctttttgggttgtttgggtgttttcggtgtttggaaggttcgtgtcacgttgtgttg 4305533  T
Q  111 agccttttccttt 123  Q
    |||||||||||||    
T  4305534 agccttttccttt 4305546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 435
Target Start/End: Complemental strand, 31050580 - 31050440
Alignment:
Q  300 tgtggctcagcttgggtgttgaagtatg-----tttattttgagggttgctctttggaggtaagtagcgacgatgagtgttg-tggatactgtgttttca 393  Q
    ||||||| ||||||||||||||||| ||     ||||||||||||| || || |||| ||| ||||| |||||||  || || |||||  ||||||| ||    
T  31050580 tgtggctaagcttgggtgttgaagtctggctgttttattttgaggggtgttccttgggggtgagtagtgacgatggatgatggtggatgttgtgtttaca 31050481  T
Q  394 gtgttttgtttctattaaggtgtccgtcttaggtggtgatgt 435  Q
    |||||| | |||| || |||||| ||||||||||||||||||    
T  31050480 gtgttt-gcttctgttgaggtgttcgtcttaggtggtgatgt 31050440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 42 - 127
Target Start/End: Complemental strand, 22811504 - 22811416
Alignment:
Q  42 tagctcttgttt-catttttg-ggttgttaaggtgtttagggtgtttggaggatgcgtgt-ccgttgcgatgagccttttccttttgat 127  Q
    |||||||||||| | |||||| |||||||||||||||||||| |||||||||| ||| || ||||||   | |||||||||||||||||    
T  22811504 tagctcttgtttgcttttttgtggttgttaaggtgtttagggagtttggaggaagcgggtcccgttgatctaagccttttccttttgat 22811416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 134 - 205
Target Start/End: Complemental strand, 19311451 - 19311381
Alignment:
Q  134 tgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgaga 205  Q
    |||| |||||| |||||||| ||| ||||||||||| ||| |||||||||  ||||||||||||||| ||||    
T  19311451 tgtaacgggggtgaggggtgtccttctgatttggttttaa-gtctggtgggtcgatcacttttgattcgaga 19311381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 216
Target Start/End: Complemental strand, 36962713 - 36962643
Alignment:
Q  146 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcag 216  Q
    ||||||| || | ||||||||||| |  |||||||||| ||||| |||||||||| ||||||| |||||||    
T  36962713 gaggggtaccttactgatttggttttggagtctggtgggccgattacttttgattcgagatcaggagtcag 36962643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 39041344 - 39041302
Alignment:
Q  174 agtctggtggaccgatcacttttgatttgagatcaagagtcag 216  Q
    |||||||||| |||||||||||||||| ||||||| |||||||    
T  39041344 agtctggtgggccgatcacttttgattcgagatcaggagtcag 39041302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 39421111 - 39421050
Alignment:
Q  146 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 207  Q
    |||||||||||| ||||| ||||  || || ||||||| |||||||||||||||| ||||||    
T  39421111 gaggggtgcccttctgatatggtcttatagcctggtgggccgatcacttttgattcgagatc 39421050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 2e-43; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 127 - 287
Target Start/End: Original strand, 29087445 - 29087603
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    |||||| ||||||||||||||||||||| |||||  ||||||||||||||||||||||| |||| ||||||||| ||||||| ||||||| ||||||  |    
T  29087445 tctctgttgtaccgggggcgaggggtgctctgctattttggttctaaagtctggtggactgatcccttttgattcgagatcaggagtcagttctttg--a 29087542  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 287  Q
    || || ||||||| | |||||||||||||||||||||||||||||||||||| | ||||||    
T  29087543 atcaaattggtttctgggcttttgttttgtgctctttcggtggatcggaggtcgcgaggtt 29087603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 127 - 287
Target Start/End: Original strand, 34378062 - 34378219
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    ||||||||||||||||||| ||| |||||||||| ||||||| |||||||||||||| |||||||||||||||| ||||||  ||||||| |||||| ||    
T  34378062 tctctggtgtaccgggggcaaggagtgccctgctaatttggtactaaagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttgaca 34378161  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 287  Q
       |||||||||||| ||| |||||||||||||||||||||||| ||||||| | ||||||    
T  34378162 --caagttggtttttgggc-tttgttttgtgctctttcggtggaccggaggtcgcgaggtt 34378219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 127 - 287
Target Start/End: Original strand, 698325 - 698482
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||| ||||||  |||||| |||||||  |    
T  698325 tctctggtgtaccgggggcgaggggtgccctgctaatttggtgctatagtctggtggaccgatctcttttgattcgagatcgggagtcaactctttg--a 698422  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 287  Q
     | |||||||||||| ||| ||||| |||| ||||||| |||| || ||||||| ||||||    
T  698423 ctcaagttggtttttgggc-tttgtgttgtactctttctgtggttcagaggttgcgaggtt 698482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 127 - 226
Target Start/End: Complemental strand, 7392148 - 7392049
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    |||||| ||||||| ||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||  ||||||| |||||||||    
T  7392148 tctctgatgtaccgagggtgaggggtgcccttctgatttggtcctaaagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttggca 7392049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 127 - 278
Target Start/End: Original strand, 18593207 - 18593355
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    ||||| |||||||||||||||||| ||||||||| ||||||| ||| ||| | |||| | |||||||||||||| ||||||  |||| || ||||||  |    
T  18593207 tctctcgtgtaccgggggcgagggatgccctgctaatttggtgctatagtttagtgggcagatcacttttgattcgagatcgggagttagttctttg--a 18593304  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 278  Q
     | |||||||||||| ||| || || ||||||||||||||||| ||||||||    
T  18593305 ctcaagttggtttttgggc-ttagtgttgtgctctttcggtggttcggaggt 18593355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 127 - 224
Target Start/End: Complemental strand, 33258999 - 33258902
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 224  Q
    ||||||||||||||  || |||||||| ||| ||| |||||| |||||||||||||| |||||||||||||||| ||||||| |||| || |||||||    
T  33258999 tctctggtgtaccgaaggtgaggggtgtccttctgttttggtgctaaagtctggtgggccgatcacttttgattcgagatcaggagttagttctttgg 33258902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 127 - 301
Target Start/End: Complemental strand, 14302547 - 14302377
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    ||||||||||| || ||| ||||| |||||| ||| |||||| |||||||||||||||| ||||||||||| || |||||   ||||||| |||||||      
T  14302547 tctctggtgtatcgagggtgagggatgcccttctgttttggtcctaaagtctggtggactgatcacttttggttcgagattgggagtcagttctttgg-- 14302450  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatg 301  Q
    |  ||||| | |||| ||||||  || ||   |||||||||||||||||||| ||||||| |||||| |||||||    
T  14302449 agcaagtttggttttgggcttt--ttatggtttctttcggtggatcggaggtcgagaggtggtggaagctgcatg 14302377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 207
Target Start/End: Complemental strand, 13954350 - 13954271
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 207  Q
    ||||||||||||||  || |||||||||| | |||||||||| |||||||||||||| |||||||||||||||| ||||||    
T  13954350 tctctggtgtaccgaaggtgaggggtgcctt-ctgatttggtcctaaagtctggtgggccgatcacttttgattcgagatc 13954271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 24072626 - 24072546
Alignment:
Q  21 cgggtccatggtcgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 101  Q
    |||||||||  |||| ||||||||||||||||| | ||||||||||||||||||||||||||| ||  ||| |||||||||    
T  24072626 cgggtccatattcgttgtcgctagctcttgtttaagttttgggttgttaaggtgtttagggtgctttaagggtgcgtgtcc 24072546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 7195355 - 7195258
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 225  Q
    ||||||||||||| |||  |||||||||||| |||||||||   ||||||||||||  |||||||||||||||| ||||||  ||||||| ||||||||    
T  7195355 tctctggtgtaccagggt-gaggggtgcccttctgatttggccataaagtctggtgagccgatcacttttgattcgagatcgggagtcagttctttggc 7195258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 29087257 - 29087346
Alignment:
Q  14 tgttacacgggtccatggtcgtcgtcgctagctcttgtttca--tttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 101  Q
    ||||||| ||||||||| |||||||| |||||||||||||    ||||||||| ||| ||||||||| || |||||||||||||||||||    
T  29087257 tgttacatgggtccatgttcgtcgtcactagctcttgtttgtgttttttgggtggtttaggtgtttacggagtttggaggatgcgtgtcc 29087346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 293
Target Start/End: Complemental strand, 7162333 - 7162270
Alignment:
Q  230 aagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaa 293  Q
    |||||||||||| || |||||||||||||||||||| |||||||||||| | |||||| |||||    
T  7162333 aagttggtttttgggtttttgttttgtgctctttcgatggatcggaggtcgcgaggttatggaa 7162270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 7195613 - 7195523
Alignment:
Q  14 tgttacacgggtccatggtcgtcgtcgctagctcttgttt-catt--tttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 101  Q
    |||||| ||||||| || | || ||| ||||||||||||| ||||  |||||||| |||||||||||||||||||||||||| ||||||||    
T  7195613 tgttactcgggtccttgtttgttgtcactagctcttgtttacattgttttgggttattaaggtgtttagggtgtttggaggaagcgtgtcc 7195523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 8297432 - 8297530
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 225  Q
    ||||| |||||||| ||| |||||||||||| |||||||||||||||||  |||||| |  || | |||||||| ||||||  ||||||| ||||||||    
T  8297432 tctctagtgtaccgagggtgaggggtgcccttctgatttggttctaaagcatggtgggctaataatttttgattcgagatcgggagtcagttctttggc 8297530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 224
Target Start/End: Complemental strand, 24072383 - 24072286
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 224  Q
    ||||||||| |||| |||   |||||||||| |||||||||| |||||||||||| | | |||| ||||||||||||||||   |||||| |||||||    
T  24072383 tctctggtggaccgagggtttggggtgcccttctgatttggtcctaaagtctggttggctgatcgcttttgatttgagatcggaagtcagttctttgg 24072286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 31721641 - 31721730
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcag 216  Q
    ||||||||| ||||||||  ||||||||||| ||||| ||||||| ||||||  ||| |||||| ||||||||| ||||||  |||||||    
T  31721641 tctctggtggaccgggggtaaggggtgcccttctgatgtggttctgaagtctaatgggccgatcgcttttgattcgagatcgggagtcag 31721730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 22675402 - 22675343
Alignment:
Q  166 ggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 225  Q
    |||||||||||||||||||||||||  |||||||| ||||||  ||||||| ||||||||    
T  22675402 ggttctaaagtctggtggaccgatcgattttgattcgagatcgggagtcagttctttggc 22675343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 13954586 - 13954525
Alignment:
Q  32 tcgtcgtcgctagctcttgttt-catttttgg-gttgttaaggtgtttagggtgtttggagg 91  Q
    |||||||| ||||||||||||| | ||| ||| |||||||||||||||||||||||||||||    
T  13954586 tcgtcgtcactagctcttgtttgcgtttctggagttgttaaggtgtttagggtgtttggagg 13954525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 129 - 222
Target Start/End: Original strand, 25991973 - 25992066
Alignment:
Q  129 tctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctcttt 222  Q
    ||||||||||||  |  |||| ||||||| ||  |||||| |||||||||||||| || ||| ||||||||| |||||| |||||||| |||||    
T  25991973 tctggtgtaccgaagatgaggagtgcccttctattttggtgctaaagtctggtgggccaatcgcttttgattcgagatcgagagtcagttcttt 25992066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 207
Target Start/End: Complemental strand, 26046045 - 26046001
Alignment:
Q  163 tttggttctaaagtctggtggaccgatcacttttgatttgagatc 207  Q
    |||||| ||||||||||||| ||||||||||||||||| ||||||    
T  26046045 tttggtcctaaagtctggtgaaccgatcacttttgattcgagatc 26046001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 8730649 - 8730711
Alignment:
Q  21 cgggtccatggtcgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtg 83  Q
    |||||||||  |||| | ||||| ||||||||| | ||||| |||||||||||||||||||||    
T  8730649 cgggtccattttcgttgacgctacctcttgtttgagttttgagttgttaaggtgtttagggtg 8730711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 216
Target Start/End: Complemental strand, 28765700 - 28765630
Alignment:
Q  146 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcag 216  Q
    ||||||||||||  ||||||  ||||| | |||||||||  |||||||||||||| |||||| ||||||||    
T  28765700 gaggggtgccctaatgatttttttctagattctggtggattgatcacttttgattcgagatcgagagtcag 28765630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 26046349 - 26046256
Alignment:
Q  1 tggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt-catttttgggttg-ttaaggtgtttagggtgtttggagga 92  Q
    ||||||| |||| |||||| ||||||| || ||||| || |||||||||||||   |||||||| || || ||||||||||||||||| |||||    
T  26046349 tggagactgcctctgttactcgggtccttgttcgtcttcactagctcttgtttgtgtttttggggtgttttaggtgtttagggtgtttagagga 26046256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 206
Target Start/End: Original strand, 25341709 - 25341741
Alignment:
Q  174 agtctggtggaccgatcacttttgatttgagat 206  Q
    |||||||||| ||||||||||||||||||||||    
T  25341709 agtctggtgggccgatcacttttgatttgagat 25341741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 27712819 - 27712871
Alignment:
Q  32 tcgtcgtcgctagctcttgtttca-tttttgggttgttaaggtgtttagggtg 83  Q
    |||| ||||||| ||||||||||| ||||||||| | ||||||||||||||||    
T  27712819 tcgttgtcgctacctcttgtttcagtttttgggtggctaaggtgtttagggtg 27712871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 127 - 278
Target Start/End: Complemental strand, 35888 - 35741
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    |||||||||||||||||||||||||||||  ||| |||||||| || ||||| |||| |||||||||||||||| ||||||  ||||||  ||||||  |    
T  35888 tctctggtgtaccgggggcgaggggtgcctagctaatttggttatatagtctagtgggccgatcacttttgattcgagatcgggagtca-ttctttg--a 35792  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 278  Q
     |||||||||||||| ||| ||| | ||||||||||||||||||||||||||    
T  35791 cttaagttggtttttgggc-tttatgttgtgctctttcggtggatcggaggt 35741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 127 - 222
Target Start/End: Complemental strand, 16510418 - 16510323
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctcttt 222  Q
    |||||||||||||| |||| |||||||||||||| ||||||||||||||||| |||| |||||||||||||||| |||||  |||||||| |||||    
T  16510418 tctctggtgtaccgagggcaaggggtgccctgctaatttggttctaaagtctagtgggccgatcacttttgattcgagattgagagtcagttcttt 16510323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 127 - 287
Target Start/End: Original strand, 3117457 - 3117614
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    |||||||||| ||||||||||||||||||||||| ||||| |  || ||| |||||| ||||||||||||||||  |||||  ||||||| ||||||  |    
T  3117457 tctctggtgttccgggggcgaggggtgccctgctaatttgttgatatagtatggtgggccgatcacttttgattcaagatcgggagtcagttctttg--a 3117554  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 287  Q
     | |||||||||||| ||| ||||| |||||||||||  |||| |||||||| | ||||||    
T  3117555 ctcaagttggtttttgggc-tttgtgttgtgctctttatgtggttcggaggtcgcgaggtt 3117614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 127 - 293
Target Start/End: Complemental strand, 20701920 - 20701758
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 226  Q
    |||||||||||||||||| |||||||||||| ||||||||||  |  || ||||||  |||||||||||||||| ||||||  |||| || ||||||||     
T  20701920 tctctggtgtaccgggggtgaggggtgcccttctgatttggtcatttagactggtgtgccgatcacttttgattcgagatcgggagttagttctttggc- 20701822  T
Q  227 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaa 293  Q
     ||||||| | |||| ||||||  || ||   |||||||||||||||||||| ||||||| ||||||    
T  20701821 -ttaagtttggttttgggcttt--ttatggtttctttcggtggatcggaggtcgagaggtagtggaa 20701758  T

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Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 16510663 - 16510549
Alignment:
Q  16 ttacacgggtccatggtcgtcgtcgctagctcttgtttc--atttttgggttgttaaggtgtttagggtgtttggaggatgcgtg-tccgttgcgatgag 112  Q
    ||||||||||||||| |||||||| ||||||||||||||   |||| |||| ||| ||||||||| || ||||||||| |||||| ||||||| | ||||    
T  16510663 ttacacgggtccatgttcgtcgtcactagctcttgtttctgcttttcgggtggtttaggtgtttatggagtttggagggtgcgtgttccgttgtgttgag 16510564  T
Q  113 ccttttccttttgat 127  Q
    |||||||||||||||    
T  16510563 ccttttccttttgat 16510549  T

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Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 3880700 - 3880627
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatt 200  Q
    |||||||| ||||| ||| ||| |||||||| |||||||||| ||||||| |||||| ||||||||||||||||    
T  3880700 tctctggtttaccgagggtgagaggtgcccttctgatttggtcctaaagtttggtgggccgatcacttttgatt 3880627  T

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Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 20702182 - 20702086
Alignment:
Q  8 agcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt-catttttggg--ttgttaaggtgtttagggtgtttggaggatgcgtgtcc 101  Q
    |||||||||||| ||||||| || |||||||| |||| |||||| | ||||||| ||  ||||||||||||||||||||||||||||| ||| ||||    
T  20702182 agcctttgttactcgggtccttgttcgtcgtcactagttcttgtatgcattttttgggattgttaaggtgtttagggtgtttggaggaagcgggtcc 20702086  T

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Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 12793824 - 12793916
Alignment:
Q  9 gcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 101  Q
    ||||||||||  |||||||||  |||| ||| ||||||||||||| | || |||||||||||||||||| |||||||| |||| || ||||||    
T  12793824 gcctttgttattcgggtccatactcgttgtccctagctcttgtttaagttgtgggttgttaaggtgttttgggtgttttgagggtgtgtgtcc 12793916  T

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Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 15132640 - 15132585
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtg 182  Q
    |||||| ||||| ||||||||||||||||||| |||||| ||||||||||||||||    
T  15132640 tctctgatgtactgggggcgaggggtgccctgttgattttgttctaaagtctggtg 15132585  T

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Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 139 - 221
Target Start/End: Complemental strand, 32935444 - 32935362
Alignment:
Q  139 cgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctt 221  Q
    |||||| ||||||| |||| |||||||||| || ||||||||||| |||||| ||||||||| ||||||  ||||||| ||||    
T  32935444 cgggggtgaggggttcccttctgatttggtcctgaagtctggtgggccgatcgcttttgattcgagatcgggagtcagttctt 32935362  T

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Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 221
Target Start/End: Original strand, 12794098 - 12794173
Alignment:
Q  147 aggggtgccctgctgatttggttctaaagtctggtggaccgatc-acttttgatttgagatcaagagtcagctctt 221  Q
    ||||||| ||| ||| |||||||||||||||| |||| |||||| |||||||||| ||||||| ||||||| ||||    
T  12794098 aggggtgtccttctgttttggttctaaagtctagtgggccgatcaacttttgattcgagatcaggagtcagttctt 12794173  T

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Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 221
Target Start/End: Complemental strand, 26216112 - 26216042
Alignment:
Q  150 ggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctt 221  Q
    |||||||| |||||||| |||||| ||||||||| |||||||||||||||| ||||||  ||||||| ||||    
T  26216112 ggtgcccttctgatttgattctaa-gtctggtgggccgatcacttttgattcgagatcgggagtcagttctt 26216042  T

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Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 26534813 - 26534757
Alignment:
Q  150 ggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagat 206  Q
    |||| ||| |||||||||| || ||||||||||| |||||||||||||||| |||||    
T  26534813 ggtggccttctgatttggtcctgaagtctggtgggccgatcacttttgattcgagat 26534757  T

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Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 13423482 - 13423528
Alignment:
Q  179 ggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 225  Q
    |||||||||||||||||||||| |||||| |||||| | ||||||||    
T  13423482 ggtggaccgatcacttttgattcgagatcgagagtcggttctttggc 13423528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 207
Target Start/End: Complemental strand, 7546499 - 7546466
Alignment:
Q  174 agtctggtggaccgatcacttttgatttgagatc 207  Q
    ||||||||||||||||||||||||||| ||||||    
T  7546499 agtctggtggaccgatcacttttgattcgagatc 7546466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 224
Target Start/End: Original strand, 9224010 - 9224102
Alignment:
Q  131 tggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 224  Q
    ||||| |||||||| ||||| ||||||  | | ||||| |||||||||||||| | |||| ||||||||| ||||||  ||||||| |||||||    
T  9224010 tggtggaccgggggtgaggg-tgcccttttaagttggtcctaaagtctggtgggctgatcgcttttgattcgagatcgggagtcagttctttgg 9224102  T

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Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 34105410 - 34105466
Alignment:
Q  160 tgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcag 216  Q
    ||||||| ||||| ||| |||||| |||||||||||||||| ||||||  |||||||    
T  34105410 tgatttgtttctagagtttggtgggccgatcacttttgattcgagatcgggagtcag 34105466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 146 - 293
Target Start/End: Original strand, 19366 - 19509
Alignment:
Q  146 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttttggc 245  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||||||||||| ||||||   |||||| ||||||||  | ||||| | |||| |||    
T  19366 gaggggtgcccttctgatttggtcctaaagtctggtgggccgatcacttttgattcgagatcggaagtcagttctttggc--tcaagtttggttttgggc 19463  T
Q  246 ttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaa 293  Q
    |||  || ||   |||||||||||||||||||| ||||| | ||||||    
T  19464 ttt--ttatggtttctttcggtggatcggaggtcgagagttggtggaa 19509  T

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Target: scaffold0050 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 127 - 223
Target Start/End: Original strand, 36671 - 36767
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttg 223  Q
    |||||||||||||| | | |||||||||||| |||||||||| ||||||||||| || | |||||||||||||| ||||||  ||||||| ||||||    
T  36671 tctctggtgtaccgagagtgaggggtgcccttctgatttggtcctaaagtctggcgggctgatcacttttgattcgagatcgggagtcagttctttg 36767  T

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Target: scaffold0119 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 146 - 225
Target Start/End: Complemental strand, 42236 - 42157
Alignment:
Q  146 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 225  Q
    |||||||||||| ||||||| || |||||||||||||| |||||||||||||||| ||||||   |||||| ||||||||    
T  42236 gaggggtgcccttctgatttagtcctaaagtctggtgggccgatcacttttgattcgagatcggaagtcagttctttggc 42157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 42493 - 42432
Alignment:
Q  32 tcgtcgtcgctagctcttgttt-catttttggg-ttgttaaggtgtttagggtgtttggagg 91  Q
    |||||||| ||||||||||||| | |||||||| ||||||| ||||||| ||||||||||||    
T  42493 tcgtcgtcactagctcttgtttgcgtttttggggttgttaaagtgtttatggtgtttggagg 42432  T

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Target: scaffold0063 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 91
Target Start/End: Original strand, 57946 - 57981
Alignment:
Q  56 tttttgggttgttaaggtgtttagggtgtttggagg 91  Q
    ||||||||||||||||||||||||||||||||||||    
T  57946 tttttgggttgttaaggtgtttagggtgtttggagg 57981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 200
Target Start/End: Original strand, 58114 - 58164
Alignment:
Q  150 ggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatt 200  Q
    |||||||| | |||||||| ||||||| |||||| ||||||||||||||||    
T  58114 ggtgcccttcagatttggtcctaaagtttggtgggccgatcacttttgatt 58164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 33; Significance: 0.000000003; HSPs: 4)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 46822 - 46866
Alignment:
Q  33 cgtcgtcgctagctcttgtttcatttttgggttgttaaggtgttt 77  Q
    ||||||||||||||||||||| | |||||| ||||||||||||||    
T  46822 cgtcgtcgctagctcttgtttgagttttggattgttaaggtgttt 46866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 207
Target Start/End: Original strand, 47057 - 47137
Alignment:
Q  127 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 207  Q
    ||||||||| |||||||| |||||||||||| |||||| |   || | |||||||| ||| ||||||||||||| ||||||    
T  47057 tctctggtgaaccgggggtgaggggtgcccttctgattagaccctgatgtctggtgaaccaatcacttttgattcgagatc 47137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 59349 - 59417
Alignment:
Q  33 cgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 101  Q
    ||||||||||||||||||||| | | |||| |||||||||||||| |||||  | ||| ||||||||||    
T  59349 cgtcgtcgctagctcttgtttgagtattggattgttaaggtgttttgggtgccttgagcatgcgtgtcc 59417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 71457 - 71525
Alignment:
Q  33 cgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 101  Q
    ||||||||||||||||||||| | | |||| |||||||||||||| ||||| || |||  |||||||||    
T  71457 cgtcgtcgctagctcttgtttgagtattggattgttaaggtgttttgggtgctttgagcgtgcgtgtcc 71525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1613 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold1613
Description:

Target: scaffold1613; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 1359 - 1296
Alignment:
Q  38 tcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 101  Q
    |||||||||||||||| | |||||||| |||||| ||||||||||| || |||| || ||||||    
T  1359 tcgctagctcttgtttgagttttgggtcgttaagatgtttagggtgctttgagggtgtgtgtcc 1296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1613; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 1107 - 1037
Alignment:
Q  154 ccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 224  Q
    |||| ||||||||||  | ||||||||||| |||||| ||||||||| ||||||  ||||||| |||||||    
T  1107 cccttctgatttggtcatgaagtctggtgggccgatcgcttttgattcgagatcgggagtcagttctttgg 1037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 5772 - 5818
Alignment:
Q  232 gttggttttttggcttttgttttgtgctctttcggtggatcggaggt 278  Q
    |||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  5772 gttggtttttgggctttgtttttgtgctctttcggtagatcggaggt 5818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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