View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7210_high_4 (Length: 267)
Name: NF7210_high_4
Description: NF7210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7210_high_4 |
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Alignment Details
Target: chr3 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 9 - 253
Target Start/End: Complemental strand, 30789688 - 30789444
Alignment:
| Q |
9 |
agcatagatatatccactttaccattgtcatcactctttataattaatttaatggatcaagttgaattcaaagtacaacactactactcaattcaagcct |
108 |
Q |
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| T |
30789688 |
agcatagatatatccactttaccattgtcatcactctttataattaagttaatggatcaagttgaattcaaagtacaacactactactcaattcaagcct |
30789589 |
T |
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| Q |
109 |
ttactatcaacaaacctatgccaattcaaacttagtccaatagttttctgcatagatccatgaatataatagtcaacaatgcatattttcttattaataa |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
30789588 |
ttactatcaacaaacctatgccaattcaaacttagtccaatagttttctgcatagatccatgaatataatagtcaacaatgcatattttcttattaatga |
30789489 |
T |
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| Q |
209 |
tttatatttttggcacattgagtacttacaaagatgttgagcttg |
253 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30789488 |
tttatatttttggcacattgagtacttacaaagatgttgagcttg |
30789444 |
T |
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