View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7221_low_17 (Length: 273)
Name: NF7221_low_17
Description: NF7221
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7221_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 18 - 262
Target Start/End: Original strand, 21930940 - 21931178
Alignment:
| Q |
18 |
attatatagtttgtcttcataaattttatatggttgtgtgtgccaaagttttatgttcattgatgtgtaagtgtatagtattgcactaaattgtgtttca |
117 |
Q |
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| T |
21930940 |
attatatagtttgtcttcataaattttatatggttgtgtgtgccaaagttttatgttcattgatgtgt------atagtattgtactaaattgtgtttca |
21931033 |
T |
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| Q |
118 |
attaaagaatgatagtatgcaggcacattccttgtcacattgaattcacatgtctcctaattatccacctcttcactctctcaaacaaaatattcatata |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21931034 |
attaaagaatgatagtatgcaggcacattccttgtcacattgaattcacatgtctcctaattatccacctcttcactctctcaaacaaaatattcatata |
21931133 |
T |
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| Q |
218 |
gaagttcaagatattcttctttttatttatttataaattattcat |
262 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21931134 |
gaagttcaagatattcttctttttatttatttataaattattcat |
21931178 |
T |
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