View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7208_low_18 (Length: 239)
Name: NF7208_low_18
Description: NF7208
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7208_low_18 |
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Alignment Details
Target: chr2 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 4 - 224
Target Start/End: Complemental strand, 40994505 - 40994285
Alignment:
| Q |
4 |
cacttaatgtgagtgagaaagcctttgtagtattaaaagggtaaactcatcaagggcttaatgatgtttgtattcccttacaagtgggtggtgtgagatt |
103 |
Q |
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| T |
40994505 |
cacttaatgtgagtgagaaagcctttgtagtattaaaagggtaaactcatcaagggcttaatgatgtttgtattcccttacaagtgggtggtgtgagatt |
40994406 |
T |
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| Q |
104 |
tacaacctacgtaataaaatcatgtttaatgggagcgcttacatgagatcatgacaaaaagaattagaacctcgtgattattagatgcacgtaagaccta |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40994405 |
tacaacctacgtaataaaatcatgtttaatgggagcgcttacatgagatcatgacaaaaagaattagaacctcgtgattattagatgcacgtaagaccta |
40994306 |
T |
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| Q |
204 |
caagtgctaaacaacattaac |
224 |
Q |
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||||||||||||||||||||| |
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| T |
40994305 |
caagtgctaaacaacattaac |
40994285 |
T |
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