View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7217_low_1 (Length: 507)

Name: NF7217_low_1
Description: NF7217
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7217_low_1
NF7217_low_1
[»] chr1 (62 HSPs)
chr1 (4-491)||(11891895-11892382)
chr1 (65-491)||(11905506-11905929)
chr1 (254-491)||(11882709-11882946)
chr1 (305-489)||(52818440-52818624)
chr1 (322-491)||(11882469-11882638)
chr1 (322-491)||(11891703-11891872)
chr1 (328-477)||(11880174-11880323)
chr1 (425-491)||(11882661-11882727)
chr1 (328-477)||(11902674-11902823)
chr1 (322-491)||(11905314-11905483)
chr1 (328-483)||(11880072-11880227)
chr1 (322-477)||(11902578-11902733)
chr1 (322-384)||(11882384-11882446)
chr1 (425-491)||(11882421-11882487)
chr1 (322-384)||(11891618-11891680)
chr1 (425-491)||(11891655-11891721)
chr1 (322-384)||(52818601-52818663)
chr1 (329-477)||(11902770-11902918)
chr1 (322-382)||(11905279-11905339)
chr1 (328-378)||(11888193-11888243)
chr1 (328-378)||(11888241-11888291)
chr1 (328-378)||(11888289-11888339)
chr1 (328-378)||(11888337-11888387)
chr1 (328-378)||(11888385-11888435)
chr1 (328-378)||(11888433-11888483)
chr1 (328-378)||(11888481-11888531)
chr1 (328-378)||(11888529-11888579)
chr1 (328-378)||(11888577-11888627)
chr1 (328-378)||(11888625-11888675)
chr1 (328-378)||(11888673-11888723)
chr1 (328-378)||(11888721-11888771)
chr1 (328-378)||(11888769-11888819)
chr1 (328-378)||(11888817-11888867)
chr1 (328-378)||(11888865-11888915)
chr1 (328-378)||(11888913-11888963)
chr1 (328-378)||(11888961-11889011)
chr1 (328-378)||(11889009-11889059)
chr1 (328-378)||(11889057-11889107)
chr1 (328-378)||(11889105-11889155)
chr1 (328-378)||(11889153-11889203)
chr1 (328-378)||(11889201-11889251)
chr1 (328-378)||(11889249-11889299)
chr1 (328-378)||(11889297-11889347)
chr1 (328-378)||(11889345-11889395)
chr1 (328-378)||(11889393-11889443)
chr1 (328-378)||(11889441-11889491)
chr1 (328-378)||(11889489-11889539)
chr1 (245-315)||(52818287-52818357)
chr1 (434-491)||(52819097-52819154)
chr1 (428-480)||(11882336-11882388)
chr1 (428-480)||(11891570-11891622)
chr1 (328-384)||(52818799-52818855)
chr1 (419-474)||(52818842-52818897)
chr1 (322-384)||(11882336-11882398)
chr1 (322-384)||(11882432-11882494)
chr1 (322-384)||(11891570-11891632)
chr1 (322-384)||(11891666-11891728)
chr1 (322-384)||(11905469-11905531)
chr1 (332-378)||(52818851-52818897)
chr1 (328-381)||(11889630-11889683)
chr1 (338-378)||(11889537-11889577)
chr1 (322-378)||(11889777-11889833)
[»] chr4 (1 HSPs)
chr4 (424-468)||(24482211-24482255)
[»] scaffold1918 (1 HSPs)
scaffold1918 (428-483)||(19-74)


Alignment Details
Target: chr1 (Bit Score: 472; Significance: 0; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 472; E-Value: 0
Query Start/End: Original strand, 4 - 491
Target Start/End: Complemental strand, 11892382 - 11891895
Alignment:
Q  4 agatggacatcaaataatttggacagaaagctagttgtttcactttgctccaaatggacgactttattccttgatgaaaactagaacctgaaaacaaata 103  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11892382 agatggccatcaaataatttggacagagagctagttgtttcactttgctccaaatggacgactttattccttgatgaaaactagaacctgaaaacaaata 11892283  T
Q  104 agagtttttgttgattagtacataaaatttaaacatgtgatatgtgtgtgtatgggtgggaaaagatgcaagtgttatgattgcaacaatggtaaactta 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11892282 agagtttttgttgattagtacataaaatttaaacatgtgatatgtgtgtgtatgggtgggaaaagatgcaagtgttatgattgcaataatggtaaactta 11892183  T
Q  204 cataatttatcaccaatggtgatttggtgttgtgaggctagttgtagattggtggtggtggagaagcatagatgtaagctggtggtggaggtgactttac 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11892182 cataatttatcaccaatggtgatttggtgttgtgaggctagttgtagattggtggtggtggagaagcatagatgtaagctggtggtggaggtgactttac 11892083  T
Q  304 tggtgggggaggactcacgtaatggtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagtagggaggatgagaaatgggagatggg 403  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11892082 tggtgggggaggactcacgtaatggtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagttgggaggatgagaaatgggagatggg 11891983  T
Q  404 ggaggaggactttgatagtgataaggaggtggtggagatggagatggaggtgggggagatttgtaatagtaaggaggtggcggtgatg 491  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11891982 ggaggaggactttgatagtgataaggaggtggtggagatggagatggaggtgggggagatttgtaatagtaaggaggtggcggtgatg 11891895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 65 - 491
Target Start/End: Complemental strand, 11905929 - 11905506
Alignment:
Q  65 ctttattccttgatgaaaactagaacctgaaaacaaataagagtttttgttgattagtacataaaatttaaacatgtgatatgtgtgtgtatgggtggga 164  Q
    |||||||||||| ||||| ||||||||||||||||||||  | |||| ||||||||  |||||| |||||||| ||| || ||||| || ||||||||      
T  11905929 ctttattccttggtgaaagctagaacctgaaaacaaatacaaattttagttgattatcacataagatttaaacgtgttatctgtgtatgcatgggtggcg 11905830  T
Q  165 aaagatgcaagtgttatgattgcaacaatggtaaacttacataatttatcaccaatggtgatttggtgttgtgaggctagttgtagattggtggtggtgg 264  Q
        |  ||  |||||||| || || | |||||||||||||| |||||||| |||||||| |||||||||  |||  || | |||||| |||||||||||    
T  11905829 tgcca--catatgttatgaatgtaata-tggtaaacttacatgatttatcatcaatggtgctttggtgttccgagattaatggtagatgggtggtggtgg 11905733  T
Q  265 agaagcatagatgtaagctggtggtggaggtgactttactggtgggggaggactcacgtaatggtatggaggtggaggagatggcgatggtggtggaggg 364  Q
    ||||||||| | |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||    
T  11905732 agaagcataaacgtaaactgatggtggaggagactttactggtgggggaggactcacgtaatggtacggaggtggaggagatggagacggtggtggaggg 11905633  T
Q  365 gatttgtagtagtagggaggatgagaaatgggagatgggggaggaggactttgatagtgataaggaggtggtggagatggagatggaggtgggggagatt 464  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11905632 gatttgtagtagtagggaggatgagaaatgggagatggtggaggaggactttgatagtgataaggaggtggtggagatggagatggaggtgggggagatt 11905533  T
Q  465 tgtaatagtaaggaggtggcggtgatg 491  Q
    |||||||||||||||||||||||||||    
T  11905532 tgtaatagtaaggaggtggcggtgatg 11905506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 254 - 491
Target Start/End: Complemental strand, 11882946 - 11882709
Alignment:
Q  254 ggtggtggtggagaagcatagatgtaagctggtggtggaggtgactttactggtgggggaggactcacgtaatggtatggaggtggaggagatggcgatg 353  Q
    ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||| |||||||    
T  11882946 ggtggtggtggtgaagcatagatataagttggtggtggaggtgactttactggtgggggaggactcacatagtggtaaggaggtggaggagacggcgatg 11882847  T
Q  354 gtggtggaggggatttgtagtagtagggaggatgagaaatgggagatgggggaggaggactttgatagtgataaggaggtggtggagatggagatggagg 453  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  11882846 gtggtggaggggatttgtagtagtagggaggatgagaaatgggagatggtggaggaggactttgatagtggtaaggaggtggtggagatggagatggagg 11882747  T
Q  454 tgggggagatttgtaatagtaaggaggtggcggtgatg 491  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11882746 tgggggagatttgtaatagtaaggaggtggcggtgatg 11882709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 305 - 489
Target Start/End: Original strand, 52818440 - 52818624
Alignment:
Q  305 ggtgggggaggactcacgtaatggtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagtagggaggatgagaaatgggagatgggg 404  Q
    |||||||| |||||||| |||||||| |||||||||||||| | || ||||||||||||||||||||||| |||||||| ||||| | |||||||||| |    
T  52818440 ggtggggggggactcacataatggtaaggaggtggaggagacgccgttggtggtggaggggatttgtagtggtagggagtatgaggagtgggagatggtg 52818539  T
Q  405 gaggaggactttgatagtgataaggaggtggtggagatggagatggaggtgggggagatttgtaatagtaaggaggtggcggtga 489  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||    
T  52818540 gaggaggactttgatagtaataaggaggtggtggagatggagatggaggtggaggtgacttgtaatagtaaggaggtggaggtga 52818624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 322 - 491
Target Start/End: Complemental strand, 11882638 - 11882469
Alignment:
Q  322 gtaatggtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagtagggaggatg-agaaatgggagatgggggaggaggactttgata 420  Q
    ||||| ||| ||||| || || ||||| ||||||||||| || ||||||||||| || || ||||| || |   |||||||| ||||| |||||||  ||    
T  11882638 gtaatagtagggagggggtggggatggtgatggtggtggtggagatttgtagtaatatgg-ggatggaggagatggagatggtggagggggacttttgta 11882540  T
Q  421 gtgataaggaggtggtggagatggagatggaggtgggggagatttgtaatagtaaggaggtggcggtgatg 491  Q
    ||  || ||||||||||| ||||| ||||| ||||| || ||||||||||||||||||||||| |||||||    
T  11882539 gtagtatggaggtggtggtgatggggatggtggtggaggtgatttgtaatagtaaggaggtggtggtgatg 11882469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 322 - 491
Target Start/End: Complemental strand, 11891872 - 11891703
Alignment:
Q  322 gtaatggtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagtagggaggatg-agaaatgggagatgggggaggaggactttgata 420  Q
    ||||| ||| ||||| || || ||||| ||||||||||| || ||||||||||| || || ||||| || |   |||||||| ||||| |||||||  ||    
T  11891872 gtaatagtagggagggggtggggatggtgatggtggtggtggagatttgtagtaatatgg-ggatggaggagatggagatggtggagggggacttttgta 11891774  T
Q  421 gtgataaggaggtggtggagatggagatggaggtgggggagatttgtaatagtaaggaggtggcggtgatg 491  Q
    ||  || ||||||||||| ||||| ||||| ||||| || ||||||||||||||||||||||| |||||||    
T  11891773 gtagtatggaggtggtggtgatggggatggtggtggaggtgatttgtaatagtaaggaggtggtggtgatg 11891703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 328 - 477
Target Start/End: Complemental strand, 11880323 - 11880174
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagtagggaggatgagaaatgggagatgggggaggaggactttgatagtgataa 427  Q
    |||||| |||||||||||||| || |||||||| || |||||||| ||||| || | | | | ||| |||||||| |||||||||  ||  ||||  ||     
T  11880323 gtatggtggtggaggagatggtgaaggtggtgggggagatttgtaatagtaaggtgtacggggaataggagatggaggaggaggagatttgtagtagtat 11880224  T
Q  428 ggaggtggtggagatggagatggaggtgggggagatttgtaatagtaagg 477  Q
    || ||||| |||||||| || || ||||||||||||||||||||||||||    
T  11880223 ggtggtggaggagatggtgaaggtggtgggggagatttgtaatagtaagg 11880174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 425 - 491
Target Start/End: Complemental strand, 11882727 - 11882661
Alignment:
Q  425 taaggaggtggtggagatggagatggaggtgggggagatttgtaatagtaaggaggtggcggtgatg 491  Q
    ||||||||||| || ||||| || |||||||| || |||||||||||||||||||||||||||||||    
T  11882727 taaggaggtggcggtgatggtgagggaggtggaggtgatttgtaatagtaaggaggtggcggtgatg 11882661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 477
Target Start/End: Complemental strand, 11902823 - 11902674
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagtagggaggatgagaaatgggagatgggggaggaggactttgatagtgataa 427  Q
    |||||| |||||||||||||| || |||||||| || |||||||| ||||| || | | | | ||| |||||||| |||||||||  ||  || |  ||     
T  11902823 gtatggtggtggaggagatggtgaaggtggtgggggagatttgtaatagtaaggtgtacggggaataggagatggaggaggaggagatttgtaatagtat 11902724  T
Q  428 ggaggtggtggagatggagatggaggtgggggagatttgtaatagtaagg 477  Q
    || ||||| |||||||| || || ||||||||||||||||||||||||||    
T  11902723 ggtggtggaggagatggtgaaggtggtgggggagatttgtaatagtaagg 11902674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 491
Target Start/End: Complemental strand, 11905483 - 11905314
Alignment:
Q  322 gtaatggtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagtagggaggatgagaaatgggagatgggggaggaggactttgatag 421  Q
    ||||| ||| ||||| || || ||||| ||||||||||| || ||||||||||| || || ||| ||| |  |||||| || ||||| || ||||  |||    
T  11905483 gtaatagtagggagggggtggtgatggtgatggtggtggtggagatttgtagtaatatgggggaggaggagagggagaaggtggaggggggcttttgtag 11905384  T
Q  422 tgataaggaggtggtggagatggagatggaggtgggggagatttgtaatagtaaggaggtggcggtgatg 491  Q
    |  || |||||||| || ||||| ||||| ||||| || |||||||||||||| |||||||| |||||||    
T  11905383 tagtatggaggtggaggcgatggtgatggtggtggaggtgatttgtaatagtagggaggtggtggtgatg 11905314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 483
Target Start/End: Complemental strand, 11880227 - 11880072
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagtagggaggatgagaaatgggagatgggggaggaggactttgatagtgataa 427  Q
    |||||| |||||||||||||| || |||||||| || |||||||| ||||| || | ||| | ||| |||||||| |||||||||  ||  ||||  ||     
T  11880227 gtatggtggtggaggagatggtgaaggtggtgggggagatttgtaatagtaaggtgtatggggaataggagatggaggaggaggagatttgtagtagtat 11880128  T
Q  428 ggaggtggtggagatggagatggaggtgggggagatttgtaatagtaaggaggtgg 483  Q
    || ||||| |||||||| || || || || ||||| |||||||||||||| |||||    
T  11880127 ggtggtggaggagatggtgaaggtgggggaggagacttgtaatagtaaggtggtgg 11880072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 322 - 477
Target Start/End: Complemental strand, 11902733 - 11902578
Alignment:
Q  322 gtaatggtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagtagggaggatgagaaatgggagatgggggaggaggactttgatag 421  Q
    ||||| |||||| |||||||||||||| || |||||||| || |||||||| ||||| || | ||| | ||| |||||||| |||||||||  ||  ||     
T  11902733 gtaatagtatggtggtggaggagatggtgaaggtggtgggggagatttgtaatagtaaggtgtatggggaataggagatggaggaggaggagatttgtaa 11902634  T
Q  422 tgataaggaggtggtggagatggagatggaggtgggggagatttgtaatagtaagg 477  Q
    |  || || ||||| |||||||| || || ||||| ||||| ||||||||||||||    
T  11902633 tagtatggtggtggaggagatggtgaaggtggtggaggagacttgtaatagtaagg 11902578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 322 - 384
Target Start/End: Complemental strand, 11882446 - 11882384
Alignment:
Q  322 gtaatggtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagtagggagg 384  Q
    ||||| ||||||||| ||||| ||||| |||||||||||||| |||||||| |||||||||||    
T  11882446 gtaatagtatggagggggaggtgatggtgatggtggtggaggtgatttgtaatagtagggagg 11882384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 425 - 491
Target Start/End: Complemental strand, 11882487 - 11882421
Alignment:
Q  425 taaggaggtggtggagatggagatggaggtgggggagatttgtaatagtaaggaggtggcggtgatg 491  Q
    |||||||||||||| ||||| ||||| ||||| ||||||||||||||||| ||||| || |||||||    
T  11882487 taaggaggtggtggtgatggtgatggtggtggaggagatttgtaatagtatggagggggaggtgatg 11882421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 322 - 384
Target Start/End: Complemental strand, 11891680 - 11891618
Alignment:
Q  322 gtaatggtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagtagggagg 384  Q
    ||||| ||||||||| ||||| ||||| |||||||||||||| |||||||| |||||||||||    
T  11891680 gtaatagtatggagggggaggtgatggtgatggtggtggaggtgatttgtaatagtagggagg 11891618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 425 - 491
Target Start/End: Complemental strand, 11891721 - 11891655
Alignment:
Q  425 taaggaggtggtggagatggagatggaggtgggggagatttgtaatagtaaggaggtggcggtgatg 491  Q
    |||||||||||||| ||||| ||||| ||||| ||||||||||||||||| ||||| || |||||||    
T  11891721 taaggaggtggtggtgatggtgatggtggtggaggagatttgtaatagtatggagggggaggtgatg 11891655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 322 - 384
Target Start/End: Original strand, 52818601 - 52818663
Alignment:
Q  322 gtaatggtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagtagggagg 384  Q
    ||||| ||| ||||||||||| || || |||||||||||||| ||||||||||||||||||||    
T  52818601 gtaatagtaaggaggtggaggtgacggggatggtggtggaggtgatttgtagtagtagggagg 52818663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 329 - 477
Target Start/End: Complemental strand, 11902918 - 11902770
Alignment:
Q  329 tatggaggtggaggagatggcgatggtggtggaggggatttgtagtagtagggaggatgagaaatgggagatgggggaggaggactttgatagtgataag 428  Q
    ||||| ||||||||||| || || |||||||| || ||| |||| ||||| || | ||| | ||||||||||||  |||||||   ||  ||||  || |    
T  11902918 tatggtggtggaggagacggtgaaggtggtgggggagatgtgtaatagtaaggtgtatggggaatgggagatggatgaggaggggatttgtagtagtatg 11902819  T
Q  429 gaggtggtggagatggagatggaggtgggggagatttgtaatagtaagg 477  Q
    | ||||| |||||||| || || ||||||||||||||||||||||||||    
T  11902818 gtggtggaggagatggtgaaggtggtgggggagatttgtaatagtaagg 11902770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 382
Target Start/End: Complemental strand, 11905339 - 11905279
Alignment:
Q  322 gtaatggtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagtaggga 382  Q
    ||||| ||| |||||||| || |||||||||||||||||||| |||||||| |||||||||    
T  11905339 gtaatagtagggaggtggtggtgatggcgatggtggtggaggtgatttgtaatagtaggga 11905279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 11888243 - 11888193
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagta 378  Q
    |||||| ||||||||||| ||||||||||| || |||||||||||||||||    
T  11888243 gtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagta 11888193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 11888291 - 11888241
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagta 378  Q
    |||||| ||||||||||| ||||||||||| || |||||||||||||||||    
T  11888291 gtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagta 11888241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 11888339 - 11888289
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagta 378  Q
    |||||| ||||||||||| ||||||||||| || |||||||||||||||||    
T  11888339 gtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagta 11888289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 11888387 - 11888337
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagta 378  Q
    |||||| ||||||||||| ||||||||||| || |||||||||||||||||    
T  11888387 gtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagta 11888337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 11888435 - 11888385
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagta 378  Q
    |||||| ||||||||||| ||||||||||| || |||||||||||||||||    
T  11888435 gtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagta 11888385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 11888483 - 11888433
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagta 378  Q
    |||||| ||||||||||| ||||||||||| || |||||||||||||||||    
T  11888483 gtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagta 11888433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 11888531 - 11888481
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagta 378  Q
    |||||| ||||||||||| ||||||||||| || |||||||||||||||||    
T  11888531 gtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagta 11888481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 11888579 - 11888529
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagta 378  Q
    |||||| ||||||||||| ||||||||||| || |||||||||||||||||    
T  11888579 gtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagta 11888529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 11888627 - 11888577
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagta 378  Q
    |||||| ||||||||||| ||||||||||| || |||||||||||||||||    
T  11888627 gtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagta 11888577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 11888675 - 11888625
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagta 378  Q
    |||||| ||||||||||| ||||||||||| || |||||||||||||||||    
T  11888675 gtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagta 11888625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 11888723 - 11888673
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagta 378  Q
    |||||| ||||||||||| ||||||||||| || |||||||||||||||||    
T  11888723 gtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagta 11888673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 11888771 - 11888721
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagta 378  Q
    |||||| ||||||||||| ||||||||||| || |||||||||||||||||    
T  11888771 gtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagta 11888721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 11888819 - 11888769
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagta 378  Q
    |||||| ||||||||||| ||||||||||| || |||||||||||||||||    
T  11888819 gtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagta 11888769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 11888867 - 11888817
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagta 378  Q
    |||||| ||||||||||| ||||||||||| || |||||||||||||||||    
T  11888867 gtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagta 11888817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 11888915 - 11888865
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagta 378  Q
    |||||| ||||||||||| ||||||||||| || |||||||||||||||||    
T  11888915 gtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagta 11888865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 11888963 - 11888913
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagta 378  Q
    |||||| ||||||||||| ||||||||||| || |||||||||||||||||    
T  11888963 gtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagta 11888913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 11889011 - 11888961
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagta 378  Q
    |||||| ||||||||||| ||||||||||| || |||||||||||||||||    
T  11889011 gtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagta 11888961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 11889059 - 11889009
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagta 378  Q
    |||||| ||||||||||| ||||||||||| || |||||||||||||||||    
T  11889059 gtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagta 11889009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 11889107 - 11889057
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagta 378  Q
    |||||| ||||||||||| ||||||||||| || |||||||||||||||||    
T  11889107 gtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagta 11889057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 11889155 - 11889105
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagta 378  Q
    |||||| ||||||||||| ||||||||||| || |||||||||||||||||    
T  11889155 gtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagta 11889105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 11889203 - 11889153
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagta 378  Q
    |||||| ||||||||||| ||||||||||| || |||||||||||||||||    
T  11889203 gtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagta 11889153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 11889251 - 11889201
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagta 378  Q
    |||||| ||||||||||| ||||||||||| || |||||||||||||||||    
T  11889251 gtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagta 11889201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 11889299 - 11889249
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagta 378  Q
    |||||| ||||||||||| ||||||||||| || |||||||||||||||||    
T  11889299 gtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagta 11889249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 11889347 - 11889297
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagta 378  Q
    |||||| ||||||||||| ||||||||||| || |||||||||||||||||    
T  11889347 gtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagta 11889297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 11889395 - 11889345
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagta 378  Q
    |||||| ||||||||||| ||||||||||| || |||||||||||||||||    
T  11889395 gtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagta 11889345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 11889443 - 11889393
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagta 378  Q
    |||||| ||||||||||| ||||||||||| || |||||||||||||||||    
T  11889443 gtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagta 11889393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 11889491 - 11889441
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagta 378  Q
    |||||| ||||||||||| ||||||||||| || |||||||||||||||||    
T  11889491 gtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagta 11889441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 11889539 - 11889489
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagta 378  Q
    |||||| ||||||||||| ||||||||||| || |||||||||||||||||    
T  11889539 gtatggtggtggaggagaaggcgatggtggaggtggggatttgtagtagta 11889489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 315
Target Start/End: Original strand, 52818287 - 52818357
Alignment:
Q  245 ttgtagattggtggtggtggagaagcatagatgtaagctggtggtggaggtgactttactggtgggggagg 315  Q
    |||||||| ||||||||||| |||||||| |||||| |||| || |||||||| || | ||||||||||||    
T  52818287 ttgtagataggtggtggtggggaagcataaatgtaaactggcggaggaggtgatttcattggtgggggagg 52818357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 491
Target Start/End: Original strand, 52819097 - 52819154
Alignment:
Q  434 ggtggagatggagatggaggtgggggagatttgtaatagtaaggaggtggcggtgatg 491  Q
    ||||| ||||| ||||| ||||||||||||||||||||||| ||||| || |||||||    
T  52819097 ggtggggatggtgatggcggtgggggagatttgtaatagtatggagggggaggtgatg 52819154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 428 - 480
Target Start/End: Complemental strand, 11882388 - 11882336
Alignment:
Q  428 ggaggtggtggagatggagatggaggtgggggagatttgtaatagtaaggagg 480  Q
    ||||||||||| ||||| ||||| ||||| ||||||||||||||||| |||||    
T  11882388 ggaggtggtggtgatggtgatggtggtggaggagatttgtaatagtatggagg 11882336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 428 - 480
Target Start/End: Complemental strand, 11891622 - 11891570
Alignment:
Q  428 ggaggtggtggagatggagatggaggtgggggagatttgtaatagtaaggagg 480  Q
    ||||||||||| ||||| ||||| ||||| ||||||||||||||||| |||||    
T  11891622 ggaggtggtggtgatggtgatggtggtggaggagatttgtaatagtatggagg 11891570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 384
Target Start/End: Original strand, 52818799 - 52818855
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagtagggagg 384  Q
    ||||||||||||||| ||||| | |||||||||||| ||||||||||| || |||||    
T  52818799 gtatggaggtggaggtgatggggttggtggtggaggtgatttgtagtaataaggagg 52818855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 474
Target Start/End: Original strand, 52818842 - 52818897
Alignment:
Q  419 tagtgataaggaggtggtggagatggagatggaggtgggggagatttgtaatagta 474  Q
    |||| ||||||||||||||||||||| ||||| ||||| || |||| |||||||||    
T  52818842 tagtaataaggaggtggtggagatggtgatggtggtggaggggattggtaatagta 52818897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 322 - 384
Target Start/End: Complemental strand, 11882398 - 11882336
Alignment:
Q  322 gtaatggtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagtagggagg 384  Q
    ||||| ||| |||||||| || ||||| |||||||||||||| |||||||| ||||| |||||    
T  11882398 gtaatagtagggaggtggtggtgatggtgatggtggtggaggagatttgtaatagtatggagg 11882336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 322 - 384
Target Start/End: Complemental strand, 11882494 - 11882432
Alignment:
Q  322 gtaatggtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagtagggagg 384  Q
    ||||| ||| |||||||| || ||||| |||||||||||||| |||||||| ||||| |||||    
T  11882494 gtaatagtaaggaggtggtggtgatggtgatggtggtggaggagatttgtaatagtatggagg 11882432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 322 - 384
Target Start/End: Complemental strand, 11891632 - 11891570
Alignment:
Q  322 gtaatggtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagtagggagg 384  Q
    ||||| ||| |||||||| || ||||| |||||||||||||| |||||||| ||||| |||||    
T  11891632 gtaatagtagggaggtggtggtgatggtgatggtggtggaggagatttgtaatagtatggagg 11891570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 322 - 384
Target Start/End: Complemental strand, 11891728 - 11891666
Alignment:
Q  322 gtaatggtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagtagggagg 384  Q
    ||||| ||| |||||||| || ||||| |||||||||||||| |||||||| ||||| |||||    
T  11891728 gtaatagtaaggaggtggtggtgatggtgatggtggtggaggagatttgtaatagtatggagg 11891666  T

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Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 322 - 384
Target Start/End: Complemental strand, 11905531 - 11905469
Alignment:
Q  322 gtaatggtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagtagggagg 384  Q
    ||||| ||| |||||||| || ||||| || ||||||||||| |||||||| |||||||||||    
T  11905531 gtaatagtaaggaggtggcggtgatggtgacggtggtggaggtgatttgtaatagtagggagg 11905469  T

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Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 378
Target Start/End: Original strand, 52818851 - 52818897
Alignment:
Q  332 ggaggtggaggagatggcgatggtggtggaggggatttgtagtagta 378  Q
    |||||||| |||||||| ||||||||||||||||||| ||| |||||    
T  52818851 ggaggtggtggagatggtgatggtggtggaggggattggtaatagta 52818897  T

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Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 381
Target Start/End: Complemental strand, 11889683 - 11889630
Alignment:
Q  328 gtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagtaggg 381  Q
    |||||| |||||||||||||| || |||||||| || ||||| |||||||||||    
T  11889683 gtatggtggtggaggagatggtgaaggtggtgggggtgatttatagtagtaggg 11889630  T

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Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 378
Target Start/End: Complemental strand, 11889577 - 11889537
Alignment:
Q  338 ggaggagatggcgatggtggtggaggggatttgtagtagta 378  Q
    |||||||| ||||||||||| || |||||||||||||||||    
T  11889577 ggaggagaaggcgatggtggaggtggggatttgtagtagta 11889537  T

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Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 322 - 378
Target Start/End: Complemental strand, 11889833 - 11889777
Alignment:
Q  322 gtaatggtatggaggtggaggagatggcgatggtggtggaggggatttgtagtagta 378  Q
    ||||| |||||| |||||||||||||| || |||||||| ||||| ||||| |||||    
T  11889833 gtaatagtatggtggtggaggagatggtgaaggtggtggtggggacttgtaatagta 11889777  T

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Target: chr4 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 468
Target Start/End: Original strand, 24482211 - 24482255
Alignment:
Q  424 ataaggaggtggtggagatggagatggaggtgggggagatttgta 468  Q
    ||||||||||||||| ||||||||||| ||||| |||||||||||    
T  24482211 ataaggaggtggtggtgatggagatggtggtggtggagatttgta 24482255  T

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Target: scaffold1918 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1918
Description:

Target: scaffold1918; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 428 - 483
Target Start/End: Original strand, 19 - 74
Alignment:
Q  428 ggaggtggtggagatggagatggaggtgggggagatttgtaatagtaaggaggtgg 483  Q
    |||||||| || || |||||||| ||||| |||||||||||||||||||| |||||    
T  19 ggaggtggaggtgagggagatggtggtggtggagatttgtaatagtaaggtggtgg 74  T

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