View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7208_low_8 (Length: 344)
Name: NF7208_low_8
Description: NF7208
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7208_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 15 - 332
Target Start/End: Complemental strand, 45384143 - 45383826
Alignment:
| Q |
15 |
acatcaggtttataaatgaaaattgctcgttgtgtactttgaccaccgtttttaaaacgaaaactaatccaatcttgattgtattttaactgtttggttt |
114 |
Q |
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| T |
45384143 |
acatcaggtttataaatgaaaattgctcgttgtgtactttgaccaccgtttttaaaacgaaaactaatccaatcttgattgtattttaactgtttggttt |
45384044 |
T |
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| Q |
115 |
tgaattatagtagctttataaacaacccaaaacaacgaggagagaaattattttaaactaattgnnnnnnnnnnnnnnnnnaatggaagagaggagtgaa |
214 |
Q |
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| T |
45384043 |
tgaattatcgtagctttataaacaacccaaaacaacgaggagagaaattattttaaactaattgtttttttcaaattttttgatggaagagaggagtgaa |
45383944 |
T |
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| Q |
215 |
gatcaaaactccaccaaaaatgaaggatttacaacgtataaaatattttatagctttatgaaggatttaaaacaagagcgcataaaatgaaaagtattct |
314 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45383943 |
gatcaaaactccaccaaaaatgaaggatttacaacgtataaaatattttatagttttatgaaggatttaaaacaagagcgcataaaatgaaaagtattct |
45383844 |
T |
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| Q |
315 |
tacaatgaggtagcttca |
332 |
Q |
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|| ||||||| ||||||| |
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| T |
45383843 |
tataatgaggcagcttca |
45383826 |
T |
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