View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7212_low_11 (Length: 213)
Name: NF7212_low_11
Description: NF7212
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7212_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 18 - 197
Target Start/End: Original strand, 13285389 - 13285568
Alignment:
| Q |
18 |
attccaaaggaaattaatctcgtactgcatagaaaatcatggcagagaagcatgacatgaatcttacaatagaagtggccctgctacaaagtggtgaaag |
117 |
Q |
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| T |
13285389 |
attccaaaggaaattaatctcgtactgcatagaaaatcatggcagagaagcatgacatgaatcttacaatagaagtggccctgctacaaagtggtgaaag |
13285488 |
T |
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| Q |
118 |
aaaattaaaccttttattaccagaaccatagggcaacaacagtgtacgtttcattcacctttggattagctacacttctt |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13285489 |
aaaattaaaccttttattaccagaaccatagggcaacaacagtgtacgtttcattcacctttggattagctacacttctt |
13285568 |
T |
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