View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7223_low_12 (Length: 321)

Name: NF7223_low_12
Description: NF7223
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7223_low_12
NF7223_low_12
[»] chr4 (49 HSPs)
chr4 (11-308)||(52568151-52568448)
chr4 (30-174)||(26329921-26330066)
chr4 (14-141)||(31229293-31229421)
chr4 (23-174)||(52181720-52181872)
chr4 (22-197)||(8408826-8409003)
chr4 (53-180)||(26330005-26330132)
chr4 (14-174)||(5387131-5387292)
chr4 (57-180)||(43098414-43098537)
chr4 (15-175)||(52183392-52183544)
chr4 (54-180)||(22025301-22025426)
chr4 (56-172)||(9320017-9320133)
chr4 (27-137)||(22025095-22025206)
chr4 (68-175)||(41735816-41735923)
chr4 (68-175)||(43098365-43098472)
chr4 (19-169)||(19681203-19681350)
chr4 (68-171)||(2788928-2789031)
chr4 (53-140)||(2788973-2789060)
chr4 (62-170)||(35046437-35046545)
chr4 (14-116)||(52567746-52567849)
chr4 (59-137)||(26329805-26329883)
chr4 (30-180)||(43098181-43098328)
chr4 (87-175)||(19631767-19631855)
chr4 (58-140)||(35046550-35046632)
chr4 (87-180)||(2788789-2788882)
chr4 (25-128)||(8408393-8408497)
chr4 (104-175)||(26329936-26330007)
chr4 (53-180)||(41735752-41735878)
chr4 (68-172)||(2909182-2909286)
chr4 (84-172)||(22025271-22025358)
chr4 (22-116)||(19632212-19632306)
chr4 (57-138)||(36890450-36890533)
chr4 (38-116)||(42116050-42116129)
chr4 (68-148)||(36890502-36890583)
chr4 (27-111)||(36890618-36890703)
chr4 (67-180)||(52865955-52866068)
chr4 (68-111)||(52866367-52866410)
chr4 (14-52)||(30543095-30543133)
chr4 (58-111)||(2508270-2508323)
chr4 (19-111)||(5387584-5387677)
chr4 (107-175)||(52181779-52181847)
chr4 (31-125)||(35023955-35024050)
chr4 (104-175)||(52567747-52567818)
chr4 (104-174)||(8408407-8408477)
chr4 (19-80)||(44915937-44915999)
chr4 (107-172)||(9320077-9320142)
chr4 (22-66)||(19631871-19631916)
chr4 (104-180)||(19632235-19632310)
chr4 (104-180)||(35023745-35023821)
chr4 (123-171)||(35046555-35046603)
[»] chr8 (65 HSPs)
chr8 (22-171)||(9276960-9277109)
chr8 (29-180)||(9770768-9770920)
chr8 (19-174)||(30576632-30576788)
chr8 (27-175)||(36359904-36360053)
chr8 (27-180)||(45017745-45017899)
chr8 (14-174)||(23553359-23553520)
chr8 (23-197)||(9276462-9276639)
chr8 (19-175)||(39701365-39701522)
chr8 (8-180)||(44041249-44041422)
chr8 (14-175)||(39700888-39701050)
chr8 (19-174)||(25730095-25730252)
chr8 (14-180)||(16197027-16197194)
chr8 (27-180)||(29794238-29794392)
chr8 (22-180)||(8713844-8714003)
chr8 (14-175)||(25737107-25737269)
chr8 (19-172)||(25737581-25737736)
chr8 (30-180)||(30576150-30576301)
chr8 (67-175)||(40553260-40553368)
chr8 (67-174)||(11113555-11113662)
chr8 (53-172)||(43422864-43422983)
chr8 (53-180)||(43423100-43423226)
chr8 (14-171)||(31169452-31169609)
chr8 (59-181)||(36360088-36360210)
chr8 (67-174)||(9770565-9770672)
chr8 (23-116)||(13771843-13771937)
chr8 (19-172)||(23553840-23553994)
chr8 (23-174)||(8714330-8714482)
chr8 (60-180)||(40553313-40553433)
chr8 (68-172)||(41190293-41190397)
chr8 (19-140)||(4613778-4613900)
chr8 (67-180)||(14871368-14871482)
chr8 (19-140)||(40552800-40552922)
chr8 (19-111)||(13771425-13771518)
chr8 (87-180)||(29792559-29792652)
chr8 (8-111)||(5358650-5358754)
chr8 (67-175)||(6236250-6236358)
chr8 (60-147)||(39700856-39700943)
chr8 (68-175)||(43422921-43423028)
chr8 (59-180)||(45017934-45018053)
chr8 (96-180)||(36314697-36314781)
chr8 (22-116)||(35433899-35433994)
chr8 (30-116)||(35434313-35434400)
chr8 (49-116)||(36360138-36360205)
chr8 (59-128)||(9770662-9770731)
chr8 (31-171)||(16208674-16208815)
chr8 (24-116)||(34686875-34686968)
chr8 (87-140)||(43423074-43423127)
chr8 (14-114)||(6235793-6235895)
chr8 (60-114)||(9277058-9277112)
chr8 (107-180)||(13771868-13771941)
chr8 (104-180)||(35434328-35434404)
chr8 (69-116)||(23179049-23179096)
chr8 (104-175)||(23553418-23553489)
chr8 (104-175)||(30576658-30576729)
chr8 (49-116)||(36359903-36359970)
chr8 (19-80)||(44040860-44040922)
chr8 (103-180)||(29030175-29030252)
chr8 (104-193)||(44040808-44040896)
chr8 (56-116)||(25737106-25737166)
chr8 (56-116)||(31169555-31169614)
chr8 (60-116)||(39701467-39701523)
chr8 (48-116)||(43423154-43423222)
chr8 (54-116)||(14871416-14871478)
chr8 (60-104)||(9770575-9770619)
chr8 (104-176)||(39701391-39701463)
[»] chr2 (35 HSPs)
chr2 (14-180)||(36196462-36196627)
chr2 (14-180)||(27893519-27893686)
chr2 (22-194)||(31264125-31264301)
chr2 (24-140)||(19080667-19080784)
chr2 (29-174)||(34336039-34336185)
chr2 (56-189)||(30907063-30907196)
chr2 (54-180)||(31263923-31264049)
chr2 (59-175)||(30907137-30907253)
chr2 (27-180)||(30907288-30907440)
chr2 (68-170)||(37542956-37543057)
chr2 (49-139)||(39376401-39376491)
chr2 (19-139)||(11871714-11871835)
chr2 (67-175)||(27893038-27893146)
chr2 (56-171)||(8260392-8260507)
chr2 (14-111)||(20535509-20535608)
chr2 (57-199)||(34336276-34336419)
chr2 (55-180)||(16781049-16781175)
chr2 (20-124)||(15506040-15506145)
chr2 (68-175)||(31263988-31264095)
chr2 (68-175)||(34429684-34429791)
chr2 (67-174)||(41265257-41265364)
chr2 (21-116)||(42117172-42117268)
chr2 (102-171)||(19081055-19081124)
chr2 (67-140)||(20535966-20536039)
chr2 (75-172)||(37543100-37543197)
chr2 (68-176)||(34336227-34336335)
chr2 (53-111)||(30907081-30907139)
chr2 (87-128)||(37543048-37543089)
chr2 (53-116)||(31263927-31263990)
chr2 (49-111)||(19081062-19081124)
chr2 (67-128)||(5116895-5116956)
chr2 (14-66)||(27893138-27893191)
chr2 (67-180)||(39376172-39376284)
chr2 (68-128)||(5116946-5117006)
chr2 (45-116)||(34429683-34429755)
[»] chr6 (37 HSPs)
chr6 (14-175)||(10862545-10862708)
chr6 (27-171)||(32417684-32417829)
chr6 (27-171)||(32423525-32423670)
chr6 (14-180)||(11527535-11527693)
chr6 (49-171)||(16168685-16168807)
chr6 (19-140)||(17180102-17180224)
chr6 (33-175)||(20575416-20575559)
chr6 (67-180)||(16168464-16168577)
chr6 (57-180)||(32417468-32417591)
chr6 (57-180)||(32423309-32423432)
chr6 (14-174)||(24139466-24139626)
chr6 (67-193)||(9902277-9902404)
chr6 (68-175)||(16168644-16168751)
chr6 (22-171)||(10962746-10962896)
chr6 (58-128)||(20575600-20575670)
chr6 (67-180)||(2839624-2839737)
chr6 (67-175)||(2840064-2840172)
chr6 (14-141)||(17179662-17179790)
chr6 (14-168)||(9946672-9946818)
chr6 (14-180)||(28630584-28630742)
chr6 (19-116)||(9901962-9902060)
chr6 (67-172)||(20575660-20575763)
chr6 (24-140)||(11528013-11528130)
chr6 (68-171)||(32417537-32417640)
chr6 (68-171)||(32423378-32423481)
chr6 (19-111)||(10407317-10407410)
chr6 (104-172)||(11528034-11528102)
chr6 (104-199)||(9901939-9902034)
chr6 (23-111)||(10407709-10407799)
chr6 (104-181)||(10407307-10407384)
chr6 (45-116)||(2839628-2839700)
chr6 (56-116)||(2840113-2840173)
chr6 (19-105)||(17132178-17132265)
chr6 (104-175)||(17180128-17180199)
chr6 (53-116)||(20575415-20575478)
chr6 (120-175)||(20575602-20575657)
chr6 (72-116)||(10862665-10862709)
[»] chr1 (34 HSPs)
chr1 (22-180)||(48352708-48352867)
chr1 (14-171)||(27351059-27351217)
chr1 (57-194)||(29419051-29419189)
chr1 (22-180)||(10686680-10686839)
chr1 (14-137)||(8902803-8902927)
chr1 (14-174)||(34254504-34254665)
chr1 (53-174)||(44964072-44964192)
chr1 (27-180)||(1765693-1765846)
chr1 (20-175)||(10685852-10685999)
chr1 (74-180)||(11897841-11897947)
chr1 (57-198)||(17898850-17898992)
chr1 (27-140)||(44963878-44963992)
chr1 (67-174)||(49650578-49650686)
chr1 (57-171)||(1765930-1766044)
chr1 (61-175)||(17898794-17898908)
chr1 (67-137)||(49651013-49651083)
chr1 (22-141)||(4772612-4772723)
chr1 (67-180)||(27351547-27351660)
chr1 (59-171)||(44964018-44964130)
chr1 (68-171)||(1765881-1765984)
chr1 (53-116)||(11897845-11897908)
chr1 (24-111)||(39302339-39302427)
chr1 (14-104)||(48352272-48352366)
chr1 (93-140)||(4030342-4030390)
chr1 (104-176)||(27351114-27351186)
chr1 (14-116)||(8903237-8903340)
chr1 (54-127)||(34254998-34255070)
chr1 (28-111)||(2965499-2965583)
chr1 (104-180)||(8903268-8903344)
chr1 (49-116)||(10685851-10685918)
chr1 (67-119)||(4772171-4772223)
chr1 (104-176)||(8902824-8902896)
chr1 (60-116)||(27351054-27351110)
chr1 (60-116)||(39302753-39302809)
[»] chr7 (80 HSPs)
chr7 (14-174)||(35214811-35214973)
chr7 (14-192)||(1441400-1441571)
chr7 (29-172)||(19925311-19925455)
chr7 (19-175)||(5559111-5559270)
chr7 (67-172)||(31893257-31893362)
chr7 (32-175)||(5805042-5805186)
chr7 (53-180)||(33879514-33879641)
chr7 (57-174)||(21433149-21433266)
chr7 (14-180)||(1286369-1286534)
chr7 (29-175)||(23150643-23150790)
chr7 (14-175)||(27995065-27995227)
chr7 (21-174)||(28256498-28256652)
chr7 (14-171)||(33235042-33235200)
chr7 (14-175)||(39959152-39959314)
chr7 (21-172)||(1349114-1349269)
chr7 (67-180)||(5559630-5559742)
chr7 (21-180)||(20366048-20366206)
chr7 (30-140)||(34951266-34951377)
chr7 (19-128)||(10619851-10619961)
chr7 (68-174)||(22876867-22876972)
chr7 (23-140)||(31175924-31176042)
chr7 (56-193)||(40904677-40904814)
chr7 (32-174)||(1346485-1346624)
chr7 (67-193)||(31893488-31893615)
chr7 (19-180)||(8039662-8039807)
chr7 (27-180)||(21413081-21413234)
chr7 (22-174)||(35215290-35215443)
chr7 (56-180)||(21412865-21412989)
chr7 (22-128)||(23679497-23679603)
chr7 (57-175)||(36566282-36566400)
chr7 (27-171)||(20101831-20101974)
chr7 (67-180)||(28256949-28257062)
chr7 (57-128)||(21433337-21433408)
chr7 (22-140)||(33235518-33235637)
chr7 (90-180)||(39958686-39958776)
chr7 (58-174)||(21412931-21413047)
chr7 (68-180)||(34951475-34951587)
chr7 (53-140)||(5805592-5805679)
chr7 (14-171)||(20183778-20183935)
chr7 (68-174)||(41020137-41020242)
chr7 (59-140)||(4187545-4187626)
chr7 (59-171)||(21433278-21433391)
chr7 (22-140)||(42990539-42990658)
chr7 (14-175)||(8040114-8040266)
chr7 (67-132)||(10620238-10620303)
chr7 (55-180)||(19925104-19925228)
chr7 (39-175)||(20366521-20366658)
chr7 (59-140)||(36566377-36566458)
chr7 (29-128)||(4187663-4187763)
chr7 (31-129)||(6220351-6220449)
chr7 (68-175)||(33879470-33879576)
chr7 (19-85)||(1286768-1286834)
chr7 (120-174)||(1441011-1441065)
chr7 (23-116)||(28104300-28104394)
chr7 (14-90)||(27995538-27995615)
chr7 (59-111)||(1441014-1441066)
chr7 (82-201)||(5075325-5075444)
chr7 (53-116)||(5805041-5805104)
chr7 (57-169)||(29591057-29591171)
chr7 (104-175)||(35214871-35214942)
chr7 (104-174)||(19925327-19925397)
chr7 (68-174)||(34951415-34951521)
chr7 (93-175)||(40904755-40904837)
chr7 (56-116)||(5559110-5559171)
chr7 (104-197)||(28104279-28104372)
chr7 (68-128)||(31893438-31893498)
chr7 (73-141)||(33879349-33879417)
chr7 (104-175)||(5805583-5805654)
chr7 (101-176)||(21433207-21433282)
chr7 (104-175)||(31175946-31176017)
chr7 (53-116)||(31893534-31893597)
chr7 (104-175)||(34951291-34951362)
chr7 (53-116)||(36566281-36566344)
chr7 (67-110)||(36566525-36566568)
chr7 (53-111)||(31893258-31893316)
chr7 (53-114)||(33235039-33235100)
chr7 (120-172)||(4187573-4187625)
chr7 (104-172)||(10619867-10619935)
chr7 (68-116)||(27995064-27995112)
chr7 (60-116)||(34951527-34951583)
[»] chr5 (42 HSPs)
chr5 (21-171)||(36418365-36418516)
chr5 (22-180)||(20728527-20728686)
chr5 (26-180)||(13543083-13543241)
chr5 (22-174)||(30738223-30738377)
chr5 (14-141)||(18248996-18249124)
chr5 (14-140)||(5734502-5734628)
chr5 (27-193)||(6336298-6336458)
chr5 (19-175)||(5734944-5735100)
chr5 (59-172)||(32660266-32660379)
chr5 (20-140)||(30737779-30737900)
chr5 (59-175)||(6336147-6336263)
chr5 (22-116)||(32459430-32459525)
chr5 (68-194)||(35189898-35190024)
chr5 (53-175)||(18951307-18951429)
chr5 (67-172)||(26275511-26275616)
chr5 (53-140)||(32660238-32660325)
chr5 (19-180)||(13538468-13538625)
chr5 (67-174)||(36417891-36417998)
chr5 (23-180)||(13543569-13543727)
chr5 (22-111)||(20729010-20729100)
chr5 (93-174)||(38405573-38405654)
chr5 (24-107)||(18238306-18238390)
chr5 (14-111)||(35891219-35891317)
chr5 (67-116)||(31813954-31814003)
chr5 (32-175)||(1722504-1722648)
chr5 (56-116)||(18951306-18951366)
chr5 (69-140)||(35190426-35190497)
chr5 (57-180)||(14235567-14235688)
chr5 (104-180)||(32459426-32459502)
chr5 (53-116)||(6336146-6336209)
chr5 (104-175)||(36418389-36418460)
chr5 (93-174)||(18951368-18951449)
chr5 (22-174)||(19278710-19278862)
chr5 (23-111)||(32459822-32459911)
chr5 (14-124)||(1722933-1723044)
chr5 (56-111)||(26275512-26275567)
chr5 (19-111)||(26275971-26276055)
chr5 (104-171)||(30737808-30737875)
chr5 (53-116)||(36418458-36418521)
chr5 (60-111)||(38405600-38405651)
chr5 (22-111)||(18237920-18238010)
chr5 (57-111)||(31813894-31813948)
[»] chr3 (20 HSPs)
chr3 (14-196)||(31247602-31247786)
chr3 (14-140)||(4276174-4276301)
chr3 (92-175)||(21377036-21377119)
chr3 (19-141)||(35555565-35555688)
chr3 (93-194)||(50530230-50530332)
chr3 (67-128)||(4276628-4276689)
chr3 (20-180)||(3088066-3088218)
chr3 (14-180)||(21376565-21376732)
chr3 (72-174)||(14964648-14964749)
chr3 (24-111)||(19153885-19153974)
chr3 (27-111)||(54456679-54456764)
chr3 (59-172)||(54456799-54456912)
chr3 (104-198)||(54456651-54456746)
chr3 (14-111)||(31247195-31247292)
chr3 (14-116)||(14629288-14629382)
chr3 (23-104)||(21410273-21410355)
chr3 (29-111)||(24707475-24707558)
chr3 (56-136)||(5505741-5505822)
chr3 (68-174)||(5505692-5505800)
chr3 (45-140)||(54456844-54456940)
[»] scaffold0070 (2 HSPs)
scaffold0070 (19-175)||(28548-28705)
scaffold0070 (45-116)||(28547-28619)
[»] scaffold0019 (4 HSPs)
scaffold0019 (49-180)||(124351-124482)
scaffold0019 (87-175)||(124329-124417)
scaffold0019 (59-180)||(124142-124262)
scaffold0019 (54-116)||(124146-124208)
[»] scaffold0746 (3 HSPs)
scaffold0746 (19-140)||(498-620)
scaffold0746 (14-175)||(25-186)
scaffold0746 (104-175)||(524-595)
[»] scaffold0041 (2 HSPs)
scaffold0041 (56-193)||(45204-45341)
scaffold0041 (93-175)||(45181-45263)
[»] scaffold0027 (2 HSPs)
scaffold0027 (19-195)||(9377-9546)
scaffold0027 (73-175)||(9891-9993)
[»] scaffold0374 (3 HSPs)
scaffold0374 (19-116)||(16176-16274)
scaffold0374 (14-111)||(16565-16663)
scaffold0374 (104-180)||(16172-16248)


Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 11 - 308
Target Start/End: Original strand, 52568151 - 52568448
Alignment:
Q  11 atggacatcaggggtaacggtgaaatagtttatcaattaaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaa 110  Q
    |||||||||||||||||||||||||||||||||||| |||| || ||||||||||| ||||||||||||| |||||||||| ||||||| ||||||||||    
T  52568151 atggacatcaggggtaacggtgaaatagtttatcaactaaaggatctatttgaaacttttgaaacttaaaggactgacttgagaattctatcaaactaaa 52568250  T
Q  111 atgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaatgatttttgacctaaaatataatagtaatt 210  Q
    ||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  52568251 atgacctaattgaaacttttgaaatttaaagtactaaattgggagttatgtcaaactaaaatgactaaaatgatttttgacctaaaatataatagtaact 52568350  T
Q  211 tcgtcaagtagtctagtgactggaacccacatttttatgtatgaataaatgagagtttgagtttgaatctttatccgtgtatatattatgtgatgtcc 308  Q
    || ||||||||||||||| || || |||| |||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||| ||||||    
T  52568351 tcatcaagtagtctagtggctagagcccatatttttatgtatgaataaatgagagtgtgagtttgaatctttacccatgtatatattatgtaatgtcc 52568448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 30 - 174
Target Start/End: Original strand, 26329921 - 26330066
Alignment:
Q  30 gtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactt 128  Q
    ||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||| |||||| |||||||||    
T  26329921 gtgaaatagtttatcaactaaaatgacctatttgaaacttttgaaacttaaatgactaacttgggaattatgtcaaactaaaaggacctatttgaaactt 26330020  T
Q  129 tcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 174  Q
    | ||||||||||  ||||| |||||| || ||| ||||||||||||    
T  26330021 ttgaaacttaaaggactaacttgggaattctgtaaaactaaaagga 26330066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 31229421 - 31229293
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaaga-cctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| ||| |||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||| ||||| ||||||| |||||||||||     
T  31229421 gacagcagaggtaacggtgaaatagtttatcaactaaaagaacctatttgaaacttttgaaacttaaatgactaacttgagaattctatcaaactaaaaa 31229322  T
Q  113 gacctaattgaaactttcgaaacttaaaa 141  Q
    ||||||| |||||||||||||||||||||    
T  31229321 gacctaagtgaaactttcgaaacttaaaa 31229293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 23 - 174
Target Start/End: Complemental strand, 52181872 - 52181720
Alignment:
Q  23 ggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaatt 121  Q
    |||||||||||||||||||||||||||||| ||| | |||||||| ||||||||||||| |||| ||||||||||||||||||||||||| ||| | |||    
T  52181872 ggtaacggtgaaatagtttatcaattaaaatgacatgtttgaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggacatgatt 52181773  T
Q  122 gaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 174  Q
    ||||||||| ||| |||||  ||||| ||| || || ||||||||||||||||    
T  52181772 gaaactttcaaaatttaaagaactaacttgagaattttgtcaaactaaaagga 52181720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 22 - 197
Target Start/End: Original strand, 8408826 - 8409003
Alignment:
Q  22 gggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaat 120  Q
    ||||| ||||||||||||||||||| ||| | |||||||||||||| |||||||||||||||||| |||||  ||||||||||||||||||  || | ||    
T  8408826 gggtagcggtgaaatagtttatcaactaagatgacctatttgaaacttttgaaacttaaatgactaacttgaaaattctgtcaaactaaaagaacatcat 8408925  T
Q  121 tgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa-tgatttttgacctaaaa 197  Q
    ||||| ||||||||||||||  ||||| ||| || |||||||||||||||| ||| |||| |||| ||||||| ||||    
T  8408926 tgaaattttcgaaacttaaatgactaacttgagaattatgtcaaactaaaatgaccaaaagtgatatttgaccaaaaa 8409003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 26330005 - 26330132
Alignment:
Q  53 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgg 152  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||||||| ||||||||| || ||||||||||||||| |||||||||  ||||| |||     
T  26330005 gacctatttgaaacttttgaaacttaaaggactaacttgggaattctgtaaaactaaaaggatctaattgaaactttcaaaacttaaaggactaacttga 26330104  T
Q  153 gagttatgtcaaactaaaaggactaaaa 180  Q
    || || ||||||||||||||||||||||    
T  26330105 gaattctgtcaaactaaaaggactaaaa 26330132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 14 - 174
Target Start/End: Complemental strand, 5387292 - 5387131
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| |||||||||||||||||| ||||||||| ||||| || ||||||||||| ||||||||||||| | || ||||||||||||||||||||||||||    
T  5387292 gacagcaggggtaacggtgaaattgtttatcaactaaaaagatctatttgaaacttttgaaacttaaagggctaacttgggaattctgtcaaactaaaat 5387193  T
Q  113 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 174  Q
    ||  |||||||||||||  |||||||||  ||||| || | | ||  |||||||||||||||    
T  5387192 gatataattgaaacttttaaaacttaaaggactaacttagaaattcagtcaaactaaaagga 5387131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 57 - 180
Target Start/End: Original strand, 43098414 - 43098537
Alignment:
Q  57 tatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagt 156  Q
    |||||||||| ||||||||||||| |||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||  ||||| || | | |    
T  43098414 tatttgaaacttttgaaacttaaaggactaacttgggaattttgtcaaactaaaaggacctaattgaaactttcgaaacttaaagaactaagttagaaat 43098513  T
Q  157 tatgtcaaactaaaaggactaaaa 180  Q
    | ||||||||||||||||| ||||    
T  43098514 tctgtcaaactaaaaggaccaaaa 43098537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 175
Target Start/End: Original strand, 52183392 - 52183544
Alignment:
Q  15 acatcaggggtaacggtgaaatagtttatcaa-ttaaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatg 113  Q
    |||||||||||||||||||||||||||||||| |||||| || |||||         |||||||||| ||||| |||||||||||||||||||||||| |    
T  52183392 acatcaggggtaacggtgaaatagtttatcaacttaaaaaacttattt---------gaaacttaaaggactggcttgggaattctgtcaaactaaaagg 52183482  T
Q  114 acctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
     ||||||||||||||||||||||||||  ||||| ||| || || ||| |||||||||||||    
T  52183483 gcctaattgaaactttcgaaacttaaaggactaacttgagaattttgtaaaactaaaaggac 52183544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 54 - 180
Target Start/End: Original strand, 22025301 - 22025426
Alignment:
Q  54 acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattggg 153  Q
    ||||||||||||| |||||| |||||| |||| |||||||||||||||||||||||||  |||||||||||||||||||||||| ||  ||||| |||      
T  22025301 acctatttgaaacctttgaa-cttaaaggactaacttgggaattctgtcaaactaaaagaacctaattgaaactttcgaaacttcaaggactaacttgat 22025399  T
Q  154 agttatgtcaaactaaaaggactaaaa 180  Q
    | |||||||||||||||| ||||||||    
T  22025400 aattatgtcaaactaaaatgactaaaa 22025426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 56 - 172
Target Start/End: Complemental strand, 9320133 - 9320017
Alignment:
Q  56 ctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggag 155  Q
    ||||||||||| ||||||| |||||||||| | ||| |||||||||||||||||||  || ||||||||||||||||||||||||| ||||| ||| ||     
T  9320133 ctatttgaaacttttgaaatttaaatgactaaattgagaattctgtcaaactaaaagaacttaattgaaactttcgaaacttaaaaaactaacttgagaa 9320034  T
Q  156 ttatgtcaaactaaaag 172  Q
    || ||||||||||||||    
T  9320033 ttttgtcaaactaaaag 9320017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 27 - 137
Target Start/End: Complemental strand, 22025206 - 22025095
Alignment:
Q  27 acggtgaaatagtttatcaattaaaaga-cctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaa 125  Q
    |||||||||||||||||||| ||||||| |||||||||||| ||| || |||||  |||| ||||  |||||||||||||||||||||||||||||||||    
T  22025206 acggtgaaatagtttatcaactaaaagaacctatttgaaactttttaatcttaacggactaacttaagaattctgtcaaactaaaatgacctaattgaaa 22025107  T
Q  126 ctttcgaaactt 137  Q
    |||||| |||||    
T  22025106 ctttcgtaactt 22025095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 41735923 - 41735816
Alignment:
Q  68 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 167  Q
    ||||||| ||||| ||||||||||| |||||||||||||||||| |||||| |||||||||| ||||||||||  ||||| |||||| |||||| |||||    
T  41735923 tttgaaatttaaaggactgacttggaaattctgtcaaactaaaaggacctatttgaaacttttgaaacttaaaggactaacttgggaattatgttaaact 41735824  T
Q  168 aaaaggac 175  Q
    ||||||||    
T  41735823 aaaaggac 41735816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 43098365 - 43098472
Alignment:
Q  68 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 167  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||| || |||||||||| ||||||||||  ||||| |||||| || |||||||||    
T  43098365 tttgaaacttaaaggactaacttgggaattctgttaaactaaaatgacatatttgaaacttttgaaacttaaaggactaacttgggaattttgtcaaact 43098464  T
Q  168 aaaaggac 175  Q
    ||||||||    
T  43098465 aaaaggac 43098472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 169
Target Start/End: Complemental strand, 19681350 - 19681203
Alignment:
Q  19 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 117  Q
    ||||||||| |||||||||||||||||| ||||| |||||||||||| | |||| | ||||||     ||||| ||||||||||||||||||||||| ||    
T  19681350 caggggtaatggtgaaatagtttatcaactaaaatgacctatttgaatcctttgcaccttaaa----ggacttcggaattctgtcaaactaaaatgatct 19681255  T
Q  118 aattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaa 169  Q
    |||||||| ||||||||||||||| ||||| ||| || ||  ||||||||||    
T  19681254 aattgaaaatttcgaaacttaaaaaactaacttgagaattcggtcaaactaa 19681203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 171
Target Start/End: Original strand, 2788928 - 2789031
Alignment:
Q  68 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 167  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||| ||||||||||  ||||| |||  | || |||||||||    
T  2788928 tttgaaacttaaatgactaacttgagaattctgtcaaactaaaatgacctatttgaaacttttgaaacttaaaggactaacttgaaaattctgtcaaact 2789027  T
Q  168 aaaa 171  Q
    ||||    
T  2789028 aaaa 2789031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 2788973 - 2789060
Alignment:
Q  53 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaa 140  Q
    |||||||||||||| ||||||||||||| |||| |||||  ||||||||||||||||||||||||||||||||||| | |||||||||    
T  2788973 gacctatttgaaacttttgaaacttaaaggactaacttgaaaattctgtcaaactaaaatgacctaattgaaacttccaaaacttaaa 2789060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 62 - 170
Target Start/End: Complemental strand, 35046545 - 35046437
Alignment:
Q  62 gaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgt 161  Q
    ||||| ||||||||||||| |||| | || |||||||||||||||||||| || |||||| ||||||||||||||||||  |||||||||  | ||||||    
T  35046545 gaaacttttgaaacttaaaggactaatttaggaattctgtcaaactaaaaggatctaattaaaactttcgaaacttaaaggactaaattgaaaattatgt 35046446  T
Q  162 caaactaaa 170  Q
    |||||||||    
T  35046445 caaactaaa 35046437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 52567849 - 52567746
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| |||| ||||| ||||||||||||||||| ||||| ||||||||| |||| |||||||||||||||||| ||||  |||||||||||||||||||     
T  52567849 gacagcaggagtaacagtgaaatagtttatcaactaaaatgacctatttaaaacttttgaaacttaaatgactaacttaagaattctgtcaaactaaaag 52567750  T
Q  113 gacc 116  Q
    ||||    
T  52567749 gacc 52567746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 137
Target Start/End: Complemental strand, 26329883 - 26329805
Alignment:
Q  59 tttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaactt 137  Q
    |||||||| ||||||||||||| | || |||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  26329883 tttgaaacttttgaaacttaaagggctaacttggaaattctgtcaaactaaaaggacctaattgaaactttcgaaactt 26329805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 180
Target Start/End: Complemental strand, 43098328 - 43098181
Alignment:
Q  30 gtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactt 128  Q
    ||||||||||||||||| |||||| || |||||||||| ||||||||||    |||| |||| |||| ||||  ||||||||| ||||||||||||||||    
T  43098328 gtgaaatagtttatcaactaaaaggacttatttgaaacttttgaaactt----gactaacttcggaactctggtaaactaaaaggacctaattgaaactt 43098233  T
Q  129 tcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    || |||||||||  ||||| || | | || ||||||||||||||||| ||||    
T  43098232 tcaaaacttaaaggactaacttagaaattttgtcaaactaaaaggaccaaaa 43098181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 19631855 - 19631767
Alignment:
Q  87 acttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||  ||||| ||| || || ||||||| |||||||||    
T  19631855 acttgagaattctgtcaaactaaaaggacctaattgaaactttcgaaacttaaaggactaacttgagaattttgtcaaaataaaaggac 19631767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 140
Target Start/End: Original strand, 35046550 - 35046632
Alignment:
Q  58 atttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaa 140  Q
    |||| |||| ||||||||||||| |||| ||||||||||| ||||||||||||||| || |||| ||||||||||||||||||    
T  35046550 atttaaaacttttgaaacttaaaggactaacttgggaattatgtcaaactaaaatggccaaattaaaactttcgaaacttaaa 35046632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 2788882 - 2788789
Alignment:
Q  87 acttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||  ||||| ||| || ||   |||||||||||||| |||||    
T  2788882 acttgagaattctgtcaaactaaaaggacctaattgaaactttcgaaacttaaaggactaacttgagaatttcatcaaactaaaaggattaaaa 2788789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 25 - 128
Target Start/End: Complemental strand, 8408497 - 8408393
Alignment:
Q  25 taacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattga 123  Q
    |||||||||||||| ||||||| ||||| ||| |||||||||| ||| ||||||||| |||| ||||| ||||| ||||||||||||| || ||| ||||    
T  8408497 taacggtgaaatagcttatcaactaaaatgacttatttgaaacttttcaaacttaaaagacttacttgagaattttgtcaaactaaaaggatctatttga 8408398  T
Q  124 aactt 128  Q
    |||||    
T  8408397 aactt 8408393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 26329936 - 26330007
Alignment:
Q  104 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    ||||||||||||||| |||||||||| ||||||||||  ||||| |||||| ||||||||||||||||||||    
T  26329936 aactaaaatgacctatttgaaacttttgaaacttaaatgactaacttgggaattatgtcaaactaaaaggac 26330007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 41735878 - 41735752
Alignment:
Q  53 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgg 152  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||| ||| ||||||||| |||| | ||||||||||| ||||| |||  ||||| |||     
T  41735878 gacctatttgaaacttttgaaacttaaaggactaacttgggaattatgttaaactaaaaggacc-agttgaaactttcaaaactaaaagaactaacttga 41735780  T
Q  153 gagttatgtcaaactaaaaggactaaaa 180  Q
    || |  ||| ||||||||||||| ||||    
T  41735779 gaatcttgttaaactaaaaggaccaaaa 41735752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 172
Target Start/End: Complemental strand, 2909286 - 2909182
Alignment:
Q  68 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 167  Q
    ||||||| ||||| |||| ||||| ||||||||| |||||||||  |||||||||| ||||||||||||||||  ||||| ||| || || ||| |||||    
T  2909286 tttgaaatttaaaggactaacttgagaattctgtaaaactaaaagaacctaattgacactttcgaaacttaaagaactaacttgagaattctgtgaaact 2909187  T
Q  168 aaaag 172  Q
    |||||    
T  2909186 aaaag 2909182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 172
Target Start/End: Original strand, 22025271 - 22025358
Alignment:
Q  84 ctgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaag 172  Q
    |||||||| |||||||||||||||||||| ||||| ||||||| || | ||||||||  ||||| |||||| || ||||||||||||||    
T  22025271 ctgacttgagaattctgtcaaactaaaattacctatttgaaacctttg-aacttaaaggactaacttgggaattctgtcaaactaaaag 22025358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 19632212 - 19632306
Alignment:
Q  22 gggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    ||||||| ||||| ||||||||||| ||||| ||| ||||| |||| ||||||||||||| |||| | ||| ||||||||||||||||||| ||||    
T  19632212 gggtaacagtgaagtagtttatcaactaaaatgacatatttaaaacttttgaaacttaaa-gactaatttgagaattctgtcaaactaaaaggacc 19632306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 138
Target Start/End: Complemental strand, 36890533 - 36890450
Alignment:
Q  57 tatttgaaacatttgaaacttaaatgactga-cttgggaattctgtcaaactaaaa-tgacctaattgaaactttcgaaactta 138  Q
    |||||||||| ||||||||||||| |||| | ||| ||||||||||||||| |||| ||| ||||||||||||||| |||||||    
T  36890533 tatttgaaacttttgaaacttaaaagactaaacttcggaattctgtcaaaccaaaaatgatctaattgaaactttcaaaactta 36890450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 116
Target Start/End: Original strand, 42116050 - 42116129
Alignment:
Q  38 gtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||| |||| ||||   |||| ||||||||||||||||||    
T  42116050 gtttatcaattaaaaagacctatttaaaacttttgaaacttaaaggactaacttaaaaattttgtcaaactaaaatgacc 42116129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 148
Target Start/End: Complemental strand, 36890583 - 36890502
Alignment:
Q  68 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaa-tgacctaattgaaactttcgaaacttaaaatactaaa 148  Q
    ||||||||||||| |||| |||||| |||| ||||||| ||||| |||| || |||||||||| ||||||||||| ||||||    
T  36890583 tttgaaacttaaaggactaacttggaaattatgtcaaattaaaaatgacttatttgaaacttttgaaacttaaaagactaaa 36890502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 36890618 - 36890703
Alignment:
Q  27 acggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 111  Q
    |||||||||||||||||||| ||||| ||||||||  |||| ||| |||||||||||| | ||||   ||||||||||||||||||    
T  36890618 acggtgaaatagtttatcaactaaaatgacctattataaacttttaaaacttaaatgattaacttaaaaattctgtcaaactaaaa 36890703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 180
Target Start/End: Complemental strand, 52866068 - 52865955
Alignment:
Q  67 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 166  Q
    |||||||||||||| ||||   ||| | ||| |||||||||||||  || ||||| |||||||| |||||||||  ||||| ||| || || ||||||||    
T  52866068 atttgaaacttaaaggactagattgagcattttgtcaaactaaaagaacataatttaaactttcaaaacttaaaggactaacttgagaattctgtcaaac 52865969  T
Q  167 taaaaggactaaaa 180  Q
    ||||||||| ||||    
T  52865968 taaaaggacaaaaa 52865955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 52866367 - 52866410
Alignment:
Q  68 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 111  Q
    ||||||||||||| |||| |||||||||||||||||||||||||    
T  52866367 tttgaaacttaaaggactaacttgggaattctgtcaaactaaaa 52866410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 30543095 - 30543133
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaa 52  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  30543095 gacaacaggggtaacggtgaaatagtttatcaattaaaa 30543133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 2508323 - 2508270
Alignment:
Q  58 atttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 111  Q
    ||||||||| |||||| |||||| |||| |||||| ||||||||||||||||||    
T  2508323 atttgaaacttttgaagcttaaaggactaacttggaaattctgtcaaactaaaa 2508270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 5387584 - 5387677
Alignment:
Q  19 caggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 111  Q
    ||||||||||||||||||| |||||||| | |||| || |||||||||| ||| ||| ||||| | || ||||  ||||| |||||||||||||    
T  5387584 caggggtaacggtgaaataatttatcaagtgaaagtacatatttgaaacttttaaaatttaaaggtcttacttaagaattttgtcaaactaaaa 5387677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 52181847 - 52181779
Alignment:
Q  107 taaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    ||||||||| |  |||||||||| ||||||||||  ||||| |||||| || |||||||||||||||||    
T  52181847 taaaatgacatgtttgaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggac 52181779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 125
Target Start/End: Original strand, 35023955 - 35024050
Alignment:
Q  31 tgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaa 125  Q
    |||||||||||||||| ||||| || | |||  |||| ||| ||||||||| |||| ||||| ||||| ||| ||||||||| ||| |||||||||    
T  35023955 tgaaatagtttatcaactaaaaggatcaattaaaaacttttaaaacttaaaagactaacttgagaattgtgtaaaactaaaaagacataattgaaa 35024050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 175
Target Start/End: Complemental strand, 52567818 - 52567747
Alignment:
Q  104 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    ||||||||||||||| || ||||||| ||||||||||  ||||| ||  || || |||||||||||||||||    
T  52567818 aactaaaatgacctatttaaaacttttgaaacttaaatgactaacttaagaattctgtcaaactaaaaggac 52567747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 174
Target Start/End: Complemental strand, 8408477 - 8408407
Alignment:
Q  104 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 174  Q
    |||||||||||| || ||||||||||  |||||||||| ||| | ||| || || ||||||||||||||||    
T  8408477 aactaaaatgacttatttgaaacttttcaaacttaaaagacttacttgagaattttgtcaaactaaaagga 8408407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 44915999 - 44915937
Alignment:
Q  19 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaa 80  Q
    |||||||||| |||||||| |||||||| ||||| ||||| ||| |||| |||||||||||||    
T  44915999 caggggtaacagtgaaataatttatcaactaaaaagacctttttaaaacttttgaaacttaaa 44915937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 9320142 - 9320077
Alignment:
Q  107 taaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaag 172  Q
    |||||||| ||| |||||||||| |||| |||||  ||||||||| || || ||||||||||||||    
T  9320142 taaaatgatctatttgaaacttttgaaatttaaatgactaaattgagaattctgtcaaactaaaag 9320077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 19631916 - 19631871
Alignment:
Q  22 gggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaac 66  Q
    |||||||||| |||||||||||||| ||||| ||||||||||||||    
T  19631916 gggtaacggtaaaatagtttatcaactaaaatgacctatttgaaac 19631871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 180
Target Start/End: Original strand, 19632235 - 19632310
Alignment:
Q  104 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    |||||||||||| || || ||||||| ||||||| ||| ||||| ||| || || ||||||||||||||||| ||||    
T  19632235 aactaaaatgacatatttaaaacttttgaaactt-aaagactaatttgagaattctgtcaaactaaaaggaccaaaa 19632310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 180
Target Start/End: Complemental strand, 35023821 - 35023745
Alignment:
Q  104 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    ||||||||||| ||||||||||||||  |||| ||||| ||||| ||   | || | ||||||||||||||||||||    
T  35023821 aactaaaatgatctaattgaaacttttaaaacgtaaaagactaatttaataattctttcaaactaaaaggactaaaa 35023745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 35046555 - 35046603
Alignment:
Q  123 aaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaa 171  Q
    ||||||| ||||||||||  ||||| |||||| ||||||||||||||||    
T  35046555 aaacttttgaaacttaaaggactaacttgggaattatgtcaaactaaaa 35046603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 1e-50; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 22 - 171
Target Start/End: Original strand, 9276960 - 9277109
Alignment:
Q  22 gggtaacggtgaaatagtttatcaattaaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaatt 121  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||| |||||| |||||| ||||||||||| || ||||||    
T  9276960 gggtaacggtgaaatagtttatcaactaaaagacctatttgaaacttttgaaacttaaaggactaacttggaaattctatcaaactaaaaggatctaatt 9277059  T
Q  122 gaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaa 171  Q
    |||||||||||||||||||| ||||| |||||| || |||||||||||||    
T  9277060 gaaactttcgaaacttaaaagactaacttgggaattctgtcaaactaaaa 9277109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 9770768 - 9770920
Alignment:
Q  29 ggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaact 127  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||| |||||||||||    
T  9770768 ggtgaaatagtttatcaactaaaaggacctatttgaaacttttgaaaattaaaggactaacttgggaattctgtcaaactaaaatgacttaattgaaact 9770867  T
Q  128 ttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    |||||||||||||  ||||| ||| || || ||||||||||||||||| ||||    
T  9770868 ttcgaaacttaaaggactaacttgagaattttgtcaaactaaaaggaccaaaa 9770920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 30576632 - 30576788
Alignment:
Q  19 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 117  Q
    |||||||||||||||||||||||||||| ||||| ||| ||||| |||| ||||||||||||| |||| ||||||||||||||||||||||||| |||||    
T  30576632 caggggtaacggtgaaatagtttatcaactaaaatgacatatttaaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggacct 30576731  T
Q  118 aattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 174  Q
    |||||||||||| |||||||| || ||||| |||  | || ||||||||||||||||    
T  30576732 aattgaaacttttgaaacttagaagactaacttgaaaattctgtcaaactaaaagga 30576788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 27 - 175
Target Start/End: Complemental strand, 36360053 - 36359904
Alignment:
Q  27 acggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaa 125  Q
    ||||| |||||||||||||| ||||| |||||||||||||| ||| ||||||||| |||| |||||||||||||||||||||||||  ||||||||||||    
T  36360053 acggtaaaatagtttatcaactaaaatgacctatttgaaacttttaaaacttaaaggactaacttgggaattctgtcaaactaaaaatacctaattgaaa 36359954  T
Q  126 ctttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    |||||||||||||||  ||||| |||| | || |||||||||||||||||    
T  36359953 ctttcgaaacttaaaggactaacttggaaattctgtcaaactaaaaggac 36359904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 45017899 - 45017745
Alignment:
Q  27 acggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaa 125  Q
    |||||||||||||||||||||||||| ||| |||||||||  |||||| |||||| |||| | ||||||||||||| ||||||||||||| |||||||||    
T  45017899 acggtgaaatagtttatcaattaaaatgacttatttgaaatttttgaatcttaaaggactaatttgggaattctgttaaactaaaatgacataattgaaa 45017800  T
Q  126 ctttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    |||||||||||||||  ||||| |||||| || | ||||||||||||||| ||||    
T  45017799 ctttcgaaacttaaaggactaacttgggaattctatcaaactaaaaggaccaaaa 45017745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 14 - 174
Target Start/End: Complemental strand, 23553520 - 23553359
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| |||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||| ||||| |||  ||||| ||||| |||||||||||||     
T  23553520 gacagcaggggtaacggtgaaatagtttatcaactaaaatgacctatttgaaacttttgaaatttaaaagaccaacttgagaattttgtcaaactaaaag 23553421  T
Q  113 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 174  Q
    ||||||||||||||||||||||||||||  |  || ||| || || ||||||||||||||||    
T  23553420 gacctaattgaaactttcgaaacttaaaggatcaagttgagaattctgtcaaactaaaagga 23553359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 23 - 197
Target Start/End: Complemental strand, 9276639 - 9276462
Alignment:
Q  23 ggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaatt 121  Q
    |||||| ||||||||||||||||| |||||| ||||||||||||| ||| |||||||| ||||| ||||| |||||||||||||||| || |||||||||    
T  9276639 ggtaacagtgaaatagtttatcaactaaaaggacctatttgaaacttttaaaacttaactgactaacttgagaattctgtcaaactataaagacctaatt 9276540  T
Q  122 gaaactttcgaaacttaaaa-tactaaattgggagttatgtcaaactaaaaggactaaaa-tgatttttgacctaaaa 197  Q
    ||||||||| ||||||||||  ||||  ||| || || ||||||||||||||||| |||| |||| |||| |||||||    
T  9276539 gaaactttcaaaacttaaaagaactattttgagaattttgtcaaactaaaaggaccaaaagtgatatttggcctaaaa 9276462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 39701365 - 39701522
Alignment:
Q  19 caggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 117  Q
    |||||||||| ||||| ||||||||||| |||||| ||||||||||||  |||||||||||||||||| |  |||||||||| ||||||||||| ||| |    
T  39701365 caggggtaacagtgaagtagtttatcaactaaaaggacctatttgaaagttttgaaacttaaatgactaatctgggaattctatcaaactaaaaggactt 39701464  T
Q  118 aattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    |||||||||||| ||||||||||  ||||| ||| || || |||||||||||||||||    
T  39701465 aattgaaacttttgaaacttaaagaactaacttgagaattctgtcaaactaaaaggac 39701522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 8 - 180
Target Start/End: Original strand, 44041249 - 44041422
Alignment:
Q  8 gagatggacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaac 106  Q
    ||||| ||||||| |||||| |||||||||||||||||| ||||| ||| |||||||||  |||||||||| || |||| |||| |||||||||||||||    
T  44041249 gagattgacatcatgggtaatggtgaaatagtttatcaactaaaatgacttatttgaaatttttgaaactttaaagactaacttaggaattctgtcaaac 44041348  T
Q  107 taaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    ||||| ||| |||||||||||||| |||||||||  ||||| |||  | || ||||||||||||||||| ||||    
T  44041349 taaaaggacataattgaaactttcaaaacttaaaggactaacttgaaaattttgtcaaactaaaaggacaaaaa 44041422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 14 - 175
Target Start/End: Complemental strand, 39701050 - 39700888
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| |||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||| || | |||| |||||| |||||||||||||     
T  39701050 gacagcaggggtaacggtgaaatagtttatcaactaaaatgacatatttgaaacttttgaaacttaaaggattaacttaggaattttgtcaaactaaaag 39700951  T
Q  113 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    ||| |||||||||||||  |||||||||  ||||| ||  || || |||||||||||||||||    
T  39700950 gacataattgaaacttttaaaacttaaaggactaacttaagaattttgtcaaactaaaaggac 39700888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 25730095 - 25730252
Alignment:
Q  19 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 117  Q
    |||||||||| ||||||||||||||||| ||||| ||| |||||||||| ||||||| ||||| |||| ||||| ||||||||||||| |||||||||||    
T  25730095 caggggtaacagtgaaatagtttatcaactaaaatgacatatttgaaacttttgaaatttaaaggactaacttgagaattctgtcaaattaaaatgacct 25730194  T
Q  118 aa-ttgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 174  Q
    || ||||||||||| |||||||||  ||||| |||| | || | ||||||||||||||    
T  25730195 aatttgaaactttcaaaacttaaaggactaacttggaaattctatcaaactaaaagga 25730252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 16197194 - 16197027
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| |||| |||| ||||||||| ||||| || |||||| |||||||||| || |||||||||||||||| | |||||||||||||||||||||||||     
T  16197194 gacaacaggcgtaatggtgaaataatttattaactaaaaggacctatttgatacttttgaaacttaaatgattaacttgggaattctgtcaaactaaaag 16197095  T
Q  113 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    ||| |||||||||||||||||||||||   ||||| |||  | || |||||||| |||||||| ||||    
T  16197094 gacataattgaaactttcgaaacttaatggactaacttgataattctgtcaaacgaaaaggaccaaaa 16197027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 29794238 - 29794392
Alignment:
Q  27 acggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaa 125  Q
    ||||||||||| |||||||| |||||| | ||||||||||| ||||||||||||| |||| |||||| |||| ||||||||||||| ||||||||  |||    
T  29794238 acggtgaaataatttatcaactaaaaggatctatttgaaacttttgaaacttaaaagactaacttggaaattatgtcaaactaaaaggacctaatgaaaa 29794337  T
Q  126 ctttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    ||||||||| |||||  ||||| |||||| || ||||||||||||| ||| ||||    
T  29794338 ctttcgaaatttaaaggactaacttgggaattctgtcaaactaaaatgaccaaaa 29794392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 180
Target Start/End: Complemental strand, 8714003 - 8713844
Alignment:
Q  22 gggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaat 120  Q
    |||||||||||||| | |||||||| ||||| || ||||||||||  ||||||||||||| |||| ||||| ||||| |||||||||||||  |  ||||    
T  8714003 gggtaacggtgaaacaatttatcaactaaaatgatctatttgaaatttttgaaacttaaaagactaacttgtgaattttgtcaaactaaaagaatttaat 8713904  T
Q  121 tgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    ||||||||| ||||||||||  ||||| ||| || |||||||||||||||||||| ||||    
T  8713903 tgaaacttttgaaacttaaaggactaacttgagaattatgtcaaactaaaaggaccaaaa 8713844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 14 - 175
Target Start/End: Complemental strand, 25737269 - 25737107
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| |||| |||||| |||||||||||||||| ||||| ||| ||| |||||| ||||||| ||||| |||| |||| ||||||| ||||||||||||     
T  25737269 gacagcaggtgtaacgatgaaatagtttatcaagtaaaatgacatatgtgaaacttttgaaatttaaaggactaacttaggaattcggtcaaactaaaag 25737170  T
Q  113 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    || ||| |||||||||| ||||||||||  ||||| |||  | ||||||||||||||||||||    
T  25737169 gatctatttgaaacttttgaaacttaaaggactaacttgaaaattatgtcaaactaaaaggac 25737107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 19 - 172
Target Start/End: Original strand, 25737581 - 25737736
Alignment:
Q  19 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 117  Q
    |||||||||| ||||||||||||||||| ||||| ||  |||||||||| ||||||| ||||| |||| ||||| ||||||||||||| ||||| |||||    
T  25737581 caggggtaacagtgaaatagtttatcaactaaaatgaaatatttgaaacttttgaaatttaaaggactaacttgagaattctgtcaaattaaaaagacct 25737680  T
Q  118 aa-ttgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaag 172  Q
    || ||||||||||| |||||||||  ||||| |||| | || | ||||||||||||    
T  25737681 aatttgaaactttcaaaacttaaaggactaacttggaaattctatcaaactaaaag 25737736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 30 - 180
Target Start/End: Complemental strand, 30576301 - 30576150
Alignment:
Q  30 gtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactt 128  Q
    ||||||||||||||||| ||||| |||| ||||||||| ||| ||||||||| |||| |||||| ||||||| |||||||||| ||| ||||||||||||    
T  30576301 gtgaaatagtttatcaactaaaaagaccaatttgaaacttttcaaacttaaaagactaacttggaaattctggcaaactaaaaggacttaattgaaactt 30576202  T
Q  129 tcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    || ||| |||||  ||||| |||||| || |||||| |||||| ||| ||||    
T  30576201 tcaaaatttaaaggactaacttgggaattctgtcaagctaaaaagaccaaaa 30576150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 67 - 175
Target Start/End: Original strand, 40553260 - 40553368
Alignment:
Q  67 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 166  Q
    ||||||||||||||||| | ||||| ||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| || | | || ||||||||    
T  40553260 atttgaaacttaaatgattaacttgagaattctgtcaaactaaaaggaccaaattgaaacttttgaaacttaaaagactaacttagaaattttgtcaaac 40553359  T
Q  167 taaaaggac 175  Q
    |||||||||    
T  40553360 taaaaggac 40553368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 67 - 174
Target Start/End: Complemental strand, 11113662 - 11113555
Alignment:
Q  67 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 166  Q
    |||||||||||||| |||| |||||| |||||||||||||||||| ||||| |||||||||||| ||| |||||  ||||| || ||| |||||||||||    
T  11113662 atttgaaacttaaaggactaacttggaaattctgtcaaactaaaaggacctgattgaaactttcaaaatttaaaggactaacttaggaattatgtcaaac 11113563  T
Q  167 taaaagga 174  Q
    ||||||||    
T  11113562 taaaagga 11113555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 172
Target Start/End: Complemental strand, 43422983 - 43422864
Alignment:
Q  53 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgg 152  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||| ||  ||| ||||| |||||||||||||||||| |||||||||  ||||| |||     
T  43422983 gacctatttgaaacttttgaaacttaaaggactaacttgggaattttgctaaaataaaaggacctaattgaaactttcaaaacttaaaggactaatttga 43422884  T
Q  153 gagttatgtcaaactaaaag 172  Q
    || |||| ||||||||||||    
T  43422883 gaattatatcaaactaaaag 43422864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 43423100 - 43423226
Alignment:
Q  53 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgg 152  Q
    |||||||||||||| ||||||||||||| || | | ||| ||||||| | ||||||||| ||| ||||||||||||||||||||||||  ||||| || |    
T  43423100 gacctatttgaaacttttgaaacttaaaggagtaaattgagaattctatgaaactaaaa-gacttaattgaaactttcgaaacttaaataactaacttag 43423198  T
Q  153 gagttatgtcaaactaaaaggactaaaa 180  Q
    || |||||||||||||||||||| ||||    
T  43423199 gaattatgtcaaactaaaaggaccaaaa 43423226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 14 - 171
Target Start/End: Original strand, 31169452 - 31169609
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    ||||||| |||||||||||||||| |||||||| ||||| ||| |||||||||| ||| ||||||||| |||| | ||| |||||  |||||||||||||    
T  31169452 gacatcacgggtaacggtgaaatattttatcaactaaaatgacatatttgaaacttttaaaacttaaaggactaatttgagaatttcgtcaaactaaaat 31169551  T
Q  113 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaa 171  Q
    || ||| ||||||||||  |||||||||  ||||| ||| || || |||||||||||||    
T  31169552 gatctatttgaaacttt-aaaacttaaaggactaacttgagaattttgtcaaactaaaa 31169609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 59 - 181
Target Start/End: Original strand, 36360088 - 36360210
Alignment:
Q  59 tttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagtta 158  Q
    |||||||| ||||||||||||| |||| |||||| |||| ||||||| ||||| ||| || |||||||||||||||||||||| ||||| |||| | ||     
T  36360088 tttgaaacttttgaaacttaaaggactaacttggcaattttgtcaaattaaaaagacttatttgaaactttcgaaacttaaaagactaacttggaaattc 36360187  T
Q  159 tgtcaaactaaaaggactaaaat 181  Q
    ||||||||||||| ||| |||||    
T  36360188 tgtcaaactaaaatgaccaaaat 36360210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 67 - 174
Target Start/End: Complemental strand, 9770672 - 9770565
Alignment:
Q  67 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 166  Q
    ||||||||||||||||||| ||||| ||||||| ||||||||||| ||| ||||||||||||||||||||||||  | ||| |||||| || |||||| |    
T  9770672 atttgaaacttaaatgactaacttgagaattctctcaaactaaaaggacttaattgaaactttcgaaacttaaatgattaacttgggaattctgtcaatc 9770573  T
Q  167 taaaagga 174  Q
    || |||||    
T  9770572 tacaagga 9770565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 13771843 - 13771937
Alignment:
Q  23 ggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    |||||| ||||||| ||||||||| ||||| ||| |||||||||| ||||||||||||| |||| ||||||||||| ||||||||||||||||||    
T  13771843 ggtaacagtgaaatggtttatcaaataaaatgacatatttgaaacttttgaaacttaaaggactaacttgggaattatgtcaaactaaaatgacc 13771937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 172
Target Start/End: Original strand, 23553840 - 23553994
Alignment:
Q  19 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 117  Q
    |||||||||| |||||||| ||||| || ||| | || ||||||||||| |||||||||| |   ||| ||||| ||||||| ||||||||||||||| |    
T  23553840 caggggtaacagtgaaataatttattaactaacatgatctatttgaaacttttgaaacttgaggaactaacttgagaattctatcaaactaaaatgactt 23553939  T
Q  118 aattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaag 172  Q
    |||| |||| |||||||||||||| ||||| ||  || || ||||||||||||||    
T  23553940 aattaaaacattcgaaacttaaaagactaactttagaattctgtcaaactaaaag 23553994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 174
Target Start/End: Original strand, 8714330 - 8714482
Alignment:
Q  23 ggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaatt 121  Q
    |||||| ||||||||||||||||| ||||| ||||||||| |||| || ||||||||||  ||| ||||| ||||||| |||||||||||  | ||| ||    
T  8714330 ggtaacagtgaaatagtttatcaactaaaaagacctatttaaaactttagaaacttaaaaaactaacttgcgaattctatcaaactaaaagaatctattt 8714429  T
Q  122 gaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 174  Q
    |||||||| ||| ||||||  ||||| |||| | || | ||||||||||||||    
T  8714430 gaaacttttgaatcttaaaggactaacttggaaattctatcaaactaaaagga 8714482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 180
Target Start/End: Original strand, 40553313 - 40553433
Alignment:
Q  60 ttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttat 159  Q
    ||||||| ||||||||||||| |||| |||| | |||| ||||||||||||| ||||| |||||||||||  ||||| |||  ||||| || ||| ||||    
T  40553313 ttgaaacttttgaaacttaaaagactaacttagaaattttgtcaaactaaaaggacctgattgaaactttttaaactcaaaggactaagttaggaattat 40553412  T
Q  160 gtcaaactaaaaggactaaaa 180  Q
    |||||||||||||||| ||||    
T  40553413 gtcaaactaaaaggaccaaaa 40553433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 172
Target Start/End: Original strand, 41190293 - 41190397
Alignment:
Q  68 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 167  Q
    ||||||||||||||||||   ||| ||||||| ||||||||||||||||||||||||| |||||||| |||||  ||||| ||| || || |||||||||    
T  41190293 tttgaaacttaaatgactagattgagaattctatcaaactaaaatgacctaattgaaattttcgaaatttaaagaactaatttgagaattctgtcaaact 41190392  T
Q  168 aaaag 172  Q
    |||||    
T  41190393 aaaag 41190397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 4613900 - 4613778
Alignment:
Q  19 caggggtaacggtgaaatagtttatcaattaaaagac-ctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 117  Q
    ||||| || |||||||||||||||| || |||||||  ||||||||||| ||||||||||||| |||| ||| |  |||| ||||||||||||| ||| |    
T  4613900 cagggttagcggtgaaatagtttataaactaaaagaatctatttgaaacttttgaaacttaaaggactaactcgaaaattttgtcaaactaaaaggactt 4613801  T
Q  118 aattgaaactttcgaaacttaaa 140  Q
    ||||||||||||| ||| |||||    
T  4613800 aattgaaactttcaaaatttaaa 4613778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 67 - 180
Target Start/End: Original strand, 14871368 - 14871482
Alignment:
Q  67 atttgaaacttaaatgactgacttgggaattctgtcaaa-ctaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaa 165  Q
    |||||||||||||| |||| | ||| ||||| ||||||| ||||||  |||||||||||||||||||||||||||| ||||| || ||| || |||||||    
T  14871368 atttgaaacttaaaggactaatttgagaattatgtcaaaactaaaagaacctaattgaaactttcgaaacttaaaagactaacttaggaattctgtcaaa 14871467  T
Q  166 ctaaaaggactaaaa 180  Q
    || ||||||| ||||    
T  14871468 cttaaaggaccaaaa 14871482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 40552922 - 40552800
Alignment:
Q  19 caggggtaacggtgaaatagtttatcaattaaaaga-cctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 117  Q
    |||||||||| |||||||| |||||||||| ||||| |||||||||||  ||||||| ||||||| || |||||  |||| ||||||||||||||  | |    
T  40552922 caggggtaacagtgaaatattttatcaatttaaagaacctatttgaaatttttgaaatttaaatggctaacttgaaaattttgtcaaactaaaatatctt 40552823  T
Q  118 aattgaaactttcgaaacttaaa 140  Q
    ||||||||||||| ||| |||||    
T  40552822 aattgaaactttcaaaatttaaa 40552800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 13771518 - 13771425
Alignment:
Q  19 caggggtaacggtgaaatagtttatcaattaaaagac-ctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 111  Q
    |||||| || |||||||||||||||||| |||||||  ||||||||||| ||| |||||||||||||| |||||  ||||||||||||||||||    
T  13771518 caggggaaatggtgaaatagtttatcaactaaaagaatctatttgaaacttttaaaacttaaatgactaacttgaaaattctgtcaaactaaaa 13771425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 29792559 - 29792652
Alignment:
Q  87 acttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    ||||| ||||| ||||||||||||| || ||||| ||||||||||||| |||||  ||||| |||||| || ||||||||||||||||||||||    
T  29792559 acttgagaattatgtcaaactaaaaggatctaatagaaactttcgaaatttaaaggactaatttgggaattctgtcaaactaaaaggactaaaa 29792652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 5358754 - 5358650
Alignment:
Q  8 gagatggacatcaggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaac 106  Q
    ||||| |||| |||||||||| | ||||||||||||||| |||||| |||||||| |||| |||||||||| || |||| |||||  |||||||||||||    
T  5358754 gagattgacagcaggggtaacagcgaaatagtttatcaactaaaaggacctatttaaaacttttgaaacttgaaggactaacttgaaaattctgtcaaac 5358655  T
Q  107 taaaa 111  Q
    |||||    
T  5358654 taaaa 5358650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 175
Target Start/End: Original strand, 6236250 - 6236358
Alignment:
Q  67 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 166  Q
    ||||||||||||||  ||| ||||||||| ||||||||| ||||| ||||||||||||||| | ||||||||||  | ||| |||||| || ||| ||||    
T  6236250 atttgaaacttaaagtactaacttgggaagtctgtcaaattaaaaggacctaattgaaactattgaaacttaaagaaataacttgggaattttgtaaaac 6236349  T
Q  167 taaaaggac 175  Q
    |||||||||    
T  6236350 taaaaggac 6236358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 147
Target Start/End: Complemental strand, 39700943 - 39700856
Alignment:
Q  60 ttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaa 147  Q
    ||||||| ||| ||||||||| |||| ||||  ||||| ||||||||||||| |||||||||||||||||| |||||||||| |||||    
T  39700943 ttgaaacttttaaaacttaaaggactaacttaagaattttgtcaaactaaaaggacctaattgaaactttcaaaacttaaaagactaa 39700856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 43423028 - 43422921
Alignment:
Q  68 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 167  Q
    ||||||| ||||| |||| |||||| |||| |||||||||||||||||||| |||||||||| ||||||||||  ||||| |||||| || ||  ||| |    
T  43423028 tttgaaatttaaaggactaacttggaaattttgtcaaactaaaatgacctatttgaaacttttgaaacttaaaggactaacttgggaattttgctaaaat 43422929  T
Q  168 aaaaggac 175  Q
    ||||||||    
T  43422928 aaaaggac 43422921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 45017934 - 45018053
Alignment:
Q  59 tttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagtta 158  Q
    |||||||  ||||||||||||| |||| |||||| | ||  |||||||||||| ||||||||| ||||||||||||||||||  ||||| |||    ||     
T  45017934 tttgaaatttttgaaacttaaaggactaacttggaactt--gtcaaactaaaaggacctaattaaaactttcgaaacttaaaggactaacttgaagattt 45018031  T
Q  159 tgtcaaactaaaaggactaaaa 180  Q
    ||||||||||||||||||||||    
T  45018032 tgtcaaactaaaaggactaaaa 45018053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 96 - 180
Target Start/End: Original strand, 36314697 - 36314781
Alignment:
Q  96 ttctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    |||||||||||||||| ||| |||||||||||||||||| |||||| ||||| |||  | || ||||||||||||||||| ||||    
T  36314697 ttctgtcaaactaaaaggacataattgaaactttcgaaatttaaaagactaacttgataattttgtcaaactaaaaggaccaaaa 36314781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 35433994 - 35433899
Alignment:
Q  22 gggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    ||||||| |||||||| |||||||| ||||| || |||||| |||| |||||||||||||||||| ||||| ||||||| ||||| ||||| ||||    
T  35433994 gggtaacagtgaaataatttatcaactaaaaagatctatttaaaacttttgaaacttaaatgactaacttgtgaattctatcaaattaaaaggacc 35433899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 35434313 - 35434400
Alignment:
Q  30 gtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    ||||||||||||||||| ||||| ||| |||||||||| ||||||||||||| || | |||| |||||| ||||||||||||| ||||    
T  35434313 gtgaaatagtttatcaactaaaatgacatatttgaaacttttgaaacttaaaggattaacttaggaattatgtcaaactaaaaggacc 35434400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 36360138 - 36360205
Alignment:
Q  49 aaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    ||||||| |||||||||| || |||||||||| |||| |||||| |||||||||||||||||||||||    
T  36360138 aaaagacttatttgaaactttcgaaacttaaaagactaacttggaaattctgtcaaactaaaatgacc 36360205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 59 - 128
Target Start/End: Complemental strand, 9770731 - 9770662
Alignment:
Q  59 tttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactt 128  Q
    |||||||  ||||||||||||| |||| |||| |||||||||||||||||||| |||||| |||||||||    
T  9770731 tttgaaatttttgaaacttaaaggactaacttcggaattctgtcaaactaaaaggacctatttgaaactt 9770662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 171
Target Start/End: Original strand, 16208674 - 16208815
Alignment:
Q  31 tgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaacttt 129  Q
    |||||||||||||||| |||||| || |||||||||| ||||||||| ||| |||| |||||  |||||| | |||||||||||| ||| ||||||  |     
T  16208674 tgaaatagtttatcaactaaaaggacatatttgaaacttttgaaactcaaaggactaacttgaaaattctataaaactaaaatgatctatttgaaatcta 16208773  T
Q  130 cgaaacttaaaatactaaattgggagttatgtcaaactaaaa 171  Q
      |||||||||  ||||| ||| || || |||||||||||||    
T  16208774 taaaacttaaagaactaacttgagaattctgtcaaactaaaa 16208815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 24 - 116
Target Start/End: Original strand, 34686875 - 34686968
Alignment:
Q  24 gtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    ||||||||||||||||||||||| ||||| ||||||||| |||| ||| ||| ||||| |||| |||||  |||||||||||| ||||| ||||    
T  34686875 gtaacggtgaaatagtttatcaactaaaaggacctatttaaaacttttaaaatttaaaggactaacttgataattctgtcaaattaaaaggacc 34686968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 43423074 - 43423127
Alignment:
Q  87 acttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaa 140  Q
    ||||||||||| |||||||||||||||||||| |||||||||| ||||||||||    
T  43423074 acttgggaattttgtcaaactaaaatgacctatttgaaacttttgaaacttaaa 43423127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 114
Target Start/End: Complemental strand, 6235895 - 6235793
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaagac-ctatttgaaacatttgaaacttaaatgactgacttg-ggaattctgtcaaactaaaa 111  Q
    |||| ||| ||||| |||||||||||||||||| ||||| |  ||||||||||| ||||||| ||||| || | ||||  ||||||||||||||||||||    
T  6235895 gacagcagaggtaaaggtgaaatagtttatcaactaaaatagtctatttgaaacttttgaaatttaaaggattaactttcggaattctgtcaaactaaaa 6235796  T
Q  112 tga 114  Q
    |||    
T  6235795 tga 6235793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 9277058 - 9277112
Alignment:
Q  60 ttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatga 114  Q
    ||||||| || |||||||||| |||| ||||||||||||||||||||||||||||    
T  9277058 ttgaaactttcgaaacttaaaagactaacttgggaattctgtcaaactaaaatga 9277112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 180
Target Start/End: Original strand, 13771868 - 13771941
Alignment:
Q  107 taaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    ||||||||| || |||||||||| ||||||||||  ||||| |||||| |||||||||||||||| ||| ||||    
T  13771868 taaaatgacatatttgaaacttttgaaacttaaaggactaacttgggaattatgtcaaactaaaatgaccaaaa 13771941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 104 - 180
Target Start/End: Original strand, 35434328 - 35434404
Alignment:
Q  104 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    |||||||||||| || |||||||||| ||||||||||  | ||| || ||| |||||||||||||||||||| ||||    
T  35434328 aactaaaatgacatatttgaaacttttgaaacttaaaggattaacttaggaattatgtcaaactaaaaggaccaaaa 35434404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 116
Target Start/End: Complemental strand, 23179096 - 23179049
Alignment:
Q  69 ttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    |||||||||||| |||| ||||||||||||||||||||||||| ||||    
T  23179096 ttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggacc 23179049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 175
Target Start/End: Complemental strand, 23553489 - 23553418
Alignment:
Q  104 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    ||||||||||||||| |||||||||| |||| |||||| || || ||| || || |||||||||||||||||    
T  23553489 aactaaaatgacctatttgaaacttttgaaatttaaaagaccaacttgagaattttgtcaaactaaaaggac 23553418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 30576658 - 30576729
Alignment:
Q  104 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    |||||||||||| || || ||||||| ||||||||||  ||||| |||||| || |||||||||||||||||    
T  30576658 aactaaaatgacatatttaaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggac 30576729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 36359970 - 36359903
Alignment:
Q  49 aaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    |||| ||||| ||||||| || |||||||||| |||| |||||| |||||||||||||||||| ||||    
T  36359970 aaaatacctaattgaaactttcgaaacttaaaggactaacttggaaattctgtcaaactaaaaggacc 36359903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 44040922 - 44040860
Alignment:
Q  19 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaa 80  Q
    ||||| |||| ||||||||||||||||| ||||| ||||||||| |||| |||||||||||||    
T  44040922 cagggataacagtgaaatagtttatcaactaaaatgacctatttaaaacttttgaaacttaaa 44040860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 180
Target Start/End: Original strand, 29030175 - 29030252
Alignment:
Q  103 aaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    ||||||||| ||| ||||||||||||||||||||||||  | ||| |  ||| |||||||||||||||| ||| ||||    
T  29030175 aaactaaaaggacttaattgaaactttcgaaacttaaaggaataactaaggaattatgtcaaactaaaatgaccaaaa 29030252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 104 - 193
Target Start/End: Complemental strand, 44040896 - 44040808
Alignment:
Q  104 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaatgatttttgacct 193  Q
    ||||||||||||||| || ||||||| |||||||||||  |||| |||  | || ||| ||||||||||||| |||||||| ||||||||    
T  44040896 aactaaaatgacctatttaaaacttttgaaacttaaaa-gctaatttgtaaattctgttaaactaaaaggaccaaaatgatatttgacct 44040808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 25737166 - 25737106
Alignment:
Q  56 ctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    ||||||||||| ||||||||||||| |||| |||||  |||| ||||||||||||| ||||    
T  25737166 ctatttgaaacttttgaaacttaaaggactaacttgaaaattatgtcaaactaaaaggacc 25737106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 31169555 - 31169614
Alignment:
Q  56 ctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    ||||||||||| ||| ||||||||| |||| ||||| ||||| ||||||||||||||||||    
T  31169555 ctatttgaaac-tttaaaacttaaaggactaacttgagaattttgtcaaactaaaatgacc 31169614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 39701467 - 39701523
Alignment:
Q  60 ttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    ||||||| |||||||||||||  ||| ||||| ||||||||||||||||||| ||||    
T  39701467 ttgaaacttttgaaacttaaagaactaacttgagaattctgtcaaactaaaaggacc 39701523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 43423154 - 43423222
Alignment:
Q  48 taaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    |||||||| || ||||||| || ||||||||||| ||| |||| |||||| ||||||||||||| ||||    
T  43423154 taaaagacttaattgaaactttcgaaacttaaataactaacttaggaattatgtcaaactaaaaggacc 43423222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 14871416 - 14871478
Alignment:
Q  54 acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    ||||| ||||||| || |||||||||| |||| |||| |||||||||||||||| ||| ||||    
T  14871416 acctaattgaaactttcgaaacttaaaagactaacttaggaattctgtcaaacttaaaggacc 14871478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 9770619 - 9770575
Alignment:
Q  60 ttgaaacatttgaaacttaaatgactgacttgggaattctgtcaa 104  Q
    ||||||| || ||||||||||||| | ||||||||||||||||||    
T  9770619 ttgaaactttcgaaacttaaatgattaacttgggaattctgtcaa 9770575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 39701391 - 39701463
Alignment:
Q  104 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggact 176  Q
    |||||||| |||||| |||||| ||| ||||||||||  |||||  ||||| || | ||||||||||||||||    
T  39701391 aactaaaaggacctatttgaaagttttgaaacttaaatgactaatctgggaattctatcaaactaaaaggact 39701463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 3e-45; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 36196462 - 36196627
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| |||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| |||||||| |||||| ||||||||||||||||||     
T  36196462 gacagcaggggtaacggtgaaatagtttatcaactaaaatgacctatttgaaacttttgaaactcaaatgactaacttggaaattctgtcaaactaaaaa 36196561  T
Q  113 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    ||||||||||||||||||||||||||||  ||||| |||  | |  ||||||||||||||||| ||||    
T  36196562 gacctaattgaaactttcgaaacttaaaggactaatttgaaaat--tgtcaaactaaaaggaccaaaa 36196627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 27893519 - 27893686
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| ||||| ||||| |||||||||||||||| ||||| || ||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||     
T  27893519 gacaacagggttaacgatgaaatagtttatcaactaaaatgatctatttgaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaag 27893618  T
Q  113 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
     ||||||||||||||| |||||||||||  ||||| ||| || || ||||||||||||||||| ||||    
T  27893619 aacctaattgaaacttacgaaacttaaaggactaacttgagaattttgtcaaactaaaaggaccaaaa 27893686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 22 - 194
Target Start/End: Original strand, 31264125 - 31264301
Alignment:
Q  22 gggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaat 120  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||| |||||||||||||| ||| |||||| |||||||||||||||||| ||| ||||    
T  31264125 gggtgacggtgaaatagtttatcaactaaaaggacctatttgaaacttttgaaacttaaataactaacttggaaattctgtcaaactaaaaggacttaat 31264224  T
Q  121 tgaaactttcgaaacttaaaatac--taaattgggagttatgtcaaactaaaagga-ctaaaatgatttttgaccta 194  Q
    |||||||||||||||||||| |||  ||| |||| | || |||||||||||||||| | ||| |||| |||||||||    
T  31264225 tgaaactttcgaaacttaaagtactataacttggaaattctgtcaaactaaaaggatcaaaagtgatatttgaccta 31264301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 24 - 140
Target Start/End: Complemental strand, 19080784 - 19080667
Alignment:
Q  24 gtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattg 122  Q
    ||||||||||||||||||||||| |||||| |||||| |||||| ||||||||||||||| || |||||  |||||||||||||||||||||||||||||    
T  19080784 gtaacggtgaaatagtttatcaactaaaaggacctatatgaaacttttgaaacttaaatgtctaacttgaaaattctgtcaaactaaaatgacctaattg 19080685  T
Q  123 aaactttcgaaacttaaa 140  Q
    |||||||| |||||||||    
T  19080684 aaactttcaaaacttaaa 19080667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 29 - 174
Target Start/End: Complemental strand, 34336185 - 34336039
Alignment:
Q  29 ggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaact 127  Q
    ||||||||||||||| || ||||| ||||||||| |||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||    
T  34336185 ggtgaaatagtttattaactaaaaagacctatttaaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaatgacataattgaaact 34336086  T
Q  128 ttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 174  Q
    ||| |||||||||  ||||| |||  | || | ||||||||||||||    
T  34336085 ttcaaaacttaaaggactaatttgaaaattttatcaaactaaaagga 34336039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 56 - 189
Target Start/End: Complemental strand, 30907196 - 30907063
Alignment:
Q  56 ctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggag 155  Q
    ||||||||||| ||||||||||||| |||| ||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||| ||     
T  30907196 ctatttgaaacttttgaaacttaaaggactaacttgagaattatgtcaaactaaaaggacctaattgaaactttcgaaacttaaaagactaacttgagaa 30907097  T
Q  156 ttatgtcaaactaaaaggactaaaatgatttttg 189  Q
    || ||||||||||||||  | |||||||| ||||    
T  30907096 ttctgtcaaactaaaagaccaaaaatgatatttg 30907063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 54 - 180
Target Start/End: Complemental strand, 31264049 - 31263923
Alignment:
Q  54 acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattggg 153  Q
    ||||||||||||| ||||||||||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||  | ||| ||||     
T  31264049 acctatttgaaacttttgaaacttaaaggactaacttgagaattctgtcaaactaaaaggacctaattgaaactttcgaaacttaaaggattaacttgga 31263950  T
Q  154 agttatgtcaaactaaaaggactaaaa 180  Q
    | || ||||||||||||| ||| ||||    
T  31263949 aattctgtcaaactaaaaagaccaaaa 31263923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 30907253 - 30907137
Alignment:
Q  59 tttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagtta 158  Q
    |||||||| |||||||||||||||||| ||||||||||| |||||| |||||| || ||| |||||||||| ||||||||||  ||||| ||| || |||    
T  30907253 tttgaaacttttgaaacttaaatgactaacttgggaattatgtcaatctaaaaggatctatttgaaacttttgaaacttaaaggactaacttgagaatta 30907154  T
Q  159 tgtcaaactaaaaggac 175  Q
    |||||||||||||||||    
T  30907153 tgtcaaactaaaaggac 30907137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 30907288 - 30907440
Alignment:
Q  27 acggtgaaatagtttatcaattaaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaac-taaaatgacctaattgaaa 125  Q
    |||| |||||| |||||||  |||| ||| |||||||||| ||||||||||||| |||| ||||| ||||||| |||||| ||||| |||||||||||||    
T  30907288 acggcgaaataatttatca--taaatgacttatttgaaacttttgaaacttaaaggactaacttgagaattctttcaaacttaaaaggacctaattgaaa 30907385  T
Q  126 ctttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    |||||||||||||||  ||||| ||   | || |||||||||||||||| |||||    
T  30907386 ctttcgaaacttaaatgactaacttataaattttgtcaaactaaaaggattaaaa 30907440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 170
Target Start/End: Complemental strand, 37543057 - 37542956
Alignment:
Q  68 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 167  Q
    ||||||||||||| |||| |||||| |||| ||||||||||||||||| ||||| ||||||||||||||||||| ||||| || | |||| |||||||||    
T  37543057 tttgaaacttaaaggactaacttggaaattatgtcaaactaaaatgacttaattaaaactttcgaaacttaaaagactaactt-gaagttctgtcaaact 37542959  T
Q  168 aaa 170  Q
    |||    
T  37542958 aaa 37542956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 49 - 139
Target Start/End: Original strand, 39376401 - 39376491
Alignment:
Q  49 aaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaa 139  Q
    |||||||||||||||||| ||||||||||||| |||| |||||| |||||||||||  ||||| ||||||||  |||||||||||||||||    
T  39376401 aaaagacctatttgaaacgtttgaaacttaaaggactaacttggaaattctgtcaatttaaaaagacctaatcaaaactttcgaaacttaa 39376491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 11871714 - 11871835
Alignment:
Q  19 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 117  Q
    ||||||||||||| ||||| |||||||| ||||| ||| ||||| |||| ||||||||||||| |||| ||| | ||||||||||||||||| | ||| |    
T  11871714 caggggtaacggttaaataatttatcaactaaaatgacatatttaaaacttttgaaacttaaaggactaactcgagaattctgtcaaactaagaggacat 11871813  T
Q  118 aattgaaactttcgaaacttaa 139  Q
    |||||||| |||| ||||||||    
T  11871814 aattgaaagtttcaaaacttaa 11871835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 175
Target Start/End: Complemental strand, 27893146 - 27893038
Alignment:
Q  67 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 166  Q
    |||||||||||||| |||| |||||||||| |||||||||||||| ||  |||||||||||||||||| |||||  | ||| ||| || || ||||||||    
T  27893146 atttgaaacttaaaggactaacttgggaatactgtcaaactaaaaagatataattgaaactttcgaaatttaaaggattaacttgagaattctgtcaaac 27893047  T
Q  167 taaaaggac 175  Q
    |||||||||    
T  27893046 taaaaggac 27893038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 56 - 171
Target Start/End: Complemental strand, 8260507 - 8260392
Alignment:
Q  56 ctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggag 155  Q
    ||||||||||| ||||||| ||||| || | | ||| ||| |||||||||||||||||| |||||||||||||||||||||||||  ||||| ||| ||     
T  8260507 ctatttgaaacttttgaaaattaaaagagtaatttgagaactctgtcaaactaaaatgatctaattgaaactttcgaaacttaaaggactaatttgagaa 8260408  T
Q  156 ttatgtcaaactaaaa 171  Q
    || ||| |||||||||    
T  8260407 ttctgtaaaactaaaa 8260392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 20535608 - 20535509
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaac-ttaaatgactgacttgggaattctgtcaaactaaaa 111  Q
    |||| ||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||| |||||  |||| ||| |||||||||    
T  20535608 gacagcagggataacggtgaaatagtttatcaactaaaatgacctatttgaaacatttgaaactttaaatgactaacttgataattatgttaaactaaaa 20535509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 57 - 199
Target Start/End: Original strand, 34336276 - 34336419
Alignment:
Q  57 tatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagt 156  Q
    |||||||||| ||||||| |||||  ||| | ||| ||||| ||||||| ||||| ||| ||| |||||||||||||| |||||  ||||| ||| || |    
T  34336276 tatttgaaacttttgaaatttaaagaactaatttgagaattttgtcaaattaaaaggacttaactgaaactttcgaaatttaaaggactaatttgagaat 34336375  T
Q  157 tatgtcaaactaaaaggactaaaa-tgatttttgacctaaaata 199  Q
    | ||||||||||||||||| |||| |||| ||||||||||||||    
T  34336376 tctgtcaaactaaaaggaccaaaagtgatatttgacctaaaata 34336419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 180
Target Start/End: Original strand, 16781049 - 16781175
Alignment:
Q  55 cctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaa-tactaaattggg 153  Q
    |||| ||||||| ||||||| ||||| |||| ||||| ||||| ||||||||||||| ||||||||| |||||||| ||||||||||  ||||| ||| |    
T  16781049 cctaattgaaacttttgaaatttaaaggactaacttgtgaattttgtcaaactaaaaggacctaattaaaactttcaaaacttaaaaggactaacttgag 16781148  T
Q  154 agttatgtcaaactaaaaggactaaaa 180  Q
    | || ||||||||||||| ||| ||||    
T  16781149 aattctgtcaaactaaaatgaccaaaa 16781175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 124
Target Start/End: Complemental strand, 15506145 - 15506040
Alignment:
Q  20 aggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgaccta 118  Q
    |||| |||||||||||||||||||||||||||| ||||| ||| |||| ||| ||||||||| || | | ||| ||||| ||||||||||||| ||||||    
T  15506145 agggttaacggtgaaatagtttatcaattaaaatgacctctttaaaactttttaaacttaaaggattaatttgagaattatgtcaaactaaaaggaccta 15506046  T
Q  119 attgaa 124  Q
    ||||||    
T  15506045 attgaa 15506040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 31264095 - 31263988
Alignment:
Q  68 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 167  Q
    |||||||||||||  ||| |||||||||||||||||||  ||||  ||||| |||||||||| ||||||||||  ||||| ||| || || |||||||||    
T  31264095 tttgaaacttaaagtactaacttgggaattctgtcaaagaaaaagaacctatttgaaacttttgaaacttaaaggactaacttgagaattctgtcaaact 31263996  T
Q  168 aaaaggac 175  Q
    ||||||||    
T  31263995 aaaaggac 31263988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 34429791 - 34429684
Alignment:
Q  68 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 167  Q
    ||||||||||||| || | |||||| |||||| ||||| ||||| ||||||||||||| |||||||| |||||  ||||| ||| || || |||||||||    
T  34429791 tttgaaacttaaaggattaacttggaaattctttcaaattaaaaggacctaattgaaattttcgaaatttaaaggactaacttgagaattctgtcaaact 34429692  T
Q  168 aaaaggac 175  Q
    ||||||||    
T  34429691 aaaaggac 34429684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 174
Target Start/End: Original strand, 41265257 - 41265364
Alignment:
Q  67 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 166  Q
    |||||||||||||| |||| ||||| ||||||||||||| ||| | ||| ||||||||||||||||||||||||  ||||| |||  | || | ||||||    
T  41265257 atttgaaacttaaaggactaacttgagaattctgtcaaattaagaggacataattgaaactttcgaaacttaaatgactaacttgataattctctcaaac 41265356  T
Q  167 taaaagga 174  Q
    ||||||||    
T  41265357 taaaagga 41265364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 42117172 - 42117268
Alignment:
Q  21 ggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    |||||||||||||||| ||||||||| |||||| |||||||| |||| ||||||||||||| |||| |||| | | ||||| |||||||||| ||||    
T  42117172 ggggtaacggtgaaattgtttatcaactaaaaggacctatttaaaacttttgaaacttaaaggactaacttagaatttctgacaaactaaaaggacc 42117268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 102 - 171
Target Start/End: Original strand, 19081055 - 19081124
Alignment:
Q  102 caaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaa 171  Q
    ||||||||||  |||||||||||||||||||||||||||| ||||| ||| || || |||||||||||||    
T  19081055 caaactaaaaacacctaattgaaactttcgaaacttaaaagactaatttgagaattctgtcaaactaaaa 19081124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 67 - 140
Target Start/End: Original strand, 20535966 - 20536039
Alignment:
Q  67 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaa 140  Q
    |||||||||||||| |||| ||||| ||||| ||||||||||||||||  ||||| ||||||||| ||||||||    
T  20535966 atttgaaacttaaaagactaacttgagaattatgtcaaactaaaatgatataattaaaactttcgtaacttaaa 20536039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 75 - 172
Target Start/End: Original strand, 37543100 - 37543197
Alignment:
Q  75 cttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaag 172  Q
    |||||| ||||  ||||| |||| ||||||||||||| ||| |||||||||||||| |||||||||| ||||| |||  | || ||||||||||||||    
T  37543100 cttaaaggactaccttggaaattatgtcaaactaaaaggacttaattgaaactttcaaaacttaaaagactaacttgaaaattctgtcaaactaaaag 37543197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 176
Target Start/End: Original strand, 34336227 - 34336335
Alignment:
Q  68 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 167  Q
    ||||||||||||| || | |||||  ||||||||||||||| || ||| || |||||||||| |||| |||||  ||||| ||| || || ||||||| |    
T  34336227 tttgaaacttaaaagattaacttgaaaattctgtcaaactacaaggacttatttgaaacttttgaaatttaaagaactaatttgagaattttgtcaaatt 34336326  T
Q  168 aaaaggact 176  Q
    |||||||||    
T  34336327 aaaaggact 34336335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 111
Target Start/End: Complemental strand, 30907139 - 30907081
Alignment:
Q  53 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 111  Q
    |||||| ||||||| || |||||||||| |||| ||||| |||||||||||||||||||    
T  30907139 gacctaattgaaactttcgaaacttaaaagactaacttgagaattctgtcaaactaaaa 30907081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 37543089 - 37543048
Alignment:
Q  87 acttgggaattctgtcaaactaaaatgacctaattgaaactt 128  Q
    |||||||||||||||||||||||||||||||  |||||||||    
T  37543089 acttgggaattctgtcaaactaaaatgacctgtttgaaactt 37543048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 31263990 - 31263927
Alignment:
Q  53 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    |||||| ||||||| || |||||||||| || | |||||| |||||||||||||||||| ||||    
T  31263990 gacctaattgaaactttcgaaacttaaaggattaacttggaaattctgtcaaactaaaaagacc 31263927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 19081062 - 19081124
Alignment:
Q  49 aaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 111  Q
    |||| ||||| ||||||| || |||||||||| |||| | ||| |||||||||||||||||||    
T  19081062 aaaacacctaattgaaactttcgaaacttaaaagactaatttgagaattctgtcaaactaaaa 19081124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 128
Target Start/End: Complemental strand, 5116956 - 5116895
Alignment:
Q  67 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactt 128  Q
    |||||||||||||| |||| | ||   |||| ||||||||||||| ||||||||||||||||    
T  5116956 atttgaaacttaaaggactaatttaaaaattttgtcaaactaaaaggacctaattgaaactt 5116895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 27893191 - 27893138
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaa-ttaaaagacctatttgaaac 66  Q
    |||| ||| ||||||| |||||||||||||||| | ||||||||||||||||||    
T  27893191 gacagcagaggtaacgttgaaatagtttatcaactaaaaagacctatttgaaac 27893138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 180
Target Start/End: Complemental strand, 39376284 - 39376172
Alignment:
Q  67 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 166  Q
    |||||||| ||||| |||| |||| ||||||| || ||||||||| || ||| ||||||||||| |||||| ||  || || ||| || |||||| ||||    
T  39376284 atttgaaatttaaa-gactaacttaggaattccgtaaaactaaaaggatctagttgaaactttcaaaacttgaaggaccaacttgagaattatgttaaac 39376186  T
Q  167 taaaaggactaaaa 180  Q
    ||||| ||| ||||    
T  39376185 taaaatgacaaaaa 39376172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 5117006 - 5116946
Alignment:
Q  68 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactt 128  Q
    ||||||| ||||| || | ||||| ||||| ||||||||||||||||| || |||||||||    
T  5117006 tttgaaagttaaaggagtaacttgtgaattttgtcaaactaaaatgacttatttgaaactt 5116946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 116
Target Start/End: Complemental strand, 34429755 - 34429683
Alignment:
Q  45 aattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    ||||||||| ||||| ||||||  || |||| ||||| |||| ||||| ||||||||||||||||||| ||||    
T  34429755 aattaaaaggacctaattgaaattttcgaaatttaaaggactaacttgagaattctgtcaaactaaaaggacc 34429683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 3e-42; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 14 - 175
Target Start/End: Original strand, 10862545 - 10862708
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaa-tgactgacttgggaattctgtcaaactaaaa 111  Q
    |||| |||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||| ||||| ||||| ||| ||||||||| |||||||||||    
T  10862545 gacagcaggggtaacggtgaaatagtttatcaactaaaaggacctatttgaaacttttgaaatttaaaatgactaactggggaattctttcaaactaaaa 10862644  T
Q  112 tgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    |||| |||||||||||||| |||||||||  ||||| ||| || || |||||||||||||||||    
T  10862645 tgacttaattgaaactttcaaaacttaaaggactaacttgagaattctgtcaaactaaaaggac 10862708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 32417684 - 32417829
Alignment:
Q  27 acggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaa 125  Q
    |||||||||||||||||||| |||||| ||||||||||||| | |||||||||||||||| |||| | |||| ||||||||| ||| |||||||||||||    
T  32417684 acggtgaaatagtttatcaactaaaaggacctatttgaaacttctgaaacttaaatgactaacttagaaattttgtcaaactgaaaggacctaattgaaa 32417783  T
Q  126 ctttcgaaacttaaaatactaaattgggagttatgtcaaactaaaa 171  Q
    ||||||||| |||||  ||||| |||||| || ||| |||||||||    
T  32417784 ctttcgaaagttaaagaactaacttgggaattctgtaaaactaaaa 32417829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 32423525 - 32423670
Alignment:
Q  27 acggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaa 125  Q
    |||||||||||||||||||| |||||| ||||||||||||| | |||||||||||||||| |||| | |||| ||||||||| ||| |||||||||||||    
T  32423525 acggtgaaatagtttatcaactaaaaggacctatttgaaacttctgaaacttaaatgactaacttagaaattttgtcaaactgaaaggacctaattgaaa 32423624  T
Q  126 ctttcgaaacttaaaatactaaattgggagttatgtcaaactaaaa 171  Q
    ||||||||| |||||  ||||| |||||| || ||| |||||||||    
T  32423625 ctttcgaaagttaaagaactaacttgggaattctgtaaaactaaaa 32423670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 11527693 - 11527535
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| |||||||||||||||||||||||||||| ||||| ||||||||||||||         ||||| |||| ||||| ||||| |||||||||||||     
T  11527693 gacagcaggggtaacggtgaaatagtttatcaactaaaatgacctatttgaaac---------ttaaaggactaacttgtgaattttgtcaaactaaaag 11527603  T
Q  113 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    ||||||||||||||||||||||||||||  ||||| || ||| |||||||||| ||||||||| ||||    
T  11527602 gacctaattgaaactttcgaaacttaaaggactaacttaggaattatgtcaaagtaaaaggaccaaaa 11527535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 49 - 171
Target Start/End: Original strand, 16168685 - 16168807
Alignment:
Q  49 aaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaa 148  Q
    |||||||||||||||||| |||||||| |||  |||| ||||| ||||||||||||||||||| |||||||||||||||| |||||||||||  |||||     
T  16168685 aaaagacctatttgaaacttttgaaacgtaatagactaacttgagaattctgtcaaactaaaaggacctaattgaaacttgcgaaacttaaatgactaat 16168784  T
Q  149 ttgggagttatgtcaaactaaaa 171  Q
    |||| | || |||||||||||||    
T  16168785 ttggaaattctgtcaaactaaaa 16168807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 17180102 - 17180224
Alignment:
Q  19 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 117  Q
    |||||||||||||||||||||||||||| ||||| || ||||||||||| ||| ||||||||| |||| |||||  |||| ||||||||||||| ||| |    
T  17180102 caggggtaacggtgaaatagtttatcaactaaaatgatctatttgaaacttttaaaacttaaaggactaacttgaaaattatgtcaaactaaaaggacat 17180201  T
Q  118 aattgaaactttcgaaacttaaa 140  Q
    |||| ||||||||||||||||||    
T  17180202 aattaaaactttcgaaacttaaa 17180224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 33 - 175
Target Start/End: Complemental strand, 20575559 - 20575416
Alignment:
Q  33 aaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcg 131  Q
    |||||||||||||| | ||| |||||||||||||| ||| ||||||||| |||| |||||| |||||| ||||||||||| |||||| || |||||||||    
T  20575559 aaatagtttatcaactgaaatgacctatttgaaacttttaaaacttaaaggactaacttggaaattctatcaaactaaaaggacctatttaaaactttcg 20575460  T
Q  132 aaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    |||||||||  ||||| |||| | || | |||||||||||||||    
T  20575459 aaacttaaaggactaacttggaaattctatcaaactaaaaggac 20575416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 67 - 180
Target Start/End: Complemental strand, 16168577 - 16168464
Alignment:
Q  67 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 166  Q
    |||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||  |||||  || || || | ||||||    
T  16168577 atttgaaacttaaaggactaacttggaaattctgtcaaactaaaatgacctaattgaaactttcaaaacttaaaggactaacgtgagaattctatcaaac 16168478  T
Q  167 taaaaggactaaaa 180  Q
    ||||||||| ||||    
T  16168477 taaaaggaccaaaa 16168464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 57 - 180
Target Start/End: Complemental strand, 32417591 - 32417468
Alignment:
Q  57 tatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagt 156  Q
    ||||| |||| |||||||||||||||||| |||||  |||| ||||||||||||||||| ||||| ||||||||||||||||||  ||||| |||  | |    
T  32417591 tatttaaaacttttgaaacttaaatgactaacttgaaaattttgtcaaactaaaatgacataattaaaactttcgaaacttaaaggactaacttgaaaat 32417492  T
Q  157 tatgtcaaactaaaaggactaaaa 180  Q
    | ||||||||||||||||| ||||    
T  32417491 tctgtcaaactaaaaggaccaaaa 32417468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 57 - 180
Target Start/End: Complemental strand, 32423432 - 32423309
Alignment:
Q  57 tatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagt 156  Q
    ||||| |||| |||||||||||||||||| |||||  |||| ||||||||||||||||| ||||| ||||||||||||||||||  ||||| |||  | |    
T  32423432 tatttaaaacttttgaaacttaaatgactaacttgaaaattttgtcaaactaaaatgacataattaaaactttcgaaacttaaaggactaacttgaaaat 32423333  T
Q  157 tatgtcaaactaaaaggactaaaa 180  Q
    | ||||||||||||||||| ||||    
T  32423332 tctgtcaaactaaaaggaccaaaa 32423309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 174
Target Start/End: Original strand, 24139466 - 24139626
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| ||||||| || |||||||| |||||||| ||||| ||| |||||||||  ||||||||||||| |||| || ||  |||||| |||||||||||     
T  24139466 gacaacaggggttacagtgaaataatttatcaactaaaaagacttatttgaaatttttgaaacttaaaggactaacctgataattctatcaaactaaaag 24139565  T
Q  113 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 174  Q
    ||| ||||| ||||||||||||||||||  ||||| ||| || ||||||| |||||||||||    
T  24139566 gacttaattaaaactttcgaaacttaaaggactaatttgtgaattatgtc-aactaaaagga 24139626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 67 - 193
Target Start/End: Original strand, 9902277 - 9902404
Alignment:
Q  67 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 166  Q
    ||||||||||||||  ||| ||| ||||||| ||||||||||||| ||| ||||| ||||||||||||||||||| ||||| |||  | || ||||||||    
T  9902277 atttgaaacttaaagaactaactcgggaattatgtcaaactaaaaggacataattaaaactttcgaaacttaaaagactaacttgaaaattctgtcaaac 9902376  T
Q  167 taaaagga-ctaaaatgatttttgacct 193  Q
    |||||| | | |||||||| ||||||||    
T  9902377 taaaagaaccaaaaatgatatttgacct 9902404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 16168644 - 16168751
Alignment:
Q  68 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 167  Q
    ||||||||||||| |||| |||||||| ||| |||||||||||| |||||| |||||||||| ||||| ||| | ||||| ||| || || |||||||||    
T  16168644 tttgaaacttaaaagactaacttgggatttcagtcaaactaaaaagacctatttgaaacttttgaaacgtaatagactaacttgagaattctgtcaaact 16168743  T
Q  168 aaaaggac 175  Q
    ||||||||    
T  16168744 aaaaggac 16168751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 171
Target Start/End: Complemental strand, 10962896 - 10962746
Alignment:
Q  22 gggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaat 120  Q
    |||||||||| |||||||||||||| ||||| ||| |||||||||| ||| ||||||||| |||| | || | |||||| | ||| ||||| || |||||    
T  10962896 gggtaacggtaaaatagtttatcaactaaaatgacatatttgaaacttttaaaacttaaaggactaatttagaaattctattaaaataaaaggatctaat 10962797  T
Q  121 tgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaa 171  Q
    ||||||||||||||||| | | | ||| || ||| || |||||||||||||    
T  10962796 tgaaactttcgaaactttacagaataactttggaattttgtcaaactaaaa 10962746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 128
Target Start/End: Original strand, 20575600 - 20575670
Alignment:
Q  58 atttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactt 128  Q
    ||||||||| ||||||||||||| |||| ||||||||||||||||||||||||| |||||| |||||||||    
T  20575600 atttgaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggacctatttgaaactt 20575670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 180
Target Start/End: Complemental strand, 2839737 - 2839624
Alignment:
Q  67 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 166  Q
    |||||||| ||||| |||| ||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||||  ||||| ||| || || | |||||     
T  2839737 atttgaaatttaaaggactaacttgagaattctgtcaaattaaaaggacctaattgaaacttttgaaacttaaacgactaacttgagaattctttcaaat 2839638  T
Q  167 taaaaggactaaaa 180  Q
    ||||||||| ||||    
T  2839637 taaaaggaccaaaa 2839624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 175
Target Start/End: Original strand, 2840064 - 2840172
Alignment:
Q  67 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 166  Q
    ||||||||||||||||| | ||||| ||||||||| ||||||||| || ||| | |||||||| ||||||||||  ||||| ||| || |||||| ||||    
T  2840064 atttgaaacttaaatgattaacttgagaattctgttaaactaaaaggatctattcgaaacttttgaaacttaaatgactaacttgagaattatgttaaac 2840163  T
Q  167 taaaaggac 175  Q
    |||||||||    
T  2840164 taaaaggac 2840172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 17179790 - 17179662
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| |||| |||||||||||||   ||||||| |||||| ||||||||||||  ||||||| ||||| |||| |||||  |||||| ||||||||||      
T  17179790 gacagcaggagtaacggtgaaatgacttatcaactaaaaggacctatttgaaatttttgaaatttaaaggactaacttgaaaattctatcaaactaaagg 17179691  T
Q  113 gacctaattgaaactttcgaaacttaaaa 141  Q
    ||||||||| ||| |||||||||||||||    
T  17179690 gacctaattaaaattttcgaaacttaaaa 17179662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 168
Target Start/End: Original strand, 9946672 - 9946818
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| |||||||||||||||||||||||||||| |||||| |||| |||||||          ||||| |||| | |||| |||| ||||||||||||||    
T  9946672 gacagcaggggtaacggtgaaatagtttatcaactaaaaggacctctttgaaat---------ttaaaggactaatttggaaattatgtcaaactaaaat 9946762  T
Q  113 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaacta 168  Q
    |||||||||||||||||||| | |||||  ||||| || | | |||||||||||||    
T  9946763 gacctaattgaaactttcgagatttaaaggactaacttagaaattatgtcaaacta 9946818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 28630584 - 28630742
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| ||||||||| |||||||||||||||||| |||||| ||||||||||| |         |||||  ||| |||| ||||||||  |||||||||      
T  28630584 gacaacaggggtaaaggtgaaatagtttatcaactaaaaggacctatttgaagc---------ttaaagtactaacttaggaattctaccaaactaaatg 28630674  T
Q  113 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    |  ||||||||||||||| |||||||||| ||||| || ||| |||||||||||||||||||| ||||    
T  28630675 ggtctaattgaaactttcaaaacttaaaaaactaacttaggaattatgtcaaactaaaaggaccaaaa 28630742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 9902060 - 9901962
Alignment:
Q  19 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    ||||||||||| |||||||||||||||| ||||| ||||||||| |||| ||||||||| |||  ||| |||||| ||||||| |||||||||| ||||    
T  9902060 caggggtaacgatgaaatagtttatcaactaaaatgacctatttaaaacttttgaaactaaaagcactaacttggaaattctggcaaactaaaaggacc 9901962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 20575660 - 20575763
Alignment:
Q  67 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 166  Q
    ||||||||||| || |||| ||||||||||| ||||||||||||| ||| || || ||||||||||||||||||| ||||| ||| || || ||||||||    
T  20575660 atttgaaacttgaa-gactaacttgggaattttgtcaaactaaaaggacttatttaaaactttcgaaacttaaaa-actaacttgagaattctgtcaaac 20575757  T
Q  167 taaaag 172  Q
    ||||||    
T  20575758 taaaag 20575763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 11528013 - 11528130
Alignment:
Q  24 gtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattg 122  Q
    ||||| ||||||||||||||||| ||||| ||| |||||||||| ||||||||||||| || | | |||||| || |||||||||||||  |  || |||    
T  11528013 gtaacagtgaaatagtttatcaactaaaatgacatatttgaaacttttgaaacttaaaggattaagttgggacttatgtcaaactaaaagaatatatttg 11528112  T
Q  123 aaactttcgaaacttaaa 140  Q
    |||||||  |||||||||    
T  11528113 aaactttttaaacttaaa 11528130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 171
Target Start/End: Complemental strand, 32417640 - 32417537
Alignment:
Q  68 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 167  Q
    ||||||||||||| |||| | |||| |||||||||||||||||| ||| || || ||||||| ||||||||||  ||||| |||  | || |||||||||    
T  32417640 tttgaaacttaaaggactaatttggaaattctgtcaaactaaaaggacatatttaaaacttttgaaacttaaatgactaacttgaaaattttgtcaaact 32417541  T
Q  168 aaaa 171  Q
    ||||    
T  32417540 aaaa 32417537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 171
Target Start/End: Complemental strand, 32423481 - 32423378
Alignment:
Q  68 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 167  Q
    ||||||||||||| |||| | |||| |||||||||||||||||| ||| || || ||||||| ||||||||||  ||||| |||  | || |||||||||    
T  32423481 tttgaaacttaaaggactaatttggaaattctgtcaaactaaaaggacatatttaaaacttttgaaacttaaatgactaacttgaaaattttgtcaaact 32423382  T
Q  168 aaaa 171  Q
    ||||    
T  32423381 aaaa 32423378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 10407410 - 10407317
Alignment:
Q  19 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 111  Q
    |||||||||| |||||||| |||||||| ||||| ||| |||||||||| |||||||||||||  | | || | |||||| |||||||||||||    
T  10407410 caggggtaacagtgaaataatttatcaactaaaatgacatatttgaaacttttgaaacttaaagcagtaacataggaattttgtcaaactaaaa 10407317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 11528034 - 11528102
Alignment:
Q  104 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaag 172  Q
    |||||||||||| || |||||||||| ||||||||||  | ||| |||||| |||||||||||||||||    
T  11528034 aactaaaatgacatatttgaaacttttgaaacttaaaggattaagttgggacttatgtcaaactaaaag 11528102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 199
Target Start/End: Complemental strand, 9902034 - 9901939
Alignment:
Q  104 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaatgatttttgacctaaaata 199  Q
    ||||||||||||||| || ||||||| |||||| |||  ||||| |||| | || || |||||||||||||| ||||| || |||| |||||||||    
T  9902034 aactaaaatgacctatttaaaacttttgaaactaaaagcactaacttggaaattctggcaaactaaaaggaccaaaattatatttggcctaaaata 9901939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 10407709 - 10407799
Alignment:
Q  23 ggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacattt-gaaacttaaatgactgacttgggaattctgtcaaactaaaa 111  Q
    |||||| ||||||||||||||||| ||||| ||| |||||||||| |||  |||||| ||||||| ||||| |||||| || |||||||||    
T  10407709 ggtaacagtgaaatagtttatcaactaaaatgacatatttgaaacttttaaaaacttgaatgactaacttgagaattccgttaaactaaaa 10407799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 104 - 181
Target Start/End: Complemental strand, 10407384 - 10407307
Alignment:
Q  104 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaat 181  Q
    |||||||||||| || |||||||||| ||||||||||  | |||  | ||| || |||||||||||||||||||||||    
T  10407384 aactaaaatgacatatttgaaacttttgaaacttaaagcagtaacataggaattttgtcaaactaaaaggactaaaat 10407307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 116
Target Start/End: Complemental strand, 2839700 - 2839628
Alignment:
Q  45 aattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    ||||||||| ||||| ||||||| ||||||||||||| |||| ||||| ||||||| ||||| ||||| ||||    
T  2839700 aattaaaaggacctaattgaaacttttgaaacttaaacgactaacttgagaattctttcaaattaaaaggacc 2839628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 2840113 - 2840173
Alignment:
Q  56 ctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    ||||| ||||| |||||||||||||||||| ||||| ||||| ||| ||||||||| ||||    
T  2840113 ctattcgaaacttttgaaacttaaatgactaacttgagaattatgttaaactaaaaggacc 2840173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 17132178 - 17132265
Alignment:
Q  19 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaa 105  Q
    |||| |||||||| ||||||||||| || ||| | ||| |||||||| | ||||||||||||| || | ||||| |||||||||||||    
T  17132178 caggagtaacggtaaaatagtttataaactaatatgacttatttgaatcttttgaaacttaaaggattaacttgagaattctgtcaaa 17132265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 17180128 - 17180199
Alignment:
Q  104 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    ||||||||||| ||| ||||||||||  |||||||||  ||||| |||  | ||||||||||||||||||||    
T  17180128 aactaaaatgatctatttgaaacttttaaaacttaaaggactaacttgaaaattatgtcaaactaaaaggac 17180199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 20575478 - 20575415
Alignment:
Q  53 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    ||||||||| |||| || |||||||||| |||| |||||| |||||| ||||||||||| ||||    
T  20575478 gacctatttaaaactttcgaaacttaaaggactaacttggaaattctatcaaactaaaaggacc 20575415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 20575602 - 20575657
Alignment:
Q  120 ttgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    |||||||||| ||||||||||  ||||| |||||| || |||||||||||||||||    
T  20575602 ttgaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggac 20575657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 10862665 - 10862709
Alignment:
Q  72 aaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    ||||||||| |||| ||||| ||||||||||||||||||| ||||    
T  10862665 aaacttaaaggactaacttgagaattctgtcaaactaaaaggacc 10862709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 3e-42; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 22 - 180
Target Start/End: Original strand, 48352708 - 48352867
Alignment:
Q  22 gggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaat 120  Q
    ||||||| ||||||||||||||||| ||||| ||||||||| |||| ||||||||||||| |||| ||||||||||| ||||||||||||  ||||||||    
T  48352708 gggtaacagtgaaatagtttatcaactaaaatgacctatttaaaacttttgaaacttaaaggactaacttgggaattatgtcaaactaaatagacctaat 48352807  T
Q  121 tgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    |||| |||||||||||||||| ||||| | |||| || ||||||||||||||||| ||||    
T  48352808 tgaatctttcgaaacttaaaagactaactcgggaattctgtcaaactaaaaggaccaaaa 48352867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 14 - 171
Target Start/End: Complemental strand, 27351217 - 27351059
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| |||||||||||||||||||||||||||| ||||| ||| ||||||| || ||||||||||||| |||| ||||| ||||| |||||||||||||     
T  27351217 gacagcaggggtaacggtgaaatagtttatcaactaaaatgacttatttgatacttttgaaacttaaaggactaacttgagaattatgtcaaactaaaag 27351118  T
Q  113 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaa 171  Q
    ||| ||||||||||||||||||||||||  ||||| ||| || || ||||||| |||||    
T  27351117 gacttaattgaaactttcgaaacttaaaggactaacttgcgaattctgtcaaagtaaaa 27351059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 57 - 194
Target Start/End: Original strand, 29419051 - 29419189
Alignment:
Q  57 tatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagt 156  Q
    |||||||||| ||||||||||||| |||| | || |||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||| |||| | |    
T  29419051 tatttgaaacttttgaaacttaaaagactaattttggaattctgtcaaactaaaaggacctaattgaaactttcgaaacttgaaagactaacttggaaat 29419150  T
Q  157 tatgtcaaactaaaaggactaaaa-tgatttttgaccta 194  Q
    ||||||||||||||||||| |||| |||| |||||||||    
T  29419151 tatgtcaaactaaaaggaccaaaagtgatatttgaccta 29419189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 22 - 180
Target Start/End: Original strand, 10686680 - 10686839
Alignment:
Q  22 gggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaat 120  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||| ||| |||||||||||||| ||||| |||||||||  || ||||| |||||||     
T  10686680 gggtaacggtgaaatagtttatcaactaaaatgacctatttgaaacttttaaaacttaaatgactaacttgagaattctgttgaagtaaaaggacctaac 10686779  T
Q  121 tgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    | ||||||||||||||||||  ||||| |||  | || ||||||||||||||||| ||||    
T  10686780 ttaaactttcgaaacttaaaggactaacttgaaaattctgtcaaactaaaaggaccaaaa 10686839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 137
Target Start/End: Complemental strand, 8902927 - 8902803
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| |||||||||| |||||||| |||||||| |||||| || ||||| |||| ||||||||||||| |||| ||||||||||| ||||||||||||||    
T  8902927 gacaacaggggtaacagtgaaataatttatcaactaaaaggacttatttaaaacttttgaaacttaaaggactaacttgggaattttgtcaaactaaaat 8902828  T
Q  113 gacctaattgaaactttcgaaactt 137  Q
    ||| |||||||||||||||||||||    
T  8902827 gacttaattgaaactttcgaaactt 8902803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 14 - 174
Target Start/End: Complemental strand, 34254665 - 34254504
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| |||||||||| ||||||||||||||| | |||||| |  |||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||     
T  34254665 gacaacaggggtaacagtgaaatagtttatcgactaaaagcatatatttgaaacttttgaaacttaaaggactgacttaggaattctgtcaaactaaaag 34254566  T
Q  113 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 174  Q
    || ||| || ||||||| ||| ||||||  || || ||| || || ||||||||||||||||    
T  34254565 gatctatttaaaacttttgaaccttaaaggaccaacttgagaattctgtcaaactaaaagga 34254504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 53 - 174
Target Start/End: Original strand, 44964072 - 44964192
Alignment:
Q  53 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgg 152  Q
    |||||||||||||| ||| ||||||||| || | ||||| |||||||||||||||||||||| |||||||||||||||||||||| ||| ||||| |||     
T  44964072 gacctatttgaaacttttaaaacttaaaggaataacttgagaattctgtcaaactaaaatgatctaattgaaactttcgaaactt-aaagactaacttga 44964170  T
Q  153 gagttatgtcaaactaaaagga 174  Q
    || || |||| |||||||||||    
T  44964171 gaattttgtctaactaaaagga 44964192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 1765846 - 1765693
Alignment:
Q  27 acggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaa 125  Q
    |||||||||||||||||||| |||||| | |||||| |||| ||||||||||||| |||| | || | |||| ||||||||||| ||||||| ||| |||    
T  1765846 acggtgaaatagtttatcaactaaaaggatctatttaaaacttttgaaacttaaaggactaatttagaaattatgtcaaactaacatgacctgattaaaa 1765747  T
Q  126 ctttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
     ||||||||||||||| ||||| || ||| ||   ||||||||||||||||||||    
T  1765746 ttttcgaaacttaaaa-actaacttaggaattcgttcaaactaaaaggactaaaa 1765693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 20 - 175
Target Start/End: Complemental strand, 10685999 - 10685852
Alignment:
Q  20 aggggtaacggtgaaatagtttatcaattaaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaa 119  Q
    |||||||||||| |||||||||||||| |||||        ||| | |||||||||||||| |||| |||||| |||||||||||||||||| ||| |||    
T  10685999 aggggtaacggtaaaatagtttatcaactaaaa--------tgacatatttgaaacttaaaggactaacttggaaattctgtcaaactaaaaagacgtaa 10685908  T
Q  120 ttgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    ||||||| |||||||||||||  ||||| |||  | || |||||||||||||||||    
T  10685907 ttgaaacgttcgaaacttaaaggactaacttgaaaattctgtcaaactaaaaggac 10685852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 74 - 180
Target Start/End: Complemental strand, 11897947 - 11897841
Alignment:
Q  74 acttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagg 173  Q
    ||||||| || | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||| ||| || || ||||||||||||| |    
T  11897947 acttaaaggattaacttgggaattctgtcaaactaaaaggacctaattgaaactttcgaaacttaaatgactaacttgagaattctgtcaaactaaaatg 11897848  T
Q  174 actaaaa 180  Q
    || ||||    
T  11897847 accaaaa 11897841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 57 - 198
Target Start/End: Original strand, 17898850 - 17898992
Alignment:
Q  57 tatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagt 156  Q
    |||||||||| ||||||||||||| |||| | ||| ||||||| ||||||||||| ||||||||||||| |||  |||||||||  ||||| ||| || |    
T  17898850 tatttgaaacttttgaaacttaaaggactaatttgtgaattctatcaaactaaaaggacctaattgaaatttttaaaacttaaagaactaatttgagaat 17898949  T
Q  157 tatgtcaaactaaaaggactaaaa-tgatttttgacctaaaat 198  Q
     |||||||||||||||||| |||| || | |||||||||||||    
T  17898950 catgtcaaactaaaaggaccaaaagtggtatttgacctaaaat 17898992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 140
Target Start/End: Complemental strand, 44963992 - 44963878
Alignment:
Q  27 acggtgaaatagtttatcaatt-aaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaa 125  Q
    |||||||||||||||||||| | ||||||  ||||| |||| ||||||||||||| |||| | |||||||| || ||||||||||| ||| | |||||||    
T  44963992 acggtgaaatagtttatcaactgaaaagatatatttaaaacttttgaaacttaaaggactaatttgggaatcctatcaaactaaaaggactttattgaaa 44963893  T
Q  126 ctttcgaaacttaaa 140  Q
    |||||||||||||||    
T  44963892 ctttcgaaacttaaa 44963878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 174
Target Start/End: Complemental strand, 49650686 - 49650578
Alignment:
Q  67 atttgaaacttaaatg-actgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaa 165  Q
    |||||||||||||| | ||| ||||| ||||||||||||||||||| ||||||||||||| |||| ||| |||||  ||||| ||| || ||||||||||    
T  49650686 atttgaaacttaaaaggactaacttgagaattctgtcaaactaaaaggacctaattgaaattttcaaaatttaaaggactaacttgagaattatgtcaaa 49650587  T
Q  166 ctaaaagga 174  Q
    |||||||||    
T  49650586 ctaaaagga 49650578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 57 - 171
Target Start/End: Original strand, 1765930 - 1766044
Alignment:
Q  57 tatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagt 156  Q
    |||||||||| |||||| |||||| |||| || || || |||||||||||||||||||| ||||| ||||||| |||| |||||| ||||| ||| || |    
T  1765930 tatttgaaacttttgaagcttaaaggactaacatgagatttctgtcaaactaaaatgacataatttaaacttttgaaatttaaaagactaacttgagaat 1766029  T
Q  157 tatgtcaaactaaaa 171  Q
    | ||||||| |||||    
T  1766030 tctgtcaaattaaaa 1766044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 61 - 175
Target Start/End: Original strand, 17898794 - 17898908
Alignment:
Q  61 tgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatg 160  Q
    |||||| ||||||| ||||| |||| | |||  |||||||||||||||||||||| || |||||||||| ||||||||||  ||||| ||| || || |     
T  17898794 tgaaacttttgaaatttaaaggactaatttgataattctgtcaaactaaaatgacttatttgaaacttttgaaacttaaaggactaatttgtgaattcta 17898893  T
Q  161 tcaaactaaaaggac 175  Q
    |||||||||||||||    
T  17898894 tcaaactaaaaggac 17898908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 49651013 - 49651083
Alignment:
Q  67 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaactt 137  Q
    |||||||||||||| |||| ||||| |||||||||||||||||||||| ||| || |||||||||||||||    
T  49651013 atttgaaacttaaaggactaacttgagaattctgtcaaactaaaatgatctatttaaaactttcgaaactt 49651083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 4772612 - 4772723
Alignment:
Q  22 gggtaacggtgaaatagtttatcaattaaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaatt 121  Q
    |||||||| |||||||||||||||| |||||||   ||||     |||||||||||||| |||| |||||| |||||||||||||||||| |||| ||||    
T  4772612 gggtaacgatgaaatagtttatcaactaaaaga---attt-----atttgaaacttaaaggactaacttggaaattctgtcaaactaaaaggacccaatt 4772703  T
Q  122 gaaactttcgaaacttaaaa 141  Q
     ||| |||| ||||||||||    
T  4772704 aaaaatttcaaaacttaaaa 4772723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 180
Target Start/End: Original strand, 27351547 - 27351660
Alignment:
Q  67 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 166  Q
    |||||||||||||| |||| | ||| ||||||| ||||| ||||| ||| ||||| |||||||||||||||||| ||  || ||| || ||||||||||     
T  27351547 atttgaaacttaaaggactaatttgagaattctatcaaaataaaacgacataattaaaactttcgaaacttaaagtatcaacttgagaattatgtcaaat 27351646  T
Q  167 taaaaggactaaaa 180  Q
    ||||||||| ||||    
T  27351647 taaaaggaccaaaa 27351660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 171
Target Start/End: Original strand, 44964018 - 44964130
Alignment:
Q  59 tttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagtta 158  Q
    |||||||| ||| ||| ||||| |||| ||||| ||||||||||||||||||| |||||| ||||||||||  |||||||||  | ||| ||| || ||     
T  44964018 tttgaaacttttaaaatttaaaggactaacttgagaattctgtcaaactaaaaggacctatttgaaacttttaaaacttaaaggaataacttgagaattc 44964117  T
Q  159 tgtcaaactaaaa 171  Q
    |||||||||||||    
T  44964118 tgtcaaactaaaa 44964130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 171
Target Start/End: Original strand, 1765881 - 1765984
Alignment:
Q  68 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 167  Q
    ||||||||||||| || | |||||| |||||||||||||||||||||| || |||||||||| ||| ||||||  |||||  || || || |||||||||    
T  1765881 tttgaaacttaaaggagtaacttggaaattctgtcaaactaaaatgacttatttgaaacttttgaagcttaaaggactaacatgagatttctgtcaaact 1765980  T
Q  168 aaaa 171  Q
    ||||    
T  1765981 aaaa 1765984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 11897908 - 11897845
Alignment:
Q  53 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    |||||| ||||||| || ||||||||||||||| ||||| ||||||||||||||||||||||||    
T  11897908 gacctaattgaaactttcgaaacttaaatgactaacttgagaattctgtcaaactaaaatgacc 11897845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 111
Target Start/End: Complemental strand, 39302427 - 39302339
Alignment:
Q  24 gtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 111  Q
    ||||||||||||||||||||||| |||||| ||||| | ||||| |||||||||||||  | | | ||| |||||||||||||||||||    
T  39302427 gtaacggtgaaatagtttatcaactaaaagaacctaatcgaaacttttgaaacttaaagaattaatttgtgaattctgtcaaactaaaa 39302339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 48352366 - 48352272
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaat----gactgacttgggaattctgtcaa 104  Q
    |||| |||||||| ||||||||||||||||||| |||||| ||||||||||||| ||| |||| |||||    |||| ||||||||||||||||||    
T  48352366 gacagcaggggtagcggtgaaatagtttatcaactaaaagaacctatttgaaac-ttttaaacctaaatgacggactaacttgggaattctgtcaa 48352272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 93 - 140
Target Start/End: Complemental strand, 4030390 - 4030342
Alignment:
Q  93 gaattctgtcaaactaaaatg-acctaattgaaactttcgaaacttaaa 140  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||    
T  4030390 gaattctgtcaaactaaaaaggacctaattgaaactttcgaaacttaaa 4030342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 27351186 - 27351114
Alignment:
Q  104 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggact 176  Q
    |||||||||||| || |||| ||||| ||||||||||  ||||| ||| || |||||||||||||||||||||    
T  27351186 aactaaaatgacttatttgatacttttgaaacttaaaggactaacttgagaattatgtcaaactaaaaggact 27351114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 116
Target Start/End: Original strand, 8903237 - 8903340
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| |||||||||| |||||||| |||| ||| ||||| ||  |||||||||| || |||||||||| || | ||||| ||||| |||||||||||||     
T  8903237 gacaacaggggtaacagtgaaataatttagcaactaaaatgatatatttgaaactttcgaaacttaaaggattaacttgagaattatgtcaaactaaaaa 8903336  T
Q  113 gacc 116  Q
    ||||    
T  8903337 gacc 8903340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 34254998 - 34255070
Alignment:
Q  54 acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaact 127  Q
    ||||||||||||| |||||||||||||   || |||||| |||||||||||||||||   ||||||||||||||    
T  34254998 acctatttgaaacttttgaaacttaaaat-ctaacttggaaattctgtcaaactaaatatacctaattgaaact 34255070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 2965583 - 2965499
Alignment:
Q  28 cggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 111  Q
    ||||||||||||||||||| ||||| ||| ||||| |||| ||||||||||||| |  | |||||  ||||| ||||||||||||    
T  2965583 cggtgaaatagtttatcaactaaaatgacatatttaaaacttttgaaacttaaaggtataacttgaaaattcggtcaaactaaaa 2965499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 180
Target Start/End: Original strand, 8903268 - 8903344
Alignment:
Q  104 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    |||||||||||  || |||||||||||||||||||||  | ||| ||| || |||||||||||||||| ||| ||||    
T  8903268 aactaaaatgatatatttgaaactttcgaaacttaaaggattaacttgagaattatgtcaaactaaaaagaccaaaa 8903344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 10685918 - 10685851
Alignment:
Q  49 aaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    ||||||| || ||||||| || |||||||||| |||| |||||  |||||||||||||||||| ||||    
T  10685918 aaaagacgtaattgaaacgttcgaaacttaaaggactaacttgaaaattctgtcaaactaaaaggacc 10685851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 4772223 - 4772171
Alignment:
Q  67 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaa 119  Q
    |||||||||||||| ||||  |||| ||||| ||||||||||||| |||||||    
T  4772223 atttgaaacttaaaggactaccttgtgaattttgtcaaactaaaaggacctaa 4772171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 8902896 - 8902824
Alignment:
Q  104 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggact 176  Q
    |||||||| ||| || || ||||||| ||||||||||  ||||| |||||| || ||||||||||||| ||||    
T  8902896 aactaaaaggacttatttaaaacttttgaaacttaaaggactaacttgggaattttgtcaaactaaaatgact 8902824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 27351110 - 27351054
Alignment:
Q  60 ttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    ||||||| || |||||||||| |||| ||||| ||||||||||||| ||||| ||||    
T  27351110 ttgaaactttcgaaacttaaaggactaacttgcgaattctgtcaaagtaaaaagacc 27351054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 39302753 - 39302809
Alignment:
Q  60 ttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    ||||||| ||| ||| ||||| |||| ||||| ||||||||||||||||||| ||||    
T  39302753 ttgaaacttttaaaatttaaaggactaacttgagaattctgtcaaactaaaaggacc 39302809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 1e-41; HSPs: 80)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 14 - 174
Target Start/End: Complemental strand, 35214973 - 35214811
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| |||||||||||||||||||||||||||| ||||| |||||||||||||  ||||||||||||| |||| ||||| |||||||||||||||||||     
T  35214973 gacaacaggggtaacggtgaaatagtttatcaactaaaaagacctatttgaaatttttgaaacttaaaagactaacttgagaattctgtcaaactaaaag 35214874  T
Q  113 gacctaattgaaactttcgaaacttaaaa-tactaaattgggagttatgtcaaactaaaagga 174  Q
    ||||||||||||||||| |||||||||||  ||||| || | | || ||||||||||||||||    
T  35214873 gacctaattgaaacttttgaaacttaaaagaactaacttagaaattctgtcaaactaaaagga 35214811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 1441400 - 1441571
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| |||||||||| ||||||||||||||||| |||||| ||||||||         |||||||||| |||| ||||||||||||| ||||||||||||    
T  1441400 gacagcaggggtaacagtgaaatagtttatcaactaaaaggacctattt---------gaaacttaaaagactaacttgggaattctatcaaactaaaat 1441490  T
Q  113 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa-tgatttttgacc 192  Q
    ||||||||||||||||||||||| ||||  ||||| |||||| |||||||||||||||||||| |||| |||| |||||||    
T  1441491 gacctaattgaaactttcgaaacctaaaggactaacttgggaattatgtcaaactaaaaggaccaaaagtgatatttgacc 1441571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 29 - 172
Target Start/End: Original strand, 19925311 - 19925455
Alignment:
Q  29 ggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaact 127  Q
    |||||||||||||||||| | |||| ||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||| || |||||| |||||    
T  19925311 ggtgaaatagtttatcaactgaaaggacctatttgaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggatctaattaaaact 19925410  T
Q  128 ttcgaaacttaaaatactaaattgggagttatgtcaaactaaaag 172  Q
    |||| ||||||||  ||||| |||||| || ||||||||||||||    
T  19925411 ttcgcaacttaaaggactaagttgggaattttgtcaaactaaaag 19925455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 5559270 - 5559111
Alignment:
Q  19 caggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatg-actgacttgggaattctgtcaaactaaaatgacc 116  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||| | ||| ||||||||||| | ||||||||||| || |    
T  5559270 caggggtaacggtgaaatagtttatcaactaaaaggacctatttgaaacttttgaaacttaaaaggactaacttgggaattttatcaaactaaaaggatc 5559171  T
Q  117 taattgaaactttcgaaacttaaaa-tactaaattgggagttatgtcaaactaaaaggac 175  Q
    || |||||||||| |||||||||||  ||||| |||||| || ||||||| |||||||||    
T  5559170 tatttgaaacttttgaaacttaaaaggactaacttgggaattctgtcaaattaaaaggac 5559111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 67 - 172
Target Start/End: Complemental strand, 31893362 - 31893257
Alignment:
Q  67 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 166  Q
    |||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| || || ||||||||    
T  31893362 atttgaaacttaaaagactaacttaggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaaaactaacttgagaattctgtcaaac 31893263  T
Q  167 taaaag 172  Q
    ||||||    
T  31893262 taaaag 31893257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 175
Target Start/End: Complemental strand, 5805186 - 5805042
Alignment:
Q  32 gaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttc 130  Q
    ||||||||||||||| |||||| ||||| || |||| ||||||||||||| || |  |||| ||||||||||||||||||| ||||||||||||||||||    
T  5805186 gaaatagtttatcaactaaaaggacctagttaaaacttttgaaacttaaaggaatagcttgagaattctgtcaaactaaaaggacctaattgaaactttc 5805087  T
Q  131 gaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    ||||||||||  ||||| ||| || || |||||||||||||||||    
T  5805086 gaaacttaaaggactaacttgagaattctgtcaaactaaaaggac 5805042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 33879514 - 33879641
Alignment:
Q  53 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgg 152  Q
    |||||||||||||| ||||||||||||| || | |||||| |||||||||||| ||||| ||||||||||||||||||||||||||||  ||||| |||     
T  33879514 gacctatttgaaacttttgaaacttaaaggattaacttggaaattctgtcaaattaaaaggacctaattgaaactttcgaaacttaaaggactaacttgt 33879613  T
Q  153 gagttatgtcaaactaaaaggactaaaa 180  Q
    || || ||||||||||||||||| ||||    
T  33879614 gaattctgtcaaactaaaaggaccaaaa 33879641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 57 - 174
Target Start/End: Complemental strand, 21433266 - 21433149
Alignment:
Q  57 tatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagt 156  Q
    |||||||||| |||||||||||||||||| ||||||||||||| ||||||||||| ||| |||||||||| |||||||||||||  ||||| ||| || |    
T  21433266 tatttgaaacttttgaaacttaaatgactaacttgggaattctttcaaactaaaaggacttaattgaaacattcgaaacttaaaggactaacttgtgaat 21433167  T
Q  157 tatgtcaaactaaaagga 174  Q
    | ||||||||||||||||    
T  21433166 tttgtcaaactaaaagga 21433149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 1286534 - 1286369
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaaga-cctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| |||||||||||||||  || |||||||| ||||||| |||||||||||| ||||||||||||| |||| ||||  ||||||| |||||||||||     
T  1286534 gacagcaggggtaacggtga--taatttatcaactaaaagaacctatttgaaacttttgaaacttaaaagactaactttagaattctctcaaactaaaag 1286437  T
Q  113 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    ||||||||||||||||| |||| |||||| ||||| |||  | || | ||||||||||||||| ||||    
T  1286436 gacctaattgaaacttttgaaatttaaaaaactaatttgaaaattctatcaaactaaaaggacgaaaa 1286369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 29 - 175
Target Start/End: Complemental strand, 23150790 - 23150643
Alignment:
Q  29 ggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaact 127  Q
    |||||||||||||||||| ||||| ||  |||||||||| ||||||||||||| |||| |  || ||||||||||||| ||||||||| |||||||||||    
T  23150790 ggtgaaatagtttatcaactaaaatgatttatttgaaacttttgaaacttaaaagactaatctgagaattctgtcaaattaaaatgacttaattgaaact 23150691  T
Q  128 ttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    ||| ||| |||||  ||||| ||| || ||||||||||||||||||||    
T  23150690 ttcaaaatttaaaggactaacttgagaattatgtcaaactaaaaggac 23150643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 14 - 175
Target Start/End: Complemental strand, 27995227 - 27995065
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| |||||||||| ||||||||||||||||| |||||  || ||||||| || ||||||||||||| || | ||||| ||||||||||||| ||||||    
T  27995227 gacagcaggggtaacagtgaaatagtttatcaactaaaattacttatttgatacttttgaaacttaaaggattaacttgagaattctgtcaaattaaaat 27995128  T
Q  113 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    || ||| || ||| ||| ||||||||||| ||||| ||| || || |||||||||||||||||    
T  27995127 gatctatttcaaatttttgaaacttaaaacactaacttgagaattctgtcaaactaaaaggac 27995065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 21 - 174
Target Start/End: Complemental strand, 28256652 - 28256498
Alignment:
Q  21 ggggtaacggtgaaatagtttatcaattaaaaga-cctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaa 119  Q
    |||||||| ||||||||||||||||| ||||||| |||||||||||| ||||||| ||||| |||| ||||| ||||||||||||||||||| || ||      
T  28256652 ggggtaacagtgaaatagtttatcaactaaaagaacctatttgaaacttttgaaatttaaaggactaacttgagaattctgtcaaactaaaaggatctct 28256553  T
Q  120 ttgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 174  Q
    || ||||||| |||| |||||  | ||| |||||| || ||||||||||||||||    
T  28256552 ttaaaacttttgaaatttaaagaagtaacttgggaattctgtcaaactaaaagga 28256498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 14 - 171
Target Start/End: Complemental strand, 33235200 - 33235042
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| ||||||||||| |||||||||||||||| ||||| ||||| |||||||| ||||||| ||||| | || |||||||||||||||||||| ||||     
T  33235200 gacaacaggggtaacgatgaaatagtttatcaactaaaatgacctctttgaaacttttgaaatttaaaggtctaacttgggaattctgtcaaaccaaaag 33235101  T
Q  113 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaa 171  Q
    |||||||||||||||||  ||| |||||  | ||| ||| || || |||||||||||||    
T  33235100 gacctaattgaaacttttaaaatttaaaggattaacttgagaattctgtcaaactaaaa 33235042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 14 - 175
Target Start/End: Original strand, 39959152 - 39959314
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaaga-cctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||||||| | |||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||| | |||||| ||||||||||||||||||     
T  39959152 gacatcagcgttaacggtgaaatagtttatcaagtaaaagaacctatttgaaacttttgaaacttaaatgattaacttggaaattctgtcaaactaaaag 39959251  T
Q  113 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
     | ||| ||||||||||  ||| |||||  ||||| ||   | || |||||||||||||||||    
T  39959252 aatctatttgaaacttttcaaatttaaatgactaatttaaaaattctgtcaaactaaaaggac 39959314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 21 - 172
Target Start/End: Original strand, 1349114 - 1349269
Alignment:
Q  21 ggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgac---ttgggaattctgtcaaactaaaatgacc 116  Q
    |||||||||||||||| ||||||||| ||||| |||||||||||||| ||||||||||||| |||| |    |||| |||||||||||||||||||||      
T  1349114 ggggtaacggtgaaatggtttatcaactaaaatgacctatttgaaacttttgaaacttaaaggacttataagttggaaattctgtcaaactaaaatgatt 1349213  T
Q  117 taattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaag 172  Q
    || || ||||||| ||||||||||| ||||| || | | |||||||||||||||||    
T  1349214 tatttaaaacttttgaaacttaaaagactaacttagaaattatgtcaaactaaaag 1349269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 67 - 180
Target Start/End: Original strand, 5559630 - 5559742
Alignment:
Q  67 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 166  Q
    |||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||  |||||||||  ||||| |||||| || ||||||||    
T  5559630 atttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggacctaattgaaacttt-aaaacttaaaggactaacttgggaattttgtcaaac 5559728  T
Q  167 taaaaggactaaaa 180  Q
    ||||||||| ||||    
T  5559729 taaaaggaccaaaa 5559742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 180
Target Start/End: Complemental strand, 20366206 - 20366048
Alignment:
Q  21 ggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaa 119  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||  ||||||  |||  || ||||| | ||||||||||||||||||| ||| |||    
T  20366206 ggggtaacggtgaaatagtttatcaactaaaaagacctatttgaaactcttgaaatataagggattgact-gagaattctgtcaaactaaaaggacataa 20366108  T
Q  120 ttgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    |||||||||||||||||||||  ||||| ||| || || ||| ||||||||||||| ||||    
T  20366107 ttgaaactttcgaaacttaaaggactaacttgagaattctgt-aaactaaaaggaccaaaa 20366048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 30 - 140
Target Start/End: Complemental strand, 34951377 - 34951266
Alignment:
Q  30 gtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactt 128  Q
    ||||||||||||||||| ||||| ||| |||||||||| ||||||||||||| |||| ||||  ||||| |||||||| |||| ||||||||||||||||    
T  34951377 gtgaaatagtttatcaactaaaatgacttatttgaaacttttgaaacttaaaggactaacttaagaattatgtcaaacgaaaaggacctaattgaaactt 34951278  T
Q  129 tcgaaacttaaa 140  Q
    ||||||||||||    
T  34951277 tcgaaacttaaa 34951266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 10619961 - 10619851
Alignment:
Q  19 caggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 117  Q
    ||||| |||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||| |||| |||||  |||| |||||||||||||  ||||    
T  10619961 cagggataacggtgaaatagtttatcaactaaaaggacctatttgaaacttttgaaacttaaaggactaacttgacaattgtgtcaaactaaaagaacct 10619862  T
Q  118 aattgaaactt 128  Q
    |||||||||||    
T  10619861 aattgaaactt 10619851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 22876867 - 22876972
Alignment:
Q  68 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 167  Q
    ||||||||||||| || | ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| | ||| |||| | ||||||||||||    
T  22876867 tttgaaacttaaaggattaacttgagaattctgtcaaactaaaatgacttaattgaaactttcgaaacttaaaa-attaacttggaaattatgtcaaact 22876965  T
Q  168 aaaagga 174  Q
    |||||||    
T  22876966 aaaagga 22876972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 140
Target Start/End: Original strand, 31175924 - 31176042
Alignment:
Q  23 ggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaatt 121  Q
    ||||||| || ||||| ||||||| |||||| |||| |||||||| ||||||||||||| |||| |||||| |||||||||||||||||| |||||||||    
T  31175924 ggtaacgttggaatagattatcaactaaaaggacctctttgaaacttttgaaacttaaaggactaacttggaaattctgtcaaactaaaaggacctaatt 31176023  T
Q  122 gaaactttcgaaacttaaa 140  Q
    ||||||||| ||| |||||    
T  31176024 gaaactttcaaaaattaaa 31176042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 56 - 193
Target Start/End: Complemental strand, 40904814 - 40904677
Alignment:
Q  56 ctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggag 155  Q
    ||||||||||| ||| |||||||||||||| | |||  |||| ||||||||||||| |||||||||||||||||  |||||||||| ||||| ||| ||     
T  40904814 ctatttgaaacttttaaaacttaaatgactaatttgaaaattatgtcaaactaaaaggacctaattgaaacttttaaaacttaaaagactaacttgagaa 40904715  T
Q  156 ttatgtcaaactaaaaggactaaaatgatttttgacct 193  Q
    ||||||||||| |||||||| ||| || | ||||||||    
T  40904714 ttatgtcaaaccaaaaggaccaaagtggtatttgacct 40904677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 32 - 174
Target Start/End: Complemental strand, 1346624 - 1346485
Alignment:
Q  32 gaaatagtttatcaattaaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcg 131  Q
    ||||||||||||||| ||||||| ||   |||||| ||||||||||||| |||| |||||| |||| ||||||||||||| ||  |||||||||||||||    
T  1346624 gaaatagtttatcaactaaaagaact---tgaaacttttgaaacttaaaggactaacttggaaattatgtcaaactaaaaggatttaattgaaactttcg 1346528  T
Q  132 aaacttaaaatactaaattgggagttatgtcaaactaaaagga 174  Q
    |||||||||  ||||| ||  || || ||||||||||||||||    
T  1346527 aaacttaaagcactaacttaagaattctgtcaaactaaaagga 1346485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 67 - 193
Target Start/End: Original strand, 31893488 - 31893615
Alignment:
Q  67 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 166  Q
    |||||||||||||| |||| ||||| ||||||||||||||||||| |||||||||||||||||  |||||||||  ||||| || | | || ||||||||    
T  31893488 atttgaaacttaaaggactaacttgagaattctgtcaaactaaaaggacctaattgaaacttttaaaacttaaaggactaacttagaaattctgtcaaac 31893587  T
Q  167 taaaagga-ctaaaatgatttttgacct 193  Q
    |||||||| | |||||||| ||||||||    
T  31893588 taaaaggaccaaaaatgatatttgacct 31893615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 180
Target Start/End: Complemental strand, 8039807 - 8039662
Alignment:
Q  19 caggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 117  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||                 |||| ||||||||||| |||||    
T  8039807 caggggtaacggtgaaatagtttatcaactaaaaggacctatttgaaacttttgaaactta-----------------ttctttcaaactaaaaggacct 8039725  T
Q  118 aattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    |||||||||||||||||||||||  ||||| ||| || |||||||||||||||||||| ||||    
T  8039724 aattgaaactttcgaaacttaaagaactaacttgagaattatgtcaaactaaaaggacaaaaa 8039662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 21413081 - 21413234
Alignment:
Q  27 acggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaa 125  Q
    |||||||| |||||||| || |||||| ||||||||||||| |||||||||||||  ||| |||| | |||||||||||| ||||| | |||||||||||    
T  21413081 acggtgaagtagtttatgaactaaaaggacctatttgaaacttttgaaacttaaaa-actaacttagaaattctgtcaaattaaaagggcctaattgaaa 21413179  T
Q  126 ctttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
     |||||||||| |||  ||||| |||||| || |||| |||||||||||| ||||    
T  21413180 ttttcgaaactaaaataactaatttgggaattctgtcgaactaaaaggaccaaaa 21413234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 174
Target Start/End: Original strand, 35215290 - 35215443
Alignment:
Q  22 gggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaat 120  Q
    |||||||  |||||||||||||||| ||||| ||  |||||||||| ||| ||||||||| |||| | |||| |||||||||||| ||||||||| ||||    
T  35215290 gggtaacaatgaaatagtttatcaactaaaatgagttatttgaaacttttaaaacttaaaagactaatttggaaattctgtcaaattaaaatgacttaat 35215389  T
Q  121 tgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 174  Q
    ||||| |||||||| |||||  ||||| |||  | || ||||||||||||||||    
T  35215390 tgaaattttcgaaatttaaaggactaacttgaaaattttgtcaaactaaaagga 35215443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 56 - 180
Target Start/End: Complemental strand, 21412989 - 21412865
Alignment:
Q  56 ctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggag 155  Q
    |||||| |||| ||||||||||||| |||| |||||  |||||||||||||||||| || ||||||||||||||| |||||||||  | ||| ||  ||     
T  21412989 ctatttaaaacttttgaaacttaaaggactaacttgaaaattctgtcaaactaaaaggatctaattgaaactttcaaaacttaaaggattaacttaagaa 21412890  T
Q  156 ttatgtcaaactaaaaggactaaaa 180  Q
    || ||||||||||||||||||||||    
T  21412889 ttctgtcaaactaaaaggactaaaa 21412865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 23679497 - 23679603
Alignment:
Q  22 gggtaacggtgaaatagtttatcaattaaaagac-ctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaat 120  Q
    ||||||||||||||||||||||||| ||||| |  |||||| |||| ||||||||||||| |||| ||||| |||||||||||||||||||  |||||||    
T  23679497 gggtaacggtgaaatagtttatcaactaaaataatctattttaaacttttgaaacttaaa-gactaacttgagaattctgtcaaactaaaagaacctaat 23679595  T
Q  121 tgaaactt 128  Q
    ||||||||    
T  23679596 tgaaactt 23679603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 36566400 - 36566282
Alignment:
Q  57 tatttgaaacatttgaaacttaaatgactgacttgg-gaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggag 155  Q
    |||||||||  ||||||||||||| |||| |||| | |||||||||||||||||||||||||||||||||||||| |||||||||  ||||| ||  ||     
T  36566400 tatttgaaaattttgaaacttaaa-gactaactttgagaattctgtcaaactaaaatgacctaattgaaactttcaaaacttaaatgactaacttaagaa 36566302  T
Q  156 ttatgtcaaactaaaaggac 175  Q
    || |||||||||||||||||    
T  36566301 ttctgtcaaactaaaaggac 36566282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 20101974 - 20101831
Alignment:
Q  27 acggtgaaatagtttatcaattaaaagac-ctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaa 125  Q
    |||||||||||||||||||| ||| |||  |||||| |||| ||| ||||||||| |||| |||||  ||| ||||| |||||||| || ||||||||||    
T  20101974 acggtgaaatagtttatcaactaagagaatctatttaaaacttttaaaacttaaaggactaacttgaaaat-ctgtcgaactaaaaggatctaattgaaa 20101876  T
Q  126 ctttcgaaacttaaaatactaaattgggagttatgtcaaactaaaa 171  Q
    |||||||||||||||| ||||| |||||| ||  ||||||||||||    
T  20101875 ctttcgaaacttaaaa-actaacttgggaattcagtcaaactaaaa 20101831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 67 - 180
Target Start/End: Original strand, 28256949 - 28257062
Alignment:
Q  67 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 166  Q
    |||| ||||||||| |||| |||||  |||| ||||||||||||||||||||||||||| |||| |||||||||| ||||| ||  || |||| ||||||    
T  28256949 atttaaaacttaaaggactaacttgaaaattttgtcaaactaaaatgacctaattgaaattttcaaaacttaaaaaactaactttagaattatatcaaac 28257048  T
Q  167 taaaaggactaaaa 180  Q
    ||||||||| ||||    
T  28257049 taaaaggacaaaaa 28257062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 57 - 128
Target Start/End: Original strand, 21433337 - 21433408
Alignment:
Q  57 tatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactt 128  Q
    |||||||||| ||||||||||||| || | ||||||||||||||||||||||||||||| ||||||||||||    
T  21433337 tatttgaaacttttgaaacttaaaggattaacttgggaattctgtcaaactaaaatgacgtaattgaaactt 21433408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 33235518 - 33235637
Alignment:
Q  22 gggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaat 120  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||||   ||||||||||||| |||| |||||  |||| ||||||||||||| |||| |||    
T  33235518 gggtaacagtgaaatagtttatcaactaaaatgacctatttgaagtttttgaaacttaaaggactaacttgataattttgtcaaactaaaaggaccaaat 33235617  T
Q  121 tgaaactttcgaaacttaaa 140  Q
    | |||||||| |||| ||||    
T  33235618 taaaactttcaaaacgtaaa 33235637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 39958776 - 39958686
Alignment:
Q  90 tgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||  ||||| ||   | |||||||||||||||||||| ||||    
T  39958776 tgggaattctgtcaaactaaaatgacttaattgaaactttcgagacttaaatgactaacttaaaaattatgtcaaactaaaaggaccaaaa 39958686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 58 - 174
Target Start/End: Complemental strand, 21413047 - 21412931
Alignment:
Q  58 atttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagtt 157  Q
    |||| |||| ||||||||||||| |||| ||||| ||||||||| |||||||||||| ||| || ||||||| ||||||||||  ||||| |||  | ||    
T  21413047 atttaaaacttttgaaacttaaaagactaacttgagaattctgtgaaactaaaatgatctatttaaaacttttgaaacttaaaggactaacttgaaaatt 21412948  T
Q  158 atgtcaaactaaaagga 174  Q
     ||||||||||||||||    
T  21412947 ctgtcaaactaaaagga 21412931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 68 - 180
Target Start/End: Original strand, 34951475 - 34951587
Alignment:
Q  68 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 167  Q
    ||||||||||||| |||||| || | |||| ||||||||||||| || |||||||||||||||||||||||||  ||||| |||  | || |||||||||    
T  34951475 tttgaaacttaaaggactgatttagaaattgtgtcaaactaaaaggatctaattgaaactttcgaaacttaaaggactaacttgataattctgtcaaact 34951574  T
Q  168 aaaaggactaaaa 180  Q
    |||| ||| ||||    
T  34951575 aaaaagaccaaaa 34951587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 5805592 - 5805679
Alignment:
Q  53 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaa 140  Q
    |||||||||||||| ||||||||||||| || | |||||  ||||| |||||||||||| ||| |||||||||||||| |||||||||    
T  5805592 gacctatttgaaacttttgaaacttaaaagattaacttgaaaattcagtcaaactaaaaggacataattgaaactttcaaaacttaaa 5805679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 14 - 171
Target Start/End: Complemental strand, 20183935 - 20183778
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| |||||||||| |||||||| |||||||| ||||| ||| |||||||||  ||||||||||||| |||| ||||||||| ||| | ||| | |||     
T  20183935 gacaacaggggtaacagtgaaataatttatcaactaaaatgacttatttgaaatttttgaaacttaaaggactaacttgggaactctattaaa-ttaaag 20183837  T
Q  113 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaa 171  Q
    || ||||||||||||||| ||| |||||  ||| |||||  | || |||||||||||||    
T  20183836 gatctaattgaaactttcaaaatttaaagaactgaattgtaaattctgtcaaactaaaa 20183778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 41020137 - 41020242
Alignment:
Q  68 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 167  Q
    |||||||||||||  | | |||| | |||||||||||||||||| || |||||| |||||||| |||||||||| ||||| |||| | ||||||||||||    
T  41020137 tttgaaacttaaagaattaacttagaaattctgtcaaactaaaaggatctaattaaaactttcaaaacttaaaa-actaacttggaaattatgtcaaact 41020235  T
Q  168 aaaagga 174  Q
    |||||||    
T  41020236 aaaagga 41020242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 4187626 - 4187545
Alignment:
Q  59 tttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaa 140  Q
    |||||||| |||||||||||||  ||| ||||||||||| |||||||| ||||  ||||||||||||||||| |||||||||    
T  4187626 tttgaaacttttgaaacttaaagaactaacttgggaattatgtcaaacaaaaagtacctaattgaaactttctaaacttaaa 4187545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 59 - 171
Target Start/End: Original strand, 21433278 - 21433391
Alignment:
Q  59 tttgaaacatttgaaacttaaatg-actgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagtt 157  Q
    |||||||  ||||||||||||| | ||| |||||||||||||||||||| ||||| || || |||||||||| ||||||||||  | ||| |||||| ||    
T  21433278 tttgaaatttttgaaacttaaaagtactaacttgggaattctgtcaaacaaaaataacttatttgaaacttttgaaacttaaaggattaacttgggaatt 21433377  T
Q  158 atgtcaaactaaaa 171  Q
     |||||||||||||    
T  21433378 ctgtcaaactaaaa 21433391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 42990658 - 42990539
Alignment:
Q  22 gggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaat 120  Q
    |||||||||| ||||||| |||||| ||||| ||| || || |||| ||| |||||||||  | | |||||  ||||||||| |||||||||||||||||    
T  42990658 gggtaacggtaaaatagtgtatcaactaaaatgacataattaaaacttttaaaacttaaaaaattaacttgaaaattctgtcgaactaaaatgacctaat 42990559  T
Q  121 tgaaactttcgaaacttaaa 140  Q
    | |||||||| |||||||||    
T  42990558 taaaactttcaaaacttaaa 42990539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 175
Target Start/End: Original strand, 8040114 - 8040266
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| |||||||||||||||||||||| ||||| |||||| |||||||||||||         ||||| |||| |||||||| ||||||||| ||||||     
T  8040114 gacagcaggggtaacggtgaaatagttcatcaactaaaaggacctatttgaaac---------ttaaaggactaacttggga-ttctgtcaagctaaaag 8040203  T
Q  113 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    || ||| |||||| ||| ||||||||||| ||||| |||| | ||  || |||||||||||||    
T  8040204 gatctatttgaaatttttgaaacttaaaagactaatttggaaattccgttaaactaaaaggac 8040266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 10620238 - 10620303
Alignment:
Q  67 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcga 132  Q
    |||||||||||||| |||| |||||| |||||||| ||||||||| | ||||||||||||||||||    
T  10620238 atttgaaacttaaaggacttacttggaaattctgttaaactaaaagggcctaattgaaactttcga 10620303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 180
Target Start/End: Complemental strand, 19925228 - 19925104
Alignment:
Q  55 cctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattggga 154  Q
    ||||||||| |  ||||||||||||| |||| | |||| |||| ||||||||||||| || |||||||||||||||||||||| ||  | ||| |||| |    
T  19925228 cctatttgatatttttgaaacttaaaggactaa-ttggaaattgtgtcaaactaaaaggatctaattgaaactttcgaaacttgaaggagtaacttggaa 19925130  T
Q  155 gttatgtcaaactaaaaggactaaaa 180  Q
     || ||||||||||||| ||| ||||    
T  19925129 attctgtcaaactaaaaagaccaaaa 19925104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 39 - 175
Target Start/End: Original strand, 20366521 - 20366658
Alignment:
Q  39 tttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaactt 137  Q
    |||||||| |||||| || |||||||||| |||||||| |||| |||| ||||| ||||| ||||||||||||| || ||  | |||||||| |||||||    
T  20366521 tttatcaactaaaaggacatatttgaaacttttgaaacctaaaggactaacttgcgaattttgtcaaactaaaaggatcttttggaaacttttgaaactt 20366620  T
Q  138 aaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    |||  ||||| |||| | || |||  ||||||||||||    
T  20366621 aaaggactaacttggaaattctgtttaactaaaaggac 20366658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 36566458 - 36566377
Alignment:
Q  59 tttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaa 140  Q
    |||||||| ||||||| ||||| |||| ||||| ||||| ||||||||||||||||| || |||||| ||| ||||||||||    
T  36566458 tttgaaacttttgaaatttaaaggactaacttgagaattttgtcaaactaaaatgacttatttgaaaattttgaaacttaaa 36566377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 128
Target Start/End: Original strand, 4187663 - 4187763
Alignment:
Q  29 ggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaact 127  Q
    |||||||||||||||||| ||||| ||||||||| |||| ||| ||| ||||| |||| |||||  |||||||||||| ||||| || |||||| |||||    
T  4187663 ggtgaaatagtttatcaactaaaatgacctatttaaaacttttaaaatttaaaggactaacttgaaaattctgtcaaattaaaaggatctaattaaaact 4187762  T
Q  128 t 128  Q
    |    
T  4187763 t 4187763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 129
Target Start/End: Original strand, 6220351 - 6220449
Alignment:
Q  31 tgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaacttt 129  Q
    |||||||||||||||| |||||| |||||||  |||| ||||||||||||| |||| ||||| ||||||| | |||||||||  |||| |||||||||||    
T  6220351 tgaaatagtttatcaactaaaagaacctattgaaaacttttgaaacttaaa-gactaacttgagaattctatgaaactaaaagtaccttattgaaacttt 6220449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 33879470 - 33879576
Alignment:
Q  68 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 167  Q
    ||||||||||||  |||| ||||||||||| |||| |||||||| |||||| |||||||||| ||||||||||  | ||| |||| | || ||||||| |    
T  33879470 tttgaaacttaag-gactaacttgggaattatgtcgaactaaaaggacctatttgaaacttttgaaacttaaaggattaacttggaaattctgtcaaatt 33879568  T
Q  168 aaaaggac 175  Q
    ||||||||    
T  33879569 aaaaggac 33879576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 1286768 - 1286834
Alignment:
Q  19 caggggtaacggtgaaatagtttatcaattaaaagacctatttgaaacatttgaaacttaaatgact 85  Q
    ||||||||||||||||||| |||||||| |||||||| ||||| |||| ||| ||||||||| ||||    
T  1286768 caggggtaacggtgaaataatttatcaactaaaagacatatttaaaacttttaaaacttaaaggact 1286834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 120 - 174
Target Start/End: Complemental strand, 1441065 - 1441011
Alignment:
Q  120 ttgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 174  Q
    |||||||||| ||||||||||||||||| |||||| || ||||||||||||||||    
T  1441065 ttgaaacttttgaaacttaaaatactaacttgggaattctgtcaaactaaaagga 1441011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 28104394 - 28104300
Alignment:
Q  23 ggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    |||||| |||||||| |||||||| ||||| ||| ||||| |||| ||||||||||||||||||  |||| ||||| || |||||||||| ||||    
T  28104394 ggtaacagtgaaataatttatcaactaaaaagacatatttaaaacttttgaaacttaaatgactaccttgtgaattatgccaaactaaaaggacc 28104300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 27995538 - 27995615
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgactt 90  Q
    |||| |||| ||||||||||||||||||||||| ||||| || |||||| |||| ||||||||||||| |||| ||||    
T  27995538 gacaacaggagtaacggtgaaatagtttatcaactaaaaggatctatttaaaacttttgaaacttaaaggactaactt 27995615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 59 - 111
Target Start/End: Complemental strand, 1441066 - 1441014
Alignment:
Q  59 tttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 111  Q
    |||||||| |||||||||||||  ||| |||||||||||||||||||||||||    
T  1441066 tttgaaacttttgaaacttaaaatactaacttgggaattctgtcaaactaaaa 1441014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 82 - 201
Target Start/End: Complemental strand, 5075444 - 5075325
Alignment:
Q  82 gactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga-ctaaaa 180  Q
    |||| ||||| ||||||||||||| ||||| |||  ||||||||||||  |||||||||  ||||| ||| ||| | |||||||||||||| | | || |    
T  5075444 gactaacttgagaattctgtcaaa-taaaaggactcaattgaaacttttaaaacttaaaggactaacttgagagatctgtcaaactaaaagaatcaaaca 5075346  T
Q  181 tgatttttgacctaaaatata 201  Q
    |||| ||||||||||||||||    
T  5075345 tgatatttgacctaaaatata 5075325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 5805104 - 5805041
Alignment:
Q  53 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    |||||| ||||||| || |||||||||| |||| ||||| ||||||||||||||||||| ||||    
T  5805104 gacctaattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaaggacc 5805041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 29591057 - 29591171
Alignment:
Q  57 tatttgaaacatttgaaacttaaatgactg--acttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattggga 154  Q
    ||||| |||| ||||||||||||| || |   ||||| | ||| ||||||||||||||||||||||| ||||||| ||||||||||  ||||| |||  |    
T  29591057 tatttaaaacttttgaaacttaaaggattataacttgcggattttgtcaaactaaaatgacctaattaaaacttttgaaacttaaaggactaacttgata 29591156  T
Q  155 gttatgtcaaactaa 169  Q
     |||| |||||||||    
T  29591157 attatatcaaactaa 29591171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 175
Target Start/End: Complemental strand, 35214942 - 35214871
Alignment:
Q  104 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    |||||||| |||||| |||||| ||| ||||||||||| ||||| ||| || || |||||||||||||||||    
T  35214942 aactaaaaagacctatttgaaatttttgaaacttaaaagactaacttgagaattctgtcaaactaaaaggac 35214871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 174
Target Start/End: Original strand, 19925327 - 19925397
Alignment:
Q  104 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 174  Q
    |||| ||| |||||| |||||||||| ||||||||||  ||||| |||||| || ||||||||||||||||    
T  19925327 aactgaaaggacctatttgaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaagga 19925397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 34951415 - 34951521
Alignment:
Q  68 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 167  Q
    |||||||||||||||||| ||||| ||||| ||||||||||||| | | || || | ||||| ||||||||||  ||| | || | | || |||||||||    
T  34951415 tttgaaacttaaatgactaacttgagaattgtgtcaaactaaaaggtcatattttatacttttgaaacttaaaggactgatttagaaattgtgtcaaact 34951514  T
Q  168 aaaagga 174  Q
    |||||||    
T  34951515 aaaagga 34951521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 175
Target Start/End: Complemental strand, 40904837 - 40904755
Alignment:
Q  93 gaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    ||||||||||||| ||||| || ||| ||||||||||  |||||||||  ||||| |||  | ||||||||||||||||||||    
T  40904837 gaattctgtcaaattaaaaggatctatttgaaacttttaaaacttaaatgactaatttgaaaattatgtcaaactaaaaggac 40904755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 5559171 - 5559110
Alignment:
Q  56 ctatttgaaacatttgaaacttaaatg-actgacttgggaattctgtcaaactaaaatgacc 116  Q
    ||||||||||| ||||||||||||| | ||| ||||||||||||||||||| ||||| ||||    
T  5559171 ctatttgaaacttttgaaacttaaaaggactaacttgggaattctgtcaaattaaaaggacc 5559110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 104 - 197
Target Start/End: Complemental strand, 28104372 - 28104279
Alignment:
Q  104 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaatgatttttgacctaaaa 197  Q
    |||||||| ||| || || ||||||| ||||||||||  ||||  ||| || ||||| |||||||||||||| ||||| || ||||||||||||    
T  28104372 aactaaaaagacatatttaaaacttttgaaacttaaatgactaccttgtgaattatgccaaactaaaaggaccaaaataatatttgacctaaaa 28104279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 31893438 - 31893498
Alignment:
Q  68 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactt 128  Q
    ||||||||||||| |||| ||||| ||||| ||||||||||||| ||| || |||||||||    
T  31893438 tttgaaacttaaaggactaacttgagaattttgtcaaactaaaaggacttatttgaaactt 31893498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 141
Target Start/End: Complemental strand, 33879417 - 33879349
Alignment:
Q  73 aacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaa 141  Q
    |||| |||||||| |||||  |||||||||||| ||||| || |||||| |||||||| ||||||||||    
T  33879417 aactaaaatgactaacttgataattctgtcaaaataaaaggatctaattaaaactttcaaaacttaaaa 33879349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 5805583 - 5805654
Alignment:
Q  104 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    ||||||||||||||| |||||||||| ||||||||||| | ||| |||  | ||  ||||||||||||||||    
T  5805583 aactaaaatgacctatttgaaacttttgaaacttaaaagattaacttgaaaattcagtcaaactaaaaggac 5805654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 21433282 - 21433207
Alignment:
Q  101 tcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggact 176  Q
    |||||||||||  || || |||||||||| ||||||||||  ||||| |||||| || | ||||||||||||||||    
T  21433282 tcaaactaaaagaacttatttgaaacttttgaaacttaaatgactaacttgggaattctttcaaactaaaaggact 21433207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 31175946 - 31176017
Alignment:
Q  104 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    |||||||| |||||  |||||||||| ||||||||||  ||||| |||| | || |||||||||||||||||    
T  31175946 aactaaaaggacctctttgaaacttttgaaacttaaaggactaacttggaaattctgtcaaactaaaaggac 31176017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 31893534 - 31893597
Alignment:
Q  53 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    |||||| ||||||| ||| ||||||||| |||| |||| | |||||||||||||||||| ||||    
T  31893534 gacctaattgaaacttttaaaacttaaaggactaacttagaaattctgtcaaactaaaaggacc 31893597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 175
Target Start/End: Complemental strand, 34951362 - 34951291
Alignment:
Q  104 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    |||||||||||| || |||||||||| ||||||||||  ||||| ||  || ||||||||||| ||||||||    
T  34951362 aactaaaatgacttatttgaaacttttgaaacttaaaggactaacttaagaattatgtcaaacgaaaaggac 34951291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 36566344 - 36566281
Alignment:
Q  53 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    |||||| ||||||| ||  |||||||||||||| ||||  ||||||||||||||||||| ||||    
T  36566344 gacctaattgaaactttcaaaacttaaatgactaacttaagaattctgtcaaactaaaaggacc 36566281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 110
Target Start/End: Original strand, 36566525 - 36566568
Alignment:
Q  67 atttgaaacttaaatgactgacttgggaattctgtcaaactaaa 110  Q
    |||||||||||||| |||| |||||| |||||||||||||||||    
T  36566525 atttgaaacttaaaagactaacttggaaattctgtcaaactaaa 36566568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 111
Target Start/End: Complemental strand, 31893316 - 31893258
Alignment:
Q  53 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 111  Q
    |||||| ||||||| || ||||||||||  ||| ||||| |||||||||||||||||||    
T  31893316 gacctaattgaaactttcgaaacttaaaaaactaacttgagaattctgtcaaactaaaa 31893258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 33235100 - 33235039
Alignment:
Q  53 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatga 114  Q
    |||||| ||||||| ||| ||| ||||| || | ||||| ||||||||||||||||||||||    
T  33235100 gacctaattgaaacttttaaaatttaaaggattaacttgagaattctgtcaaactaaaatga 33235039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 4187625 - 4187573
Alignment:
Q  120 ttgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaag 172  Q
    |||||||||| ||||||||||  ||||| |||||| ||||||||||| |||||    
T  4187625 ttgaaacttttgaaacttaaagaactaacttgggaattatgtcaaacaaaaag 4187573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 10619935 - 10619867
Alignment:
Q  104 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaag 172  Q
    |||||||| |||||| |||||||||| ||||||||||  ||||| |||  | || ||||||||||||||    
T  10619935 aactaaaaggacctatttgaaacttttgaaacttaaaggactaacttgacaattgtgtcaaactaaaag 10619867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 27995112 - 27995064
Alignment:
Q  68 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    |||||||||||||  ||| ||||| ||||||||||||||||||| ||||    
T  27995112 tttgaaacttaaaacactaacttgagaattctgtcaaactaaaaggacc 27995064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 34951527 - 34951583
Alignment:
Q  60 ttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    ||||||| || |||||||||| |||| |||||  |||||||||||||||||| ||||    
T  34951527 ttgaaactttcgaaacttaaaggactaacttgataattctgtcaaactaaaaagacc 34951583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 7e-40; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 21 - 171
Target Start/End: Original strand, 36418365 - 36418516
Alignment:
Q  21 ggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaa 119  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||| |||| |||||  |||| ||||||||||||| |||||||    
T  36418365 ggggtaacggtgaaatagtttatcaactaaaaggacctatttgaaacttttgaaacttaaaggactaacttgaaaattatgtcaaactaaaaggacctaa 36418464  T
Q  120 ttgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaa 171  Q
    |||||||||| ||||| ||||  ||||| ||| || ||||||||||||||||    
T  36418465 ttgaaacttttgaaacgtaaaggactaacttgagaattatgtcaaactaaaa 36418516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 22 - 180
Target Start/End: Complemental strand, 20728686 - 20728527
Alignment:
Q  22 gggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaat 120  Q
    |||||||||||||||||||| |||| ||||| ||| |||||||||| ||| ||||||||| |||| ||||| ||||||||| ||||||||| ||||||||    
T  20728686 gggtaacggtgaaatagtttttcaactaaaaagacatatttgaaacttttaaaacttaaaggactaacttgagaattctgttaaactaaaaggacctaat 20728587  T
Q  121 tgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    |||| |||||||||||||||  ||||| |||| | || ||||||||||||| ||| ||||    
T  20728586 tgaatctttcgaaacttaaaggactaacttggaaattctgtcaaactaaaaagaccaaaa 20728527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 26 - 180
Target Start/End: Complemental strand, 13543241 - 13543083
Alignment:
Q  26 aacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactga---cttgggaattctgtcaaactaaaatgacctaatt 121  Q
    |||||||||||| |||||||| ||||| ||| |||||||||| ||||||||||||| |||| |   ||||| |||||  ||||||||||| |||||||||    
T  13543241 aacggtgaaataatttatcaactaaaatgacatatttgaaacttttgaaacttaaaggactaataacttggaaattccatcaaactaaaaagacctaatt 13543142  T
Q  122 gaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    |||||||||||||||||||  | ||| || ||| |||||||||||||||||||| ||||    
T  13543141 gaaactttcgaaacttaaagaattaacttaggaattatgtcaaactaaaaggaccaaaa 13543083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 22 - 174
Target Start/End: Original strand, 30738223 - 30738377
Alignment:
Q  22 gggtaacggtgaaatagtttatca--attaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgaccta 118  Q
    ||||||||||||||||||||||||  | ||||| ||| |||||||||| |||||||| |||| |||  ||||| ||||||||||||| ||||||||||||    
T  30738223 gggtaacggtgaaatagtttatcacaactaaaatgacatatttgaaacttttgaaacataaaggacaaacttgagaattctgtcaaattaaaatgaccta 30738322  T
Q  119 attgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 174  Q
    ||| ||| ||||||||||||||||||||| || | | || ||||||||||||||||    
T  30738323 att-aaaatttcgaaacttaaaatactaacttcgaaattctgtcaaactaaaagga 30738377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 18249124 - 18248996
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| ||||||||||| |||||||||||||||| ||||| ||||||||| |||| |||||||||||||||||| ||||| ||||||||| |||||||||     
T  18249124 gacagcaggggtaacgatgaaatagtttatcaactaaaaagacctatttaaaacttttgaaacttaaatgactaacttgagaattctgttaaactaaaag 18249025  T
Q  113 gacctaattgaaactttcgaaacttaaaa 141  Q
    ||| || || |||||||| |||| |||||    
T  18249024 gacatagttaaaactttcaaaacgtaaaa 18248996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 5734628 - 5734502
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| ||||||||||||||||||||||||| || ||||| ||| |||||||||| ||| ||||||||| || | |||| |||||||||||||| ||||||    
T  5734628 gacagcaggggtaacggtgaaatagtttattaactaaaatgacttatttgaaacttttaaaacttaaagga-taacttaggaattctgtcaaattaaaat 5734530  T
Q  113 gacctaattgaaactttcgaaacttaaa 140  Q
    ||| |||||||||||||| |||||||||    
T  5734529 gacataattgaaactttcaaaacttaaa 5734502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 27 - 193
Target Start/End: Original strand, 6336298 - 6336458
Alignment:
Q  27 acggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaa 125  Q
    |||||||||||||||||||| | |||| || |||||||||||||||||| ||||| |||| |||| ||||||||| |||| |||||  | ||||||||||    
T  6336298 acggtgaaatagtttatcaactgaaaggacatatttgaaacatttgaaatttaaaggactaacttaggaattctgacaaattaaaagaatctaattgaaa 6336397  T
Q  126 ctttcgaaactt-aaaatactaaattgggagttatgtcaaactaaaaggactaaaatgatttttgacct 193  Q
    |||||||||||| |||| |||||        |||||||||||||||||||| |||||||| ||||||||    
T  6336398 ctttcgaaacttaaaaagactaa--------ttatgtcaaactaaaaggaccaaaatgatatttgacct 6336458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 5734944 - 5735100
Alignment:
Q  19 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 117  Q
    ||||||||| |||||||||||||||||| ||||| |||||||||||||| |||| |||||||| |||| ||||| ||||||||| ||||||||| ||| |    
T  5734944 caggggtaatggtgaaatagtttatcaactaaaatgacctatttgaaacttttg-aacttaaaggactaacttgagaattctgttaaactaaaaggacat 5735042  T
Q  118 aattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    |||| ||| |||||||| |||||  ||||| ||| || ||   |||||||||||||||    
T  5735043 aattaaaattttcgaaatttaaatgactaacttgagaattcgatcaaactaaaaggac 5735100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 32660379 - 32660266
Alignment:
Q  59 tttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagtta 158  Q
    |||||||| ||||||||||||| |||| |||| ||||||||||||||||||||||||||| |||||||||| ||||||||||  ||||| ||| || ||     
T  32660379 tttgaaacttttgaaacttaaaggactaacttaggaattctgtcaaactaaaatgacctatttgaaacttttgaaacttaaaggactaacttgagaattt 32660280  T
Q  159 tgtcaaactaaaag 172  Q
    ||| ||||||||||    
T  32660279 tgtaaaactaaaag 32660266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 140
Target Start/End: Complemental strand, 30737900 - 30737779
Alignment:
Q  20 aggggtaacggtgaaatagtttatcaa-ttaaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgaccta 118  Q
    |||||||||||| ||| |||||||||| ||||| ||| ||||| |||| ||||||||||||| |||| | ||| ||||| ||||||||||||| ||| ||    
T  30737900 aggggtaacggtaaaacagtttatcaacttaaatgacttatttaaaacttttgaaacttaaaagactaatttgagaattatgtcaaactaaaaagacgta 30737801  T
Q  119 attgaaactttcgaaacttaaa 140  Q
    |||||||||||||||| |||||    
T  30737800 attgaaactttcgaaatttaaa 30737779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 6336263 - 6336147
Alignment:
Q  59 tttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagtta 158  Q
    |||||||| ||||||||||||| |||| |||||| |||||| |||||||||||||||||| || ||||||| ||||||||||  ||||| |||| | ||     
T  6336263 tttgaaacttttgaaacttaaaggactaacttggaaattctttcaaactaaaatgacctatttaaaacttttgaaacttaaaggactaacttggaaattc 6336164  T
Q  159 tgtcaaactaaaaggac 175  Q
    || ||||||||||||||    
T  6336163 tgccaaactaaaaggac 6336147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 32459525 - 32459430
Alignment:
Q  22 gggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    ||||||| ||||||||||||||||| ||||| ||||||||| |||| |||||||||||||||||| ||||| ||||| ||||||||||||| ||||    
T  32459525 gggtaacagtgaaatagtttatcaactaaaatgacctatttaaaacttttgaaacttaaatgactaacttgtgaattttgtcaaactaaaaggacc 32459430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 68 - 194
Target Start/End: Complemental strand, 35190024 - 35189898
Alignment:
Q  68 tttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaact 167  Q
    ||||||||||||| |||| |||||||| ||||||||||||||||||||||| || ||||||||||||||| ||| ||||| ||| || || | ||||| |    
T  35190024 tttgaaacttaaaggactaacttgggagttctgtcaaactaaaatgacctatttaaaactttcgaaactt-aaagactaacttgagaattctatcaaatt 35189926  T
Q  168 aaaaggactaaaa-tgatttttgaccta 194  Q
    |||| |||||||| |||| |||||||||    
T  35189925 aaaatgactaaaagtgatatttgaccta 35189898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 175
Target Start/End: Complemental strand, 18951429 - 18951307
Alignment:
Q  53 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgg 152  Q
    ||||||||| |||| ||| ||||||||| |||| ||||| ||||||| ||||||||||| || ||| || ||||||| ||||||||||  ||||| ||||    
T  18951429 gacctatttaaaacttttaaaacttaaaggactaacttgagaattctatcaaactaaaaggatctatttaaaacttttgaaacttaaaggactaacttgg 18951330  T
Q  153 gagttatgtcaaactaaaaggac 175  Q
    || || |||||||||||||||||    
T  18951329 gaattctgtcaaactaaaaggac 18951307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 67 - 172
Target Start/End: Complemental strand, 26275616 - 26275511
Alignment:
Q  67 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 166  Q
    ||||||||||| ||||||| |||||||||||| ||||||||||||||| ||| |||||||||| ||||||||||  ||||| || | | || ||||||||    
T  26275616 atttgaaacttgaatgactaacttgggaattccgtcaaactaaaatgatctatttgaaacttttgaaacttaaagaactaacttagaaattctgtcaaac 26275517  T
Q  167 taaaag 172  Q
    ||||||    
T  26275516 taaaag 26275511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 32660325 - 32660238
Alignment:
Q  53 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaa 140  Q
    |||||||||||||| ||||||||||||| |||| ||||| ||||| ||| |||||||||  || ||||||||||||||||||||||||    
T  32660325 gacctatttgaaacttttgaaacttaaaggactaacttgagaattttgtaaaactaaaagaacataattgaaactttcgaaacttaaa 32660238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 180
Target Start/End: Complemental strand, 13538625 - 13538468
Alignment:
Q  19 caggggtaacggtgaaatagtttatcaattaaaagacctatttgaaacatttgaaacttaaatg----actgacttgggaattctgtcaaactaaaatga 114  Q
    |||||||||||||||||||||||||||| |||||        ||| | |||||||||||||| |    | | |||||  |||||| ||||||||||  ||    
T  13538625 caggggtaacggtgaaatagtttatcaactaaaa--------tgacatatttgaaacttaaaaggactaataacttgaaaattctatcaaactaaacaga 13538534  T
Q  115 cctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    ||||||||||||||||||||| ||||  ||||| || ||| |||||||||||||||||||| ||||    
T  13538533 cctaattgaaactttcgaaacgtaaaggactaacttaggaattatgtcaaactaaaaggaccaaaa 13538468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 174
Target Start/End: Complemental strand, 36417998 - 36417891
Alignment:
Q  67 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaac 166  Q
    |||||||||||||| |||| ||||| ||||| |||||||| ||||  ||||||||||||||||||||| |||||  ||||| ||| || || ||| ||||    
T  36417998 atttgaaacttaaaggactaacttgagaattatgtcaaaccaaaagaacctaattgaaactttcgaaatttaaaggactaacttgagaattctgttaaac 36417899  T
Q  167 taaaagga 174  Q
    ||||||||    
T  36417898 taaaagga 36417891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 180
Target Start/End: Original strand, 13543569 - 13543727
Alignment:
Q  23 ggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaatt 121  Q
    |||||| ||||||||||||||||| |||||| ||||||||||||| ||||||| ||||| || | ||||  |||||||  |||||||||| || ||  |     
T  13543569 ggtaacagtgaaatagtttatcaagtaaaagaacctatttgaaacttttgaaatttaaaggattaacttaagaattcttccaaactaaaaggatctgtta 13543668  T
Q  122 gaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
     ||||||| |||| |||||| ||||| ||| || || ||||||||||||| || |||||    
T  13543669 aaaacttttgaaatttaaaaaactaatttgagaattctgtcaaactaaaaagagtaaaa 13543727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 111
Target Start/End: Original strand, 20729010 - 20729100
Alignment:
Q  22 gggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 111  Q
    |||||| |||||||||||||||||| |||||| ||||||||||||| ||| ||| ||||| |||| |||||  ||||||||||||||||||    
T  20729010 gggtaatggtgaaatagtttatcaactaaaaggacctatttgaaacttttaaaatttaaaggactaacttgaaaattctgtcaaactaaaa 20729100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 93 - 174
Target Start/End: Original strand, 38405573 - 38405654
Alignment:
Q  93 gaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 174  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||  | ||| |||||| || ||| ||||||||||||    
T  38405573 gaattctgccaaactaaaatgacataattgaaactttcgaaacttaaatgattaacttgggaattctgtgaaactaaaagga 38405654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 18238306 - 18238390
Alignment:
Q  24 gtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaact 107  Q
    |||||||||||||| |||||||| ||||| ||||||||| |||| ||||||||||||| |||| |||||| |||| |||||||||    
T  18238306 gtaacggtgaaataatttatcaactaaaatgacctatttaaaacttttgaaacttaaacgactaacttggaaattttgtcaaact 18238390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 111
Target Start/End: Original strand, 35891219 - 35891317
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaagacct-atttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 111  Q
    |||| ||||||||||| ||||||||||||||||  |||| | || ||||||||| ||||||||||||| |||| |||||  |||| |||||||||||||    
T  35891219 gacagcaggggtaacgctgaaatagtttatcaacaaaaaaaacttatttgaaacttttgaaacttaaaggactaacttgaaaattatgtcaaactaaaa 35891317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 67 - 116
Target Start/End: Original strand, 31813954 - 31814003
Alignment:
Q  67 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  31813954 atttgaaacttaaatgactaacttgggaattctgtcaaactaaaaggacc 31814003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 175
Target Start/End: Complemental strand, 1722648 - 1722504
Alignment:
Q  32 gaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttc 130  Q
    |||||| ||||| || ||||| ||| |||||||||| ||||||||||||| || | ||||| ||||| |||||||||||||  | ||| || |||||||     
T  1722648 gaaataatttataaactaaaatgacatatttgaaacttttgaaacttaaaggattaacttgagaattatgtcaaactaaaagaatctatttaaaactttt 1722549  T
Q  131 gaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    |||| |||||  ||||| ||| || || ||| |||||||||||||    
T  1722548 gaaaattaaaggactaacttgtgaattttgttaaactaaaaggac 1722504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 18951366 - 18951306
Alignment:
Q  56 ctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    |||||| |||| ||||||||||||| |||| ||||||||||||||||||||||||| ||||    
T  18951366 ctatttaaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggacc 18951306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 35190426 - 35190497
Alignment:
Q  69 ttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaa 140  Q
    |||||||||||| |||  | ||| ||||| ||||||||||||| |||||||||||||||||| |||||||||    
T  35190426 ttgaaacttaaaagacaaatttgagaattttgtcaaactaaaaggacctaattgaaactttcaaaacttaaa 35190497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 57 - 180
Target Start/End: Complemental strand, 14235688 - 14235567
Alignment:
Q  57 tatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagt 156  Q
    |||||||||| | ||||||  ||| |||| ||||| ||||||||||||||||||| ||||||||| |||||||   ||||||||  ||||| ||   | |    
T  14235688 tatttgaaacttgtgaaac--aaaggactaacttgagaattctgtcaaactaaaaggacctaattaaaacttttagaacttaaaggactaacttaaaaat 14235591  T
Q  157 tatgtcaaactaaaaggactaaaa 180  Q
    ||| ||||||||||||||| ||||    
T  14235590 tatttcaaactaaaaggaccaaaa 14235567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 104 - 180
Target Start/End: Complemental strand, 32459502 - 32459426
Alignment:
Q  104 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    ||||||||||||||| || ||||||| ||||||||||  ||||| ||| || || ||||||||||||||||| ||||    
T  32459502 aactaaaatgacctatttaaaacttttgaaacttaaatgactaacttgtgaattttgtcaaactaaaaggaccaaaa 32459426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 6336209 - 6336146
Alignment:
Q  53 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    ||||||||| |||| ||||||||||||| |||| |||||| ||||||| |||||||||| ||||    
T  6336209 gacctatttaaaacttttgaaacttaaaggactaacttggaaattctgccaaactaaaaggacc 6336146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 36418389 - 36418460
Alignment:
Q  104 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    |||||||| |||||| |||||||||| ||||||||||  ||||| |||  | ||||||||||||||||||||    
T  36418389 aactaaaaggacctatttgaaacttttgaaacttaaaggactaacttgaaaattatgtcaaactaaaaggac 36418460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 93 - 174
Target Start/End: Complemental strand, 18951449 - 18951368
Alignment:
Q  93 gaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 174  Q
    ||||||| |||||||||||||||||| || |||||||  |||||||||  ||||| ||| || || | ||||||||||||||    
T  18951449 gaattctatcaaactaaaatgacctatttaaaacttttaaaacttaaaggactaacttgagaattctatcaaactaaaagga 18951368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 174
Target Start/End: Complemental strand, 19278862 - 19278710
Alignment:
Q  22 gggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaat 120  Q
    ||||||| ||||||||||||||||| ||||| ||  |||||||||   ||||||||||||    | ||||| |||||||||||||||||||  | |||||    
T  19278862 gggtaacagtgaaatagtttatcaactaaaatgatttatttgaaattattgaaacttaaagaggtaacttgagaattctgtcaaactaaaagaagctaat 19278763  T
Q  121 tgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga 174  Q
    | ||| ||| |||| |||||  ||||| ||  || || ||||||||||||||||    
T  19278762 t-aaaattttgaaatttaaaggactaacttaagaattctgtcaaactaaaagga 19278710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 32459822 - 32459911
Alignment:
Q  23 ggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 111  Q
    |||||| ||||||||||||||| | |||||| ||||||||||||  ||| ||||||||| |||| | ||| |||||| ||||||| ||||    
T  32459822 ggtaacagtgaaatagtttatcgactaaaaggacctatttgaaatttttaaaacttaaaagactaatttgagaattcggtcaaacgaaaa 32459911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 1722933 - 1723044
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| |||||||||| ||||||||||||||||| ||||| ||  ||||| |||| ||| |||||||||  ||| |||| | |||| ||| |||||||||     
T  1722933 gacagcaggggtaacagtgaaatagtttatcaactaaaatgatatatttaaaacttttaaaacttaaaacactaacttagaaattttgttaaactaaaag 1723032  T
Q  113 gacctaattgaa 124  Q
    ||  ||||||||    
T  1723033 gatttaattgaa 1723044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 26275567 - 26275512
Alignment:
Q  56 ctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 111  Q
    ||||||||||| |||||||||||||  ||| |||| | ||||||||||||||||||    
T  26275567 ctatttgaaacttttgaaacttaaagaactaacttagaaattctgtcaaactaaaa 26275512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 26275971 - 26276055
Alignment:
Q  19 caggggtaacggtgaaatagtttatcaattaaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 111  Q
    |||||||||||||||||||| ||||||| ||||||        || | |||||||||||||| |||| |||||| |||| |||||||||||||    
T  26275971 caggggtaacggtgaaatagcttatcaactaaaag--------gacatatttgaaacttaaaggactaacttggaaattttgtcaaactaaaa 26276055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 30737875 - 30737808
Alignment:
Q  104 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaa 171  Q
    |||| ||||||| || || ||||||| ||||||||||| ||||| ||| || ||||||||||||||||    
T  30737875 aacttaaatgacttatttaaaacttttgaaacttaaaagactaatttgagaattatgtcaaactaaaa 30737808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 36418458 - 36418521
Alignment:
Q  53 gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    |||||| ||||||| |||||||| |||| |||| ||||| ||||| ||||||||||||| ||||    
T  36418458 gacctaattgaaacttttgaaacgtaaaggactaacttgagaattatgtcaaactaaaaagacc 36418521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 38405600 - 38405651
Alignment:
Q  60 ttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 111  Q
    ||||||| || ||||||||||||| | ||||||||||||||| |||||||||    
T  38405600 ttgaaactttcgaaacttaaatgattaacttgggaattctgtgaaactaaaa 38405651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 111
Target Start/End: Complemental strand, 18238010 - 18237920
Alignment:
Q  22 gggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 111  Q
    ||||||| |||||||| |||||||| |||||| || ||||| |||| ||| ||||||||| || | ||||   ||||||||||||||||||    
T  18238010 gggtaacagtgaaatattttatcaactaaaaggacttatttaaaacttttaaaacttaaaggattaacttaaaaattctgtcaaactaaaa 18237920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 111
Target Start/End: Original strand, 31813894 - 31813948
Alignment:
Q  57 tatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 111  Q
    |||||||||| ||||||| | |||||||  ||||| |||||||||||||||||||    
T  31813894 tatttgaaacttttgaaattaaaatgacatacttgagaattctgtcaaactaaaa 31813948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 4e-38; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 14 - 196
Target Start/End: Original strand, 31247602 - 31247786
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| |||||||||  |||||||| |||||||| ||||| ||| |||||||||| |||||||||||||  ||| |||||||||||||||| ||||||||     
T  31247602 gacaacaggggtaatagtgaaataatttatcaactaaaatgacatatttgaaacttttgaaacttaaagcactaacttgggaattctgtccaactaaaag 31247701  T
Q  113 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa-tgatttttgacctaaa 196  Q
    ||||||||||||||||||||||||||||  ||||| |||| | || ||||||| ||||||||| |||| |||| |||| ||||||    
T  31247702 gacctaattgaaactttcgaaacttaaaggactaacttggaaattctgtcaaattaaaaggaccaaaagtgatatttggcctaaa 31247786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 4276301 - 4276174
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| |||||||||| ||||||||||||||||| ||||| || ||||||||||| |||||||||||||  ||| || |   |||| |||||||||||||     
T  4276301 gacagcaggggtaacagtgaaatagtttatcaactaaaatgaactatttgaaacttttgaaacttaaagaactaacataaaaattatgtcaaactaaaaa 4276202  T
Q  113 gacctaattgaaactttcgaaacttaaa 140  Q
    ||| |||||||||||||| |||||||||    
T  4276201 gacttaattgaaactttcaaaacttaaa 4276174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 92 - 175
Target Start/End: Original strand, 21377036 - 21377119
Alignment:
Q  92 ggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||| || ||| |||| | || |||||||||||||||||    
T  21377036 ggaattatgtcaaactaaaatgacctaattgaaactttcgaaatttaaagtattaacttggaaattctgtcaaactaaaaggac 21377119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 19 - 141
Target Start/End: Complemental strand, 35555688 - 35555565
Alignment:
Q  19 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 117  Q
    ||||| |||||||||||||||||||||| ||||| ||  |||||||||| ||  ||| ||||  |||| |||||  |||||||||||||||||||||  |    
T  35555688 cagggataacggtgaaatagtttatcaactaaaatgatttatttgaaactttcaaaatttaatggactaacttgataattctgtcaaactaaaatgattt 35555589  T
Q  118 aattgaaactttcgaaacttaaaa 141  Q
    |||||||||||| |||||||||||    
T  35555588 aattgaaacttttgaaacttaaaa 35555565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 50530332 - 50530230
Alignment:
Q  93 gaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga-ctaaaatgatttttgac 191  Q
    ||||||||||||||||||||||||||||| | ||||| ||||||||||| ||||| |||  | || |||||||||||||||| | |||||||| ||||||    
T  50530332 gaattctgtcaaactaaaatgacctaattaatacttttgaaacttaaaagactaagttgaaaattctgtcaaactaaaaggatcaaaaatgatatttgac 50530233  T
Q  192 cta 194  Q
    |||    
T  50530232 cta 50530230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 4276628 - 4276689
Alignment:
Q  67 atttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactt 128  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||    
T  4276628 atttgaaacttaaaggactaacttgggaattctgtcaaactaaaatgatctaattgaaactt 4276689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 3088066 - 3088218
Alignment:
Q  20 aggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgaccta 118  Q
    |||| ||||||||||||||||||||||||||||| ||||||||         |||||||||| |||| ||| || |||  ||||||||||||| ||| ||    
T  3088066 agggataacggtgaaatagtttatcaattaaaaggacctattt---------gaaacttaaaggactaactaggaaatcatgtcaaactaaaaggacata 3088156  T
Q  119 attgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    |||||||||||||||| |||||  | ||| |||  | || ||||||||||||||||| ||||    
T  3088157 attgaaactttcgaaatttaaagcattaacttgaaaattctgtcaaactaaaaggaccaaaa 3088218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 21376732 - 21376565
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| ||| |||||||||||||||||||||||| ||||| ||| ||||| |||| ||||||||||||| |||  || ||  |||||| |||||||||||     
T  21376732 gacagcagtggtaacggtgaaatagtttatcaactaaaatgacatatttaaaacttttgaaacttaaaggaccaacctgaaaattctatcaaactaaaag 21376633  T
Q  113 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
     || ||||| |||||||  ||| ||||||  |||| ||   ||||  |||||| ||||||||||||||    
T  21376632 aacttaattaaaacttttaaaatttaaaagtctaacttaaaagttcagtcaaattaaaaggactaaaa 21376565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 174
Target Start/End: Complemental strand, 14964749 - 14964648
Alignment:
Q  72 aaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaa 171  Q
    ||||| ||| |||| | ||| ||||||||||||||||||| ||| |||||||||||||| |||||| ||| ||||| |||||| ||| || |||||||||    
T  14964749 aaactaaaaggacttatttgagaattctgtcaaactaaaaagacataattgaaactttcaaaactt-aaagactaacttgggaattaagttaaactaaaa 14964651  T
Q  172 gga 174  Q
    |||    
T  14964650 gga 14964648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 24 - 111
Target Start/End: Complemental strand, 19153974 - 19153885
Alignment:
Q  24 gtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttg-ggaattctgtcaaactaaaa 111  Q
    ||||| |||||||| |||||||| ||||| ||| ||||||||||||||||||||||||| ||| |||||   ||||||||||||||||||    
T  19153974 gtaacagtgaaataatttatcaactaaaaagacatatttgaaacatttgaaacttaaataactaacttgacaaattctgtcaaactaaaa 19153885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 111
Target Start/End: Complemental strand, 54456764 - 54456679
Alignment:
Q  27 acggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 111  Q
    |||||||| ||||||||||| ||||| ||| |||||||||| || ||||||||||||||| | || | ||||||||||||||||||    
T  54456764 acggtgaattagtttatcaactaaaatgacatatttgaaactttcgaaacttaaatgactaatttcgaaattctgtcaaactaaaa 54456679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 54456799 - 54456912
Alignment:
Q  59 tttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagtta 158  Q
    |||||||| ||||||||||||| |||| |||||| |||| ||||||| ||||| |||||| |||||||||| || ||||||   | ||| |||| ||||     
T  54456799 tttgaaacttttgaaacttaaaggactaacttggaaattatgtcaaattaaaaggacctatttgaaacttttgatacttaagggaataatttggaagttc 54456898  T
Q  159 tgtcaaactaaaag 172  Q
    | ||||||||||||    
T  54456899 tatcaaactaaaag 54456912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 198
Target Start/End: Complemental strand, 54456746 - 54456651
Alignment:
Q  104 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaagga-ctaaaatgatttttgacctaaaat 198  Q
    |||||||||||| || |||||||||||||||||||||  ||||| || | | || |||||||||||||||| | |||||||| |||||||| ||||    
T  54456746 aactaaaatgacatatttgaaactttcgaaacttaaatgactaatttcgaaattctgtcaaactaaaaggatcaaaaatgatatttgaccttaaat 54456651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 31247292 - 31247195
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 111  Q
    |||| |||| ||||| || |||||||||||||| ||| || || |||||||||| ||||||||||||| |||| ||||| ||||| |||||||||||||    
T  31247292 gacagcaggagtaacagtaaaatagtttatcaactaataggacttatttgaaacttttgaaacttaaa-gactaacttgagaattttgtcaaactaaaa 31247195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 14629382 - 14629288
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaaga-cctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| ||||||||||||||||||| |||||||| ||||||| ||||||||||||         ||||| |||| ||||||||||||||||||| |||||     
T  14629382 gacaacaggggtaacggtgaaataatttatcaactaaaagaacctatttgaaac---------ttaaaggactaacttgggaattctgtcaaagtaaaag 14629292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 21410273 - 21410355
Alignment:
Q  23 ggtaacggtgaaatagtttatcaattaaaa-gaccta-tttgaaacatttgaaacttaaatgactgacttgggaattctgtcaa 104  Q
    |||||| ||||||||||||||||| ||||| ||| || ||| |||| |||||||||||||||| |||||| |||||||||||||    
T  21410273 ggtaacagtgaaatagtttatcaactaaaatgacataatttaaaacttttgaaacttaaatgattgactt-ggaattctgtcaa 21410355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 111
Target Start/End: Complemental strand, 24707558 - 24707475
Alignment:
Q  29 ggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 111  Q
    |||||||||||||||||| ||||| ||  ||||| |||| ||  ||||||||| |||| |||||| |||||||| |||||||||    
T  24707558 ggtgaaatagtttatcaactaaaatgatatatttaaaactttgaaaacttaaaggactaacttggaaattctgtaaaactaaaa 24707475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 136
Target Start/End: Original strand, 5505741 - 5505822
Alignment:
Q  56 ctatttgaaacatttgaaacttaaatg-actgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaact 136  Q
    |||||| |||| ||||||||||||| | ||| | || | |||| |||||||| |||| || |||||||||||||||||||||    
T  5505741 ctatttaaaacttttgaaacttaaaaggactaattttgaaattatgtcaaacaaaaaggatctaattgaaactttcgaaact 5505822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 5505692 - 5505800
Alignment:
Q  68 tttgaaacttaaatgactgacttgggaattctgtcaaa-ctaaaatgacctaattgaaactttcgaaacttaaaa-tactaaattgggagttatgtcaaa 165  Q
    ||||||||||||| |||| |||| | |||||||| ||| |||||| || ||| || ||||||| |||||||||||  ||||| || | | ||||||||||    
T  5505692 tttgaaacttaaaggactaacttagaaattctgttaaaactaaaaggatctatttaaaacttttgaaacttaaaaggactaattttgaaattatgtcaaa 5505791  T
Q  166 ctaaaagga 174  Q
    | |||||||    
T  5505792 caaaaagga 5505800  T

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Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 140
Target Start/End: Original strand, 54456844 - 54456940
Alignment:
Q  45 aattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaa 140  Q
    ||||||||| ||||||||||||| ||||| ||||||  || | | |||| | |||| |||||||||||  | ||||||||| ||||| |||||||||    
T  54456844 aattaaaaggacctatttgaaacttttgatacttaagggaataatttggaagttctatcaaactaaaagaatctaattgaagctttctaaacttaaa 54456940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 28705 - 28548
Alignment:
Q  19 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 117  Q
    |||||||||| ||||||||||||||||| ||||| |||||||||||||| ||||||  ||||| |||| ||||| ||||||||||||| ||||| |||||    
T  28705 caggggtaacagtgaaatagtttatcaactaaaatgacctatttgaaacttttgaattttaaaggactaacttgagaattctgtcaaattaaaaggacct 28606  T
Q  118 aattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    ||||||||||||| |||||||||  ||||| |||| | || ||||||| |||||||||    
T  28605 aattgaaactttcaaaacttaaaggactaacttggaaattctgtcaaattaaaaggac 28548  T

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Target: scaffold0070; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 116
Target Start/End: Complemental strand, 28619 - 28547
Alignment:
Q  45 aattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    ||||||||| ||||| ||||||| ||  ||||||||| |||| |||||| |||||||||||| ||||| ||||    
T  28619 aattaaaaggacctaattgaaactttcaaaacttaaaggactaacttggaaattctgtcaaattaaaaggacc 28547  T

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Target: scaffold0019 (Bit Score: 76; Significance: 4e-35; HSPs: 4)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 49 - 180
Target Start/End: Original strand, 124351 - 124482
Alignment:
Q  49 aaaagacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaa 148  Q
    |||||||||| ||||||| || |||||||||| |||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||  |||||     
T  124351 aaaagacctaattgaaactttcgaaacttaaaggactaacttggaaattctgtcaaactaaaaggacctaattgaaactttcgaaacttaaaggactaac 124450  T
Q  149 ttgggagttatgtcaaactaaaaggactaaaa 180  Q
    |||||| |||| |||||| |||||||| ||||    
T  124451 ttgggaattatatcaaacaaaaaggaccaaaa 124482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 124329 - 124417
Alignment:
Q  87 acttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||| |||| | || |||||||||||||||||    
T  124329 acttgggaattctgtcaaactaaaaagacctaattgaaactttcgaaacttaaaggactaacttggaaattctgtcaaactaaaaggac 124417  T

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Target: scaffold0019; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 124262 - 124142
Alignment:
Q  59 tttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagtta 158  Q
    |||||||| ||||||||||||| |||| | |||||||||||||||||||||||  ||||  |||||||||| ||||||||||  ||||| |||||| ||     
T  124262 tttgaaacttttgaaacttaaa-gactaaattgggaattctgtcaaactaaaagcacctgtttgaaacttttgaaacttaaaggactaacttgggaattt 124164  T
Q  159 tgtcaaactaaaaggactaaaa 180  Q
    ||||||||||||||||| ||||    
T  124163 tgtcaaactaaaaggaccaaaa 124142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 124208 - 124146
Alignment:
Q  54 acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    |||| |||||||| ||||||||||||| |||| ||||||||||| ||||||||||||| ||||    
T  124208 acctgtttgaaacttttgaaacttaaaggactaacttgggaattttgtcaaactaaaaggacc 124146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746 (Bit Score: 75; Significance: 2e-34; HSPs: 3)
Name: scaffold0746
Description:

Target: scaffold0746; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 498 - 620
Alignment:
Q  19 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 117  Q
    |||||||||| ||||||||||||||||| ||||| |||||||||||||| ||||||| ||||| |||| ||||| ||||||||||||| ||||| |||||    
T  498 caggggtaacagtgaaatagtttatcaactaaaatgacctatttgaaacttttgaaatttaaaggactaacttgagaattctgtcaaattaaaaggacct 597  T
Q  118 aattgaaactttcgaaacttaaa 140  Q
    ||||||||||||| |||||||||    
T  598 aattgaaactttcaaaacttaaa 620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 14 - 175
Target Start/End: Complemental strand, 186 - 25
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaat 112  Q
    |||| |||| ||||| ||||||||||||||||| ||||| ||| |||||||||| ||| |||||||||| ||| |||| ||||||| ||||||||||||     
T  186 gacaacaggagtaacagtgaaatagtttatcaactaaaatgacatatttgaaacttttcaaacttaaat-actaacttaggaattcggtcaaactaaaag 88  T
Q  113 gacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    ||  || || ||||||| ||||||| ||  ||||| ||| || ||||||||||||||||||||    
T  87 gatatatttaaaacttttgaaacttgaaggactaacttgagaattatgtcaaactaaaaggac 25  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 524 - 595
Alignment:
Q  104 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    ||||||||||||||| |||||||||| |||| |||||  ||||| ||| || || ||||||| |||||||||    
T  524 aactaaaatgacctatttgaaacttttgaaatttaaaggactaacttgagaattctgtcaaattaaaaggac 595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 56 - 193
Target Start/End: Original strand, 45204 - 45341
Alignment:
Q  56 ctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggag 155  Q
    ||||||||||| ||| |||||||||||||| | |||  |||| ||||||||||||| |||||||||||||||||  |||||||||| ||||| ||| ||     
T  45204 ctatttgaaacttttaaaacttaaatgactaatttgaaaattatgtcaaactaaaaggacctaattgaaacttttaaaacttaaaagactaacttgagaa 45303  T
Q  156 ttatgtcaaactaaaaggactaaaatgatttttgacct 193  Q
    ||||||||||| |||||||| ||| || | ||||||||    
T  45304 ttatgtcaaaccaaaaggaccaaagtggtatttgacct 45341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 175
Target Start/End: Original strand, 45181 - 45263
Alignment:
Q  93 gaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac 175  Q
    ||||||||||||| ||||| || ||| ||||||||||  |||||||||  ||||| |||  | ||||||||||||||||||||    
T  45181 gaattctgtcaaattaaaaggatctatttgaaacttttaaaacttaaatgactaatttgaaaattatgtcaaactaaaaggac 45263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 195
Target Start/End: Complemental strand, 9546 - 9377
Alignment:
Q  19 caggggtaacggtgaaatagtttatcaattaaaag-acctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacct 117  Q
    |||||||||| ||||||||||||||||| |||||| |||||||||||||         |||||  ||| ||||| ||||||| | ||||||||| |||||    
T  9546 caggggtaacagtgaaatagtttatcaactaaaaggacctatttgaaac---------ttaaagaactaacttgagaattctattaaactaaaaggacct 9456  T
Q  118 aattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggac-taaaatgatttttgacctaa 195  Q
    ||||||||||| |||||||||||  ||||| ||  || || |||||||||||||||||  |||||||| ||||||||||    
T  9455 aattgaaacttccgaaacttaaatgactaacttaagaattctgtcaaactaaaaggacgaaaaatgatatttgacctaa 9377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 73 - 175
Target Start/End: Original strand, 9891 - 9993
Alignment:
Q  73 aacttaaatgactgacttgggaattctgtcaaactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaag 172  Q
    |||| ||| |||| ||||||||||| ||||||||||||| || |||||||||||||||||||||||||  ||||| ||| || || ||||||||||||||    
T  9891 aactaaaaggactaacttgggaattatgtcaaactaaaaggaactaattgaaactttcgaaacttaaagaactaacttgagaattctgtcaaactaaaag 9990  T
Q  173 gac 175  Q
    |||    
T  9991 gac 9993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 47; Significance: 8e-18; HSPs: 3)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 16274 - 16176
Alignment:
Q  19 caggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaatgacc 116  Q
    |||||||||||||||||||||||||||| ||||| ||||||||| |||| ||| ||||||||| |||| | |||| |||| | ||||||||||| ||||    
T  16274 caggggtaacggtgaaatagtttatcaactaaaatgacctatttaaaactttttaaacttaaaggactaatttggaaattttatcaaactaaaaggacc 16176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 111
Target Start/End: Original strand, 16565 - 16663
Alignment:
Q  14 gacatcaggggtaacggtgaaatagtttatcaattaaaa-gacctatttgaaacatttgaaacttaaatgactgacttgggaattctgtcaaactaaaa 111  Q
    |||| ||||| |||| ||||||||||||||||| ||||| ||| ||||| |||| ||| ||||||||| || | |||||| |||| | |||||| ||||    
T  16565 gacaacagggataactgtgaaatagtttatcaactaaaatgacttatttaaaactttttaaacttaaaggattaacttggaaattttatcaaacaaaaa 16663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 180
Target Start/End: Complemental strand, 16248 - 16172
Alignment:
Q  104 aactaaaatgacctaattgaaactttcgaaacttaaaatactaaattgggagttatgtcaaactaaaaggactaaaa 180  Q
    ||||||||||||||| || |||||||  |||||||||  ||||| |||| | || | ||||||||||||||| ||||    
T  16248 aactaaaatgacctatttaaaactttttaaacttaaaggactaatttggaaattttatcaaactaaaaggaccaaaa 16172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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