View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7212_low_9 (Length: 229)
Name: NF7212_low_9
Description: NF7212
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7212_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 11102761 - 11102955
Alignment:
| Q |
16 |
aatttctacattccaaactttgtacgtatctgtgggacatgaatcatgcnnnnnnnnnnnnnn-ccttctagtgttgcaagcctagaaataataatgttt |
114 |
Q |
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| T |
11102761 |
aatttctacattccaaactttgtacgtatctgtgggacatgaatcatgcttttttgttttttttccttctagtgttgcaagcctagaaataat---gttt |
11102857 |
T |
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| Q |
115 |
ttctcctccaaatttaaaatgcacttacaagttattttacattacctttctaaaacgatgtgtgagaaatccatcatatcagattaatctttaaatatt |
213 |
Q |
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| T |
11102858 |
ttctcctccaaatttaaaatgcacttacaagttattt-acattacctttctaaaacgatgtgtgagaaatccatcatatcagattaatctttaaatatt |
11102955 |
T |
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