View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7208_high_13 (Length: 237)

Name: NF7208_high_13
Description: NF7208
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7208_high_13
NF7208_high_13
[»] chr2 (24 HSPs)
chr2 (13-225)||(11909963-11910175)
chr2 (22-216)||(13162825-13163019)
chr2 (94-216)||(2021470-2021590)
chr2 (87-216)||(12950869-12950996)
chr2 (87-216)||(15852623-15852750)
chr2 (22-216)||(17784460-17784653)
chr2 (87-216)||(21332016-21332143)
chr2 (87-216)||(21341904-21342031)
chr2 (87-216)||(29485000-29485127)
chr2 (87-216)||(34834834-34834961)
chr2 (87-216)||(34841278-34841405)
chr2 (87-216)||(36782206-36782333)
chr2 (87-216)||(43267932-43268059)
chr2 (87-216)||(45012056-45012183)
chr2 (94-216)||(16856509-16856629)
chr2 (94-216)||(16817352-16817472)
chr2 (22-216)||(17789113-17789306)
chr2 (94-216)||(2157692-2157812)
chr2 (94-216)||(2164108-2164228)
chr2 (94-216)||(13901979-13902099)
chr2 (87-142)||(42931466-42931521)
chr2 (94-216)||(45700666-45700786)
chr2 (101-207)||(32739040-32739145)
chr2 (150-216)||(37439503-37439569)
[»] chr4 (17 HSPs)
chr4 (13-219)||(5660568-5660767)
chr4 (87-216)||(8103955-8104082)
chr4 (79-216)||(16838381-16838517)
chr4 (87-166)||(30238333-30238412)
chr4 (94-144)||(16405422-16405472)
chr4 (87-216)||(27590378-27590505)
chr4 (87-216)||(37368336-37368463)
chr4 (87-216)||(41373060-41373187)
chr4 (87-216)||(55462794-55462921)
chr4 (128-225)||(2947957-2948054)
chr4 (89-216)||(17456930-17457055)
chr4 (94-216)||(7780487-7780607)
chr4 (94-216)||(13594188-13594308)
chr4 (86-216)||(30211558-30211686)
chr4 (160-216)||(12097313-12097368)
chr4 (94-216)||(36754813-36754933)
chr4 (22-216)||(52183137-52183331)
[»] chr1 (26 HSPs)
chr1 (22-216)||(47646676-47646870)
chr1 (86-216)||(11913284-11913412)
chr1 (120-216)||(13248874-13248970)
chr1 (102-209)||(30659980-30660086)
chr1 (94-216)||(41305536-41305656)
chr1 (87-216)||(6238728-6238855)
chr1 (87-216)||(39053360-39053487)
chr1 (87-216)||(39059732-39059859)
chr1 (87-216)||(42091969-42092096)
chr1 (87-216)||(45015854-45015981)
chr1 (87-144)||(27240222-27240279)
chr1 (79-166)||(5445034-5445122)
chr1 (94-216)||(29001811-29001931)
chr1 (94-216)||(44241437-44241557)
chr1 (87-216)||(9869178-9869305)
chr1 (94-144)||(23764524-23764574)
chr1 (94-166)||(41299258-41299330)
chr1 (94-216)||(4599609-4599729)
chr1 (86-216)||(31072390-31072518)
chr1 (94-216)||(43686709-43686829)
chr1 (165-216)||(7063639-7063690)
chr1 (22-114)||(13431855-13431948)
chr1 (111-216)||(32797820-32797923)
chr1 (94-140)||(41297597-41297643)
chr1 (128-225)||(45620157-45620254)
chr1 (117-209)||(31473412-31473504)
[»] chr7 (30 HSPs)
chr7 (22-216)||(7412939-7413133)
chr7 (87-216)||(21642591-21642718)
chr7 (87-216)||(23612462-23612589)
chr7 (94-216)||(15949239-15949359)
chr7 (94-216)||(15914718-15914838)
chr7 (94-216)||(26601992-26602112)
chr7 (87-216)||(36875618-36875745)
chr7 (94-216)||(19089888-19090008)
chr7 (87-216)||(2446719-2446846)
chr7 (87-216)||(3924115-3924242)
chr7 (87-216)||(5049934-5050061)
chr7 (87-216)||(5056329-5056456)
chr7 (87-216)||(6795511-6795638)
chr7 (87-216)||(8185414-8185541)
chr7 (87-216)||(8192974-8193101)
chr7 (87-216)||(48353502-48353629)
chr7 (87-216)||(6020886-6021013)
chr7 (94-144)||(37026128-37026178)
chr7 (87-216)||(48347118-48347245)
chr7 (87-140)||(14298973-14299026)
chr7 (94-216)||(1379027-1379147)
chr7 (94-216)||(1948655-1948775)
chr7 (94-216)||(8142468-8142588)
chr7 (94-216)||(9642938-9643058)
chr7 (94-216)||(39432987-39433107)
chr7 (117-219)||(8881356-8881458)
chr7 (87-140)||(14287788-14287841)
chr7 (160-202)||(8138937-8138979)
chr7 (128-225)||(21901201-21901298)
chr7 (82-216)||(45433652-45433786)
[»] chr3 (16 HSPs)
chr3 (13-219)||(20651144-20651347)
chr3 (101-216)||(2785790-2785905)
chr3 (87-216)||(32746443-32746570)
chr3 (94-216)||(4311508-4311628)
chr3 (86-216)||(10941326-10941454)
chr3 (94-216)||(13015066-13015186)
chr3 (87-216)||(24179147-24179274)
chr3 (87-216)||(27501989-27502116)
chr3 (128-225)||(4590907-4591004)
chr3 (22-216)||(25692035-25692229)
chr3 (87-216)||(6036339-6036466)
chr3 (86-144)||(43931654-43931712)
chr3 (13-216)||(20952776-20952978)
chr3 (87-218)||(9570568-9570697)
chr3 (87-218)||(9577070-9577199)
chr3 (94-140)||(41353941-41353987)
[»] chr5 (21 HSPs)
chr5 (102-216)||(42747225-42747338)
chr5 (94-216)||(5876298-5876418)
chr5 (94-216)||(22360044-22360164)
chr5 (87-216)||(40958639-40958766)
chr5 (84-216)||(37335267-37335400)
chr5 (13-143)||(12505858-12505988)
chr5 (94-216)||(22313910-22314030)
chr5 (86-144)||(2438873-2438931)
chr5 (87-216)||(2957932-2958059)
chr5 (87-216)||(2966401-2966528)
chr5 (87-216)||(34357310-34357437)
chr5 (87-216)||(34359101-34359228)
chr5 (128-225)||(9843461-9843558)
chr5 (94-216)||(29980539-29980659)
chr5 (94-216)||(30041266-30041386)
chr5 (94-216)||(42150899-42151019)
chr5 (87-216)||(25894671-25894798)
chr5 (150-218)||(34738326-34738394)
chr5 (95-216)||(29414691-29414810)
chr5 (87-144)||(4973636-4973693)
chr5 (152-216)||(19853497-19853561)
[»] scaffold0053 (1 HSPs)
scaffold0053 (94-216)||(49770-49890)
[»] chr6 (22 HSPs)
chr6 (87-216)||(32328515-32328642)
chr6 (87-216)||(1428445-1428572)
chr6 (87-216)||(31547968-31548095)
chr6 (87-216)||(4020257-4020384)
chr6 (87-216)||(4026683-4026810)
chr6 (87-216)||(11058172-11058299)
chr6 (86-144)||(29906962-29907020)
chr6 (86-144)||(30117360-30117418)
chr6 (87-216)||(34648873-34649000)
chr6 (87-216)||(34655324-34655451)
chr6 (87-216)||(34711579-34711706)
chr6 (94-216)||(13671839-13671959)
chr6 (87-216)||(4738345-4738472)
chr6 (87-216)||(7069724-7069851)
chr6 (19-144)||(1167579-1167704)
chr6 (87-144)||(9864852-9864909)
chr6 (165-216)||(9846670-9846721)
chr6 (87-141)||(7062578-7062632)
chr6 (159-209)||(22870435-22870485)
chr6 (87-140)||(4186758-4186811)
chr6 (94-216)||(21262596-21262716)
chr6 (94-143)||(27670174-27670223)
[»] scaffold0936 (1 HSPs)
scaffold0936 (79-216)||(3286-3422)
[»] scaffold0043 (1 HSPs)
scaffold0043 (87-216)||(5027-5154)
[»] chr8 (17 HSPs)
chr8 (87-216)||(7311422-7311549)
chr8 (87-216)||(8013342-8013469)
chr8 (87-216)||(11358215-11358342)
chr8 (94-219)||(26250610-26250733)
chr8 (87-216)||(36005504-36005631)
chr8 (87-216)||(36021821-36021948)
chr8 (87-216)||(36076040-36076167)
chr8 (87-216)||(36425752-36425879)
chr8 (87-216)||(41242138-41242265)
chr8 (128-225)||(7933939-7934036)
chr8 (94-216)||(1238294-1238414)
chr8 (87-216)||(6464598-6464725)
chr8 (160-216)||(29337034-29337090)
chr8 (94-144)||(12768824-12768874)
chr8 (100-216)||(31017470-31017586)
chr8 (79-144)||(45068508-45068574)
chr8 (175-216)||(9774056-9774097)
[»] scaffold0343 (1 HSPs)
scaffold0343 (94-144)||(2725-2775)
[»] scaffold0510 (2 HSPs)
scaffold0510 (94-166)||(2630-2702)
scaffold0510 (94-140)||(8977-9023)
[»] scaffold0513 (1 HSPs)
scaffold0513 (95-216)||(12014-12133)
[»] scaffold0060 (1 HSPs)
scaffold0060 (88-136)||(15245-15293)


Alignment Details
Target: chr2 (Bit Score: 193; Significance: 1e-105; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 13 - 225
Target Start/End: Complemental strand, 11910175 - 11909963
Alignment:
Q  13 gacatcaaatatcattttaagttaaagattaattggtttgtttgtttagaaactatgtaaactactttgcaagaataaaagtgagattaataaggcgtaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11910175 gacatcaaatatcattttaagttaaagattaattggtttgtttgtttagaaactatgtaaactaatttgcaagaataaaagtgagattaataaggcgtaa 11910076  T
Q  113 aatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatctatattatcacgtatcactcg 212  Q
    || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  11910075 aacttgttaggattagagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatctatattatcacgtatcagtcg 11909976  T
Q  213 acaatattcttcg 225  Q
    |||||||| ||||    
T  11909975 acaatattattcg 11909963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 216
Target Start/End: Original strand, 13162825 - 13163019
Alignment:
Q  22 tatcattttaagttaaagattaattggtttgtttgtttagaaactatgtaaactactttgcaagaataaaagt-gagattaataaggcgtaaaatttgtt 120  Q
    ||||||||||||||||||||||||| | ||||||||||| ||||||    |||||  |||| |  |||||||| |||| ||||||||||||||| |||||    
T  13162825 tatcattttaagttaaagattaatttggttgtttgttta-aaactacaagaactaaattgcgaagataaaagttgagagtaataaggcgtaaaacttgtt 13162923  T
Q  121 aggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatctatattatcacgtatcactcgacaa 216  Q
    |||||| |||||| |||| |||| ||| |||||||   ||||| ||||||||| ||||||||||||||||| ||||||||||||||| ||||||||    
T  13162924 aggattagagttcattgaccaagaatcgcatataacataatgatcacatatacagattctagcttttaatcaatattatcacgtatccctcgacaa 13163019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 2021590 - 2021470
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||||||||| || |||||| ||||||||||| ||||||||||||||||| || || |||| | ||||||  |||| | ||||||||||||||  |  |    
T  2021590 tgagattaatagggtgtaaaacttgttaggattagagttccttgatcaagcgtcacacataacctaatgac--catacatggattctagcttttctttga 2021493  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    |||||||||||||| ||||||||    
T  2021492 tattatcacgtatccctcgacaa 2021470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 12950869 - 12950996
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||||||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | |||||||||||||    
T  12950869 ataaaattgagattaataaggcgtaaaacttgttaggattagagttccttgatcgagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 12950966  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  12950967 tctttgatattatcacgtatccctcgacaa 12950996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 15852623 - 15852750
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | ||||| |||| ||  |||||||||||||    
T  15852623 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagcgtcacacttaacctaatgatcacacat--ggattctagcttt 15852720  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  15852721 tctttgatattatcacgtatccctcgacaa 15852750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 216
Target Start/End: Complemental strand, 17784653 - 17784460
Alignment:
Q  22 tatcattttaagttaaagattaattggtttgtttgtttagaaactatgtaaactactttgcaagaataaaag-tgagattaataaggcgtaaaatttgtt 120  Q
    |||||||||||||||| || ||||| ||||||||||||| ||||||    ||||| |||||||  ||||||| ||||| |||||||||||||||   |||    
T  17784653 tatcattttaagttaaggagtaatttgtttgtttgttta-aaactacaagaactaatttgcaaagataaaagttgagagtaataaggcgtaaaa-gcgtt 17784556  T
Q  121 aggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatctatattatcacgtatcactcgacaa 216  Q
     | ||| |||||||||||| |||| ||  | |||| | ||| | |||||||| | |||||||| ||| | | ||||||||||||||| ||||||||    
T  17784555 ggaattagagttccttgattaagcgtcaaacataacctaataatcacatatatgaattctagcgttttaccgatattatcacgtatcgctcgacaa 17784460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 21332143 - 21332016
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | |||||   |||| | |||||||||||||    
T  21332143 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagcgtcacacgtaacctaatga--tcatacatggattctagcttt 21332046  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  21332045 tctttgatattatcacgtatccctcgacaa 21332016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 21342031 - 21341904
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | |||||   |||| | |||||||||||||    
T  21342031 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagcgtcacacgtaacctaatga--tcatacatggattctagcttt 21341934  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  21341933 tctttgatattatcacgtatccctcgacaa 21341904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 29485000 - 29485127
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | |||||   |||| | |||||||||||||    
T  29485000 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 29485097  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  29485098 tctttgatattatcacgtatccctcgacaa 29485127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 34834961 - 34834834
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | |||||||||||||    
T  34834961 ataaaattgagattaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 34834864  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  34834863 tctttgatattatcacgtatccctcgacaa 34834834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 34841405 - 34841278
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | |||||||||||||    
T  34841405 ataaaattgagattaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 34841308  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  34841307 tctttgatattatcacgtatccctcgacaa 34841278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 36782333 - 36782206
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | |||||||||||||    
T  36782333 ataaaattgagattaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcacacgtaacctaatga--tcatacatggattctagcttt 36782236  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  36782235 tctttgatattatcacgtatccctcgacaa 36782206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 43267932 - 43268059
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | |||||||||||||    
T  43267932 ataaaattgagattaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 43268029  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  43268030 tctttgatattatcacgtatccctcgacaa 43268059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 45012056 - 45012183
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | |||||   |||| | |||||||||||||    
T  45012056 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 45012153  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  45012154 tctttgatattatcacgtatccctcgacaa 45012183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 16856629 - 16856509
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||||||||| ||||||| | ||||||||||| ||||| ||||||||||| || || |||| | ||||||  |||| | ||||||||||||||  |  |    
T  16856629 tgagattaatagggcgtaanacttgttaggattagagtttcttgatcaagcgtcacacataacctaatgac--catacatggattctagcttttctttga 16856532  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    ||||||||| |||| ||||||||    
T  16856531 tattatcacatatccctcgacaa 16856509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 16817472 - 16817352
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||||||||| ||||||| | ||||||||||| ||||| ||||||||||| || || |||| | ||||||  |||| | ||||||||||||||  |  |    
T  16817472 tgagattaatagggcgtaacacttgttaggattagagtttcttgatcaagcgtcacacataacctaatgac--catacatggattctagcttttctttga 16817375  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    ||||||||| |||| ||||||||    
T  16817374 tattatcacatatccctcgacaa 16817352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 216
Target Start/End: Complemental strand, 17789306 - 17789113
Alignment:
Q  22 tatcattttaagttaaagattaattggtttgtttgtttagaaactatgtaaactactttgcaagaataaaag-tgagattaataaggcgtaaaatttgtt 120  Q
    |||||||||||||||| || ||||| || |||||||||| ||||||    ||||| |||||||  ||||||| ||||| |||||||||||||||   |||    
T  17789306 tatcattttaagttaaggagtaatttgtgtgtttgttta-aaactacaagaactaatttgcaaagataaaagttgagagtaataaggcgtaaaa-gcgtt 17789209  T
Q  121 aggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatctatattatcacgtatcactcgacaa 216  Q
     | ||| |||||||||||| |||| ||  | ||||   ||| | |||||||| |||||||||| ||| | | ||||||||||||||| ||||||||    
T  17789208 ggaattagagttccttgattaagcgtcaaacataacataataatcacatatatggattctagcgttttaccgatattatcacgtatcgctcgacaa 17789113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 2157692 - 2157812
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | |||||||| |||||  |  |    
T  2157692 tgagattaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcgcacgtaacctaatga--tcatacatggattctatcttttctttga 2157789  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    |||||||||||||| ||||||||    
T  2157790 tattatcacgtatccctcgacaa 2157812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 2164108 - 2164228
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||    ||| | ||||||||||||||  |  |    
T  2164108 tgagattaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcgcacgtaacctaatga--ttatacatggattctagcttttctttga 2164205  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    |||||||||||||| ||||||||    
T  2164206 tattatcacgtatccctcgacaa 2164228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 13902099 - 13901979
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | |||||||||||| |  |  |    
T  13902099 tgagattaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcgcacgtaacctaatga--gcatacatggattctagcttgtctttga 13902002  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    |||||||||||||| ||||||||    
T  13902001 tattatcacgtatccctcgacaa 13901979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 142
Target Start/End: Complemental strand, 42931521 - 42931466
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaa 142  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| |||||||||||||||    
T  42931521 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaa 42931466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 45700786 - 45700666
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||||||||||||||| ||| ||||||| ||| ||||||||||||||| | || || |||| | |||||   ||||   ||||||||||||||  |  |    
T  45700786 tgagattaataaggcgtgaaacttgttagaattagagttccttgatcaaacgtcacacataacctaatga--tcatacctggattctagcttttctttga 45700689  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    |||||||||||||| ||||||||    
T  45700688 tattatcacgtatccctcgacaa 45700666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 207
Target Start/End: Original strand, 32739040 - 32739145
Alignment:
Q  101 aataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatctatattatc 200  Q
    ||||||||||||||   ||| ||||| |||||| ||||| |||| ||  |||||| | ||||| ||||||||||||||||||| ||| | | ||||||||    
T  32739040 aataaggcgtaaaagg-gttgggattagagttcgttgattaagcgtcgaatataacctaatgatcacatatacggattctagcgttttaccgatattatc 32739138  T
Q  201 acgtatc 207  Q
    |||||||    
T  32739139 acgtatc 32739145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 216
Target Start/End: Complemental strand, 37439569 - 37439503
Alignment:
Q  150 atataatccaatgaccacatatacggattctagcttttaatctatattatcacgtatcactcgacaa 216  Q
    |||||| | |||||||||||||| |||||||||  ||| | | ||||||||||||||||||| ||||    
T  37439569 atataacctaatgaccacatatatggattctagtgttttaccgatattatcacgtatcactcaacaa 37439503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 5e-37; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 5660767 - 5660568
Alignment:
Q  13 gacatcaaatatcattttaagttaa-agattaattggtttgtttgtttagaaactatgtaaactactttgcaagaataaaagt-gagattaataaggcgt 110  Q
    |||| |||||||||||||||||||| |||||     |||||||||||||  |||||||| ||||| ||||||||||||||||| ||||||||||||||||    
T  5660767 gacaccaaatatcattttaagttaagagatt-----gtttgtttgttta--aactatgtgaactaatttgcaagaataaaagttgagattaataaggcgt 5660675  T
Q  111 aaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatctatattatcacgtatcact 210  Q
     ||| ||||||||||| |||||||||||||||||||| ||| ||| | |||||   ||||||||||||||| |||||  |  |||| |||||||||| ||    
T  5660674 gaaacttgttaggattagagttccttgatcaagcatcacatgtaacctaatga--tcatatacggattctaacttttctttgatataatcacgtatccct 5660577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 8103955 - 8104082
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | ||||| |||| ||  |||||||||||||    
T  8103955 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagcgtcacacgtaacctaatgatcacacat--ggattctagcttt 8104052  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  8104053 tctttgatattatcacgtatccctcgacaa 8104082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 79 - 216
Target Start/End: Complemental strand, 16838517 - 16838381
Alignment:
Q  79 ttgcaagaataaaagt-gagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggat 177  Q
    |||||||| ||||||| |||||||||||||||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | ||||||  |||| | ||||    
T  16838517 ttgcaagagtaaaagttgagattaataaggcgtgaaacttgttaggattagagttccttgatcaagcgtcacacgtaacctaatgac--catacatggat 16838420  T
Q  178 tctagcttttaatctatattatcacgtatcactcgacaa 216  Q
    |||| |||||  |  ||||||||| ||||| ||||||||    
T  16838419 tctatcttttctttgatattatcatgtatccctcgacaa 16838381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 30238333 - 30238412
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgacca 166  Q
    |||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||||||| || || |||| | ||||||||    
T  30238333 ataaaattgagattaatagggcgtaaaacttgttaggattagagttccttgatcaagcgtcacacataacctaatgacca 30238412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 16405422 - 16405472
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagc 144  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  16405422 tgagattaataaggcgtaaaacttgttaggattagagttccttgatcaagc 16405472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 27590378 - 27590505
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | |||||   |||| | |||||||||||||    
T  27590378 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 27590475  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  27590476 tctttgatattatcacgtatccctcgacaa 27590505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 37368463 - 37368336
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | |||||   |||| | |||||||||||||    
T  37368463 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagcgtcacacgtaacctaatga--tcatacatggattctagcttt 37368366  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  37368365 tctttgatattatcacgtatccctcgacaa 37368336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 41373060 - 41373187
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | |||||||||||||    
T  41373060 ataaaattgagattaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 41373157  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  41373158 tctttgatattatcacgtatccctcgacaa 41373187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 55462921 - 55462794
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | |||||   |||| | |||||||||||||    
T  55462921 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagcgtcacacgtaacctaatga--tcatacatggattctagcttt 55462824  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  55462823 tctttgatattatcacgtatccctcgacaa 55462794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 225
Target Start/End: Original strand, 2947957 - 2948054
Alignment:
Q  128 gagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatctatattatcacgtatcactcgacaatattcttcg 225  Q
    ||||||||||||||||||||  |||||||| ||| | |||||||| |||||||||| ||| | | ||||||||||||||| ||| |||| ||| ||||    
T  2947957 gagttccttgatcaagcatcaaatataatctaataatcacatatatggattctagcgttttaccgatattatcacgtatcgctcaacaagattattcg 2948054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 17456930 - 17457055
Alignment:
Q  89 aaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagctttta 188  Q
    |||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | |||||   |||| | ||||||||||||||     
T  17456930 aaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagcgtcgcacgtaacctaatga--tcatacatggattctagcttttc 17457027  T
Q  189 atctatattatcacgtatcactcgacaa 216  Q
     |  ||||||||||||||| ||||||||    
T  17457028 tttgatattatcacgtatccctcgacaa 17457055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 7780487 - 7780607
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||| ||||| ||||||||| ||||||||||| |||||||||||| |||| || ||  ||| | |||||   |||| | ||||||||||||||  |  |    
T  7780487 tgagagtaatagggcgtaaaacttgttaggattagagttccttgattaagcgtcacacgtaacctaatga--tcatacatggattctagcttttctttga 7780584  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    |||||||||||||| ||||||||    
T  7780585 tattatcacgtatccctcgacaa 7780607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 13594188 - 13594308
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||||||| | ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | ||||||||||||||  |  |    
T  13594188 tgagattaacagggcgtaaaacttgttaggattagagttccttgatcgagcgtcacacgtaacctaatga--tcatacatggattctagcttttctttga 13594285  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    |||||||||||||| ||||||||    
T  13594286 tattatcacgtatccctcgacaa 13594308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 216
Target Start/End: Complemental strand, 30211686 - 30211558
Alignment:
Q  86 aataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagctt 185  Q
    ||||||| ||||||||||||||| | ||| |||||| |||| ||||||||| ||||||| || || ||||   ||||||  |||| | ||||||||| ||    
T  30211686 aataaaattgagattaataaggcatgaaacttgttatgattagagttccttaatcaagcgtcacacataacttaatgac--catacatggattctagatt 30211589  T
Q  186 ttaatctatattatcacgtatcactcgacaa 216  Q
    ||  |  ||||||||||||||| ||||||||    
T  30211588 ttctttgatattatcacgtatccctcgacaa 30211558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 12097313 - 12097368
Alignment:
Q  160 atgaccacatatacggattctagcttttaatctatattatcacgtatcactcgacaa 216  Q
    ||||||||||| ||||||||||||||||| || ||||||||||  ||||||||||||    
T  12097313 atgaccacataaacggattctagcttttactcgatattatcac-aatcactcgacaa 12097368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 36754933 - 36754813
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||||||||||||||| ||| || ||||||||  |||||||| ||||||| || || || | | ||||||  |||| | ||||||||||||||  |  |    
T  36754933 tgagattaataaggcgtgaaacttattaggattgaagttccttaatcaagcgtcacacattacctaatgac--catacatggattctagcttttctttga 36754836  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    |||||||| ||||| ||||||||    
T  36754835 tattatcatgtatccctcgacaa 36754813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 216
Target Start/End: Complemental strand, 52183331 - 52183137
Alignment:
Q  22 tatcattttaagttaaagattaattggtttgtttgtt-tagaaactatgtaaactactttgcaagaataaaa-gtgagattaataaggcgtaaaatttgt 119  Q
    |||||||||||||||  | |||||||| ||||||||| || | |||| | ||||||  |||| | ||||||| | |||| ||||||||| |||||   ||    
T  52183331 tatcattttaagttagggtttaattgg-ttgtttgttataaagactacgaaaactaaattgcgataataaaaggggagagtaataaggcataaaa-acgt 52183234  T
Q  120 taggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatctatattatcacgtatcactcgacaa 216  Q
    | ||||| |||||| ||||| |||||||  |||||||| ||||| ||| ||||  ||||||||  ||| | | ||||||||| ||||||||| ||||    
T  52183233 tgggattagagttcgttgattaagcatcgaatataatctaatgaacacgtatattgattctagtgttttaccgatattatcatgtatcactctacaa 52183137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 7e-36; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 22 - 216
Target Start/End: Original strand, 47646676 - 47646870
Alignment:
Q  22 tatcattttaagttaaa-gattaattggtttgtttgtttagaaactatgtaaactactttgcaagaataaaagt-gagattaataaggcgtaaaatttgt 119  Q
    ||||||||||||||||| |||||||||||| |||||||| |||||||  | |||||  |||||||| || |||| |||   |||||||||||||| ||||    
T  47646676 tatcattttaagttaaaagattaattggtt-gtttgttt-gaaactaaatgaactaaattgcaagattacaagttgaggggaataaggcgtaaaacttgt 47646773  T
Q  120 taggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatctatattatcacgtatcactcgacaa 216  Q
    || |||| |||||| |||| |||| ||| ||||||| | ||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  47646774 tatgattagagttcgttgaccaagaatcacatataacctaatgatcacatatacggattctagcttttaatcgatattatcacgtatccctcgacaa 47646870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 86 - 216
Target Start/End: Complemental strand, 11913412 - 11913284
Alignment:
Q  86 aataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagctt 185  Q
    ||||||| ||||||||||||||||| ||| ||||||||||| ||||||||||| |||||||| ||| ||| | ||||||  |||| | ||||||||||||    
T  11913412 aataaaattgagattaataaggcgtgaaacttgttaggattagagttccttgaccaagcatcacatgtaacctaatgac--catacatggattctagctt 11913315  T
Q  186 ttaatctatattatcacgtatcactcgacaa 216  Q
    ||  |  ||||||||||||||| ||||||||    
T  11913314 ttctttgatattatcacgtatccctcgacaa 11913284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 216
Target Start/End: Original strand, 13248874 - 13248970
Alignment:
Q  120 taggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatctatattatcacgtatcactcgacaa 216  Q
    ||||||| |||||| | || ||||| || |||||| || |||||||||||||||||||| |||| ||||||| ||||||||| ||||||| ||||||    
T  13248874 taggattggagttcgtcgaccaagcttcgcatatattctaatgaccacatatacggattttagcatttaatcaatattatcatgtatcacccgacaa 13248970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 209
Target Start/End: Original strand, 30659980 - 30660086
Alignment:
Q  102 ataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatctatattatca 201  Q
    ||||||||||||| | ||||||||| |||||| | || ||||| || |||||| ||  |||||||||||||||||||||||| ||||||| ||| |||||    
T  30659980 ataaggcgtaaaact-gttaggattagagttcgtcgaccaagcttcacatatattcttatgaccacatatacggattctagcctttaatcaatagtatca 30660078  T
Q  202 cgtatcac 209  Q
     |||||||    
T  30660079 tgtatcac 30660086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 41305656 - 41305536
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||| ||||| ||||||||| ||||||||||| |||||||||||| |||| || || |||| | ||||||  |||| | ||||||||||||||  |  |    
T  41305656 tgagagtaatagggcgtaaaacttgttaggattagagttccttgattaagcgtcacacataacctaatgac--catacatggattctagcttttctttga 41305559  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    |||||||||||||| ||||||||    
T  41305558 tattatcacgtatccctcgacaa 41305536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 6238728 - 6238855
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | |||||||||||||    
T  6238728 ataaaattgagattaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 6238825  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  6238826 tctttgatattatcacgtatccctcgacaa 6238855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 39053487 - 39053360
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | |||||   |||| | |||||||||||||    
T  39053487 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 39053390  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  39053389 tctttgatattatcacgtatccctcgacaa 39053360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 39059859 - 39059732
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | |||||   |||| | |||||||||||||    
T  39059859 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 39059762  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  39059761 tctttgatattatcacgtatccctcgacaa 39059732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 42091969 - 42092096
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | |||||||||||||    
T  42091969 ataaaattgagattaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 42092066  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  42092067 tctttgatattatcacgtatccctcgacaa 42092096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 45015854 - 45015981
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | |||||||||||||    
T  45015854 ataaaattgagattaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 45015951  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  45015952 tctttgatattatcacgtatccctcgacaa 45015981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 27240279 - 27240222
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagc 144  Q
    |||||| ||||||||||||||||| ||| ||||||||||| |||||||||||||||||    
T  27240279 ataaaattgagattaataaggcgtgaaacttgttaggattagagttccttgatcaagc 27240222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 166
Target Start/End: Complemental strand, 5445122 - 5445034
Alignment:
Q  79 ttgcaagaataaaagt-gagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgacca 166  Q
    |||||||| ||||||| ||||||||||||| || ||| ||||||||||| ||||||||||||||||| || || |||| | ||||||||    
T  5445122 ttgcaagagtaaaagttgagattaataaggtgtgaaacttgttaggattagagttccttgatcaagcctcacacataacctaatgacca 5445034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 29001811 - 29001931
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||||||||||||||||||| ||||||||||| |||||||||| || ||| || ||  ||| | |||||   |||| | ||||||||||||||  |  |    
T  29001811 tgagattaataaggcgtaaaacttgttaggattagagttccttggtcgagcgtcacacgtaacctaatga--tcatacatggattctagcttttctttga 29001908  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    |||||||||||||| ||||||||    
T  29001909 tattatcacgtatccctcgacaa 29001931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 44241437 - 44241557
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||||||||||||||| ||| ||||||||||| |||||| |||||||||| || ||  ||| | |||||   |||| | ||||||||||||||  |  |    
T  44241437 tgagattaataaggcgtgaaacttgttaggattagagttcattgatcaagcgtcacacgtaacctaatga--tcatacatggattctagcttttctttga 44241534  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    |||||||||||||| ||||||||    
T  44241535 tattatcacgtatccctcgacaa 44241557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 9869178 - 9869305
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| |||||||||||||| || ||| ||||||||||| ||||||||||||||||| || ||  ||| | |||||   |||| | |||||||||||||    
T  9869178 ataaaattgagattaataaggtgtgaaacttgttaggattagagttccttgatcaagcgtcacacgtaacctaatga--tcatacatggattctagcttt 9869275  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||| ||||| ||||||||    
T  9869276 tctttgatattatcatgtatccctcgacaa 9869305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 23764574 - 23764524
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagc 144  Q
    ||||||||||| ||||||||| ||||||||||| |||||||||||||||||    
T  23764574 tgagattaatagggcgtaaaacttgttaggattagagttccttgatcaagc 23764524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 41299330 - 41299258
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgacca 166  Q
    ||||| ||||| ||||||||| ||||||||||| |||||||||||| |||| || ||||||| | ||||||||    
T  41299330 tgagagtaatagggcgtaaaacttgttaggattagagttccttgattaagcgtcacatataacctaatgacca 41299258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 4599609 - 4599729
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||| ||||| ||||||||| ||||||||||| |||||||||||| |||| || ||  ||| | |||||   |||| | ||||||||||||||  |  |    
T  4599609 tgagagtaatagggcgtaaaacttgttaggattagagttccttgattaagcgtcacacgtaacctaatga--tcatacatggattctagcttttctttga 4599706  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    |||||||||||||| ||||||||    
T  4599707 tattatcacgtatccctcgacaa 4599729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 216
Target Start/End: Original strand, 31072390 - 31072518
Alignment:
Q  86 aataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagctt 185  Q
    ||||||| ||||||||||||||| | ||| ||||||||||| ||||||||| ||||||| || ||  ||| | ||||||  |||| | ||| ||||||||    
T  31072390 aataaaattgagattaataaggcatgaaacttgttaggattagagttccttaatcaagcgtcacacgtaacctaatgac--catacatggactctagctt 31072487  T
Q  186 ttaatctatattatcacgtatcactcgacaa 216  Q
    ||  |  ||||||||| ||||| ||||||||    
T  31072488 ttctttgatattatcatgtatccctcgacaa 31072518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 43686709 - 43686829
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||||||| | ||||||||| ||||||||||| ||||||||||||| ||| || ||| ||| | |||||   |||| | ||||||||||||||  |  |    
T  43686709 tgagattaacagggcgtaaaacttgttaggattagagttccttgatcgagcgtctcatttaacctaatga--tcatacatggattctagcttttctttga 43686806  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    |||||||| ||||| ||||||||    
T  43686807 tattatcatgtatccctcgacaa 43686829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 7063690 - 7063639
Alignment:
Q  165 cacatatacggattctagcttttaatctatattatcacgtatcactcgacaa 216  Q
    |||||| | |||||||||||||||||| ||||||||||  ||||||||||||    
T  7063690 cacataaatggattctagcttttaatcgatattatcacaaatcactcgacaa 7063639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 13431855 - 13431948
Alignment:
Q  22 tatcattttaagttaaagattaa-ttggtttgtttgtttagaaactatgtaaactactttgcaagaataaaag-tgagattaataaggcgtaaaa 114  Q
    ||||||||||||||||||| ||| ||||||| |||||||| |||||||| ||||||   ||| |  ||||||| ||||| |||||||||||||||    
T  13431855 tatcattttaagttaaagagtaatttggtttatttgttta-aaactatgaaaactataatgcgaagataaaagttgagagtaataaggcgtaaaa 13431948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 216
Target Start/End: Original strand, 32797820 - 32797923
Alignment:
Q  111 aaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatctatattatcacgtatcact 210  Q
    |||| ||||||||||| ||||||||| ||||||| || ||  ||| | |||||||| | ||  ||||||||||||||  |  ||||||||||||||| ||    
T  32797820 aaaacttgttaggattagagttccttaatcaagcgtcacacgtaacctaatgaccatacat--ggattctagcttttctttgatattatcacgtatccct 32797917  T
Q  211 cgacaa 216  Q
    ||||||    
T  32797918 cgacaa 32797923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 140
Target Start/End: Original strand, 41297597 - 41297643
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatc 140  Q
    ||||| ||||| ||||||||| ||||||||||| |||||||||||||    
T  41297597 tgagagtaatagggcgtaaaacttgttaggattagagttccttgatc 41297643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 225
Target Start/End: Complemental strand, 45620254 - 45620157
Alignment:
Q  128 gagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatctatattatcacgtatcactcgacaatattcttcg 225  Q
    |||||||||||| |||| ||  | |||| | ||| | |||||||| |||||||||| ||| | | ||||||||||||||| |||||||| ||| ||||    
T  45620254 gagttccttgattaagcttcaaacataacctaataatcacatatatggattctagcgttttaccgatattatcacgtatcgctcgacaagattattcg 45620157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 209
Target Start/End: Original strand, 31473412 - 31473504
Alignment:
Q  117 tgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatctatattatcacgtatcac 209  Q
    |||||||||| |||||| | || ||||| |  |||||| || ||||||||||||||   |||||||| || |||| |||||||||| ||||||    
T  31473412 tgttaggattagagttcgtcgaccaagctttgcatatattctaatgaccacatatataaattctagccttcaatcgatattatcacatatcac 31473504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 22 - 216
Target Start/End: Complemental strand, 7413133 - 7412939
Alignment:
Q  22 tatcattttaagttaaagattaattggtttgtttgtttagaaactatgtaaactactttgcaagaataaaagt-gagattaataaggcgtaaaatttgtt 120  Q
    ||||||||||||||||||||||||| | |||||||||| |||||||||| |||||  |||||||||||||||| |||| ||||||||  ||||| ||  |    
T  7413133 tatcattttaagttaaagattaatttggttgtttgttt-gaaactatgtgaactaaattgcaagaataaaagttgagagtaataaggtataaaactttct 7413035  T
Q  121 aggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatctatattatcacgtatcactcgacaa 216  Q
    |||||| |||||| ||||||||| ||| ||||||  | || || || |||||| ||||||||||||||| | ||||||||| ||||| ||||||||    
T  7413034 aggattagagttcattgatcaagtatcacatatagcctaacgatcatatatacagattctagcttttaagcgatattatcatgtatccctcgacaa 7412939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 21642591 - 21642718
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| |||||||||||||||||||| || |||| | |||||  ||| | | |||||||||||||    
T  21642591 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagcatcacacataacctaatga--acaaacatggattctagcttt 21642688  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    | ||  ||||||||||||||| ||||||||    
T  21642689 tcattgatattatcacgtatccctcgacaa 21642718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 23612462 - 23612589
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||||||| || || |||| | ||||||  |||| | |||||||||||||    
T  23612462 ataaaattgagattaatagggcgtaaaacttgttaggattagagttccttgatcaagcgtcacacataacctaatgac--catacatggattctagcttt 23612559  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  23612560 tctttgatattatcacgtatccctcgacaa 23612589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 15949239 - 15949359
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||||||||||| || ||||||| | ||||||  |||| | ||||||||||||||  |  |    
T  15949239 tgagattaatagggcgtaaaacttgttaggattagagttccttgatcaagcgtcgcatataacctaatgac--catacatggattctagcttttctttga 15949336  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    ||||||||| |||| ||||||||    
T  15949337 tattatcacatatccctcgacaa 15949359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 15914718 - 15914838
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||||||||||| || || |||| | ||||||  |||| | ||||||||||||||  |  |    
T  15914718 tgagattaatagggcgtaaaacttgttaggattagagttccttgatcaagcgtcgcacataacctaatgac--catacatggattctagcttttctttga 15914815  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    ||||||||| |||| ||||||||    
T  15914816 tattatcacatatccctcgacaa 15914838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 26601992 - 26602112
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||||||||| ||||||||| ||||||||||| || |||||||||||||| || || |||| | |||||  ||||| | ||||||||||||||  |  |    
T  26601992 tgagattaatagggcgtaaaacttgttaggattagaattccttgatcaagcgtcacacataacctaatga--acatacatggattctagcttttctttga 26602089  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    |||||||||||||| ||||||||    
T  26602090 tattatcacgtatccctcgacaa 26602112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 36875618 - 36875745
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||||| |||||||||||||    
T  36875618 ataaaattgagattaatagggcgtaaaacttgttaggattggagttccttgatcgagcgtcacacgtaacctaatga--tcatatatggattctagcttt 36875715  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  36875716 tctttgatattatcacgtatccctcgacaa 36875745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 19089888 - 19090008
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||| ||||| ||||||||| ||||||||||| ||||||||||||||||| || || |||| | ||||||  |||| | |||||||| |||||  |  |    
T  19089888 tgagagtaatagggcgtaaaacttgttaggattagagttccttgatcaagcgtcacacataacctaatgac--catacatggattctaacttttctttga 19089985  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    |||||||||||||| ||||||||    
T  19089986 tattatcacgtatccctcgacaa 19090008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 2446719 - 2446846
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | |||||||||||||    
T  2446719 ataaaattgagattaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 2446816  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  2446817 tctttgatattatcacgtatccctcgacaa 2446846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 3924242 - 3924115
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | |||||||||||||    
T  3924242 ataaaattgagattaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcacacgtaacctaatga--tcatacatggattctagcttt 3924145  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  3924144 tctttgatattatcacgtatccctcgacaa 3924115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 5050061 - 5049934
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | |||||||||||||    
T  5050061 ataaaattgagattaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 5049964  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  5049963 tctttgatattatcacgtatccctcgacaa 5049934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 5056456 - 5056329
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | |||||||||||||    
T  5056456 ataaaattgagattaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 5056359  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  5056358 tctttgatattatcacgtatccctcgacaa 5056329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 6795511 - 6795638
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | |||||||||||||    
T  6795511 ataaaattgagattaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 6795608  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  6795609 tctttgatattatcacgtatccctcgacaa 6795638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 8185541 - 8185414
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | |||||   |||| | |||||||||||||    
T  8185541 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 8185444  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  8185443 tctttgatattatcacgtatccctcgacaa 8185414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 8193101 - 8192974
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | |||||   |||| | |||||||||||||    
T  8193101 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 8193004  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  8193003 tctttgatattatcacgtatccctcgacaa 8192974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 48353629 - 48353502
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | |||||   |||| | |||||||||||||    
T  48353629 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 48353532  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  48353531 tctttgatattatcacgtatccctcgacaa 48353502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 6021013 - 6020886
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | |||||   |||| | |||||||||||||    
T  6021013 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagcgtcacacgtaacctaatga--tcatacatggattctagcttt 6020916  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  |||||||||| |||| ||||||||    
T  6020915 tctttgatattatcacatatccctcgacaa 6020886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 37026128 - 37026178
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagc 144  Q
    ||||||||||||||||| ||| ||||||||||| |||||||||||||||||    
T  37026128 tgagattaataaggcgtgaaacttgttaggattagagttccttgatcaagc 37026178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 48347245 - 48347118
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||| | ||| ||||||||||| ||||||||||||||||| || ||  ||| | |||||   |||| | |||||||||||||    
T  48347245 ataaaattgagattaatagggcatgaaacttgttaggattagagttccttgatcaagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 48347148  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  48347147 tctttgatattatcacgtatccctcgacaa 48347118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 14298973 - 14299026
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatc 140  Q
    |||||| ||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  14298973 ataaaattgagattaatagggcgtaaaacttgttaggattagagttccttgatc 14299026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 1379027 - 1379147
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | |||||||||||| |  |  |    
T  1379027 tgagattaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcgcacgtaacctaatga--gcatacatggattctagcttgtctttga 1379124  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    |||||||||||||| ||||||||    
T  1379125 tattatcacgtatccctcgacaa 1379147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 1948775 - 1948655
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||||||||| ||||| ||| ||||||||||| ||||||||| ||||||| || || |||| | ||||||  |||| | ||||||||| ||||  |  |    
T  1948775 tgagattaatagggcgtgaaacttgttaggattagagttccttaatcaagcgtcacacataacctaatgac--catacatggattctagattttctttga 1948678  T
Q  194 tattatcacgtatcactcgacaa 216  Q
     ||||||||||||| ||||||||    
T  1948677 gattatcacgtatccctcgacaa 1948655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 8142588 - 8142468
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | |||||||||||| |  |  |    
T  8142588 tgagattaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcgcacgtaacctaatga--gcatacatggattctagcttgtctttga 8142491  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    |||||||||||||| ||||||||    
T  8142490 tattatcacgtatccctcgacaa 8142468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 9643058 - 9642938
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||||||| | ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | ||||||||||||||  |  |    
T  9643058 tgagattaacagggcgtaaaacttgttaggattagagttccttgatcgagcgtcacacgtaacctaatga--tcatacatggattctagcttttctttga 9642961  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    |||||||||||||| ||||||||    
T  9642960 tattatcacgtatccctcgacaa 9642938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 39432987 - 39433107
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    |||||||||||||| || ||| ||||||||||| ||||||||||||||||| || ||  ||| | |||||   |||| | | ||||||||||||  |  |    
T  39432987 tgagattaataaggtgtgaaacttgttaggattagagttccttgatcaagcgtcacacgtaacctaatga--tcatacatgaattctagcttttctttga 39433084  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    |||||||||||||| ||||||||    
T  39433085 tattatcacgtatccctcgacaa 39433107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 219
Target Start/End: Complemental strand, 8881458 - 8881356
Alignment:
Q  117 tgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatctatattatcacgtatcactcgacaa 216  Q
    |||| ||||| |||||| |  ||||||||||  |||||  | ||||| || ||||| |||||||||||||| ||| |||||||||||||||  |||||||    
T  8881458 tgttgggattagagttcgtcaatcaagcatcaaatatatcctaatgatcatatatatggattctagctttttatcgatattatcacgtatcgttcgacaa 8881359  T
Q  217 tat 219  Q
    |||    
T  8881358 tat 8881356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 14287788 - 14287841
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatc 140  Q
    |||||| ||||||||||| ||||||||  ||||||||||| |||||||||||||    
T  14287788 ataaaattgagattaatagggcgtaaatcttgttaggattagagttccttgatc 14287841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 202
Target Start/End: Original strand, 8138937 - 8138979
Alignment:
Q  160 atgaccacatatacggattctagcttttaatctatattatcac 202  Q
    |||| |||||| |||||||||||||||||||| ||||||||||    
T  8138937 atgatcacataaacggattctagcttttaatcgatattatcac 8138979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 225
Target Start/End: Complemental strand, 21901298 - 21901201
Alignment:
Q  128 gagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatctatattatcacgtatcactcgacaatattcttcg 225  Q
    |||||||||||| |||| ||  | |||||| ||| | |||||||| |||||||||| ||| | | ||||||||||||||| ||| |||| ||| ||||    
T  21901298 gagttccttgattaagcgtcaaacataatctaataatcacatatatggattctagcgttttaccgatattatcacgtatcgctcaacaagattattcg 21901201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 216
Target Start/End: Original strand, 45433652 - 45433786
Alignment:
Q  82 caagaataaaagt-gagattaataaggcgtaaaat-ttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattc 179  Q
    ||||| ||||||| |||| |||||||||||||||  ||||||||||| ||||||||| ||||||| || ||  ||| | ||||||  |||| | ||||||    
T  45433652 caagagtaaaagttgagagtaataaggcgtaaaaacttgttaggattagagttccttaatcaagcgtcacacgtaacctaatgac--catacatggattc 45433749  T
Q  180 tagcttttaatctatattatcacgtatcactcgacaa 216  Q
    ||| ||||  |  ||||||||| ||||| ||||||||    
T  45433750 tagattttctttgatattatcatgtatccctcgacaa 45433786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 20651347 - 20651144
Alignment:
Q  13 gacatcaaatatcattttaagttaaa-gattaattggtttgtttgtttagaaactatgtaaactactttgcaagaataaaagt-gagattaataaggcgt 110  Q
    |||| ||||||||||||||||||||| ||||  ||| ||||||||||||  |||||||| ||||| ||||||||||||||||| ||||||||||||||||    
T  20651347 gacaccaaatatcattttaagttaaaagattggttg-tttgtttgttta--aactatgtgaactaatttgcaagaataaaagttgagattaataaggcgt 20651251  T
Q  111 aaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatctatattatcacgtatcact 210  Q
     ||| | ||||||||| |||||||||||||||||||| ||  ||||  |||||   ||||||||||||||| |||||  |  ||||||||||||||| ||    
T  20651250 gaaactcgttaggattagagttccttgatcaagcatcacacgtaatttaatga--tcatatacggattctaccttttctttgatattatcacgtatccct 20651153  T
Q  211 cgacaatat 219  Q
     ||||||||    
T  20651152 tgacaatat 20651144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 101 - 216
Target Start/End: Original strand, 2785790 - 2785905
Alignment:
Q  101 aataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatctatattatc 200  Q
    |||| |||||||||  |||||||||| ||||| ||||| |||||||| ||||||| |  ||||||||||||||  |||||||||||||||| ||||||||    
T  2785790 aatatggcgtaaaacatgttaggattagagtttcttgaccaagcatcacatataaccatatgaccacatatacatattctagcttttaatcgatattatc 2785889  T
Q  201 acgtatcactcgacaa 216  Q
    ||||||| ||||||||    
T  2785890 acgtatccctcgacaa 2785905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 32746443 - 32746570
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||||||| || || |||| | ||||||  |||| | |||||||||||||    
T  32746443 ataaaattgagattaatagggcgtaaaacttgttaggattagagttccttgatcaagcgtcacacataacctaatgac--catacatggattctagcttt 32746540  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  32746541 tctttgatattatcacgtatccctcgacaa 32746570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 4311628 - 4311508
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||||||||| | || || |||| | ||||||  |||| | ||||||||||||||  |  |    
T  4311628 tgagattaatagggcgtaaaacttgttaggattagagttccttgatcaatcgtcgcacataacctaatgac--catacatggattctagcttttctttga 4311531  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    |||||||||||||| ||||||||    
T  4311530 tattatcacgtatccctcgacaa 4311508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 86 - 216
Target Start/End: Complemental strand, 10941454 - 10941326
Alignment:
Q  86 aataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagctt 185  Q
    ||||||| ||||||||||||||||| ||| ||||||||||| ||||||||| ||||||| || ||  ||| | ||||||  |||||| |||||||| |||    
T  10941454 aataaaattgagattaataaggcgtgaaacttgttaggattagagttccttaatcaagcgtcacacgtaacctaatgac--catatatggattctaactt 10941357  T
Q  186 ttaatctatattatcacgtatcactcgacaa 216  Q
    ||  |  ||||||||||||||| ||||||||    
T  10941356 ttctttgatattatcacgtatccctcgacaa 10941326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 13015066 - 13015186
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||||||| | ||||||||| ||||||||||| ||||| ||||||||||| || || |||| | ||||||  |||| | ||||||||||||||  |  |    
T  13015066 tgagattaacagggcgtaaaacttgttaggattagagtttcttgatcaagcgtcacacataacctaatgac--catacatggattctagcttttctttga 13015163  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    |||||||||||||| ||||||||    
T  13015164 tattatcacgtatccctcgacaa 13015186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 24179147 - 24179274
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | |||||   |||| | |||||||||||||    
T  24179147 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagcgtcacacgtaacctaatga--tcatacatggattctagcttt 24179244  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  24179245 tctttgatattatcacgtatccctcgacaa 24179274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 27502116 - 27501989
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | |||||   |||| | |||||||||||||    
T  27502116 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 27502019  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  27502018 tctttgatattatcacgtatccctcgacaa 27501989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 225
Target Start/End: Original strand, 4590907 - 4591004
Alignment:
Q  128 gagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatctatattatcacgtatcactcgacaatattcttcg 225  Q
    ||||||||||||||||||||  |||||||| ||| | |||||||| |||||||||| ||| | | ||||||||||||||| ||| |||| ||| ||||    
T  4590907 gagttccttgatcaagcatcaaatataatctaataatcacatatatggattctagcgttttaccgatattatcacgtatcgctcaacaagattattcg 4591004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 216
Target Start/End: Original strand, 25692035 - 25692229
Alignment:
Q  22 tatcattttaagttaaagattaattggtttgtttgtt-tagaaactatgtaaactactttgcaagaataaaagtg-agattaataaggcgtaaaatttgt 119  Q
    |||||||||||||||| |||||||||||| ||||||| || |||||| || |||||   | | ||||||||| || ||| ||||||||||||||||  ||    
T  25692035 tatcattttaagttaaggattaattggtt-gtttgttgtaaaaactacgtcaactaaaatacgagaataaaaatggagagtaataaggcgtaaaatc-gt 25692132  T
Q  120 taggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatctatattatcacgtatcactcgacaa 216  Q
    | | ||| |||||| || | ||||| ||  |||||| | ||||| ||||||||||||||||| ||||| | | ||| |||||| |||||||| ||||    
T  25692133 tggaattagagttcgttaaccaagcgtcgaatataacctaatgatcacatatacggattctacctttttaccgatactatcacatatcactcaacaa 25692229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 6036339 - 6036466
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| || |   ||| | |||||   |||| | |||||||||||||    
T  6036339 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagcgtcactcgtaacctaatga--tcatacatggattctagcttt 6036436  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  6036437 tctttgatattatcacgtatccctcgacaa 6036466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 43931654 - 43931712
Alignment:
Q  86 aataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagc 144  Q
    ||||||| ||||||||||||||||| ||| ||||||||||| ||||||||| |||||||    
T  43931654 aataaaattgagattaataaggcgtgaaacttgttaggattagagttccttaatcaagc 43931712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 216
Target Start/End: Complemental strand, 20952978 - 20952776
Alignment:
Q  13 gacatcaaatatcattttaagttaaa-gattaattggtttgtttgtttagaaactatgtaaactactttgcaagaataaaag-tgagattaataaggcgt 110  Q
    |||| ||||||||||| ||||||||| || |||||| ||||||| ||| | ||||| || ||||| |||||||||||||||| ||||| |||||||||||    
T  20952978 gacaccaaatatcattctaagttaaaagagtaattg-tttgtttcttt-gcaactaagttaactaatttgcaagaataaaagttgagagtaataaggcgt 20952881  T
Q  111 aaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatctatattatcacgtatcact 210  Q
    ||||   ||| | ||| |||||||||||| |||| ||  | |||| | ||| | | |||||| ||||||||||  || | | ||||||||||||||| ||    
T  20952880 aaaa-acgttggaattagagttccttgattaagcgtcaaacataacctaataatcgcatatatggattctagcgctttaccgatattatcacgtatcgct 20952782  T
Q  211 cgacaa 216  Q
    | ||||    
T  20952781 caacaa 20952776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 218
Target Start/End: Complemental strand, 9570697 - 9570568
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||||||| ||||||||||| || |||||||||| ||| || ||  ||| | |||||   |||| | |||||||||||||    
T  9570697 ataaaattgagattaatagggcgtaaaacttgttaggattagaattccttgatcgagcgtcacacgtaacctaatga--tcatacatggattctagcttt 9570600  T
Q  187 taatctatattatcacgtatcactcgacaata 218  Q
    |  |  ||||||||||||||| ||| ||||||    
T  9570599 tctttgatattatcacgtatccctcaacaata 9570568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 218
Target Start/End: Complemental strand, 9577199 - 9577070
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||||||| ||||||||||| || |||||||||| ||| || ||  ||| | |||||   |||| | |||||||||||||    
T  9577199 ataaaattgagattaatagggcgtaaaacttgttaggattagaattccttgatcgagcgtcacacgtaacctaatga--tcatacatggattctagcttt 9577102  T
Q  187 taatctatattatcacgtatcactcgacaata 218  Q
    |  |  ||||||||||||||| ||| ||||||    
T  9577101 tctttgatattatcacgtatccctcaacaata 9577070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 140
Target Start/End: Original strand, 41353941 - 41353987
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatc 140  Q
    ||||||||||| | ||||||| ||||||||||| |||||||||||||    
T  41353941 tgagattaataggacgtaaaacttgttaggattagagttccttgatc 41353987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 4e-25; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 102 - 216
Target Start/End: Original strand, 42747225 - 42747338
Alignment:
Q  102 ataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatctatattatca 201  Q
    ||||||||||||||| ||||||||| |||||| | || ||||| || |||||| || ||||||||||||||||||||||||| ||||||| |||||||||    
T  42747225 ataaggcgtaaaatt-gttaggattagagttcgtcgaccaagcttcacatatattctaatgaccacatatacggattctagcctttaatcgatattatca 42747323  T
Q  202 cgtatcactcgacaa 216  Q
     ||||||| ||||||    
T  42747324 tgtatcacccgacaa 42747338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 5876298 - 5876418
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||||||||||| || || |||| | ||||||  |||| | ||||||||| ||||  |  |    
T  5876298 tgagattaatagggcgtaaaacttgttaggattagagttccttgatcaagcgtcgcacataacctaatgac--catacatggattctagattttctttga 5876395  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    |||||||||||||| ||||||||    
T  5876396 tattatcacgtatccctcgacaa 5876418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 22360044 - 22360164
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||||||||||| || ||  ||| | ||||||  |||| | ||||||||||||||  |  |    
T  22360044 tgagattaatagggcgtaaaacttgttaggattagagttccttgatcaagcgtcacacgtaacctaatgac--catacatggattctagcttttctttga 22360141  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    |||||||||||||| ||||||||    
T  22360142 tattatcacgtatccctcgacaa 22360164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 40958766 - 40958639
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||||| | ||||||||||| ||||||||||||||||| || || |||| | ||||||  |||| | |||||||||||||    
T  40958766 ataaaattgagattaatagggcgtaacacttgttaggattagagttccttgatcaagcgtcacacataacctaatgac--catacatggattctagcttt 40958669  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||  ||||||||    
T  40958668 tctttgatattatcacgtattcctcgacaa 40958639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 216
Target Start/End: Original strand, 37335267 - 37335400
Alignment:
Q  84 agaataaaagtgagatta-ataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctag 182  Q
    |||||||||  ||||||| ||||| |||||||  |||||||||  || ||| |||| ||||| |  ||||||  |  |||||||||||||||||||||||    
T  37335267 agaataaaaacgagattagataagacgtaaaaactgttaggataagatttcgttgaccaagctttgcatatatccttatgaccacatatacggattctag 37335366  T
Q  183 cttttaatctatattatcacgtatcactcgacaa 216  Q
     |||||||| |||||||||| |||||||||||||    
T  37335367 attttaatcgatattatcacatatcactcgacaa 37335400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 143
Target Start/End: Complemental strand, 12505988 - 12505858
Alignment:
Q  13 gacatcaaatatcattttaagttaaagattaattggtttgtttgtttagaaactatgtaaactactttgc-aagaataaaagtgagattaataaggcgta 111  Q
    |||| |||||| ||||||||||||||   || || | |||||| ||||||||||| || |||||  |||| || ||||||  |||||||||||||||||     
T  12505988 gacaccaaataccattttaagttaaaagatagtttg-ttgtttatttagaaactaagttaactatgttgcgaataataaagttgagattaataaggcgtg 12505890  T
Q  112 aaatttgttaggatttgagttccttgatcaag 143  Q
    ||| ||||||||||| ||||||||||||||||    
T  12505889 aaacttgttaggattagagttccttgatcaag 12505858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 22313910 - 22314030
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||||||||||| || ||  ||| | ||||||  | || | ||||||||||||||  |  |    
T  22313910 tgagattaatagggcgtaaaacttgttaggattagagttccttgatcaagcgtcacacgtaacctaatgac--cgtacatggattctagcttttctttga 22314007  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    |||||||||||||| ||||||||    
T  22314008 tattatcacgtatccctcgacaa 22314030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 2438873 - 2438931
Alignment:
Q  86 aataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagc 144  Q
    ||||||||||||||||||||||||| ||| ||||||||||| ||||||||| |||||||    
T  2438873 aataaaagtgagattaataaggcgtgaaacttgttaggattagagttccttaatcaagc 2438931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 2957932 - 2958059
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | |||||   |||| | |||||||||||||    
T  2957932 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 2958029  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  2958030 tctttgatattatcacgtatccctcgacaa 2958059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 2966401 - 2966528
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | |||||   |||| | |||||||||||||    
T  2966401 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 2966498  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  2966499 tctttgatattatcacgtatccctcgacaa 2966528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 34357437 - 34357310
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | |||||||||||||    
T  34357437 ataaaattgagattaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 34357340  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  34357339 tctttgatattatcacgtatccctcgacaa 34357310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 34359228 - 34359101
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | |||||||||||||    
T  34359228 ataaaattgagattaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 34359131  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  34359130 tctttgatattatcacgtatccctcgacaa 34359101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 225
Target Start/End: Original strand, 9843461 - 9843558
Alignment:
Q  128 gagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatctatattatcacgtatcactcgacaatattcttcg 225  Q
    ||||||||||||||||||||  |||||||| ||| | |||||||| |||||||||| ||| | | ||||||||||||||| ||| |||| ||| ||||    
T  9843461 gagttccttgatcaagcatcaaatataatctaataatcacatatatggattctagcgttttaccgatattatcacgtatcgctcaacaagattattcg 9843558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 29980539 - 29980659
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | ||||||||||||||  |  |    
T  29980539 tgagattaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcgcacgtaacctaatga--tcatacatggattctagcttttctttga 29980636  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    |||||||||||||| ||||||||    
T  29980637 tattatcacgtatccctcgacaa 29980659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 30041386 - 30041266
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | ||||||||||||||  |  |    
T  30041386 tgagattaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcgcacgtaacctaatga--tcatacatggattctagcttttctttga 30041289  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    |||||||||||||| ||||||||    
T  30041288 tattatcacgtatccctcgacaa 30041266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 42150899 - 42151019
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||| ||||| ||||||||| ||||||||||| ||||||||| ||||||| || || |||| | ||||||  |||| | ||||||||| ||||  |  |    
T  42150899 tgagagtaatagggcgtaaaacttgttaggattagagttccttaatcaagcgtcacacataacctaatgac--catacatggattctagtttttctttga 42150996  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    |||||||||||||| ||||||||    
T  42150997 tattatcacgtatccctcgacaa 42151019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 25894798 - 25894671
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | |||||   |||| |  ||||||||||||    
T  25894798 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagcgtcgcacgtaacctaatga--tcatacatcgattctagcttt 25894701  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  25894700 tctttgatattatcacgtatccctcgacaa 25894671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 34738326 - 34738394
Alignment:
Q  150 atataatccaatgaccacatatacggattctagcttttaatctatattatcacgtatcactcgacaata 218  Q
    |||||| | ||||| |||||||| |||||||| ||||| ||| ||||||||||||||||| ||||||||    
T  34738326 atataacctaatgatcacatatatggattctaactttttatcgatattatcacgtatcacccgacaata 34738394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 29414810 - 29414691
Alignment:
Q  95 gagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatctat 194  Q
    |||| ||||| ||||||||| || |||||||| || || ||||||||||| || || |||| | ||||||  |||| | ||||||||||||||  |  ||    
T  29414810 gagagtaatagggcgtaaaacttattaggattagaatttcttgatcaagcgtcacacataacctaatgac--catacatggattctagcttttctttgat 29414713  T
Q  195 attatcacgtatcactcgacaa 216  Q
    ||||||||||||| ||||||||    
T  29414712 attatcacgtatccctcgacaa 29414691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 4973636 - 4973693
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagc 144  Q
    |||||| |||||||||||||| || ||| ||||||||||  |||||||||||||||||    
T  4973636 ataaaattgagattaataaggggtgaaacttgttaggatcagagttccttgatcaagc 4973693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 19853561 - 19853497
Alignment:
Q  152 ataatccaatgaccacatatacggattctagcttttaatctatattatcacgtatcactcgacaa 216  Q
    |||||| ||| | |||||||| |||||||||| ||| | | ||||||||||||||||||| ||||    
T  19853561 ataatctaataatcacatatatggattctagcgttttaccgatattatcacgtatcactcaacaa 19853497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 49770 - 49890
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||| ||||||| || || |||| | ||||||  |||| ||||||||||||||||  |  |    
T  49770 tgagattaatagggcgtaaaacttgttaggattagagttccttcatcaagcgtcgcacataacctaatgac--catacacggattctagcttttctttga 49867  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    |||||||||||||| ||||||||    
T  49868 tattatcacgtatccctcgacaa 49890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 32328642 - 32328515
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||||||| | |||||   |||| | |||||||||||||    
T  32328642 ataaaattgagattaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcacatataacctaatga--tcatacatggattctagcttt 32328545  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  32328544 tctttgatattatcacgtatccctcgacaa 32328515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 1428572 - 1428445
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||||||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | |||||||||||||    
T  1428572 ataaaattgagattaataaggcgtaaaacttgttaggattagagttccttgatcgagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 1428475  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  1428474 tctttgatattatcacgtatccctcgacaa 1428445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 31547968 - 31548095
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | ||||| |||| ||  |||||||||||||    
T  31547968 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagcgtcacacgtaacctaatgatcacacat--ggattctagcttt 31548065  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  31548066 tctttgatattatcacgtatccctcgacaa 31548095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 4020384 - 4020257
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | |||||   |||| | |||||||||||||    
T  4020384 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 4020287  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  4020286 tctttgatattatcacgtatccctcgacaa 4020257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 4026810 - 4026683
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | |||||   |||| | |||||||||||||    
T  4026810 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 4026713  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  4026712 tctttgatattatcacgtatccctcgacaa 4026683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 11058299 - 11058172
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | |||||||||||||    
T  11058299 ataaaattgagattaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 11058202  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  11058201 tctttgatattatcacgtatccctcgacaa 11058172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 29906962 - 29907020
Alignment:
Q  86 aataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagc 144  Q
    ||||||| ||||||||||||||||| ||| ||||||||||| |||||||||||||||||    
T  29906962 aataaaattgagattaataaggcgtgaaacttgttaggattagagttccttgatcaagc 29907020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 30117418 - 30117360
Alignment:
Q  86 aataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagc 144  Q
    ||||||| ||||||||||||||||| ||| ||||||||||| |||||||||||||||||    
T  30117418 aataaaattgagattaataaggcgtgaaacttgttaggattagagttccttgatcaagc 30117360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 34648873 - 34649000
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | |||||   |||| | |||||||||||||    
T  34648873 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 34648970  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  34648971 tctttgatattatcacgtatccctcgacaa 34649000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 34655324 - 34655451
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | |||||   |||| | |||||||||||||    
T  34655324 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 34655421  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  34655422 tctttgatattatcacgtatccctcgacaa 34655451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 34711706 - 34711579
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | |||||||||||||    
T  34711706 ataaaattgagattaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 34711609  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  34711608 tctttgatattatcacgtatccctcgacaa 34711579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 13671959 - 13671839
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    |||||||||||| |||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | |||||   |||| | ||||||||||||||  |  |    
T  13671959 tgagattaataatgcgtgaaacttgttaggattagagttccttgatcaagcgtcacacgtaacctaatga--tcatacatggattctagcttttctttga 13671862  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    |||||||||||||| ||||||||    
T  13671861 tattatcacgtatccctcgacaa 13671839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 4738472 - 4738345
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | |||||   |||| | |||||||||||||    
T  4738472 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 4738375  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||| ||||| ||||||||    
T  4738374 tctttgatattatcatgtatccctcgacaa 4738345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 7069851 - 7069724
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | |||||   |||| | |||||||||||||    
T  7069851 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 7069754  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||| ||||| ||||||||    
T  7069753 tctttgatattatcatgtatccctcgacaa 7069724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 144
Target Start/End: Complemental strand, 1167704 - 1167579
Alignment:
Q  19 aaatatcattttaagttaaagattaattggtttgtttgtttagaaactatgtaaactactttgcaagaataaaag--tgagattaataaggcgtaaaatt 116  Q
    ||||||||||||||||||||| |  ||||   ||||||||| ||||||| || ||||| ||| | | | ||||||  ||||||||||||||||| ||| |    
T  1167704 aaatatcattttaagttaaaggtagattg--atgtttgttttgaaactaagttaactatttttcgaaagtaaaagtttgagattaataaggcgtgaaact 1167607  T
Q  117 tgttaggatttgagttccttgatcaagc 144  Q
    |||||||||| || ||| ||||||||||    
T  1167606 tgttaggattagaattctttgatcaagc 1167579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 9864909 - 9864852
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagc 144  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| |||||||||||||||||    
T  9864909 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagc 9864852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 9846670 - 9846721
Alignment:
Q  165 cacatatacggattctagcttttaatctatattatcacgtatcactcgacaa 216  Q
    ||||||||||||||||||| ||| ||| ||||||||||||||| ||||||||    
T  9846670 cacatatacggattctagcattttatcgatattatcacgtatcgctcgacaa 9846721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 7062632 - 7062578
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatca 141  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||    
T  7062632 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatca 7062578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 22870435 - 22870485
Alignment:
Q  159 aatgaccacatatacggattctagcttttaatctatattatcacgtatcac 209  Q
    |||||||||||||||||||||| || ||||||| ||||||||| |||||||    
T  22870435 aatgaccacatatacggattcttgcctttaatcgatattatcatgtatcac 22870485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 4186758 - 4186811
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatc 140  Q
    |||||| ||||||||||| |||||| || ||||||||||| |||||||||||||    
T  4186758 ataaaattgagattaatagggcgtagaacttgttaggattagagttccttgatc 4186811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 21262716 - 21262596
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||| ||||| ||||||||| ||||||||||| |||||||||||| |||| || ||  ||| | |||||   |||| | ||||||||| ||||  |  |    
T  21262716 tgagagtaatagggcgtaaaacttgttaggattagagttccttgattaagcgtcacacgtaacctaatga--tcatacatggattctagtttttctttga 21262619  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    |||||||||||||| ||||||||    
T  21262618 tattatcacgtatccctcgacaa 21262596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 27670174 - 27670223
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaag 143  Q
    |||||||||||| | || ||| ||||||||||| ||||||||||||||||    
T  27670174 tgagattaataaagtgtgaaacttgttaggattagagttccttgatcaag 27670223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0936 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0936
Description:

Target: scaffold0936; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 79 - 216
Target Start/End: Complemental strand, 3422 - 3286
Alignment:
Q  79 ttgcaagaataaaagt-gagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggat 177  Q
    |||||||| ||||||| |||||||||||||||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | ||| ||  |||| | ||||    
T  3422 ttgcaagagtaaaagttgagattaataaggcgtgaaacttgttaggattagagttccttgatcaagcttcacacttaacctaattac--catacatggat 3325  T
Q  178 tctagcttttaatctatattatcacgtatcactcgacaa 216  Q
    ||||||||||  |  ||||||||||||||| ||||||||    
T  3324 tctagcttttctttgatattatcacgtatccctcgacaa 3286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 5154 - 5027
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | |||||||||||||    
T  5154 ataaaattgagattaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 5057  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  5056 tctttgatattatcacgtatccctcgacaa 5027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 7311422 - 7311549
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | |||||||||||||    
T  7311422 ataaaattgagattaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 7311519  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  7311520 tctttgatattatcacgtatccctcgacaa 7311549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 8013469 - 8013342
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | |||||||||||||    
T  8013469 ataaaattgagattaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 8013372  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  8013371 tctttgatattatcacgtatccctcgacaa 8013342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 11358342 - 11358215
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | |||||   |||| | |||||||||||||    
T  11358342 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagcgtcacacgtaacctaatga--tcatacatggattctagcttt 11358245  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  11358244 tctttgatattatcacgtatccctcgacaa 11358215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 219
Target Start/End: Complemental strand, 26250733 - 26250610
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||||||||||||||| ||||||||||||||| ||||||||| ||||||| || ||  ||||| ||| ||  |||| | || || ||||||||  |  |    
T  26250733 tgagattaataaggcgtgaaatttgttaggattagagttccttaatcaagcgtcacacgtaatctaataac--catacatggtttatagcttttctttga 26250636  T
Q  194 tattatcacgtatcactcgacaatat 219  Q
    |||||||||||||| |||||||||||    
T  26250635 tattatcacgtatccctcgacaatat 26250610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 36005631 - 36005504
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | |||||||||||||    
T  36005631 ataaaattgagattaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 36005534  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  36005533 tctttgatattatcacgtatccctcgacaa 36005504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 36021948 - 36021821
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | |||||||||||||    
T  36021948 ataaaattgagattaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 36021851  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  36021850 tctttgatattatcacgtatccctcgacaa 36021821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 36076040 - 36076167
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | |||||||||||||    
T  36076040 ataaaattgagattaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 36076137  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  36076138 tctttgatattatcacgtatccctcgacaa 36076167  T

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Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 36425879 - 36425752
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| || ||  ||| | |||||   |||| | |||||||||||||    
T  36425879 ataaaattgagattaatagggcgtgaaacttgttaggattagagttccttgatcaagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 36425782  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  36425781 tctttgatattatcacgtatccctcgacaa 36425752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 41242265 - 41242138
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | |||||||||||||    
T  41242265 ataaaattgagattaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 41242168  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  41242167 tctttgatattatcacgtatccctcgacaa 41242138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 225
Target Start/End: Complemental strand, 7934036 - 7933939
Alignment:
Q  128 gagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatctatattatcacgtatcactcgacaatattcttcg 225  Q
    ||||||||||||||||||||  |||||||| ||| | |||||||| |||||||||| ||| | | ||||||||||||||| ||| |||| ||| ||||    
T  7934036 gagttccttgatcaagcatcaaatataatctaataatcacatatatggattctagcgttttaccgatattatcacgtatcgctcaacaagattattcg 7933939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 1238294 - 1238414
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatcta 193  Q
    ||||| |||||  |||||||| ||||||||||| ||||||||||||||||| || || |||| |  |||||  |||| | ||||||||||||||  |  |    
T  1238294 tgagagtaatagagcgtaaaacttgttaggattagagttccttgatcaagcgtcacaaataacctgatgac--catacatggattctagcttttctttga 1238391  T
Q  194 tattatcacgtatcactcgacaa 216  Q
    |||||||||||||| ||||||||    
T  1238392 tattatcacgtatccctcgacaa 1238414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 6464725 - 6464598
Alignment:
Q  87 ataaaagtgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttt 186  Q
    |||||| ||||||||||| ||||||||| | ||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | |||||||||||||    
T  6464725 ataaaattgagattaatagggcgtaaaactcgttaggattagagttccttgatcgagcgtcgcacgtaacctaatga--tcatacatggattctagcttt 6464628  T
Q  187 taatctatattatcacgtatcactcgacaa 216  Q
    |  |  ||||||||||||||| ||||||||    
T  6464627 tctttgatattatcacgtatccctcgacaa 6464598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 29337090 - 29337034
Alignment:
Q  160 atgaccacatatacggattctagcttttaatctatattatcacgtatcactcgacaa 216  Q
    |||| |||||||||| |||||| ||||||||| ||||||||||||||||| ||||||    
T  29337090 atgatcacatatacgaattctaacttttaatcgatattatcacgtatcacccgacaa 29337034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 12768824 - 12768874
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagc 144  Q
    ||||||||||||||||| ||| ||||||||||| |||||| ||||||||||    
T  12768824 tgagattaataaggcgtgaaacttgttaggattagagttctttgatcaagc 12768874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 31017470 - 31017586
Alignment:
Q  100 taataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatctatattat 199  Q
    ||||||||||| ||| | ||||||||| |||||| || ||||||| || ||| ||| | |||||||| ||| | ||||||||  ||||  |  |||||||    
T  31017470 taataaggcgtgaaactagttaggattagagttctttaatcaagcgtcacatgtaacctaatgaccatatacatggattctaatttttctttgatattat 31017569  T
Q  200 cacgtatcactcgacaa 216  Q
    |||||||| ||||||||    
T  31017570 cacgtatccctcgacaa 31017586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 144
Target Start/End: Complemental strand, 45068574 - 45068508
Alignment:
Q  79 ttgcaagaataaaagt-gagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagc 144  Q
    |||||||| ||||||| |||| ||||||  ||||||||||||||||||| |||||| || |||||||    
T  45068574 ttgcaagagtaaaagttgagagtaataaaacgtaaaatttgttaggattagagttctttaatcaagc 45068508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 9774056 - 9774097
Alignment:
Q  175 gattctagcttttaatctatattatcacgtatcactcgacaa 216  Q
    |||||||||| | |||| ||||||||||||||||||||||||    
T  9774056 gattctagctatcaatcaatattatcacgtatcactcgacaa 9774097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 2725 - 2775
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagc 144  Q
    ||||||||||||||||| ||| ||||||||||| |||||||||||||||||    
T  2725 tgagattaataaggcgtgaaacttgttaggattagagttccttgatcaagc 2775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 2702 - 2630
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgacca 166  Q
    ||||| ||||| ||||||||| ||||||||||| |||||||||||| |||| || ||||||| | ||||||||    
T  2702 tgagagtaatagggcgtaaaacttgttaggattagagttccttgattaagcgtcacatataacctaatgacca 2630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 140
Target Start/End: Complemental strand, 9023 - 8977
Alignment:
Q  94 tgagattaataaggcgtaaaatttgttaggatttgagttccttgatc 140  Q
    ||||| ||||| ||||||||| ||||||||||| |||||||||||||    
T  9023 tgagagtaatagggcgtaaaacttgttaggattagagttccttgatc 8977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 216
Target Start/End: Original strand, 12014 - 12133
Alignment:
Q  95 gagattaataaggcgtaaaatttgttaggatttgagttccttgatcaagcatcccatataatccaatgaccacatatacggattctagcttttaatctat 194  Q
    |||| ||||| ||||||||| ||||||||||| ||||||||||||| ||| || ||  ||| | |||||   |||| | ||||||||||||||  |  ||    
T  12014 gagagtaatagggcgtaaaacttgttaggattagagttccttgatcgagcgtcacacgtaacctaatga--tcataaatggattctagcttttctttgat 12111  T
Q  195 attatcacgtatcactcgacaa 216  Q
    ||||||||||||| ||||||||    
T  12112 attatcacgtatccctcgacaa 12133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 15245 - 15293
Alignment:
Q  88 taaaagtgagattaataaggcgtaaaatttgttaggatttgagttcctt 136  Q
    ||||| ||||||||||||||||| ||| ||||||||||| |||||||||    
T  15245 taaaattgagattaataaggcgtgaaacttgttaggattagagttcctt 15293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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