View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7205_low_11 (Length: 211)
Name: NF7205_low_11
Description: NF7205
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7205_low_11 |
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Alignment Details
Target: chr5 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 16 - 193
Target Start/End: Complemental strand, 31209715 - 31209538
Alignment:
| Q |
16 |
agaggaacatttccaccctctctcagaatcaaacgatgaattagaaaatctcattctgcacgaaaagaacgaaaacgattcgttaacgagtaaatcatac |
115 |
Q |
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| T |
31209715 |
agaggaacatttccaccctctctcagaatcaaatgatgaattagaaaatctcattctacacgaaaagaacgaaaacgattcgttaacgagtaaatcatac |
31209616 |
T |
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| Q |
116 |
tctaattaccggagcgtgatgtccacgctctctgattcaaacaattctcataaccatcctctctcatcgccgagcttc |
193 |
Q |
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| T |
31209615 |
tctaattaccggagcgtgatgtccacgctctctgattcaaacaattctcataaccatcctctctcatcgccgagcttc |
31209538 |
T |
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