View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7224_high_1 (Length: 954)
Name: NF7224_high_1
Description: NF7224
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7224_high_1 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 891; Significance: 0; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 891; E-Value: 0
Query Start/End: Original strand, 10 - 940
Target Start/End: Complemental strand, 40579848 - 40578918
Alignment:
| Q |
10 |
acatcactcttctctgttaattggcttgtgtggaagtattctgggtcaagataccccaatgttccctgcactagagtgtttatttgactatgatcaagag |
109 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
40579848 |
acatcactcttctctgttaattggcttgtgtggaagtattctgggtcaagataccctaatgttccttgtactagagtgtttatttgactatgatcaagag |
40579749 |
T |
|
| Q |
110 |
gaacaatccttgaagctccaaagtcagaaacctttgcagtgagattatgatctaggagtatatttgaagatttcacatctctatgtatgattggtgtaga |
209 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40579748 |
gaacaatccttgaagctccaaagtcagaaacctttgcagtgagattttgatctaggagtatatttgaagatttcacatctctatgtatgattggtgtaga |
40579649 |
T |
|
| Q |
210 |
agcagcagagtgtaaatatgccagcacaccagcagcttcctttgctattctcaatcttgttttccatgtaagcttcatagattgggtttcatcatgaata |
309 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
40579648 |
agcagcagagtgtaaatatgccagcacaccagcagcttcctttgctattcttaatcttgttttccatgtaagcttcatagattgggtttcatcatgaaga |
40579549 |
T |
|
| Q |
310 |
tgctcataaacagtaccattgggaataaattcgtaaacaagtaacggaacttctgtctctaaacaacaacccaaaatctttaccacatttctatgattga |
409 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40579548 |
tgctcataaacagtaccattgggaataaattcgtaaacaagtaacggaacttctgtctctaaacaacaacccaaaatctttaccacatttctatgattga |
40579449 |
T |
|
| Q |
410 |
tttgggaaagaatgaccacttcattgatgaacgactcaatctggttcgggtcacttattttggacttttttattgctacaattctgttatcttgtaaaac |
509 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40579448 |
tttgggaaagaatgaccacttcattgatgaacgactcaatctggttcgggtcacttattttggacttttttattgctacaattctgttatcttgtaaaac |
40579349 |
T |
|
| Q |
510 |
tcctttgtaaacaattccctgaccaccttggcctagtatcttgccttcatcgaagttgttggttgcttcttttagctcctcaactttgaagactttagct |
609 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
40579348 |
tcctttgtaaacaattccctgaccaccttggcctaggatcgtgccttcatcgaagttgttggttgcatcttttagctcctcaactttgaagactttagct |
40579249 |
T |
|
| Q |
610 |
atttcagttgaacctccatgcctccatatctgttgttgtaacagtatgccaccattttgttggaaaaaatgttctttaagtttaatgaactttcttttct |
709 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40579248 |
atttcagttgaacctccatgcctccatatctgttgttgtaacagtatgccaccattttgttggaaaaaatgttctttaagtttaatgaactttcttttct |
40579149 |
T |
|
| Q |
710 |
tgaatgccaaatatgcataaaagcttccaatcagcagtgctacgaggcttacactgacacctgaacataaagaaatggaaacataattattttcttgttg |
809 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40579148 |
tgaatgccaaatatgcataaaagcttccaatcagcagtgctacgaggcttacactgacacctgaacataaagaaatggaaacataattattttcttgttg |
40579049 |
T |
|
| Q |
810 |
ttctgctttgttgatgtttcaagtcaacttcatgtatcctaataaattagtcaaaatctcaaaatgctactctggtcttgaaggaccgagtacctttggt |
909 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
40579048 |
ttctgctttgttgatgtttcaagtcaacttcatgtatcctaataaattagtcaaaatctcaaaatgctactctggtcttgaaggactgagtacctttggt |
40578949 |
T |
|
| Q |
910 |
aaatgaatttcagttcagagcaacaattttc |
940 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
40578948 |
aaatgaatttcagttcagagcaacaattttc |
40578918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 699; E-Value: 0
Query Start/End: Original strand, 10 - 900
Target Start/End: Complemental strand, 40573391 - 40572501
Alignment:
| Q |
10 |
acatcactcttctctgttaattggcttgtgtggaagtattctgggtcaagataccccaatgttccctgcactagagtgtttatttgactatgatcaagag |
109 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
40573391 |
acatcactcttctctgttaattggcttgtgtggaagtattctgggtcaagataccctaatgttccttgtactagagtgtttatttgactatgatcaagag |
40573292 |
T |
|
| Q |
110 |
gaacaatccttgaagctccaaagtcagaaacctttgcagtgagattatgatctaggagtatatttgaagatttcacatctctatgtatgattggtgtaga |
209 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
40573291 |
gaacaatccttgaagctccaaagtcagaaacctttgcagtgagattttgatctaggagtatatttgaagatttcacatctctatgtatgattggtgtcga |
40573192 |
T |
|
| Q |
210 |
agcagcagagtgtaaatatgccagcacaccagcagcttcctttgctattctcaatcttgttttccatgtaagcttcatagattgggtttcatcatgaata |
309 |
Q |
| |
|
||||||||||||||| |||||||| ||||| || ||| |||| ||||| || |||||||||||||||||||| |||||||||||||| ||||||| | |
|
|
| T |
40573191 |
agcagcagagtgtaagtatgccaggacaccggctatttcttttgaaattcttaaccttgttttccatgtaagctttatagattgggtttcgtcatgaaga |
40573092 |
T |
|
| Q |
310 |
tgctcataaacagtaccattgggaataaattcgtaaacaagtaacggaacttctgtctctaaacaacaacccaaaatctttaccacatttctatgattga |
409 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || |||| ||| ||||||||||||||||||||||| ||||| |||||||||||||||||||| |||| |
|
|
| T |
40573091 |
tgctcataaacagtaccattgggaataaattcatacacaactaagggaacttctgtctctaaacaacagcccaagatctttaccacatttctatggttga |
40572992 |
T |
|
| Q |
410 |
tttgggaaagaatgaccacttcattgatgaacgactcaatctggttcgggtcacttattttggacttttttattgctacaattctgttatcttgtaaaac |
509 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
40572991 |
tttgggaaagtacgaccacttcattgatgaacgactcaacctggttcgggtcacttattttggacttttttattgctacaattctgttattttgtaaaac |
40572892 |
T |
|
| Q |
510 |
tcctttgtaaacaattccctgaccaccttggcctagtatcttgccttcatcgaagttgttggttgcttcttttagctcctcaactttgaagactttagct |
609 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40572891 |
tcctttgtaaacaattccttgaccaccttggcctaggatcttgccttgatcgaagttgttggttgcttcttttagctcctcaactttgaagactttagct |
40572792 |
T |
|
| Q |
610 |
atttcagttgaacctccatgcctccatatctgttgttgtaacagtatgccaccattttgttggaaaaaatgttctttaagtttaatgaactttcttttct |
709 |
Q |
| |
|
||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
40572791 |
atttcagttgaacctccgtgcctccctatctgttgttgtaacagtaagccaccattttgttgaaaaaaatgttcttgaagtttaatgaactttcttttct |
40572692 |
T |
|
| Q |
710 |
tgaatgccaaatatgcataaaagcttccaatcagcagtgctacgaggcttacactgacacctgaacataaagaaatggaaacataattattttcttgttg |
809 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||| |||||||||||| |
|
|
| T |
40572691 |
tgaatgccaaatatgcataaaagcttccaatcagcagtgctacgaggcttgcactgacacctgataataaacaaatggaaacataatcattttcttgttg |
40572592 |
T |
|
| Q |
810 |
ttctgctttgttgatgtttcaagtcaacttcatgtatcctaataaattagtcaaaatctcaaaatgctactctggtcttgaaggaccgagt |
900 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
40572591 |
ctctgctttgttgatgtttcaagtcaacttcatgtatccaaagaaattagtcaaaatctcaaaatgctactatggtcttgaaggactgagt |
40572501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 470; E-Value: 0
Query Start/End: Original strand, 10 - 791
Target Start/End: Complemental strand, 40568790 - 40568009
Alignment:
| Q |
10 |
acatcactcttctctgttaattggcttgtgtggaagtattctgggtcaagataccccaatgttccctgcactagagtgtttatttgactatgatcaagag |
109 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||| || || ||||||||| |||| |||||||||||||||| |
|
|
| T |
40568790 |
acatcactcttctctgttaactggcttgtgaggaagtattctgggtcaagataccctaatgtcccttgtactagagtggttatctgactatgatcaagag |
40568691 |
T |
|
| Q |
110 |
gaacaatccttgaagctccaaagtcagaaacctttgcagtgagattatgatctaggagtatatttgaagatttcacatctctatgtatgattggtgtaga |
209 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| || |
|
|
| T |
40568690 |
gaacaatccttgaagctccaaagtcagaaaccttcgcagtgagattgtgatctaggagtatatttgtagatttcacatctctatgtatgattggtgttga |
40568591 |
T |
|
| Q |
210 |
agcagcagagtgtaaatatgccagcacaccagcagcttcctttgctattctcaatcttgttttccatgtaagcttcatagattgggtttcatcatgaata |
309 |
Q |
| |
|
||| ||||||||||| |||||||| || ||||||| ||| ||||||||||| ||||| |||||||||||||| || |||| |||| ||| |||||||| | |
|
|
| T |
40568590 |
agccgcagagtgtaagtatgccaggactccagcagtttcttttgctattcttaatctggttttccatgtaagttttatagtttggttttgatcatgaaga |
40568491 |
T |
|
| Q |
310 |
tgctcataaacagtaccattgggaataaattcgtaaacaagtaacggaacttctgtctctaaacaacaacccaaaatctttaccacatttctatgattga |
409 |
Q |
| |
|
||||| |||||||| || |||| ||| ||||| |||||||| || ||||||||||||||||||||||||||||| | |||||||||||||||||| |||| |
|
|
| T |
40568490 |
tgctcgtaaacagtgccgttggaaatgaattcataaacaagcaagggaacttctgtctctaaacaacaacccaagagctttaccacatttctatggttga |
40568391 |
T |
|
| Q |
410 |
tttgggaaagaatgaccacttcattgatgaacgactcaatctggttcgggtcacttattttggacttttttattgctacaattctgttatcttgtaaaac |
509 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |||||||||||| |||||||| | ||||||||||||||||||||||||||| |||| ||||||||| |
|
|
| T |
40568390 |
tttgggaaagaacgaccacttcattgatgaacggctcaatctggtttgggtcactgactttggacttttttattgctacaattcttttattttgtaaaac |
40568291 |
T |
|
| Q |
510 |
tcctttgtaaacaattccctgaccaccttggcctagtatcttgccttcatcgaagttgttggttgcttcttttagctcctcaactttgaagactttagct |
609 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| ||||| |||||||| ||||| ||||||||||| |||||||||||||| |||| ||||||||| |
|
|
| T |
40568290 |
tcctttgtaaacagttccctgaccaccttggcctaggatcttaccttcatcaaagttattggttgcttcatttagctcctcaacagtgaacactttagct |
40568191 |
T |
|
| Q |
610 |
atttcagttgaacctccatgcctccatatctgttgttgtaacagtatgccaccattttgttggaaaaaatgttctttaagtttaatgaactttcttttct |
709 |
Q |
| |
|
|||||||||| ||||||||||| |||||||||||||||||||| |||||| |||||||| ||||| |||||||||||| ||||| ||||||||||| |
|
|
| T |
40568190 |
gtttcagttgaccctccatgcctaactatctgttgttgtaacagtaagccaccgttttgttgaaaaaattgttctttaagtcgaatgagctttcttttct |
40568091 |
T |
|
| Q |
710 |
tgaatgccaaatatgcataaaagcttccaatcagcagtgctacgaggcttacactgacacctgaacataaagaaatggaaac |
791 |
Q |
| |
|
| |||||| |||| ||||||||||| || | ||| ||| || ||||||||| |||||||||| ||||||| |||||||||| |
|
|
| T |
40568090 |
tcaatgcccaatacgcataaaagctacccaccagtagtaatatgaggcttacgctgacacctggacataaacaaatggaaac |
40568009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 423; E-Value: 0
Query Start/End: Original strand, 10 - 880
Target Start/End: Complemental strand, 40602346 - 40601477
Alignment:
| Q |
10 |
acatcactcttctctgttaattggcttgtgtggaagtattctgggtcaagataccccaatgttccctgcactagagtgtttatttgactatgatcaagag |
109 |
Q |
| |
|
|||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||| | |||||||||| |
|
|
| T |
40602346 |
acatcactcttctcagttaacatgcttgtctggaagtattctgggtcaagataccccaatgtcccctgcacaagagtgtttatctgagtgtgatcaagag |
40602247 |
T |
|
| Q |
110 |
gaacaatccttgaagctccaaagtcagaaacctttgcagtgagattatgatctaggagtatatttgaagatttcacatctctatgtatgattggtgtaga |
209 |
Q |
| |
|
|||||||| ||||||||||||| ||||||||||||||| ||||||| ||||||||| || |||| |||||| | ||||||||| |||||||| ||||| |
|
|
| T |
40602246 |
gaacaatctttgaagctccaaaatcagaaacctttgcaatgagattgccatctaggaggatgtttgtagattttatatctctatgaatgattggagtaga |
40602147 |
T |
|
| Q |
210 |
agcagcagagtgtaaatatgccagcacaccagcagcttcctttgctattctcaatcttgttttccatgtaagcttcatagattgggtttcatcatgaata |
309 |
Q |
| |
|
||||||||| ||||| ||||||| || ||||||| ||| |||||||||| |||||||| |||||||||||||| ||||| ||| ||| |||||||| | |
|
|
| T |
40602146 |
agcagcagaatgtaagtatgccaagactccagcagtttctgttgctattcttaatcttgtgttccatgtaagctttatagactggttttgatcatgaaga |
40602047 |
T |
|
| Q |
310 |
tgctcataaacagtaccattgggaataaattcgtaaacaagtaacggaacttctgtctctaaacaacaacccaaaatctttaccacatttctatgattga |
409 |
Q |
| |
|
|| ||||||||||||||||||| |||||| || |||||||| || ||||||||||| |||||||| |||||||||| || ||||||||||||||| |||| |
|
|
| T |
40602046 |
tgatcataaacagtaccattggaaataaactcataaacaagcaatggaacttctgtttctaaacagcaacccaaaagctgtaccacatttctatggttga |
40601947 |
T |
|
| Q |
410 |
tttgggaaagaatgaccacttcattgatgaacgactcaatctggttcgggtcacttattttggacttttttattgctacaattctgttatcttgtaaaac |
509 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||| |||||||||||| ||||||| ||| |||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
40601946 |
tttgagaaagaatgatcacttcattgatgaacggctcaatctggttttggtcactgattgtggacttttttattgcgacaattctgttatcttgtaaaac |
40601847 |
T |
|
| Q |
510 |
tcctttgtaaacaattccctgaccaccttggcctagtatcttgccttcatcgaagttgttggttgcttcttttagctcctcaactttgaagactttagct |
609 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||| ||| ||| ||||| ||||||||||||||||| ||||||||||||| |||||||||||| | |
|
|
| T |
40601846 |
tcctttgtaaactgttccctgaccaccttggcctaggatcctgctttcattgaagttgttggttgctttatttagctcctcaatagtgaagactttaggt |
40601747 |
T |
|
| Q |
610 |
atttcagttgaacctccatgcctccatatctgttgttgtaacagtatgccaccattttgttggaaaaaatgttctttaagtttaatgaactttcttttct |
709 |
Q |
| |
|
|| | | ||| ||||||||| | ||| |||||||||||||||| ||||| |||||||| |||||||||||||||||||||| | ||||||||| |
|
|
| T |
40601746 |
gttccggctgatcctccatgctttgctatttgttgttgtaacagtaaaccaccgttttgttgaaaaaaatgttctttaagtttaacaagacttcttttct |
40601647 |
T |
|
| Q |
710 |
tgaatgccaaatatgcataaaagcttccaatcagcagtgctacgaggcttacactgacacctgaacataaagaaatggaaacataattattttcttgttg |
809 |
Q |
| |
|
| ||||| ||||||||||| | |||||| | ||| ||||||||||||| ||| | |||||||| ||||||| ||||||||||||||| | |||||||||| |
|
|
| T |
40601646 |
tcaatgctaaatatgcatacatgcttcctaccagtagtgctacgaggcctacgcagacacctgtacataaa-aaatggaaacataatcactttcttgttg |
40601548 |
T |
|
| Q |
810 |
ttctgctttgttgatgtttcaagtcaacttcatgtatcctaataaattagtcaaaatctcaaaatgctact |
880 |
Q |
| |
|
|| |||||||||||||||||||||||| ||||||||| | || | |||||| || ||||||||||| |||| |
|
|
| T |
40601547 |
ttgtgctttgttgatgtttcaagtcaaattcatgtattcaaagacattagttaagatctcaaaatgttact |
40601477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 9 - 826
Target Start/End: Complemental strand, 40591697 - 40590881
Alignment:
| Q |
9 |
gacatcactcttctctgttaattggcttgtgtggaagtattctgggtcaagataccccaatgttccctgcactagagtgtttatttgactatgatcaaga |
108 |
Q |
| |
|
||||||||||||||| ||||| ||| || || |||||||||||||| |||||||||||||| || |||||||||||| |||| |||| ||||||||| |
|
|
| T |
40591697 |
gacatcactcttctccgttaacacgctagtttgcaagtattctgggtcgagataccccaatgtcccttgcactagagtggttatcagactgtgatcaaga |
40591598 |
T |
|
| Q |
109 |
ggaacaatccttgaagctccaaagtcagaaacctttgcagtgagattatgatctaggagtatatttgaagatttcacatctctatgtatgattggtgtag |
208 |
Q |
| |
|
||||||||| |||| |||||||| ||||||||||||||| ||||||| ||| ||||| || |||| |||||| | ||||||||| |||||||| |||| |
|
|
| T |
40591597 |
ggaacaatctttgatgctccaaaatcagaaacctttgcaatgagattgacatcgaggaggatgtttgtagattttatatctctatgaatgattggagtag |
40591498 |
T |
|
| Q |
209 |
aagcagcagagtgtaaatatgccagcacaccagcagcttcctttgctattctcaatcttgttttccatgtaagcttcatagattgggtttcatcatgaat |
308 |
Q |
| |
|
|||||||||| ||||| |||||||| || ||||||| ||| ||||||||||| || |||||||||||||| ||||| ||||||||| ||| |||||||| |
|
|
| T |
40591497 |
aagcagcagaatgtaagtatgccaggactccagcagtttcttttgctattcttaaccttgttttccatgtcagctttatagattggttttgatcatgaag |
40591398 |
T |
|
| Q |
309 |
atgctcataaacagtaccattgggaataaattcgtaaacaagtaacggaacttctgtctctaaacaacaacccaaaatctttaccacatttctatgattg |
408 |
Q |
| |
|
||| || |||||||| ||||||||||| ||||| |||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||| ||| |
|
|
| T |
40591397 |
atgatcgtaaacagttccattgggaatgaattcataaacaagcaatggaacttctgtctctaaacaacaacccaaaattcttaccacatttctatggttg |
40591298 |
T |
|
| Q |
409 |
atttgggaaagaatgaccacttcattgatgaacgactcaatctggttcgggtcacttattttggacttttttattgctacaattctgttatcttgtaaaa |
508 |
Q |
| |
|
||||| ||||||| |||||||||||||||||| | |||||||||||| ||||| | |||||||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
40591297 |
atttgagaaagaacgaccacttcattgatgaatggctcaatctggttttggtcattgattttggacttttttattgctacaatacttttatcttgtaaaa |
40591198 |
T |
|
| Q |
509 |
ctcctttgtaaacaattccctgaccaccttggcctagtatcttgccttcatcgaagttgttggttgcttcttttagctcctcaactttgaagactttagc |
608 |
Q |
| |
|
||||||||||||| |||||||| ||||| |||||| ||||| |||||||| || ||||| |||||||| ||||||||||||| |||| ||| | | |
|
|
| T |
40591197 |
ctcctttgtaaactgttccctgagaacctttgcctagaatctttccttcatcaaaattgttagttgcttcatttagctcctcaatagtgaacactctggg |
40591098 |
T |
|
| Q |
609 |
tatttcagttgaacctccatgcctccatatctgttgttgtaacagtatgccaccattttgttggaaaaaatgttctttaagtttaatgaactttcttttc |
708 |
Q |
| |
|
| |||| ||||| | | ||||||| | ||||| |||||| ||||||| ||||||||||||||| ||||| ||||||||||||||| | |||||||| |
|
|
| T |
40591097 |
tgtttcggttgacctttcatgccttcctatcttttgttgcaacagtaagccaccattttgttgaaaaaattgttctttaagtttatcaagctttctttgt |
40590998 |
T |
|
| Q |
709 |
ttgaatgccaaatatgcataaaagcttccaatcagcagtgctacgaggcttacactgacacctgaacataaagaaatggaaacataattattttcttgtt |
808 |
Q |
| |
|
|| ||||||||||| |||||| |||||||| ||| ||||||||||||| ||| | ||||||| ||||||| ||||||||||||||| | |||| || | |
|
|
| T |
40590997 |
ttcaatgccaaataagcataattgcttccaaccagtagtgctacgaggcctacgcagacacctagacataaa-aaatggaaacataatcactttcatgct |
40590899 |
T |
|
| Q |
809 |
gttctgctttgttgatgt |
826 |
Q |
| |
|
| ||| ||||||||||| |
|
|
| T |
40590898 |
gctctaatttgttgatgt |
40590881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 307; E-Value: 1e-172
Query Start/End: Original strand, 166 - 796
Target Start/End: Complemental strand, 40598022 - 40597392
Alignment:
| Q |
166 |
agtatatttgaagatttcacatctctatgtatgattggtgtagaagcagcagagtgtaaatatgccagcacaccagcagcttcctttgctattctcaatc |
265 |
Q |
| |
|
|||||||||| |||||| ||||||||||||||||||||||| ||||||||||| ||||| |||||||| || ||||||| ||| |||||||||||||||| |
|
|
| T |
40598022 |
agtatatttgtagatttgacatctctatgtatgattggtgtggaagcagcagaatgtaagtatgccaggactccagcagtttcttttgctattctcaatc |
40597923 |
T |
|
| Q |
266 |
ttgttttccatgtaagcttcatagattgggtttcatcatgaatatgctcataaacagtaccattgggaataaattcgtaaacaagtaacggaacttctgt |
365 |
Q |
| |
|
||||||||||||||||||| |||||| | ||| |||||||||||||||||||| |||||||||||||||||||| |||||||| || ||||||||||| |
|
|
| T |
40597922 |
ttgttttccatgtaagctttctagattcgttttggtcatgaatatgctcataaactgtaccattgggaataaattcataaacaagcaatggaacttctgt |
40597823 |
T |
|
| Q |
366 |
ctctaaacaacaacccaaaatctttaccacatttctatgattgatttgggaaagaatgaccacttcattgatgaacgactcaatctggttcgggtcactt |
465 |
Q |
| |
|
|||||||||||||| | || ||||||||||| ||||| |||||||||||||| | | ||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
40597822 |
ttctaaacaacaacctacaagttttaccacattcctatggttgatttgggaaagcacggccacttcattgatgaacgactcaatctggtttgggtcactg |
40597723 |
T |
|
| Q |
466 |
attttggacttttttattgctacaattctgttatcttgtaaaactcctttgtaaacaattccctgaccaccttggcctagtatcttgccttcatcgaagt |
565 |
Q |
| |
|
||||| ||||| |||||||||||||| || ||||||| |||||||||||||||||| |||||||||||||||||||||| || |||||||||| ||||| |
|
|
| T |
40597722 |
atttttgacttctttattgctacaatacttttatcttctaaaactcctttgtaaactgttccctgaccaccttggcctaggattttgccttcattgaagt |
40597623 |
T |
|
| Q |
566 |
tgttggttgcttcttttagctcctcaactttgaagactttagctatttcagttgaacctccatgcctccatatctgttgttgtaacagtatgccaccatt |
665 |
Q |
| |
|
|| ||||||| || |||| |||||||| |||||| |||| | ||| || || ||||||||| || ||| ||||||| |||||||| |||||| || |
|
|
| T |
40597622 |
tgctggttgcctcatttaactcctcaatagtgaagattttaagtgttttagacgaccctccatgcttcactatttgttgttctaacagtaagccaccgtt |
40597523 |
T |
|
| Q |
666 |
ttgttggaaaaaatgttctttaagtttaatgaactttcttttcttgaatgccaaatatgcataaaagcttccaatcagcagtgctacgaggcttacactg |
765 |
Q |
| |
|
||| | ||||| | ||||||||||||||||| |||| ||||||| || ||| |||| |||||||||||||| | ||| ||| |||||||||||||||| |
|
|
| T |
40597522 |
ttgcttaaaaaactcttctttaagtttaatgatctttattttcttcaaagcccaataagcataaaagcttcccaccagtagtcctacgaggcttacacta |
40597423 |
T |
|
| Q |
766 |
acacctgaacataaagaaatggaaacataat |
796 |
Q |
| |
|
||||||| ||||||| ||||||||||||||| |
|
|
| T |
40597422 |
acacctggacataaacaaatggaaacataat |
40597392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 13 - 194
Target Start/End: Complemental strand, 40598295 - 40598114
Alignment:
| Q |
13 |
tcactcttctctgttaattggcttgtgtggaagtattctgggtcaagataccccaatgttccctgcactagagtgtttatttgactatgatcaagaggaa |
112 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| || |||||||||||||| | ||| || |||||||| ||| |||| ||| | | ||||||||||| |
|
|
| T |
40598295 |
tcactcttctctgttaactggcttgtgtggaagtactcagggtcaagatacccgagtgtcccttgcactagggtggttatctgagttttatcaagaggaa |
40598196 |
T |
|
| Q |
113 |
caatccttgaagctccaaagtcagaaacctttgcagtgagattatgatctaggagtatatttgaagatttcacatctctatg |
194 |
Q |
| |
|
| ||| |||||||||||||||||| ||||||||||||||||| | |||||| |||||||||| |||||| | ||||||||| |
|
|
| T |
40598195 |
cgatctttgaagctccaaagtcagccacctttgcagtgagattttcatctagtagtatatttgtagatttgatatctctatg |
40598114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 103 - 211
Target Start/End: Complemental strand, 40588207 - 40588102
Alignment:
| Q |
103 |
tcaagaggaacaatccttgaagctccaaagtcagaaacctttgcagtgagattatgatctaggagtatatttgaagatttcacatctctatgtatgattg |
202 |
Q |
| |
|
||||||||||||||||| ||||||| ||| || ||| ||||||||||||||| ||||| || || |||||||| ||||||||||||||||||||||| |
|
|
| T |
40588207 |
tcaagaggaacaatcctagaagctctaaaatcccaaaactttgcagtgagattgtgatcaag---tacatttgaagttttcacatctctatgtatgattg |
40588111 |
T |
|
| Q |
203 |
gtgtagaag |
211 |
Q |
| |
|
|||| |||| |
|
|
| T |
40588110 |
gtgttgaag |
40588102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 436; Significance: 0; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 436; E-Value: 0
Query Start/End: Original strand, 13 - 780
Target Start/End: Original strand, 2014949 - 2015716
Alignment:
| Q |
13 |
tcactcttctctgttaattggcttgtgtggaagtattctgggtcaagataccccaatgttccctgcactagagtgtttatttgactatgatcaagaggaa |
112 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| ||||| |||||||| |||||| |||| || || ||||| || ||||| |||||||| |||||||||| |
|
|
| T |
2014949 |
tcactcttctctgtcaattggcttgtgtggaaatattccgggtcaaggtacccccatgtcccttgtactagggtttttatctgactatggtcaagaggaa |
2015048 |
T |
|
| Q |
113 |
caatccttgaagctccaaagtcagaaacctttgcagtgagattatgatctaggagtatatttgaagatttcacatctctatgtatgattggtgtagaagc |
212 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
2015049 |
caatcctagaagctccaaagtcagaaacctttgccgtgagattgcgatctaggagtatgtttgaagatttcacatctctatgtatgattggtgtagatgc |
2015148 |
T |
|
| Q |
213 |
agcagagtgtaaatatgccagcacaccagcagcttcctttgctattctcaatcttgttttccatgtaagcttcatagattgggtttcatcatgaatatgc |
312 |
Q |
| |
|
|||||| || || ||||| || || ||||||| ||| ||||||||||||||||||||||||||||||||||| | || | | ||| |||||||| |||| |
|
|
| T |
2015149 |
agcagaatgcaagtatgctaggactccagcagtttcttttgctattctcaatcttgttttccatgtaagctttaaagttggattttgatcatgaagatgc |
2015248 |
T |
|
| Q |
313 |
tcataaacagtaccattgggaataaattcgtaaacaagtaacggaacttctgtctctaaacaacaacccaaaatctttaccacatttctatgattgattt |
412 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||| |
|
|
| T |
2015249 |
tcataaacagtaccattgggaatgaattcgtaaacaagtaaaggaacttctgtctctaaacaacaacccaagagctttaccacatttctatggttgattt |
2015348 |
T |
|
| Q |
413 |
gggaaagaatgaccacttcattgatgaacgactcaatctggttcgggtcacttattttggacttttttattgctacaattctgttatcttgtaaaactcc |
512 |
Q |
| |
|
| ||||| | | ||||||||||||||||| |||||||||||| |||||||| ||||||||||| || || ||||||||||| ||||||||||||||||| |
|
|
| T |
2015349 |
gtgaaagcacaatcacttcattgatgaacggctcaatctggttagggtcactgattttggacttcttaatagctacaattcttttatcttgtaaaactcc |
2015448 |
T |
|
| Q |
513 |
tttgtaaacaattccctgaccaccttggcctagtatcttgccttcatcgaagttgttggttgcttcttttagctcctcaactttgaagactttagctatt |
612 |
Q |
| |
|
||||||||| |||||||||| ||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||| | || |
|
|
| T |
2015449 |
tttgtaaactgttccctgacctccttggcctagaatcttgccttcgtcgaagttgttggttgcttcatttagctcctcaacagtgaagactttagttgtt |
2015548 |
T |
|
| Q |
613 |
tcagttgaacctccatgcctccatatctgttgttgtaacagtatgccaccattttgttggaaaaaatgttctttaagtttaatgaactttcttttcttga |
712 |
Q |
| |
|
|||||||| ||||| |||||| || | |||||||| |||| ||||||||||||||| ||||| |||||||| |||||||||| |||||||||||| | |
|
|
| T |
2015549 |
tcagttgaccctccgtgcctcactacttcttgttgtagtagtaagccaccattttgttgaaaaaattgttctttcagtttaatgagctttcttttcttta |
2015648 |
T |
|
| Q |
713 |
atgccaaatatgcataaaagcttccaatcagcagtgctacgaggcttacactgacacctgaacataaa |
780 |
Q |
| |
|
|||||||||| |||||||||||||||| ||| |||||||| ||||| | |||||||||||||||||| |
|
|
| T |
2015649 |
atgccaaatacgcataaaagcttccaaccagtagtgctacaaggctcatgctgacacctgaacataaa |
2015716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 323 - 422
Target Start/End: Complemental strand, 11845189 - 11845090
Alignment:
| Q |
323 |
taccattgggaataaattcgtaaacaagtaacggaacttctgtctctaaacaacaacccaaaatctttaccacatttctatgattgatttgggaaagaat |
422 |
Q |
| |
|
||||||| ||||| ||||| |||||||| || |||| ||||||||| |||||||| || || ||||| ||||||||||||| |||||||| |||||||| |
|
|
| T |
11845189 |
taccattaggaatgaattcataaacaagcaatggaatttctgtctccaaacaacatcctaatatcttgaccacatttctattgttgatttgtgaaagaat |
11845090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 324 - 422
Target Start/End: Complemental strand, 11849917 - 11849819
Alignment:
| Q |
324 |
accattgggaataaattcgtaaacaagtaacggaacttctgtctctaaacaacaacccaaaatctttaccacatttctatgattgatttgggaaagaat |
422 |
Q |
| |
|
|||||| ||||| ||||| |||||||| || |||| ||||||||| |||||||| || || ||||| ||||||||||||| |||||||| |||||||| |
|
|
| T |
11849917 |
accattaggaatgaattcataaacaagcaatggaatttctgtctccaaacaacatcctaatatcttgaccacatttctattgttgatttgtgaaagaat |
11849819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 140; Significance: 8e-73; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 140; E-Value: 8e-73
Query Start/End: Original strand, 33 - 399
Target Start/End: Original strand, 13765421 - 13765788
Alignment:
| Q |
33 |
gcttgtgtggaagtattctgggtcaagataccccaatgttccctgcactagagtgtttatttgactatgatcaagaggaacaatccttgaagctccaaag |
132 |
Q |
| |
|
|||||| || |||||||| |||||||||||||||||||| ||||||||||||| |||| | ||||||||||||||||| ||| ||||| || | ||| |
|
|
| T |
13765421 |
gcttgtttgcaagtattcagggtcaagataccccaatgtcatctgcactagagtggttatctaactatgatcaagaggaataattattgaatcttcgaag |
13765520 |
T |
|
| Q |
133 |
tcagaaaccttt-gcagtgagattatgatctaggagtatatttgaagatttcacatctctatgtatgattggtgtagaagcagcagagtgtaaatatgcc |
231 |
Q |
| |
|
||| |||||||| | ||||||| | ||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||| | | || | | | |
|
|
| T |
13765521 |
tcaaaaaccttttgtagtgagactgtgatctaggagtatatttgtagagttcacatctatatgtatgattggtgtagaagcagtataacacaagttcgtc |
13765620 |
T |
|
| Q |
232 |
agcacaccagcagcttcctttgctattctcaatcttgttttccatgtaagcttcatagattgggtttcatcatgaatatgctcataaacagtaccattgg |
331 |
Q |
| |
|
|| || ||| || |||| || ||||||||||||||||||||||||||||| | | ||||||| ||| ||||| ||||||| |||||||| || | || | |
|
|
| T |
13765621 |
aggactccatcaacttctatttctattctcaatcttgttttccatgtaagcattaaagattggctttgatcattaatatgcgcataaacaatatcgttag |
13765720 |
T |
|
| Q |
332 |
gaataaattcgtaaacaagtaacggaacttctgtctctaaacaacaacccaaaatctttaccacattt |
399 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||||||||||||||| ||||| |||||||||||| |
|
|
| T |
13765721 |
gaataaattcgtaaagaagtaagggaacttctgtctctaaacaacaactcaaaaaatttaccacattt |
13765788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 254 - 435
Target Start/End: Original strand, 14153407 - 14153584
Alignment:
| Q |
254 |
ctattctcaatcttgttttccatgtaagcttcatagattgggtttcatcatgaatatgctcataaacagtaccattgggaataaattcgtaaacaagtaa |
353 |
Q |
| |
|
|||||| |||||||||||||||||||||||| | ||||||| ||| |||||||| ||| | ||||||| ||||||| | |||||||||||||||||| |
|
|
| T |
14153407 |
ctattcacaatcttgttttccatgtaagctttaaagattggttttgatcatgaagatgataataaacaataccatt-gcaataaattcgtaaacaag--- |
14153502 |
T |
|
| Q |
354 |
cggaacttctgtctc-taaacaacaacccaaaatctttaccacatttctatgattgatttgggaaagaatgaccacttcattg |
435 |
Q |
| |
|
|||||||||||||| |||| |||||||||||| |||||||||||| |||| |||||||||||||||| |||||||| |||| |
|
|
| T |
14153503 |
-ggaacttctgtctcttaaaaaacaacccaaaagatttaccacatttatatggttgatttgggaaagaacgaccactttattg |
14153584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 9 - 175
Target Start/End: Original strand, 14153185 - 14153351
Alignment:
| Q |
9 |
gacatcactcttctctgttaattggcttgtgtggaagtattctgggtcaagataccccaatgttccctgcactagagtgtttatttgactatgatcaaga |
108 |
Q |
| |
|
|||| ||||||||||| |||| ||||| || |||||||||| |||||||||| |||||| ||||||| ||||||| |||| || |||||||||||| |
|
|
| T |
14153185 |
gacaacactcttctctattaagacacttgtttgcaagtattctgcatcaagatacctcaatgtcccctgcagtagagtggttatctggctatgatcaaga |
14153284 |
T |
|
| Q |
109 |
ggaacaatccttgaagctccaaagtcagaaacctttgcagtgagattatgatctaggagtatatttg |
175 |
Q |
| |
|
||||||||||||||||||| |||||| |||| |||||||||||||| ||||||| ||||||||||| |
|
|
| T |
14153285 |
ggaacaatccttgaagctctaaagtcgaaaacttttgcagtgagattgtgatctaagagtatatttg |
14153351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 250 - 440
Target Start/End: Complemental strand, 14155221 - 14155044
Alignment:
| Q |
250 |
tttgctattctcaatcttgttttccatgtaagcttcatagattgggtttcatcatgaatatgctcataaacagtaccattgggaataaattcgtaaacaa |
349 |
Q |
| |
|
||||| ||||||| |||||| ||||| |||||||| | ||||||| ||| |||||||| ||||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
14155221 |
tttgccattctcattcttgtattccaagtaagctttaaagattggttttgatcatgaagatgctcaaaaacagtaccattgagaataaattcgtaaaca- |
14155123 |
T |
|
| Q |
350 |
gtaacggaacttctgtctctaaacaacaacccaaaatctttaccacatttctatgattgatttgggaaagaatgaccacttcattgatgaa |
440 |
Q |
| |
|
| ||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
14155122 |
-----------tgtgtctctaagcaacaa-ccaaaagctttaccacatttctatgattgatttgggaaagaacaaccatttcattgatgaa |
14155044 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 250 - 440
Target Start/End: Original strand, 14022911 - 14023088
Alignment:
| Q |
250 |
tttgctattctcaatcttgttttccatgtaagcttcatagattgggtttcatcatgaatatgctcataaacagtaccattgggaataaattcgtaaacaa |
349 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | | ||||||| ||| |||||||| ||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
14022911 |
tttgctattctcaatcttgttttccatgtaagcgttaaagattggttttgatcatgaagatgctcataaacagtaccattggaaataaattcgtaa---- |
14023006 |
T |
|
| Q |
350 |
gtaacggaacttctgtctctaaacaacaacccaaaatctttaccacatttctatgattgatttgggaaagaatgaccacttcattgatgaa |
440 |
Q |
| |
|
||| | ||||||||||||| ||||||||| ||||| ||| |||| |||| ||||||||| |||||| |||| |||||||||||| |
|
|
| T |
14023007 |
------gaa--tgtgtctctaaacaaaaacccaaaagctttagcacctttcgatgactgatttggg-aagaataaccatttcattgatgaa |
14023088 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 316 - 441
Target Start/End: Complemental strand, 14023346 - 14023221
Alignment:
| Q |
316 |
taaacagtaccattgggaataaattcgtaaacaagtaacggaacttctgtctctaaacaa-caacccaaaatctttaccacatttctatgattgatttgg |
414 |
Q |
| |
|
|||| |||||||||| ||||||||| ||||||||||| |||||||||||| |||| || |||||||||| | ||||||||| |||||||||||| | |
|
|
| T |
14023346 |
taaagagtaccattgc-aataaattcataaacaagtaagagaacttctgtctttaaaaaaacaacccaaaagaatcaccacatttatatgattgattttg |
14023248 |
T |
|
| Q |
415 |
gaaagaatgaccacttcattgatgaac |
441 |
Q |
| |
|
||||||| |||||||| ||||| |||| |
|
|
| T |
14023247 |
gaaagaacgaccactttattgacgaac |
14023221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 14155364 - 14155316
Alignment:
| Q |
76 |
tgcactagagtgtttatttgactatgatcaagaggaacaatccttgaag |
124 |
Q |
| |
|
|||||||||||| || | ||||||||||||||||||||||||||||||| |
|
|
| T |
14155364 |
tgcactagagtggttttctgactatgatcaagaggaacaatccttgaag |
14155316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 39; Significance: 0.000000000001; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 322 - 416
Target Start/End: Original strand, 9229739 - 9229833
Alignment:
| Q |
322 |
gtaccattgggaataaattcgtaaacaagtaacggaacttctgtctctaaacaacaacccaaaatctttaccacatttctatgattgatttggga |
416 |
Q |
| |
|
||||||||| ||||||||| ||||| ||||| ||||||| |||||| |||||||| ||||| | || || |||||||||||||| |||||||| |
|
|
| T |
9229739 |
gtaccattgctaataaattcataaactagtaaaggaacttgtgtctccaaacaacatcccaagagtttgacaacatttctatgatttatttggga |
9229833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 355 - 516
Target Start/End: Complemental strand, 9118474 - 9118313
Alignment:
| Q |
355 |
ggaacttctgtctctaaacaacaacccaaaatctttaccacatttctatgattgatttgggaaagaatgaccacttcattgatgaacgactcaatctggt |
454 |
Q |
| |
|
||||||||||||||||||||||| || |||| || || ||||| |||||||| |||||||| ||||| || || ||||| ||||| ||| || || | |
|
|
| T |
9118474 |
ggaacttctgtctctaaacaacaccctaaaagtttgacaacattcctatgatttatttgggacagaataactacctcattaatgaattgctcgatttgat |
9118375 |
T |
|
| Q |
455 |
tcgggtcacttattttggacttttttattgctacaattctgttatcttgtaaaactcctttg |
516 |
Q |
| |
|
| | ||| ||||| |||||||||| | || || ||||||||||| |||||||||||||| |
|
|
| T |
9118374 |
ttgcgtctattattctggactttttgacagccacgattctgttatcgggtaaaactcctttg |
9118313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 355 - 421
Target Start/End: Original strand, 9161978 - 9162044
Alignment:
| Q |
355 |
ggaacttctgtctctaaacaacaacccaaaatctttaccacatttctatgattgatttgggaaagaa |
421 |
Q |
| |
|
||||||||||||||||||||||| ||||| | || || |||||||||||||| |||||||| |||| |
|
|
| T |
9161978 |
ggaacttctgtctctaaacaacatcccaagagtttgacaacatttctatgatttatttgggacagaa |
9162044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 355 - 521
Target Start/End: Original strand, 9200371 - 9200537
Alignment:
| Q |
355 |
ggaacttctgtctctaaacaacaacccaaaatctttaccacatttctatgattgatttgggaaagaatgaccacttcattgatgaacgactcaatctggt |
454 |
Q |
| |
|
|||||||||||||||| |||||| || | | || || ||||| |||||||| ||||||| |||| || || ||||| ||||| |||||| || | |
|
|
| T |
9200371 |
ggaacttctgtctctagacaacagcctaggagtttgacaacattcctatgatttatttgggtcagaacaactacctcattaatgaattgctcaatttgat |
9200470 |
T |
|
| Q |
455 |
tcgggtcacttattttggacttttttattgctacaattctgttatcttgtaaaactcctttgtaaac |
521 |
Q |
| |
|
| | |||| |||||||||| ||||||| || |||||| ||||||| ||||||||||||||||||| |
|
|
| T |
9200471 |
ttgcgtcaattattttggatttttttacagcgacaattttgttatcaggtaaaactcctttgtaaac |
9200537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 325 - 440
Target Start/End: Complemental strand, 1868516 - 1868401
Alignment:
| Q |
325 |
ccattgggaataaattcgtaaacaagtaacggaacttctgtctctaaacaacaacccaaaatctttaccacatttctatgattgatttgggaaagaatga |
424 |
Q |
| |
|
||||||| || |||||| ||||| | || ||||||||||||||||||||||| ||||| | || || ||||| |||||||| ||||| || |||| | |
|
|
| T |
1868516 |
ccattggtaacaaattcataaaccaacaaaggaacttctgtctctaaacaacaccccaagagtttgacaacattcctatgatttatttgagagagaacaa |
1868417 |
T |
|
| Q |
425 |
ccacttcattgatgaa |
440 |
Q |
| |
|
|||| ||||| ||||| |
|
|
| T |
1868416 |
ccacctcattaatgaa |
1868401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 325 - 422
Target Start/End: Complemental strand, 1842907 - 1842810
Alignment:
| Q |
325 |
ccattgggaataaattcgtaaacaagtaacggaacttctgtctctaaacaacaacccaaaatctttaccacatttctatgattgatttgggaaagaat |
422 |
Q |
| |
|
||||||| || |||||| ||||| | || ||||||||||||||||||||||| ||||| | || || ||||| |||||||| ||||| || ||||| |
|
|
| T |
1842907 |
ccattggtaacaaattcataaaccaacaaaggaacttctgtctctaaacaacaccccaagagtttgacaacattcctatgatttatttgagagagaat |
1842810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 355 - 416
Target Start/End: Original strand, 9156066 - 9156127
Alignment:
| Q |
355 |
ggaacttctgtctctaaacaacaacccaaaatctttaccacatttctatgattgatttggga |
416 |
Q |
| |
|
||||||||||||||||||||||| ||||| | || || |||||||| ||||| |||||||| |
|
|
| T |
9156066 |
ggaacttctgtctctaaacaacatcccaagagtttgacaacatttctgtgatttatttggga |
9156127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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