View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7223_high_12 (Length: 265)
Name: NF7223_high_12
Description: NF7223
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7223_high_12 |
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Alignment Details
Target: chr1 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 10 - 255
Target Start/End: Complemental strand, 40568342 - 40568097
Alignment:
| Q |
10 |
acctgtgtattgtgagtaactgtggtcggtgaccagcttcaatcatttgccgagctaaatcatgtagaagtggcaaaattcttggtggtataagagcggg |
109 |
Q |
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| T |
40568342 |
acctgtatattgtgagtaactgtggtcggtgaccagcttcaatcatttgccgagctaaatcatgtagaagtggcaaaattcttggtggtataagagtggg |
40568243 |
T |
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| Q |
110 |
aggtgtgtatacaacagcatcagcgttattgttgtcagaatggtggttggacttgccactatgttcaccctcattaccaggtgatcctgaagaaggtcgc |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40568242 |
aggtgtgtatacaacagcatcagcgttattgttgtcagaatggtggttggacttgccactatgttcaccctcattaccaggtgatcctgaagaaggtcgc |
40568143 |
T |
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| Q |
210 |
atcgagtttggaaggcaatcaaagaggcgctcgggttccacaggtt |
255 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40568142 |
atcgagtttggaaggcaatcaaagaggcgctcgggttccacaggtt |
40568097 |
T |
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